mRNA_H-paniculata_contig682.14740.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: D8LRU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI) HSP 1 Score: 332 bits (852), Expect = 3.560e-103 Identity = 173/328 (52.74%), Postives = 228/328 (69.51%), Query Frame = 1
Query: 28 DSSTRDYLNDLVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHFEGFGSRVDLHEAVAQT--KTSGERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLFNPKPNSKAQHRRLYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYDGKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVAS-DLVKFRELQKLVADYMEFNQTSLSKKLYKSLDIYHSNDCYDF 1002
+ + R YLN+LV SA T Q SN+AF+KTHKTASTT A LLYRYARRHN+KLAHF+ S + L EAV QT + R D+MHYH+S FG FE +WRQAE +YR+I+R + VNF+TV+REPRSHLLSYYY++LQP TQ++I EFL K HRRL+NPL+AEFG+K + L + +L K+VLLTE FDEGLMVLRR+L W+++D +Y++++KT AG RRYDGK L + P F+ L +VQQ ID+ T +D +LY A K ++EKR + + DLV+F ELQ+ V Y+ N TS + +YK+ +IY D F
Sbjct: 77 EPTNRSYLNNLVANSAAQTEGQLSNIAFIKTHKTASTTFAFLLYRYARRHNVKLAHFDDHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQFEGSWRQAEQAYRRILRNTKAVNFVTVVREPRSHLLSYYYYFLQPQTQKTIGEFLTQAKHPRDPIHRRLFNPLSAEFGVKKRQDLRYVLEKALPNAKMVLLTEEFDEGLMVLRRLLRWEMVDMTYVSVYKTTAGARRYDGKPLVNAPRFEDLPVQVQQIIDQHTELDRVLYNAAKLEYEKRRDLIPPPLLEEDLVEFHELQRTVGAYLVDNPTSKANAMYKTANIYAQEDASPF 404
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: A0A6H5JIK1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE) HSP 1 Score: 320 bits (819), Expect = 4.020e-99 Identity = 169/319 (52.98%), Postives = 225/319 (70.53%), Query Frame = 1
Query: 22 IADSSTRDYLNDLVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHFEGFGSRVDLHEAVAQTKTSGERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLFNPKPNSKAQHRRLYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYDGKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVASDLVKFRELQKLVADYMEFNQTSLSKKLYKSLDIY 978
+ S R YLN LV + L Q +NVAFVKTHKTASTT+AS++YRYA RH+LKL++F G S DL A +TK +G+RVD+MHYH+S G + TW +A YR IMR D +NF+TVLREPRSHLLSYYY++LQP QQSIEEFL + N+ +HR L NPL+AEFG++ E ++ FIS++L FKLVL+ R DEGL+ L RML+W +ID +Y L +T+ G RR+DGK + P FDSL +VQ ID LT +D +LYEAGK +FEKRL P +V D+ +F+ELQ ++ DY+ N +SL+ ++Y ++ IY
Sbjct: 25 VGPQSRRGYLNQLVEATTLDHGNQVTNVAFVKTHKTASTTVASIMYRYAARHHLKLSYFGG-SSVTDLRSAANETKENGQRVDLMHYHISPRGQYMGTWNEAVTHYRVIMRNPDDINFVTVLREPRSHLLSYYYYFLQPLHQQSIEEFLLSGHRNN-IEHRMLSNPLSAEFGVRTAEEMDSFISSALPDFKLVLM--RLDEGLLTLGRMLHWHMIDLTYCDLNETKEGSRRWDGKTVVTWPQFDSLPKQVQNKIDDLTRLDRVLYEAGKDEFEKRLAPYASSVQEDIPQFQELQGVIKDYLNGNSSSLAYQMYLNMHIY 339
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE) HSP 1 Score: 313 bits (802), Expect = 1.860e-96 Identity = 165/325 (50.77%), Postives = 218/325 (67.08%), Query Frame = 1
Query: 16 PHIADSSTRDYLNDLVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHF-EGFGSRVDLHEAVAQTKTSGERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLFNPKPNSKAQHRRLYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYDGKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVASDLVKFRELQKLVADYMEFNQTSLSKKLYKSLDIYHSN 987
P + +LNDLV SA Q +NV FVKTHKT STTLA++ YRYA RH LKLAHF +G G+ +L +A QT+ SGE VDVMHYH+S G++ TW QAE +R+IMR D +N++TVLREPRSHLLS YYFY+ P + SIE++L +P RL NPL+AEFG+K + + FI L FKLV+LTER DE L++LR +L W +ID +Y +L TRAG RRYDGK L D P F L EVQ ID+LT +D LY+AGKK+FEKRL + ++L F+ELQ V Y+E N + L++++Y+S+D +++
Sbjct: 28 PRTSSGELAGHLNDLVEASARDADNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGKGKGTIANLKKAATQTRKSGELVDVMHYHISHSGEYTGTWPQAENYFRRIMRHPDSINYVTVLREPRSHLLSCYYFYIFPECELSIEDYLMDPAHAGDENRHRLRNPLSAEFGVKTAKEMNTFIVNHLPDFKLVMLTERMDESLVLLRSLLGWHMIDVTYASLNATRAGARRYDGKPLIDRPDFCHLSEEVQARIDELTILDQALYDAGKKEFEKRLSSTSTSFQAELAGFQELQDNVCTYLEGNSSGLAREMYRSMDAVYTD 352
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI) HSP 1 Score: 290 bits (743), Expect = 5.220e-88 Identity = 155/313 (49.52%), Postives = 208/313 (66.45%), Query Frame = 1
Query: 31 SSTRDYLNDLVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHFEG-FGSRVDLHEAVAQTKTSGERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLFNPK--PNSKAQHRRLYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYDGKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVASDLVKFRELQKLVADYMEFNQTSLSKKLY 960
S R YLN LV ++A +T QQ N+AF KTHKTASTT+A +L RYARRH++KLA F G S + L EAV Q + SGERVDVMHYH + +G F+ W +A+ Y +IMR+ + +N+ITV+R RSH LSYYY+Y+QP Q S++ F + + P + Q RRL NPL AEFGI N E L FI T L F+LVLLTE FDEGLM++RR+L W++ID +Y + +T+AGG R+DGK+L +VPH++ L VQ +D T +D MLY+A + K + DL +F ELQK V Y+ N +S + + Y
Sbjct: 14 SRERAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNRQDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGARWDGKELKNVPHWEDLPTWVQDRVDANTALDKMLYDAAVSHYNKMKAVAAMEIEDDLKEFDELQKTVNGYLALNSSSEAIRWY 326
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE) HSP 1 Score: 288 bits (738), Expect = 7.410e-85 Identity = 153/313 (48.88%), Postives = 209/313 (66.77%), Query Frame = 1
Query: 31 SSTRDYLNDLVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHFEG-FGSRVDLHEAVAQTKTSGERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLFNPK--PNSKAQHRRLYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYDGKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVASDLVKFRELQKLVADYMEFNQTSLSKKLY 960
S R YLN LV ++A +T QQ N+AF KTHKTASTT+A +L RYARRH++KLA F G S + L EAV Q + SGERVDVMHYH + +G F+ W +A+ Y +IMR+ + +N+ITV+R RSH LSYYY+Y+QP Q S++ F + + P + Q RRL NPL AEFGI N E L FI T L F+LVLLTE FDEGLM++RR+L W++ID +Y + +T+AGG R+DGK+L +VP ++ L VQ +D T +D MLY+A + + + + DL +F ELQK+V Y+ N +S + + Y
Sbjct: 203 SRERAYLNGLVEETAAATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTTYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNREDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGTRWDGKELKNVPRWEDLPTWVQDRVDANTALDKMLYDAAVRHYNQMKAVAAIEIEDDLKQFEELQKVVNGYLALNSSSEAIRWY 515
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI) HSP 1 Score: 266 bits (680), Expect = 2.840e-77 Identity = 147/314 (46.82%), Postives = 196/314 (62.42%), Query Frame = 1
Query: 40 RDYLNDLVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHFEGFGSRVDLHEAVAQTKTSGERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLFNPKPNSKAQHRRLYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYDGKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVASDLVKFRELQKLVADYMEFNQTSLSKKLYKS-LDIY 978
RDYLN LV SA ++Q SN+AF+KTHKTASTTLAS+LYRY RH+ +A F+ G+ VDL A Q G+RVD+MHYH + G + TW QA Y +IM VN++TVLREP +H LSYYY++L P + I+E+L P+ K LYNPLAAEFGI++M + FI + FK+VLLTERFDEGL +L+RML WD ID +Y + +T+ G R+DGK L +VP L PE+ HI T +D+ LY+AG + K V F+ +QK++ Y+E N +S + K Y +DIY
Sbjct: 144 RDYLNGLVYDSASKRTEQLSNIAFIKTHKTASTTLASILYRYGMRHDSNIAKFDQGGTYVDLDVASKQVAKQGKRVDIMHYHHAWNGFYSGTWDQATAKYAKIMSNQADVNYVTVLREPVAHYLSYYYYFLNPINKMPIDEYLLK-NPHKKL----LYNPLAAEFGIEDMAQMNHFIKKQMPKFKMVLLTERFDEGLALLQRMLQWDPIDMTYCKMLQTKKGEMRWDGKPLENVPKISDLAPEILSHIKARTQLDSRLYQAGTLLYRKYKLEFGPGVDEHFQAFQGVQKVMHRYLEMNTSSDALKWYVGDVDIY 452
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: D7G4H5_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H5_ECTSI) HSP 1 Score: 255 bits (651), Expect = 5.580e-75 Identity = 143/302 (47.35%), Postives = 199/302 (65.89%), Query Frame = 1
Query: 58 LVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHFEG-FGSRVDLHEAVAQTKTSGERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLFNPKPNSKAQHRRLYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYDGKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVASDLVKFRELQKLVADYMEFNQTSLSKKLY 960
+V +SA T Q NVAFVKTHKTASTTLA + RYA+RH+ KLA FEG F S V L AV Q + +G+RVDVMHYH+ G +E TW Y+QIM++++P+N+ITV+R PR H LSYYY+Y+QP + SIE++L K + AQH + NP+ EFG+ + + L+ FI L +F LV+LTE FD GLM LRR++ WD+ID +Y + +T+ G R+D K L DVP F SL VQ ID T +D L+EA + + + G+ DLV+F+ELQ++V Y++ N +S +++ Y
Sbjct: 1 MVTESAGKTGGQMCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQENGQRVDVMHYHVHE-GVWEGTWEDNTKMYKQIMQEAEPINYITVVRSPREHFLSYYYYYMQPMNKLSIEQYLERTKRHP-AQH--MMNPMCVEFGVHDKDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVRWDNKPLVDVPRFASLPQWVQDTIDATTALDRKLHEAAVLAYRQAAEV--GDAEQDLVEFKELQRIVTAYLQANSSSEARRWY 296
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: D8LK91_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK91_ECTSI) HSP 1 Score: 254 bits (648), Expect = 3.970e-74 Identity = 145/331 (43.81%), Postives = 203/331 (61.33%), Query Frame = 1
Query: 22 IADSSTRDYLNDLVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHFEGFGSRVDLHEAVAQTKTSGERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLF------NPKPNSKAQHRR-----------LYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYDGKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVASDLVKFRELQKLVADYMEFNQTSLSKKLYK 963
+A ++ R+YLN LV +S +T QT N+AFVKTHKTASTT A+LLYRY +RH+L +AHF G S ++L EA+ + SG+ VD+MHYH + G +E W +A+ +Y++IMR VN +TV+REP +H +SYYY++LQP T SI E+ +P+ Q RR L+NPL AEFGI+ LE FI L F +VLLTE F+EGL V RM NW ID ++ + +T+AG RYDGKKL++VP L PEV I + T +D LY+A K + ++ + ++ D+ R +Q V Y+EFN S + K Y+
Sbjct: 1 MAGNAMREYLNLLVDESVAATKNQTCNIAFVKTHKTASTTAATLLYRYGKRHDLNVAHFHGHQSSIELPEAI---EDSGKPVDLMHYHHAWDGFYEGGWAEAKAAYKKIMRDPTKVNLVTVMREPVAHYMSYYYYFLQPETGLSIAEYFELSAKPGDPRYRGVFQRRRAGKAGWHGFKLLHNPLCAEFGIRTATELESFIRDDLQGFAMVLLTEHFEEGLAVFMRMFNWRPIDMTFCRVIETKAGVSRYDGKKLTNVPKTRDLPPEVLAQIKQQTQLDQALYKAAVKVYLQKRAEYQDSLEVDVRSIRTVQSAVHGYLEFNAKSPAHKWYE 328
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: A0A6H5JMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW5_9PHAE) HSP 1 Score: 250 bits (638), Expect = 2.920e-71 Identity = 147/323 (45.51%), Postives = 202/323 (62.54%), Query Frame = 1
Query: 1 GTLVIPHIADSSTRDYLNDLVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHFEGFGSRVDLHEAVAQTKTS--GERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLFNPKPNSKAQHRRLYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYD-GKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVASDLVKFRELQKLVADYMEFNQTSLSKKLY 960
G+ IP A + RDYLN LV SA + +Q SN+A KTHKT STTLA LL+RY RRH+L++AHF GFGS + + EA QT + G+RVD+MHYH+ + W A+ YR +MR D +NFIT+LR+PR LLS+Y F+++ T I+EF P+ + RL + EFG+ LEDFI + FKLVL+TERFDE LMV+R +L WD++D +Y+++ R+ GR+ G VP FD L +VQ+ ID+LT +D LY+AG FE+ L P V +DL FRELQ +V +Y+ N +S ++ LY
Sbjct: 123 GSQAIPTDA-AGQRDYLNGLVAASAENKDEQLSNLALFKTHKTGSTTLAILLHRYGRRHDLEVAHFPGFGSTIPIEEAARQTGLADDGKRVDIMHYHIDTDTPRQERWGSAKEHYRDVMRYPDDINFITILRDPRDWLLSFYSFFVEFETGVPIDEFFRQDAPDEEVL-ERLRDLGCKEFGVATETELEDFIDQEIPEFKLVLVTERFDESLMVMRSLLGWDLVDMTYVSV--NRSSGRKGKFGVSKERVP-FDHLPEDVQEKIDELTTLDRRLYDAGVAAFEESLAPFTAQVDADLEGFRELQTVVNEYLRDNPSSPAQALY 440
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Match: A0A6G6CDJ0_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDJ0_SACJA) HSP 1 Score: 247 bits (630), Expect = 1.630e-70 Identity = 133/314 (42.36%), Postives = 200/314 (63.69%), Query Frame = 1
Query: 40 RDYLNDLVLKSALSTSQQTSNVAFVKTHKTASTTLASLLYRYARRHNLKLAHFEGFGSRVDLHEAVAQTKTS-GERVDVMHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYFYLQPNTQQSIEEFLFNPKPNSKAQHRRLYNPLAAEFGIKNMEHLEDFISTSLVTFKLVLLTERFDEGLMVLRRMLNWDIIDTSYLTLFKTRAGGRRYDGKKLSDVPHFDSLRPEVQQHIDKLTYMDTMLYEAGKKQFEKRLKPLEGNVASDLVKFRELQKLVADYMEFNQTSLSKKLYKSLDIY 978
RDYLN LV S +T Q N+AF T++T ST++A +LYRYA RHNLKLA G S VD Q + ERVD+MHYH+S G + W A +YR IMR+ D VN +T++REPR H +SYYY++++P T+ S+E+FL K + L NPLA+E G+ ++E +F+++LLT+RFDEGLMVLRR+L W +ID +Y+ + +T+AG + D P F L +V+ ID LT +D M+Y A + ++KRL+P+ + +D+ +F++LQK+V+ Y++ NQ+S + +Y++ D+Y
Sbjct: 109 RDYLNGLVEASVATTDHQEGNIAFANTYQTGSTSMAGILYRYAVRHNLKLARV-GQESAVDPKWFATQVQQGKSERVDIMHYHISNKGHLKGLWPGARENYRGIMREPDNVNLLTMMREPREHFISYYYYFVEPATKLSLEDFLM--KSHGGDDFALLKNPLASEVGVTTFHNMEQLFVNDFSSFRMILLTDRFDEGLMVLRRLLGWSMIDMTYMAMDETKAGDIA-----VVDRPSFHDLPEKVRNKIDSLTELDQMVYSAAQVLYDKRLRPMSDVIGADVEEFQKLQKVVSGYLDANQSSKANAMYRAEDVY 414 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig682.14740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig682.14740.1 >prot_H-paniculata_contig682.14740.1 ID=prot_H-paniculata_contig682.14740.1|Name=mRNA_H-paniculata_contig682.14740.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp MHYHMSVFGDFESTWRQAEMSYRQIMRKSDPVNFITVLREPRSHLLSYYYback to top mRNA from alignment at H-paniculata_contig682:23506..31935- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig682.14740.1 ID=mRNA_H-paniculata_contig682.14740.1|Name=mRNA_H-paniculata_contig682.14740.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8430bp|location=Sequence derived from alignment at H-paniculata_contig682:23506..31935- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig682:23506..31935- >mRNA_H-paniculata_contig682.14740.1 ID=mRNA_H-paniculata_contig682.14740.1|Name=mRNA_H-paniculata_contig682.14740.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig682:23506..31935- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |