mRNA_H-paniculata_contig683.14749.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: A0A061RLJ4_9CHLO (Gamma-glutamylcyclotransferase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RLJ4_9CHLO) HSP 1 Score: 79.0 bits (193), Expect = 8.050e-14 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 2
Query: 299 VHGVLHSILPSDMERIEDVETGYRRCEVVVETYEGRQCC-AVCFISDPMQVLFTSVPPTIRYLSLLRDGASYHGLNDRYQSWLATVPSVQS 568
VHGVLH + +D R+ +E YR CEV E Y+G A+ F++ P +++ + +PPT RYL LL+ GA L+DRY SWL ++PS+ +
Sbjct: 103 VHGVLHLLSHADYCRLAAMEHEYRPCEVEAEPYDGGPPIKAIVFVTPPERLIRSGLPPTSRYLGLLQKGAPEWPLDDRYTSWLKSLPSIDN 193
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: A0A061SB69_9CHLO (Poly polymerase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SB69_9CHLO) HSP 1 Score: 79.3 bits (194), Expect = 6.560e-13 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 2
Query: 299 VHGVLHSILPSDMERIEDVETGYRRCEVVVETYEGRQCC-AVCFISDPMQVLFTSVPPTIRYLSLLRDGASYHGLNDRYQSWLATVPSVQS 568
VHGVLH + +D R+ +E YR CEV E Y+G A+ F++ P +++ + +PPT RYL LL+ GA L+DRY SWL ++PS+ +
Sbjct: 288 VHGVLHLLSHADYCRLAAMEHEYRPCEVEAEPYDGGPPIKAIVFVTPPERLIRSGLPPTSRYLGLLQKGAPEWPLDDRYMSWLKSLPSIDN 378
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: A0A8J4AT98_9CHLO (Gamma-glutamylcyclotransferase n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AT98_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 2.330e-12 Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 2
Query: 299 VHGVLHSILPSDMERIEDVETGYRRCEVVVETYEGRQCCAVCFISDPMQVLFTSVPPTIRYLSLLRDGASYHGLNDRYQSWLATVPSVQSEEAETRAERTNTPAK 613
VHGVL+ I D E++ E GY EV V+TY+G QC A+ F+S+PM L V PT +YL+ +R+GA + L+ YQ++L+ + +V A +E NTP+K
Sbjct: 214 VHGVLYRITREDFEKLAKREGGYVVQEVQVQTYDGSQCIALVFVSNPMFKLPQEVIPTEKYLARVREGARDNYLDPAYQAFLSGISTVPG--AGLGSEYYNTPSK 316
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: A0A1Y1HZF9_KLENI (RNA ligase/cyclic nucleotide phosphodiesterase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZF9_KLENI) HSP 1 Score: 75.9 bits (185), Expect = 1.040e-11 Identity = 37/97 (38.14%), Postives = 59/97 (60.82%), Query Frame = 2
Query: 290 SPG--VHGVLHSILPSDMERIEDVETGYRRCEVVVETYEGRQCC-AVCFISDPMQVLFTSVPPTIRYLSLLRDGASYHGLNDRYQSWLATVPSVQSE 571
SPG HG+LH + R+ ++E GY +V VE Y+GR AV F S P +++ +PP+ RYL+L++ GA GL+ Y +WL ++P+V ++
Sbjct: 322 SPGDACHGLLHQVTREQFNRLREMENGYSAVDVDVEPYDGRGSIRAVVFCSRPEELIQDGLPPSTRYLNLIKSGAKEWGLHPNYVAWLDSLPAVDAQ 418
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: A0A6V2TEL4_HETAK (Gamma-glutamylcyclotransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TEL4_HETAK) HSP 1 Score: 70.9 bits (172), Expect = 2.400e-10 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 2
Query: 260 SPGPHQGWEISPGVHGVLHSI-LPSDMERIEDVETGYRRCEVVVETYEGRQCC-AVCFISDPMQVLFTSVPPTIRYLSLLRDGASYHGLNDRYQSWLATVPSVQ 565
+P + + G HGVLH++ L + + VE+GYR + V+ Y + A F+S P+ L S+PP+ RYLSL++ GA H L + Y WL ++ S++
Sbjct: 161 APATREAQHVWQGAHGVLHAVPLEAVQGTLARVESGYRLRTITVQPYGCEELINAKAFVSSPLLKLSQSLPPSTRYLSLIKQGAKEHQLEESYIDWLYSIESIE 264
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: E1ZR30_CHLVA (Gamma-glutamylcyclotransferase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZR30_CHLVA) HSP 1 Score: 63.5 bits (153), Expect = 7.390e-8 Identity = 40/127 (31.50%), Postives = 56/127 (44.09%), Query Frame = 2
Query: 242 FATLTPSP------GPHQGWEISPGVHGVLHSILPSDMERIEDVETG--------YRRCEVVVETYEGRQCCAVCFISDPM---QVLFTSVPPTIRYLSLLRDGASYHGLNDRYQSWLATVPSVQSE 571
FA + P P G P VHGV H I PS + + E G Y+ E Y GR+ + P ++ P++RYL+L+RDGA +GL YQ+WLAT+ +E
Sbjct: 92 FAAVEPQPEEVEDAAASSGGARQPDVHGVAHRITPSQWAYVLETEGGSGGKEDHAYKVVEATAVDYSGRELVVLTLTVSPKIKARLQGRHALPSLRYLTLIRDGAKDYGLTPEYQAWLATLRHYTAE 218
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: A0A7C7XHR1_9PROT (Gamma-glutamylcyclotransferase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A7C7XHR1_9PROT) HSP 1 Score: 60.1 bits (144), Expect = 6.450e-7 Identity = 38/108 (35.19%), Postives = 53/108 (49.07%), Query Frame = 2
Query: 242 FATLTPSPGPHQGWEISPGVHGVLHSILPSDMERIEDVET---GYRRCEVVVETYEGRQCCAVCFISDPMQVLFTSVPPTIRYLSLLRDGASYHGLNDRYQSWLATVP 556
A + P+PG +HGVL + + E Y+ V V+ Y+GRQ AV F + P + L VPP++RYL LLR+GA GL+ Y WL +P
Sbjct: 64 MAGIDPAPGQ--------SMHGVLLRFNTESFKALLQSEGDGHAYQLEPVTVDAYDGRQIKAVAFRALPHRRLKEDVPPSLRYLKLLRNGARQSGLHPDYIKWLDALP 163
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: A0A6T8NMB5_HEMAN (Gamma-glutamylcyclotransferase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NMB5_HEMAN) HSP 1 Score: 58.5 bits (140), Expect = 3.660e-6 Identity = 40/129 (31.01%), Postives = 65/129 (50.39%), Query Frame = 2
Query: 236 AGFATLTPSPGPHQGWEISPGVHGVLHSILPSDMERIEDVETGYRRCEVVVETYEGRQCCAVCFISDPMQVLFTSVPPTIRYLSLLRDGASYHGLNDRYQSWLATVPSVQSEEAETRAERTNTPAKRAL 622
AGF + P+ + S +HGV + D E+++ +E GY + VVV Y+GR+ A + + T P+ RYL +L GA GL++ Y + LA +P+ + ET A R P+ ++L
Sbjct: 68 AGFDRVEPAFANAMQGDPSDEIHGVAIKLSLEDGEKMDRMEGGYAKKNVVVTAYDGREIKAYLYTREKEDK--TEYLPSKRYLDVLVSGAKAAGLDEHYTARLARLPTY-APTPETLALRKTLPSPQSL 193
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: A0A2P6VE67_9CHLO (Gamma-glutamylcyclotransferase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VE67_9CHLO) HSP 1 Score: 57.8 bits (138), Expect = 1.350e-5 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 2
Query: 293 PGVHGVLHSILPSDMERI--------EDVETGYRRCEVVVETYEGRQCCAVCF-ISDPMQVLFTS--VPPTIRYLSLLRDGASYHGLNDRYQSWL 544
P V+GVLH I PS + +D + GY+ EV TY+ R+ A+ +SD ++ P++RYL+L+R+GA+ +GL Y+ WL
Sbjct: 163 PDVNGVLHRITPSQWRYVLETEGTSGQDDDRGYKVVEVTARTYDRRELQALTLTVSDVVKARLQGRDALPSLRYLTLIREGAADYGLTPEYREWL 257
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Match: A0A2P6TYN4_CHLSO (Cytosolic Fe-S cluster assembly factor narfl n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TYN4_CHLSO) HSP 1 Score: 57.4 bits (137), Expect = 1.960e-5 Identity = 32/104 (30.77%), Postives = 50/104 (48.08%), Query Frame = 2
Query: 293 PGVHGVLHSILPSDMERIEDVET---------GYRRCEVVVETYEGRQCCAVCFISDPM---QVLFTSVPPTIRYLSLLRDGASYHGLNDRYQSWLATVPSVQS 568
P HGV+H I PS + + E GYR + Y+G+Q V P ++ + P++RYL+L+R+GA HGL Y++WL + Q+
Sbjct: 160 PDCHGVVHRITPSQWRYVLETEGASGEDNEDHGYRVVQATATCYDGKQLPVVTLTVPPKIKARLQGCTALPSLRYLTLIREGAEQHGLAPEYRAWLNELEHYQA 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig683.14749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig683.14749.1 >prot_H-paniculata_contig683.14749.1 ID=prot_H-paniculata_contig683.14749.1|Name=mRNA_H-paniculata_contig683.14749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp MERIEDVETGYRRCEVVVETYEGRQCCAVCFISDPMQVLFTSVPPTIRYLback to top mRNA from alignment at H-paniculata_contig683:4617..6959- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig683.14749.1 ID=mRNA_H-paniculata_contig683.14749.1|Name=mRNA_H-paniculata_contig683.14749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2343bp|location=Sequence derived from alignment at H-paniculata_contig683:4617..6959- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig683:4617..6959- >mRNA_H-paniculata_contig683.14749.1 ID=mRNA_H-paniculata_contig683.14749.1|Name=mRNA_H-paniculata_contig683.14749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at H-paniculata_contig683:4617..6959- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |