mRNA_H-paniculata_contig6816.14734.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: D7FQ73_ECTSI (DNA double-strand break repair rad50 ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ73_ECTSI) HSP 1 Score: 254 bits (650), Expect = 2.130e-75 Identity = 136/172 (79.07%), Postives = 146/172 (84.88%), Query Frame = 1
Query: 1 LAEHLGVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMDGERVVKRATARAADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALTHGRTTDDEQSGLAGPQAIYSTIL----DLPAEELQESFDRIDQVVK 504
LAEHLG+RGVQNFVFRDAVNQL+AN RYLD LSDGALQLHL M+G+RVVKRA+ RAADG FRDRSLSQLSGGQWRR+SLALELAF ELARQR RF CN+LVLDEVLSQLDSYGR RVA+MLRALTHGR E S A+YSTIL DLP+EELQESFD IDQVVK
Sbjct: 1456 LAEHLGMRGVQNFVFRDAVNQLEANVARYLDALSDGALQLHLPMEGDRVVKRASVRAADGRFRDRSLSQLSGGQWRRASLALELAFIELARQRGRFSCNLLVLDEVLSQLDSYGRERVASMLRALTHGRNAGKE-SDFGPTHAMYSTILVILQDLPSEELQESFDAIDQVVK 1626
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: A0A6H5KB20_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB20_9PHAE) HSP 1 Score: 253 bits (646), Expect = 7.370e-75 Identity = 136/172 (79.07%), Postives = 146/172 (84.88%), Query Frame = 1
Query: 1 LAEHLGVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMDGERVVKRATARAADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALTHGRTTDDEQSGLAGPQAIYSTIL----DLPAEELQESFDRIDQVVK 504
LAEHLG+RGVQNFVFRDAVNQL+AN RYLD LSDGALQL LSM+G+RVVKRA+ RAADG FRDRSLSQLSGGQWRR+SLALELAF ELARQR RF CN+LVLDEVLSQLDSYGR RVA+MLRALTHGR E S A+YSTIL DLP+EELQESFD IDQVVK
Sbjct: 1468 LAEHLGMRGVQNFVFRDAVNQLEANVARYLDALSDGALQLRLSMEGDRVVKRASVRAADGRFRDRSLSQLSGGQWRRASLALELAFIELARQRGRFSCNLLVLDEVLSQLDSYGRERVASMLRALTHGRHAGKE-SNFGPTHAMYSTILVILQDLPSEELQESFDAIDQVVK 1638
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: A0A836CHZ6_9STRA (Metallophos domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ6_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.710e-41 Identity = 101/214 (47.20%), Postives = 123/214 (57.48%), Query Frame = 1
Query: 22 RGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMDGERVVKRATARAADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALT---------HGRTTDD------------------------------EQSG----------LAGPQAIYSTIL----DLPAEELQESFDRIDQVVK 504
R QNFVFR+ V QL+A +LD LSDG LQL L++DGERV+KRA +DG R+RSLSQLSGGQWRR SL+LELAFAELARQR CN++VLDEVLSQLD+ GRARVA +LR L+ H TD + +G L YST+L DLPAE++ +SFD +D+VVK
Sbjct: 1491 RAPQNFVFREGVEQLEAFAACFLDALSDGGLQLSLNLDGERVIKRAEVIGSDGQRRERSLSQLSGGQWRRVSLSLELAFAELARQRCGLACNVVVLDEVLSQLDANGRARVAQLLRHLSAEMHYRGLLHPTHTDIGHPIHRLCFLLIRNGGHSSRRLVSSAAAQLDANGRARVAHLLRRLVAADGGYSTVLVILQDLPAEQIIDSFDAVDEVVK 1704
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: A0A4D9DAR7_9STRA (Metallophos domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAR7_9STRA) HSP 1 Score: 153 bits (386), Expect = 6.940e-40 Identity = 87/179 (48.60%), Postives = 110/179 (61.45%), Query Frame = 1
Query: 1 LAEHLGVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMDGERVVKRATARAADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALTHGRTTDDEQSGLA-----------GPQAIYSTILDLPAEELQESFDRIDQVVK 504
L + G+RG+Q FV R AV QL+ +L VLS+G L+L LS++GER+ K R DG F DR+LS LSGGQWRR+SLA LAF EL+R RSR CN++VLDEVL+ LD GRARV +LRA+ E S A G Q + D A EL+++FD ID+VVK
Sbjct: 1158 LVDRFGMRGIQAFVLRGAVAQLERLANHFLTVLSEGGLRLGLSLEGERISKEVKVRGGDGVFHDRTLSHLSGGQWRRASLAALLAFRELSRLRSRVDCNLIVLDEVLNHLDGAGRARVGKLLRAMVQTEGDGQEHSTPARIQMGCLSARPGLQTAIVILQDSAAIELEDTFDSIDEVVK 1336
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: A0A7S1GJC3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJC3_CYCTE) HSP 1 Score: 142 bits (359), Expect = 1.960e-39 Identity = 82/173 (47.40%), Postives = 114/173 (65.90%), Query Frame = 1
Query: 1 LAEHLGVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMD-GERVVKRATARAADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALTHGRTTDDEQSGLAGPQAIYSTIL----DLPAEELQESFDRIDQVVK 504
L + LG RGVQ FV ++AV L++ T YL+ LSDG+L+L + +D G+R+ ++A RA DG++ +R LS LSGGQWRR S+AL L F +L +R + +++VLDE L+ LD GR+ V ++L+AL DD S G STI+ DL AEEL+ESFD ID+VVK
Sbjct: 56 LTDSLGHRGVQTFVLQNAVEALESTTQSYLNELSDGSLKLEMELDAGDRISRKAHIRAPDGSYTERPLSSLSGGQWRRFSIALNLGFVDLVARRGQMRPSLMVLDEPLTHLDRSGRSSVGSLLKALLRN---DDSLSHRIGKGITASTIMLILQDLSAEELEESFDHIDEVVK 225
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: A0A7S4JM63_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JM63_9STRA) HSP 1 Score: 140 bits (352), Expect = 5.900e-37 Identity = 81/173 (46.82%), Postives = 112/173 (64.74%), Query Frame = 1
Query: 1 LAEHLGVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMD-GERVVKRATARAADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALTHGRTTDDEQSGLAGPQAIYSTIL----DLPAEELQESFDRIDQVVK 504
LA+ G RGVQ ++ +AV+ L T +LD LSDGA++L L +D G+R+ + R ADGT+++R+LS LSGGQWRR SLAL L F++L +R R ++LVLDE L+ LD+ GRA V +LR + + + G + STIL DL AEEL+ESFD ID+V+K
Sbjct: 200 LADAFGPRGVQTYILENAVHALGFYTQSFLDELSDGAIKLDLELDAGDRIARTVAVRGADGTWQERTLSSLSGGQWRRCSLALSLGFSDLVARRGRLRPSLLVLDEPLTHLDASGRAHVGMILRKMISNQPAE-----YGGRLSEVSTILIILQDLAAEELEESFDSIDEVIK 367
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: A0A7S3V904_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V904_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.900e-35 Identity = 81/175 (46.29%), Postives = 115/175 (65.71%), Query Frame = 1
Query: 4 AEHLGVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMD-GERVVKRATARAADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALTHGRTT---DDEQSGLAGPQAIYSTIL----DLPAEELQESFDRIDQVVK 504
AE+ G RGVQ F+ ++ V+ LQ + YLD LSDG L+L L++D G+++ + A+ +++G++ R LS LSGGQWRR SLAL L F++L +R + C ++LVLDE L+ LDS GR V +LR + + + D E+ + G STIL DL AEEL ESFD+ID+VVK
Sbjct: 1261 AENFGARGVQTFILQNTVHALQLASQSYLDELSDGTLKLQLNLDAGDKITRTASVLSSNGSWISRPLSSLSGGQWRRCSLALSLGFSDLVARRGKLCSSLLVLDEPLTHLDSSGRDNVGKLLRKVVQKQASEQFDGEKKRIGGLSV--STILIILQDLVAEELSESFDKIDEVVK 1433
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: A0A8J9SJ08_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SJ08_PHATR) HSP 1 Score: 136 bits (343), Expect = 2.140e-34 Identity = 80/169 (47.34%), Postives = 106/169 (62.72%), Query Frame = 1
Query: 1 LAEHLGVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMD-GERVVKRATARAADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALTHGRTTDDEQSGLAGPQAIYSTILDLPAEELQESFDRIDQVVK 504
L++ G RGVQ FV + + LQ T +LD SDG +L LS+D G+R+ +RA R+ DG + +R L+ LSGGQWRR SLAL L +A+L +R RF ++ ++DE L+ LD GRA V + R L TT E GLA P I + DL AEEL E+FD ID+VVK
Sbjct: 440 LSDAFGQRGVQAFVLQSEIEILQTLTQSFLDDFSDGTQKLSLSLDAGDRISRRAYVRSPDGAYHERPLASLSGGQWRRCSLALNLGYADLVARRGRFRSSLYIMDEPLTHLDRSGRADVGRVFRKLLRRSTTSGE-GGLA-PSTIIVILQDLAAEELGEAFDCIDEVVK 606
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: A0A7S2KQL9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KQL9_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.400e-34 Identity = 86/181 (47.51%), Postives = 116/181 (64.09%), Query Frame = 1
Query: 1 LAEHLGVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMD-GERVVKRATARAADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALTHGRTT-----DDEQSG---LAGPQAIYSTIL----DLPAEELQESFDRIDQVVK 504
L+E G +GVQ FV ++AV LQ ++ RYLD LSDG +L LS++ G+R+ ++A DG + R LS LSGGQWRR SLAL L FAEL +R R ++LVLDE L+ LD+ GR+ V ++LR + GR + D E+ L + + STIL DL AEEL+E+FDRID+V K
Sbjct: 356 LSEIFGSKGVQTFVLQNAVFALQLSSQRYLDELSDGTQRLELSLEAGDRIFRKAAVLGQDGQWMQRPLSALSGGQWRRCSLALTLGFAELVARRGRLRPSLLVLDEPLTHLDATGRSYVGSLLRRMLCGRLSGSHDDDGEEMNINRLCSSERL-STILVILQDLAAEELEEAFDRIDEVKK 535
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Match: A0A7S2V9T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9T6_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.930e-34 Identity = 80/165 (48.48%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 16 GVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMD-GERVVKRATAR-AADGTFRDRSLSQLSGGQWRRSSLALELAFAELARQRSRFCCNILVLDEVLSQLDSYGRARVAAMLRALTHGRTTDDEQSGLAGPQAIYSTILDLPAEELQESFDRIDQVVK 504
G RGVQ+FVFR+A++ LQ+ YL LS+G QL LS+D G+R+V+RA + ++ G R R L+ LSGGQWRR +LA++L FAEL +R ++LV+DE L+ LD GR RV ++LR L G QS I + DL AEEL+ESFD ID VVK
Sbjct: 120 GQRGVQSFVFRNALDSLQSMAQLYLTELSEGTQQLELSVDEGDRIVRRAYVKNSSTGESRQRPLASLSGGQWRRCALAVQLGFAELVARRGILRSSLLVMDEPLTHLDRGGRTRVGSVLRGLLGGSKPLSLQSS-----TIVLILQDLAAEELEESFDAIDVVVK 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6816.14734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6816.14734.1 >prot_H-paniculata_contig6816.14734.1 ID=prot_H-paniculata_contig6816.14734.1|Name=mRNA_H-paniculata_contig6816.14734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp LAEHLGVRGVQNFVFRDAVNQLQANTGRYLDVLSDGALQLHLSMDGERVVback to top mRNA from alignment at H-paniculata_contig6816:9328..11386- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6816.14734.1 ID=mRNA_H-paniculata_contig6816.14734.1|Name=mRNA_H-paniculata_contig6816.14734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2059bp|location=Sequence derived from alignment at H-paniculata_contig6816:9328..11386- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6816:9328..11386- >mRNA_H-paniculata_contig6816.14734.1 ID=mRNA_H-paniculata_contig6816.14734.1|Name=mRNA_H-paniculata_contig6816.14734.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig6816:9328..11386- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |