mRNA_H-paniculata_contig6660.14543.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: A0A6H5KUM1_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM1_9PHAE) HSP 1 Score: 221 bits (562), Expect = 3.080e-69 Identity = 110/184 (59.78%), Postives = 124/184 (67.39%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVP-------------------------------------TEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQYVSFNFQLKRKMHEVWEQI 441
DYHAAMTD+MFMEWLEHRL+ A+NA PEF+G++MILVLDNASYHHG D EVKVP TEPGSS R GGVSR EV ATR + L++P+ LEE V TFMR++GW LIWTPPYMPSFQP+ELFWQHGKQYVS NF+LKRKM EVW QI
Sbjct: 146 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGRQMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 329
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE) HSP 1 Score: 221 bits (562), Expect = 8.360e-69 Identity = 110/184 (59.78%), Postives = 123/184 (66.85%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVK-------------------------------------VPTEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQYVSFNFQLKRKMHEVWEQI 441
DYHAAMTD+MFMEWLEHRL A+NA PEF+GK+MILVLDNASYHHG D +VK VPTEPGSS R GGVSR EV ATR + L++P+ LEE V TFMR++GW LIWTPPYMPSFQP+ELFWQHGKQYVS NF+LKRKM EVW QI
Sbjct: 93 DYHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVKRKEGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 276
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 219 bits (558), Expect = 6.180e-67 Identity = 110/186 (59.14%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVP---------------------------------------TEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQYVSFNFQLKRKMHEVWEQI 441
DYHAAMTD+MFMEWLEHRL+ A+NA PEF+GK+MILVLDNASYHHG D EVKVP TEPGSS R GGVSR EV ATR + L++P+ LEE V TFMR++GW LIWTPPYMPSFQP+ELFWQHGKQYVS F+LKRKM EVW QI
Sbjct: 246 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQI 431
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 223 bits (568), Expect = 1.040e-66 Identity = 112/186 (60.22%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVP---------------------------------------TEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQYVSFNFQLKRKMHEVWEQI 441
DYHAAMTD+MFMEWLEHRL+ A+NA PEF GKKMILVLDNASYHHG D EVKVP +EPGSS R GGVSR EV ATR + RL+YP+ LEE V TFM+++GW LIWTPPYMPSFQP+ELFWQHGKQYVS NF+LKRKM EVW QI
Sbjct: 397 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 582
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE) HSP 1 Score: 219 bits (559), Expect = 1.630e-66 Identity = 110/186 (59.14%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVP---------------------------------------TEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQYVSFNFQLKRKMHEVWEQI 441
D+HAAMTD+MFMEWLEHRL+ A+NA PEF+GK+MILVLDNASYHHG D EVKVP TEPGSS R GGVSR EV ATR + L++P+ LEE V TFMR++GW LIWTPPYMPSFQP+ELFWQHGKQYVS NF+LKRKM EVW QI
Sbjct: 262 DHHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 447
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 221 bits (564), Expect = 2.220e-66 Identity = 111/186 (59.68%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVP---------------------------------------TEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQYVSFNFQLKRKMHEVWEQI 441
DYHAAMTD+MFMEWLEHRL+ A+NA PEF+GK+MILVLDNASYHHG D EVKVP TEPGSS R GGVSR EV ATR + L++P+ LEE V TFMR++GW LIWTPPYMPSFQP+ELFWQHGKQYVS NF+LKRKM EVW QI
Sbjct: 363 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 548
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE) HSP 1 Score: 214 bits (546), Expect = 2.810e-65 Identity = 109/186 (58.60%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVP---------------------------------------TEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQYVSFNFQLKRKMHEVWEQI 441
DYHAAMTD+MFMEWLEHRL+ A+NA PEF+GK+MILVLDNASYHHG D EVKVP TEPGSS R GGVSR EV ATR + L++P+ LEE V TFMR++G LIWTPPYMPSFQP+ELFWQHGKQYVS NF+LKRK+ EVW QI
Sbjct: 258 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGLALIWTPPYMPSFQPIELFWQHGKQYVSVNFELKRKVREVWVQI 443
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 218 bits (555), Expect = 5.520e-65 Identity = 110/186 (59.14%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVP---------------------------------------TEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQYVSFNFQLKRKMHEVWEQI 441
DYHAAMTD+MFMEWLEHRL+ A+NA PEF+GK+MILVLDNASYHHG EVKVP TEPGSS R GGVSR EV ATR + L++P+ LEE V TFMR++GW LIWTPPYMPSFQP+ELFWQHGKQYVS NF+LKRKM EVW QI
Sbjct: 373 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQI 558
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: A0A6H5KEG4_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG4_9PHAE) HSP 1 Score: 189 bits (481), Expect = 6.340e-59 Identity = 95/167 (56.89%), Postives = 107/167 (64.07%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVP---------------------------------------TEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQ 384
DYHAAMTD+MFMEWLEHRL+ A+NA PEF+GK+MILVLDNASYHHG D EVKVP TEPGSS R GGVSR EV ATR + L++P+ LEE V T MR++GW LIWTPPYMPSFQP+ELFWQHGKQ
Sbjct: 19 DYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTLMRKKGWALIWTPPYMPSFQPIELFWQHGKQ 185
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Match: A0A6H5KRM6_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRM6_9PHAE) HSP 1 Score: 191 bits (486), Expect = 4.170e-56 Identity = 97/170 (57.06%), Postives = 109/170 (64.12%), Query Frame = 1
Query: 1 DYHAAMTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVP---------------------------------------TEPGSSLSDARRAGGVSREEVTLATRAFFRLHYPDELEELVETFMRQEGWELIWTPPYMPSFQPVELFWQHGKQYVS 393
DYHAAMTD+MFMEWLEHRL+ A+NA EF+G +MILVLDNASYHHG D EVKVP TEPGSS R GGVSR EV ATR + L++P+ LEE V TFMR++GW LIWTPPYMPSFQP+ELFWQHGKQYVS
Sbjct: 305 DYHAAMTDSMFMEWLEHRLSPAYNAILEFKGNRMILVLDNASYHHGFDAEVKVPETNTKKQNVDLLRMFGAKPIRVRRKEGEQGSVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVS 474 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6660.14543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6660.14543.1 >prot_H-paniculata_contig6660.14543.1 ID=prot_H-paniculata_contig6660.14543.1|Name=mRNA_H-paniculata_contig6660.14543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp MTDTMFMEWLEHRLTSAFNANPEFRGKKMILVLDNASYHHGLDWEVKVPTback to top mRNA from alignment at H-paniculata_contig6660:2566..3123+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6660.14543.1 ID=mRNA_H-paniculata_contig6660.14543.1|Name=mRNA_H-paniculata_contig6660.14543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=558bp|location=Sequence derived from alignment at H-paniculata_contig6660:2566..3123+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6660:2566..3123+ >mRNA_H-paniculata_contig6660.14543.1 ID=mRNA_H-paniculata_contig6660.14543.1|Name=mRNA_H-paniculata_contig6660.14543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at H-paniculata_contig6660:2566..3123+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |