mRNA_H-paniculata_contig6803.14722.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 260 bits (665), Expect = 4.710e-78 Identity = 144/277 (51.99%), Postives = 176/277 (63.54%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFGKNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGTGNFPIQTRSVVTVSVVR-E*PWPLGCSFRLEF-RKSF*NVEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQKR--WYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWVWKDNVMNGTMDALK-VPNDRDFSAGEYKDAVEGDGVMLQEYLDIAAECSEFM 892
MT MFMEWL+ L PAF+A +G NKKMILVLDNASYHHGYD EVGVPE+++K N LLR Y+ + V+ G +++K Y FQ+ TG FP Q S V E F+L+ K VE FM+ R W+LIWTPPYM SFQPIELFWQHGKQY+SFNFK+ MA+V Q R WYGD T EGQ G WK DCSKLV+HA+K+MN+WV D V+ G M AL+ +P + A + D V DGV QE L+++AE E M
Sbjct: 372 MTDKMFMEWLERRLAPAFKAKYG-NKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTSSAGVRSKK----YTFQVPATGTFP-QANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIELFWQHGKQYVSFNFKTKRTMAEVWAQVRKGWYGDPTWEGQKGGWKPADCSKLVAHAVKEMNKWVASDPVLRGQMGALEEIPESYEDDAPGHNDIVHDDGVEAQEQLELSAEFMECM 642
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE) HSP 1 Score: 217 bits (552), Expect = 1.750e-62 Identity = 127/271 (46.86%), Postives = 161/271 (59.41%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFG-KNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGT--GNFPIQTR----SVVTVSVVRE*PWPLGCSFRLEFRKSF*NVEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQ--KRWYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWVW-KDNVMNGTMDALKVPNDRDFS-AGEYKDAVEGDGVMLQE 856
MT MFMEWL++ L PA+ A K K+MILVLDNASYHHG+D EV VPET+TK N+ LLR + A S++V + ++ +GVV YN ++ +FP R S V+ L RLE R V FM + W LIWTPPYM SFQPIELFWQHGKQY+S NF+ M +V Q K WYGD+ GQ G WKA DCSKLV HAI +MN+WV +D V++GT+ +L+ P+ D D EG G +Q+
Sbjct: 267 MTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRV-------RRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEER-----VVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQ 525
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 218 bits (556), Expect = 3.290e-62 Identity = 128/271 (47.23%), Postives = 162/271 (59.78%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFG-KNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGT--GNFPIQTR----SVVTVSVVRE*PWPLGCSFRLEFRKSF*NVEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQ--KRWYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWVW-KDNVMNGTMDALKVPNDRDFS-AGEYKDAVEGDGVMLQE 856
MT MFMEWL++ L PA+ A K K+MILVLDNASYHHG+D EV VPET+TK N+ LLR + A S++V + ++ +GVV YNF++ +FP R S V+ L RLE R V FM + W LIWTPPYM SFQPIELFWQHGKQY+S NF+ M +V Q K WYGD+ GQ G WKA DCSKLV HAI +MN+WV +D V++GT+ +L+ P+ D D EG G +Q+
Sbjct: 368 MTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRV-------RRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEER-----VVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVPPVGDVEEGVGEQIQQ 626
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE) HSP 1 Score: 210 bits (534), Expect = 1.280e-61 Identity = 122/269 (45.35%), Postives = 158/269 (58.74%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFG-KNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGTGNFPIQTR----SVVTVSVVRE*PWPLGCSFRLEFRKSF*NVEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQ--KRWYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWVW-KDNVMNGTMDALKVPNDRDFS-AGEYKDAVEGDGVMLQE 856
MT MFMEWL++ L PA+ A K K+MILVLDNASYHHG+D +V +PE++TK N+ LLR + A S++V K ++ +GV ++ +FP R S V+ L RLE R V FM + W LIWTPPYM SFQPIELFWQHGKQY+S NF+ M +V Q K WYGD+ GQ G WKA DCSKLV HAI +MN+WV +D V++GT+ +L+ P+ D D EG G +Q+
Sbjct: 98 MTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRV-------KRKEGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEER-----VVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQ 354
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 216 bits (550), Expect = 2.910e-61 Identity = 127/271 (46.86%), Postives = 161/271 (59.41%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFG-KNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGT--GNFPIQTR----SVVTVSVVRE*PWPLGCSFRLEFRKSF*NVEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQ--KRWYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWVW-KDNVMNGTMDALKVPNDRDFS-AGEYKDAVEGDGVMLQE 856
MT MFMEWL++ L PA+ A K K+MILVLDNASYHHG+ EV VPET+TK N+ LLR + A S++V + ++ +GVV YNF++ +FP R S V+ L RLE R V FM + W LIWTPPYM SFQPIELFWQHGKQY+S NF+ M +V Q K WYGD+ GQ G WKA DCSKLV HAI +MN+WV +D V++GT+ +L+ P+ D D EG G +Q+
Sbjct: 378 MTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRV-------RRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEER-----VVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQ 636
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: A0A6H5LE74_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE74_9PHAE) HSP 1 Score: 212 bits (539), Expect = 3.970e-61 Identity = 118/265 (44.53%), Postives = 157/265 (59.25%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFGKNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGTGNFPIQTRSVVTVSVVRE*PWPLGCSFRLEFRKSF*N-----VEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQKR--WYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWV--WKDNVMNGTMDALKVPNDRDFSAGEYKDAVEGDGV 844
MT GMFM+WLK+ L PAF+A F KNKKM LVLDNASYHH +D+EV VPET++K N++LLR Y S +V R++ YNF++ G+ P R V +E + R F+K+F E +M ++ W LIWTPPYM +FQPIELFWQHGK Y+S +F+ NM V +Q R WYGD +GQ G WKA DC KLV H I M+EW+ + N ++GT+ +L+ P EY++A D +
Sbjct: 217 MTDGMFMQWLKHRLTPAFDAQF-KNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVT--------RESEGKAAEYNFEVPAQGSLPNANRKN---GVSKE---EIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAADCGKLVQHTIGKMDEWIGLYGGN-LSGTIGSLEYP------VAEYQEATAEDEI 459
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 210 bits (534), Expect = 5.040e-60 Identity = 117/265 (44.15%), Postives = 158/265 (59.62%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFGKNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGTGNFPIQTRSVVTVSVVRE*PWPLGCSFRLEFRKSF*N-----VEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQKR--WYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWV--WKDNVMNGTMDALKVPNDRDFSAGEYKDAVEGDGV 844
MT GMFM+WLK+ L PAF+A F KNKKM LVLDNASYHH +D+EV VPET++K N++LLR Y S +V R++ YNF++ G+ P R V +E + R F+K+F E +M ++ W LIWTPPYM +FQPIELFWQHGK Y+S +F+ N+ V +Q R WYGD +GQ G WKA +C KLV HAI M+EW+ + N ++GT+ +L+ P EY++A D +
Sbjct: 255 MTDGMFMQWLKHRLTPAFDAQF-KNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVT--------RESEGKAAEYNFEVPAQGSLPNANRKN---GVSKE---EIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGN-LSGTIGSLEYP------VAEYQEATAEDEI 497
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: A0A6H5KL68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL68_9PHAE) HSP 1 Score: 206 bits (525), Expect = 9.510e-59 Identity = 116/265 (43.77%), Postives = 156/265 (58.87%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFGKNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGTGNFPIQTRSVVTVSVVRE*PWPLGCSFRLEFRKSF*N-----VEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQKR--WYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWV--WKDNVMNGTMDALKVPNDRDFSAGEYKDAVEGDGV 844
MT GMFM+WLK+ L PAF+A F KNKKM LVLDNASYHH +D+EV VPET++K N++LLR Y S +V R++ YNF++ G+ P R V +E + R F+K+F E +M ++ W LIWTPPYM +FQPIELFWQ GK Y+S +F+ N+ V +Q R WYGD +GQ G WKA C KLV HAI M+EW+ + N ++GT+ +L+ P EY++A D +
Sbjct: 250 MTDGMFMQWLKHRLTPAFDAQF-KNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVT--------RESEGKAAEYNFEVPAQGSLPNANRKN---GVSKE---EIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQQGKHYVSIHFERGRNILDVWKQIRLGWYGDSEWDGQEGGWKAASCGKLVQHAIGKMDEWIGLYGGN-LSGTIGSLEYP------VAEYQEATAEDEI 492
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 208 bits (529), Expect = 4.620e-58 Identity = 125/272 (45.96%), Postives = 160/272 (58.82%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFG-KNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGT--GNFPIQTR----SVVTVSVVRE*PWPLGCSFRLEFRKSF*NVEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQKR--WYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWVW-KDNVMNGTMDALKVPN--DRDFSAGEYKDAVEGDGVMLQE 856
MT MFMEWL++ L PA+ A + KKMILVLDNASYHHG+D EV VPET+TK N+ LLR + A S++V K ++ +G V +NF++ +FP R S V+ L RLE R V FM + W LIWTPPYM SFQPIELFWQHGKQY+S NF+ M +V Q R WYGD+ GQ G WKA +CSKLV HAI +MN+WV +D ++G + L+ P+ D+D D EG G +Q+
Sbjct: 402 MTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRV-------KRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEER-----VVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLSGKIGNLQKPDGYDKD-DVSPVGDVEEGVGEQIQQ 660
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 201 bits (510), Expect = 7.440e-57 Identity = 112/230 (48.70%), Postives = 139/230 (60.43%), Query Frame = 2
Query: 77 MTGGMFMEWLKNFLPPAFEAAFG-KNKKMILVLDNASYHHGYDKEVGVPETDTKTKNIQLLRTYEAGSVQVKPVEKIGKGRKARKGVVSYNFQIAGT--GNFPIQTR----SVVTVSVVRE*PWPLGCSFRLEFRKSF*NVEVFMHDRAWELIWTPPYMRSFQPIELFWQHGKQYISFNFKSSLNMAQV*EQ--KRWYGDET*EGQLGDWKATDCSKLVSHAIKDMNEWV 739
MT MFMEWL++ L PA+ A K K+MILVLDNASYHHG+D EV VPE++TK N+ LLR + A S++V + ++ +GVV YN ++ +FP R S V+ L RLE R V FM + W LIWTPPYM SFQPIELFWQHGKQY+S F+ M +V Q K WYGD+ GQ G WKA +CSKLV HAI +MN+WV
Sbjct: 251 MTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRV-------RRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEER-----VVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKWV 468 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6803.14722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6803.14722.1 >prot_H-paniculata_contig6803.14722.1 ID=prot_H-paniculata_contig6803.14722.1|Name=mRNA_H-paniculata_contig6803.14722.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp MTGGMFMEWLKNFLPPAFEAAFGKNKKMILVLDNASYHHGYDKEVGVPETback to top mRNA from alignment at H-paniculata_contig6803:2517..3539+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6803.14722.1 ID=mRNA_H-paniculata_contig6803.14722.1|Name=mRNA_H-paniculata_contig6803.14722.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1023bp|location=Sequence derived from alignment at H-paniculata_contig6803:2517..3539+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6803:2517..3539+ >mRNA_H-paniculata_contig6803.14722.1 ID=mRNA_H-paniculata_contig6803.14722.1|Name=mRNA_H-paniculata_contig6803.14722.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at H-paniculata_contig6803:2517..3539+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |