mRNA_H-paniculata_contig6535.14389.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6535.14389.1
Unique NamemRNA_H-paniculata_contig6535.14389.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: A0A6H5JCF0_9PHAE (RibD_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF0_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 1.120e-112
Identity = 191/334 (57.19%), Postives = 230/334 (68.86%), Query Frame = 1 
Query:  337 EQQSGEQLRRTIEDTVLRGVANGIEEHVQGVENGERPARPFVTLTYAQSIDGSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPPRETAP----SFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRLDGAIIFTNISSPEAWRWLAEWSSRSREGSEDCAANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVSTGFSVPLVDVGYVQLGEDIVVVGMPDDCN 1326
            E+ S +QLR  IED VL G+A+G+ EH + VE GE   RPFVTLTYAQSIDGSIAAADKS V LSG ESR MTHGLRSIHD ILVGAGT+RQDNPRLN+RHWPP         +            D          + ++  +PR V+ + +LS+LP +MRL GA++FT++SSP+AWRWLAEW+ RSREGSED AAN FV+VH  L A+GRCD+ DCL KLYSMG  SLMVEGGATVISSFLR   E+     EG G  DG        LVDRVVVTIAP FLQG+NVL    +     ++   +GF +PL+DVG+V+LG+D+VVVG P  C 
Sbjct:  187 ERLSQQQLRHKIEDGVLSGLASGMREHRERVERGELRPRPFVTLTYAQSIDGSIAAADKSQVFLSGSESRTMTHGLRSIHDGILVGAGTVRQDNPRLNIRHWPPASCGDGGRGTXXXXXXXXXXDFDQARGSDAIGRRGMETAAPRAVVFSGNLSQLPHSMRLGGAVVFTDLSSPDAWRWLAEWAQRSREGSEDRAANDFVIVHSPLQADGRCDVGDCLEKLYSMGFRSLMVEGGATVISSFLRGCGEQTGREEEGGGNPDGQ-------LVDRVVVTIAPTFLQGYNVLATEGNACGARTTSPGSGFPLPLLDVGFVRLGQDLVVVGAPACCQ 513
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: D8LE35_ECTSI (RibD_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE35_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 1.230e-87
Identity = 152/269 (56.51%), Postives = 184/269 (68.40%), Query Frame = 1 
Query:  550 MTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPP-------RETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRLDGAIIFTNISSPEAWRWLAEWSSRSREGSEDCAANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVSTGFSVPLVDVGYVQLGEDIVVVGMPDDCNRTR 1335
            MTHGLRSIHD ILVGAGT+RQDNPRLN+RHWPP       R T  S    +D    A   +  G+  +  +    +PR V+LA +LS+LPR+MRL GA++FT++SSP+AWRWLAEW+ RSREGSED AAN FV+VH  L A+GRCD+ DCL KLYSMG  SLMVEGGATVISSFLR   EE     E        R P G+ LVDRVVVTIAP FLQG+NVL    +     ++    GF +PL+DVG+V+LG+D+VVVG P  C   R
Sbjct:    1 MTHGLRSIHDGILVGAGTVRQDNPRLNIRHWPPASCGDGGRGTTSSEEXEEDAFDQARGSDAIGRGEKETA----APRAVVLAGNLSQLPRSMRLGGAVVFTDLSSPDAWRWLAEWAQRSREGSEDRAANDFVIVHSPLQADGRCDVGDCLEKLYSMGFRSLMVEGGATVISSFLRGCGEEMARDEEFG------RNPDGQ-LVDRVVVTIAPMFLQGYNVLATEGNACGARTTSPGAGFPLPLLDVGFVRLGQDLVVVGAPACCQGAR 258
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: A0A835YLP6_9STRA (Dihydrofolate reductase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP6_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.220e-48
Identity = 108/245 (44.08%), Postives = 137/245 (55.92%), Query Frame = 1 
Query:  451 RPFVTLTYAQSIDGSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPPRETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRLDGAIIFTNISSPEAWRWLAEWSSRSREGSEDCAANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGF 1185
            RPFVTLTYAQS+DGSIA+ADK PV +SG+ SR MTHGLRS+HD ILVG GT+R+DNPRLNVR W       S    D P                       PR ++L+S +  LP  ++  GA+IFT+    E   WLA   +R+  G  D  A+  V+VHC   A G CD+RDCLA+L +MG  S+MVEGG  +I +FL+                          LVDR+VVT+AP  L G+
Sbjct:    1 RPFVTLTYAQSLDGSIASADKRPVRISGRASRIMTHGLRSLHDGILVGGGTVRRDNPRLNVREW----VGDSGDSQDPPPC---------------------PRPIVLSSQMG-LPMAIKAHGAVIFTSFCRAETQSWLA---ARAHGGGGD--ASDCVIVHCATAAGGCCDLRDCLARLAAMGFASVMVEGGGRIIRAFLQA------------------------GLVDRLVVTVAPLMLGGY 190
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: A0A5J6P8K7_9GAMM (GTP cyclohydrolase n=1 Tax=Cellvibrio sp. KY-GH-1 TaxID=2303332 RepID=A0A5J6P8K7_9GAMM)

HSP 1 Score: 129 bits (324), Expect = 5.140e-30
Identity = 96/308 (31.17%), Postives = 142/308 (46.10%), Query Frame = 1 
Query:  400 NGIEEHVQGVENGERPA-RPFVTLTYAQSIDGSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPPRETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRLDGAIIFTNISSPEAWRWLAE---WSSRSREGSEDCAANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVSTGFSVPLVD-VGYVQLGEDIVVVG 1308
            N IE+ +   +    PA RPFVTL+YAQS+DGSIA     P+ALSG ES  +TH LRS+HD ILVG GT+  D+P+LNVRHW                                    LSP+ ++L S L  +P + RL         +    W    +   WS +  EG+E C+            A+GR  +++ LA LY  G+  LMVEGGA VI++F++                          LVD VV+T+ P F+ G+  +            ++ +   +P++      +LG+D+++ G
Sbjct:    5 NTIEDWLTRTQRNRAPANRPFVTLSYAQSLDGSIALRSCEPLALSGSESLRLTHQLRSLHDGILVGIGTVLADDPQLNVRHW----------------------------------SGLSPQPIVLDSQL-RMPSDARL------RQCAEKPCWILTTQSNQWSEQ--EGAEICSLQPG--------ADGRVCLQNALALLYEKGIRQLMVEGGANVITAFIKA------------------------QLVDVVVITLVPKFVGGYKAV---------GDLEIGSRVELPVIQPFNTERLGDDVIMWG 228
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: A0A2P6BX91_9BACT (GTP cyclohydrolase-2 n=1 Tax=Salinibacter sp. 10B TaxID=1923971 RepID=A0A2P6BX91_9BACT)

HSP 1 Score: 132 bits (332), Expect = 3.620e-29
Identity = 106/304 (34.87%), Postives = 142/304 (46.71%), Query Frame = 1 
Query:  421 QGVENGERPARPFVTLTYAQSIDGSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPPRETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRL---DGA--IIFTNISSPEAWRWLAEWSSRSREGSEDCAANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVSTGFSVPLVD-VGYVQLGEDIVVVGMP 1314
            +  E+ +   RPFVTLTYAQS+DGSIA  D SP+A+SG ES + TH LR+ HDAILVG GT+  D+PRLNVRH                         +GK           P  V+L S L   P + RL   +G   II TN  +P+  +   E             A    VV       G C +   +  L   G+ S+MVEGG  VISSF+R+                         +VD +++T+AP F+ G   L+   S+ DDA +      S P +D V Y  LG+D+V+ GMP
Sbjct:  221 RATEHFQTTGRPFVTLTYAQSLDGSIATDDGSPLAISGSESMSFTHQLRATHDAILVGIGTVLSDDPRLNVRH------------------------SSGKH----------PTPVVLDSQL-RFPTDARLLSREGPKPIIATNDKAPDDRKHALE-------------AEGATVVRLSCDPRGIC-LDPLMEDLAERGVESVMVEGGTEVISSFMRQ------------------------QMVDHLILTVAPMFVGGQRALSTLASDTDDAEAS-----SFPELDHVRYRWLGKDLVLEGMP 446
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: T0RID1_SAPDV (Riboflavin biosynthesis protein RibD domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RID1_SAPDV)

HSP 1 Score: 125 bits (313), Expect = 1.760e-28
Identity = 99/306 (32.35%), Postives = 144/306 (47.06%), Query Frame = 1 
Query:  406 IEEHVQGVENGERPARPFVTLTYAQSIDGSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPPRETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRLDGAIIFTNISSPEAWR-WL----AEWSSRSREGSEDCAANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVSTGFSVPLVDVGYVQLGEDIVVVG 1308
            ++ H +GV + +   R  VT+TYAQS+DGSIAA    P  LSG ES AMTH LR++HD ILVG GTI+ DNP L VR  PP      F                            +P+ +I+ + L ELP + +L        ++SP   R W+      W            A+   ++ C+       D  D   KL ++GL S+M+EGGA++++S LR                D    P G  ++   ++T+AP F+ G + LT+ R  AD A   +S   ++PL        G+DIV+VG
Sbjct:    5 VDFHTRGVIDAQSTGRLHVTMTYAQSLDGSIAAIRGQPTLLSGPESMAMTHQLRTLHDGILVGVGTIQADNPSLTVRLVPP-----PFE---------------------------NPQPIIVDTRL-ELPLDCKL--------LTSPLCKRPWVLTTDGHWDQGKLARKSTLEAHGARIIPCKCAGTTHIDWSDAFDKLRALGLLSVMIEGGASILTSVLR----------------DHAHTPSG--ILHHAIITVAPTFIGGLHALTE-RLPAD-AYPTLSNTQAIPL--------GKDIVLVG 241
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: A0A2T6FMN6_9GAMM (GTP cyclohydrolase n=2 Tax=Cellvibrio TaxID=10 RepID=A0A2T6FMN6_9GAMM)

HSP 1 Score: 123 bits (309), Expect = 5.040e-28
Identity = 96/309 (31.07%), Postives = 141/309 (45.63%), Query Frame = 1 
Query:  406 IEEHVQGVENGERPA-RPFVTLTYAQSIDGSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPPRETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRLDGAIIFTNISSPEAWRWLA---EWSSRSREGSEDCAANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVSTGFSVPLVDVGYVQ-LGEDIVVVGMPD 1317
            IE  + G +    PA RPFVTL+YAQS+DGSIA     P+ALSG ES  +TH LRS+HD ILVG GT+  D+P+LNVRHW                         GK          +P+ ++L S L  +P + RL         S    W       EW ++   G E C +           ++GR  +++ LA LY  G+  LMVEGGA VI++FL+                          LVD VV+T+ P  + G+  +            ++ +   +P ++  + + LG+D+++ G  D
Sbjct:    7 IEHWLTGAQKSLSPANRPFVTLSYAQSLDGSIALRSSEPMALSGNESLRLTHQLRSMHDGILVGIGTVLSDDPQLNVRHW------------------------TGK----------NPQPIVLDSQL-RMPSDARL------RQCSEKPCWILTTQEREWPNQG--GIEICQSQPG--------SDGRVCLKNALALLYEKGIRHLMVEGGAHVITAFLKA------------------------QLVDAVVITVVPRIVGGYKAV---------GDLEIDSRVDLPAINPFHSERLGDDLILWGTLD 231
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: UPI0004644D2B (RibD family protein n=1 Tax=Marinimicrobium sp. LS-A18 TaxID=1381596 RepID=UPI0004644D2B)

HSP 1 Score: 123 bits (309), Expect = 9.660e-28
Identity = 99/308 (32.14%), Postives = 137/308 (44.48%), Query Frame = 1 
Query:  409 EEHVQGVENGERPARPFVTLTYAQSIDGSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPPRETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRL-----DGAIIFTNISSPEAWRWLAEWSSRSREGSEDCAANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVSTGFSVPLVDVGYVQLGEDIVVVGMPD 1317
            + H     N  +  RP VTLTYAQS DGSIA+   +P+ALSG ES  MTH LRS+HD ILVG GT+  D+PRLNVR W  R+                                  P+ ++L S L  +P + RL      G  + T ++S +                 DC     VV       EG  ++ + L  LY  G+ +LMVEGGA+VI++FLRE                         L D VV+T+AP F+ G+N +         +S +   G    +V +   QL +++VV G  D
Sbjct:   15 QRHFHQASNNAKARRPHVTLTYAQSWDGSIASDPGTPMALSGDESLRMTHQLRSLHDGILVGIGTVLADDPRLNVRKWSGRD----------------------------------PQPIVLDSHL-RMPPSSRLCQRGDHGCWVLTTVASAD--------------NRHDC--EPIVVPG---DEEGHVNLHEALQLLYQRGINTLMVEGGASVITAFLRE------------------------GLADAVVLTVAPVFIGGYNAI--------GSSKEGDRGLP-RIVALHSHQLDDELVVWGRLD 235
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: A0A3D0H6W1_9DELT (GTP cyclohydrolase n=2 Tax=Syntrophobacteraceae bacterium TaxID=2052185 RepID=A0A3D0H6W1_9DELT)

HSP 1 Score: 122 bits (307), Expect = 1.170e-27
Identity = 90/295 (30.51%), Postives = 134/295 (45.42%), Query Frame = 1 
Query:  433 NGERPARPFVTLTYAQSIDGSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPPRETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRLDGAIIFTNISSPEAWRWLAEWSSRSREGSEDCAANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVSTGFSVPLVDVGYVQLGEDIVVVGMPD 1317
            N  +  RPFV ++YAQSIDGSIA  D+ P+ +SG+ +  +TH LRS+ DAILVG  T+  D+P+L VR                                   VQ  +P+ V+L + L  +P   RL        +   +   WLA     S   +         ++ C+L + G+ DI   +  L+S G+ SLMVEGGA VI+SF+                           LVD  ++TI+P  + G  V+ + R+E+  A  +        LVD+ Y QLG D+++   PD
Sbjct:   24 NRRQMRRPFVVISYAQSIDGSIATKDRRPLQISGQAAMVLTHTLRSLFDAILVGIDTVLADDPQLTVR----------------------------------LVQGKNPQPVVLDTHL-RIPIESRL--------LQRSDCGSWLASSKFTSEARASGFTRTGATILRCQLNSHGQIDICQLMDILHSRGICSLMVEGGAKVITSFINA------------------------GLVDLFIITISPTLIDGLRVV-QGRNESPLAKLN--------LVDIYYEQLGNDLILWARPD 242
[Close]
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Match: A0A4Q5Q3B5_9GAMM (RibD family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A4Q5Q3B5_9GAMM)

HSP 1 Score: 120 bits (302), Expect = 5.290e-27
Identity = 91/289 (31.49%), Postives = 128/289 (44.29%), Query Frame = 1 
Query:  451 RPFVTLTYAQSIDGSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRHWPPRETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLSELPRNMRLDGAIIFTNISSPEAWRWLAEW--SSRSREGSEDCA-ANSFVVVHCRLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGEGNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVSTGFSVPLVDVGYVQLGEDIVVVG 1308
            RPFVTL+YAQS+DGSIA     P+ALSG++S  +TH LRS+HD ILVG GT+  DNP+L VRHW                                  + ++P+ ++L S L  +P   RL          SP+   W+        +RE   D   +    +      A+GR  +   L  L   G+TSLMVEGGA VI++FL+                          L D +V+T+ P  + G+  +      +  A   +S  FS PL        G+D+VV G
Sbjct:   23 RPFVTLSYAQSLDGSIALRCDEPLALSGRQSLQLTHQLRSLHDGILVGIGTVISDNPQLTVRHW----------------------------------EGVNPQPIVLDSKL-RMPITARLR--------HSPDKTCWVLTTCEGENARESESDLDHSQGLEITALEGNADGRVCLEGALKLLRQKGITSLMVEGGAAVITAFLKA------------------------QLADAIVITLVPKLVGGYKAVNDLGVSSKAALPAISPLFSSPL--------GDDLVVWG 236
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6535.14389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCF0_9PHAE1.120e-11257.19RibD_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LE35_ECTSI1.230e-8756.51RibD_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YLP6_9STRA1.220e-4844.08Dihydrofolate reductase-like domain-containing pro... [more]
A0A5J6P8K7_9GAMM5.140e-3031.17GTP cyclohydrolase n=1 Tax=Cellvibrio sp. KY-GH-1 ... [more]
A0A2P6BX91_9BACT3.620e-2934.87GTP cyclohydrolase-2 n=1 Tax=Salinibacter sp. 10B ... [more]
T0RID1_SAPDV1.760e-2832.35Riboflavin biosynthesis protein RibD domain-contai... [more]
A0A2T6FMN6_9GAMM5.040e-2831.07GTP cyclohydrolase n=2 Tax=Cellvibrio TaxID=10 Rep... [more]
UPI0004644D2B9.660e-2832.14RibD family protein n=1 Tax=Marinimicrobium sp. LS... [more]
A0A3D0H6W1_9DELT1.170e-2730.51GTP cyclohydrolase n=2 Tax=Syntrophobacteraceae ba... [more]
A0A4Q5Q3B5_9GAMM5.290e-2731.49RibD family protein n=1 Tax=Gammaproteobacteria ba... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6535contigH-paniculata_contig6535:1427..8750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score122.5
Seed ortholog evalue4.9e-25
Seed eggNOG ortholog112098.XP_008616895.1
Preferred nameRIB7
KEGG rclassRC00933
KEGG koko:K14654
KEGG ReactionR09375,R09376
KEGG Pathwayko00740,ko01100,map00740,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001522,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008703,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0016853,GO:0016866,GO:0017144,GO:0018130,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.5-amino-6-(5-phosphoribosylamino)uracil reductase activity
EggNOG OGs2RZWZ@2759,COG1985@1
Ec32 ortholog descriptionDihydrofolate reductase-like domain
Ec32 orthologEc-05_004210.1
EC1.1.1.302
COG Functional cat.H
BiGG ReactioniMM904.YBR153W,iND750.YBR153W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size2578
Cds size1299
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6535.14389.1prot_H-paniculata_contig6535.14389.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6535 2667..8711 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930766.4317982-UTR-H-paniculata_contig6535:1426..26661622930766.4317982-UTR-H-paniculata_contig6535:1426..2666Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6535 1427..2666 -
1691481442.7823143-UTR-H-paniculata_contig6535:1426..26661691481442.7823143-UTR-H-paniculata_contig6535:1426..2666Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6535 1427..2666 -
1622930766.5993032-UTR-H-paniculata_contig6535:8711..87501622930766.5993032-UTR-H-paniculata_contig6535:8711..8750Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6535 8712..8750 -
1691481442.8600116-UTR-H-paniculata_contig6535:8711..87501691481442.8600116-UTR-H-paniculata_contig6535:8711..8750Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6535 8712..8750 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930766.447204-CDS-H-paniculata_contig6535:2666..27611622930766.447204-CDS-H-paniculata_contig6535:2666..2761Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 2667..2761 -
1691481442.8004444-CDS-H-paniculata_contig6535:2666..27611691481442.8004444-CDS-H-paniculata_contig6535:2666..2761Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 2667..2761 -
1622930766.4665475-CDS-H-paniculata_contig6535:3441..36611622930766.4665475-CDS-H-paniculata_contig6535:3441..3661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 3442..3661 -
1691481442.8122525-CDS-H-paniculata_contig6535:3441..36611691481442.8122525-CDS-H-paniculata_contig6535:3441..3661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 3442..3661 -
1622930766.4867027-CDS-H-paniculata_contig6535:4723..48861622930766.4867027-CDS-H-paniculata_contig6535:4723..4886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 4724..4886 -
1691481442.8207202-CDS-H-paniculata_contig6535:4723..48861691481442.8207202-CDS-H-paniculata_contig6535:4723..4886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 4724..4886 -
1622930766.507093-CDS-H-paniculata_contig6535:5113..53501622930766.507093-CDS-H-paniculata_contig6535:5113..5350Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 5114..5350 -
1691481442.8290977-CDS-H-paniculata_contig6535:5113..53501691481442.8290977-CDS-H-paniculata_contig6535:5113..5350Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 5114..5350 -
1622930766.548416-CDS-H-paniculata_contig6535:5625..57291622930766.548416-CDS-H-paniculata_contig6535:5625..5729Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 5626..5729 -
1691481442.837916-CDS-H-paniculata_contig6535:5625..57291691481442.837916-CDS-H-paniculata_contig6535:5625..5729Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 5626..5729 -
1622930766.5771763-CDS-H-paniculata_contig6535:8231..87111622930766.5771763-CDS-H-paniculata_contig6535:8231..8711Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 8232..8711 -
1691481442.847971-CDS-H-paniculata_contig6535:8231..87111691481442.847971-CDS-H-paniculata_contig6535:8231..8711Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6535 8232..8711 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6535.14389.1

>prot_H-paniculata_contig6535.14389.1 ID=prot_H-paniculata_contig6535.14389.1|Name=mRNA_H-paniculata_contig6535.14389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=433bp
MPRTHDTTRVHLDAAIVQQAHKSSSSPHSRSGVTTYLPSFPSLRRICWVS
VFLAYTTRQAQQRSMPPTAAAALELRLSRTTSRANNIALVTSSTGEKHRE
QQSGEQLRRTIEDTVLRGVANGIEEHVQGVENGERPARPFVTLTYAQSID
GSIAAADKSPVALSGKESRAMTHGLRSIHDAILVGAGTIRQDNPRLNVRH
WPPRETAPSFSHADDPESTAHDHEIAGKQARNKSVQDLSPRVVILASSLS
ELPRNMRLDGAIIFTNISSPEAWRWLAEWSSRSREGSEDCAANSFVVVHC
RLTAEGRCDIRDCLAKLYSMGLTSLMVEGGATVISSFLRELNEEAVEGGE
GNGYRDGYRGPCGKNLVDRVVVTIAPAFLQGFNVLTKPRSEADDASSDVS
TGFSVPLVDVGYVQLGEDIVVVGMPDDCNRTR*
back to top

mRNA from alignment at H-paniculata_contig6535:1427..8750-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6535.14389.1 ID=mRNA_H-paniculata_contig6535.14389.1|Name=mRNA_H-paniculata_contig6535.14389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7324bp|location=Sequence derived from alignment at H-paniculata_contig6535:1427..8750- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGGTGCTGACGTACAGGAGTTGAAGGTGTGATTCAGCAATGCCTAGGAC
ACATGACACCACGAGGGTTCATCTCGACGCAGCAATAGTGCAGCAAGCTC
ATAAATCATCCAGCTCTCCACACTCACGCAGTGGAGTAACGACGTATTTG
CCCAGTTTTCCCTCACTTCGGCGCATATGCTGGGTGTCCGTTTTCCTAGC
ATACACAACCAGACAGGCTCAGCAGCGTAGCATGCCCCCAACAGCAGCGG
CGGCATTGGAATTGCGCCTATCGCGCACAACATCCCGAGCCAATAATATT
GCCTTGGTCACATCCTCGACTGGGGAGAAGCATCGAGAACAACAGTCTGG
CGAACAACTACGTCGAACAATCGAAGACACCGTGCTCAGAGGGGTGGCAA
ACGGCATTGAAGAACATGTTCAAGGGGTCGAAAATGGAGAGCGGCCAGCC
CGGCCATTCGTGACTCTAACGTATGCACAGAGCATTGACGGGAGCATCGC
AGCCGCAGACAAATCACCGGTGAGGAAGGAGAATCTAATGCAGAATACAA
TCGGTGTGTAGATTGTACGCAAGCAGTTTGCGTTCTCTCAAAATTTCAAT
TTAACCAGGACATATTACGGAACCACGGAACGCTCACGGAACGGGATCCC
CGTCCCCTCGATTTTTCAAGAAGGGGACCAGGTCCAGTCCGGTGAAAATA
TGAGTTGCCCTTGTGTTGCCCGTCCTCTCCCGTTAGTATGAGACTAGATC
TGATCCGGTCCGATCGTTTTCAAGAACATTGCGACGGAATCCCGTCGGAT
GCTATCCCGTAATATCATGGGACGGGACACGACCAGTACATTTGTCAACA
ATAATCCCAGTCCCGTCCCGTCAAAATATGAATCCCCCTTGTCCCATCTT
CCCCCTCAGAGTCCCTTATAAAGGGCTGTTCTAACCAAGTGAGCCTGATA
TTCCGTTTTCCGATTTTTGTTTGATATTTTGCATGCCGCCACCATCGCAT
TCGGAAGTTATCTTGTTATTTGCGATTGAAAGGGCTGCAGCATAGACACT
CGCGAACAGAAATCGGAAAAAGGAAAGTGGAAGAACAGGCTCGCTCGTTC
AGAACGGTCCTTACACATGAGGAAAAAAACAGATAGAAAAAAACAACTCT
GTTCTAGGAATCGCAACACCTAACTACTGATTGCGTTAGATAGCAGTCAT
GTTGTCATGATCCGAGTGCATCTCTGTGGCAGGCGACCTGCTGTTGAGCC
GGTGGGTTCCGTCTGTTACAACAAGACACACGTGGCGGCTATCGCTCGCA
ACAGAACTCTCAAGTTATACTGGTAACTACCCGCTCTTTTCCTCTCTTCT
CTTCGTGTGTCGCAGATATAGTGCTGCATACAGTAGTACACCAACTGTAC
TGCATGCAGTACAGTCTGTTTCTTGTCGCCGTGCGCAACTCTACAATGCC
ATAATCTTTGCGCTTTCCGGCTGGCTGCCGCCGCTCAGTGGAACCAATTT
ATGTATTGCAGTTTATTAGCTGTACCACCTCTACATAAAGCACGAGGCGT
TGCGGCTGCTGCAGCCAGCCCTTGAGACGCGTGGAATACTGTAAAAAAAG
TGGACGCCCACCAAGCCTCGTTCTGATATATCAAGTTTATGTGTATTAAT
TACTGAAGCATGTCATAGTCTCGCTTTACTATTTTTCGTATGTTGTCGAC
ATACGAGTCTGATCTTACCCCGGCCGAAGCAATCGTGCCCATCGAAATTC
GGTACCCCCTCTCTCCCTACCGAAAAGTACCCCCCCCCCCCCCCCCCTTG
ACACGGGATTGTCAGATATCATAAGTTGAAATTTGTCGAAGTGCAGGAAC
TCGGGTGTGAGGGGGTTAAGCCCTGAATTGAACCGCTTTGACCATAGGCC
GTTTCGGAACGAATAATGCATGTGATAACGAATATCTAGCGCTGCTGTCA
CTCTGTATGTAAAGTCTTGCTGTACTGTTCATCTGGAAAGTGGCAGCTCC
CTATCCCCGCAATCATGTAATGGGCGTCATTTCTATTGTTTTTGATGTAG
GGGTCAGATATTGATCGACTGGGAGCTGGCGCGAAAGGGCTCAAAATCCT
TATCAATTAATCAATACGGTAATGATGATGCGGTTCCTCTTGGAACATTT
TCTCGTCTCTATCCAAGTGTTTGTTCAAAGTATCATGTGACGTGGGCTAG
TTTGAAGGGATCTCGAGTCAGATCACCAAATGGCTTGCCTATGAGTGTAA
AAGTTAAGTCGTCGTTCAGCTCTATTGAACTGTATTGTATCACAGTCATG
TCTCATGTTCGAACTTGAGAACGTTTCAACGGCAAAAACAGCAAAAAATG
ACTGCGTACGGGAGAAAAACAATCCCAAGAAAATAACCCCTTCAATTTGA
ACGTCGACGAGCGAGTAGACCCGCGCGTGCCGACCGACTGACGGACTATT
GCCTTGAAAAAAACTAGGGGGTCCTTGTGGCAGGCAGTCATAGCGGTTAG
ATGCACCGACATACCCACCATCGGGCATGTTCGCGCTTTAGCGAAATACA
TCGGATGTTGAAAGCGTGACCGTGCACTTCAGTTCGGTGCATATGCCATG
TATGTCATGTAGATTCACAACATAAAAACCTGCCCGTGCTCTCTATTGAA
CCGTAATATTCCCATACTGTGCAATTGTTGAAAGGGAACGCAAGGATGAA
GTGCCATGTCCTATCTGGTGGTCATGCGATCGACGCAATTAAGACGATCG
TCAGTGTAGTCAGGGTGCTGGGACAACTCTTCAATGGAGTGCATCTTGGC
TGCAAAACCAATGGTGTCTCCACTGTTCCGACTTCCTAGTGTACAACCCT
GTACGTACCGTAAAGGCAACATTGTTTTACACCCCATGCGTCAAGCTGTC
CAAGCGGCAAGGCGGTGATCATCCTATTCCACTCGAGAATACAGACGGCA
CATGCCATTTATTGCGTTTCCTGACTAGTGTGATACGTCTCGTTTGTATT
GGCTGCTGCATCCTTGGGTAGGTGGCTTTGAGCGGGAAAGAGAGCCGCGC
CATGACTCATGGTCTACGTTCCATCCATGACGCTATTCTGGTTGGAGCGG
GAACAATTCGACAAGACAATCCCCGGTAGGTACAACACAACACAATGCAT
TGGTTAAACCAACCCCAACTCCATGACTGTAACCACGTGCATAAACGTAC
GTGTATCAGATCCGACTTACCTGCGAACCGAGCTGGGGAAATGCAAAGAC
AAGCACTCCTTACAACATCAAGCTGCACTTGTGCCTGATCCCAGTAACCA
TTGTTCTATACTCGAAGTACACATTTCGTTGAACCCATCAGTTCCCCCCT
CTGACGCCCCCCCCCCCCGTGTTCGATATCTCTCCCCGTGAAATATTAAG
GCTTAATGTTCGCCATTGGCCACCGCGAGAAACAGCGCCCTCCTTTTCCC
ACGCCGACGATCCTGAGAGTACTGCCCATGATCACGAGATCGCCGGCAAA
CAAGCAAGAAACAAATCAGTCCAAGACCTGTCACCGCGGGTAGTGATACT
GGCCTCTAGTCTGAGTGAATTACCTCGAAACATGCGACTAGATGGTGCGA
TAATCTTTACGAATATCTCTTCTCCGGAGGCGTGGAGGTGGGCGATCTAC
TCGACTCTGTAGCGCTTGACACTATTCTATTGCGACAGGGCGTGGGGGCA
AGGGAGTCATGTGTTGGACGGGATGTGTACTACTACTAGTAGCGTCCATT
GTGAATTGTTGAAAAAGCGATCTCGTCGTTTGCCTTCTACTATCTGTATC
AAAACTTCTCGTATTCGAAAAATCATGTTGTCTAGTTATAGCTGCTGCCG
CTGATGAAGAATAGGTGGCTGGCGGAGTGGTCATCGAGAAGTCGCGAGGG
ATCGGAGGATTGTGCAGCGAATAGCTTTGTCGTCGTGCACTGTCGATTAA
CAGCTGAGGGACGATGCGATATCCGAGATTGCTTGGCCAAGCTATATTCC
ATGGGCTTGACCAGTCTCATGGTCGAGGTGCGAGTTGCCGTCGCGCGGCG
GCATACTGTCTTTGCCCCGTCCAATAGTCGCTAAATTATCGCGTAGGTTG
TGGAAGTGACCACGACAAAATACGCTTACCCGCCGACGAGATCCATGGTA
GCCTACATAGCGGTAGAATATTCCACCCCCCGGACAAATACGAATACTTG
TAGACGGTTTTCACGAAAATTAAAAGTATTTGCCTGAGTTTCAGAATGAT
CGGACACACGGAATAAAGTACGCACCCCTGTCTATAAAATCATTTGCAAG
CATTCGTATTTGTCTGGAGGGTGGAATCTCCCATGGGAAGCGAGCAGGCA
CTTGTGCAGTCGAGCCCTAGCGATGGTATATCGCTGAGGGCAGGCTTACC
ACAGACTACTCCCCTAATTTCGGCATTGATGCTCACTCGCATAGGGAAAA
TGGTCCGTTCTGCTTTCATGAACCAAATATAGTTCGTGTGGCCTTTGGTA
CAGTATGCTGCACCTTTCTAGTTTGCGCTTCTTCGATAGAGATTTTACGT
GTGCTGTGTCTGCTGAATCGCTTGCAGACCACATCGAATTTTTGACTTGC
ATAATCTCGAACAGACCTAGGGCTTATCGTATGTCTCTGCGGACTCTGCA
CTACCGTACTAGGTGTTGTGATTTACTGCCACTACCACCCTGTGCTCCCG
GTACTGCCACCCGCTGATCTTTTTTTTCATTTTTTTTATCAAGTAGTGTT
GCACACATCACGTGCTGTGAGTAGTTATGATGGAATTCTGTTCGCTGGGG
AGTGTACAAAATTGTGCGCAAAACGACGGCAGGGCTCTCTTGACATTTGT
TAAAATAATCAGCTTTTAGTTTATTCGAAATAACCTTCGCCACGCAAAGG
GCTGATAAAACGACGAAGTCGGCAGATGCAAGCAGTGGTCTCGAAAATAC
TTGGGAAAAGTGAGACAAACCAAAATGCTTCCAGTTCAACCGCGACTCTC
AATAGTTCGGACGTTGGCGAATGGCATTCCCTCTCTCGTAGAGAACGCTA
CGATTCCCTTATTGTAATAAACATGTATCGTTGACCCAGGGGGGAGCGAC
CGTGATCTCGTCTTTTTTGCGCGAATTGAACGAGGAGGCGGTGGAGGGGG
GAGAAGGGAACGGTTATAGGGACGGATATCGTGGCCCGTGCGGCAAGAAT
CTGGTTGACCGCGTGGTCGTGACCATTGCTCCCGCTTTCCTTCAAGGATT
CAATGTCTTAACCAAGCCGAGATCTGAAGCAGATGATGCTAGCTCGGACG
TCTCGACAGGTAATGTGGTGTACTGCGATAAGATAATGTGACAAGGACGT
GACGTAATATGATGTGACGTGGTCTGATGTTATGTGTAAGGGGGACATTC
TACTTAAACTGTGTTTGTGGTCCTACAGTTCGTTTCGCCTGGTCTTACTT
CCTCGAGTCTGCAGCGATGAGATATCCCTCGAAATCACTATTTCTGAATT
CCAAACAAGACCCAAACGGCGCCGCTAGTGCAGTAGGAGGGCTGGGGCGC
AATAGCTAACCTTGAATTATGCAGAAATAGAGGACATACATTTGCAGGTG
ACCATGTATTCATTCGCTTGACCTGGTTGTGCTTATTTTGCCTATACCGG
AGGTAAGTAACACGAATAACACAGCTACTAATCGACATCCTTCTATAGGC
CCCATTTTTTTGCGAAAGTCGTTTTTTTCAGCAGATAAAAATTCTCATTT
TACCTCATGATATCGTTGACATATTGTATGTATTCTGGTGGAAAAGGGGG
AGTTGAGACCTTTGGGGATTAGTAAGCAGGACGTTCTGCATGTGTTTATT
GTAACAACGGAACGGAGTGACAGCTGTTAGAAAATATACCATATGTGTGG
AAAAACACGTTCAATAACCATCTGTTTGGCGACGAACGTTTCTCTACGCT
CTTGTTGTTCGTATTTTCAATTACTCACTTGCGGCGCAGGCTTTTCTGTG
CCCCTGGTGGACGTAGGCTATGTTCAGCTAGGGGAAGATATCGTCGTAGT
CGGAATGCCTGATGACTGCAACCGTACCCGGTGAGCAGTAGTTGCACGTC
TATTGTACACCTACATTCGCCTCCTTCTTGGCCGTAGTTGGATTGTCACT
AATAGGTACATGCAAAGGGGGTGGTGCTGAGGCTGTGTATGACGTGTGAT
TGTAACGACAAGGTAGAATCGTCAGCCGAAAGTAAGGACACCCCCCCTTT
CGTGAATATTTAGAAGACGTTCGCGTGTGTAGATGCCCCTTGTTCCTTGC
CTTACAGTTAATTTGACTTCTTGACATCTTTTCTTCGATAAACATTTTTT
CTGTCGGTGTGGTTGGATCAGCGGAAGCTTTCCTCCTCAAAGACATGGGA
ATATATAGCTTTCATAAGTTCGTGTTGTAGACGTTGGTTACAAAGGCATG
GGGGTGGAGCACAGGTGCCCTGTGAGTAGAGAGATCGATATATTTACCTT
GTTGTCGAAGGTTTCCGTTGTGATTTTGTAACTTGACACTTCCTGGTTCC
CCTCTACATATCACCACTTTTAGTTTGCTCGGATATTCGCAAATAAACGA
AAGTCCGATTAATTACATTACAGTTAAAAAATGGTTTCAAAATTCGTCTA
TAATGGATGTACATGGCCGATAGATGAGTAAGGTACATGGCAGGGCGCAT
CGTCGAAGGTGAAAGGGCAGTTTCCAGTGCTGCTGCCGTTGCTGCAGGTT
GAATAGAGAGGCTCTTATTTCGTAAGAGCATTTTTTTCCAGTTCTAGGCT
GTCTTTCATTGCAGGTGGTTCAGGTGCTGCTCTATCGTTGGATATTTCTG
GCCGATGCATGTGTAGGCGTGAGAGGTCAACCCCGTACATTCTCTTTTGC
CGGACATCTGATATCGGTGATATTCGAGGATTTCTGCTCGTTCATAGCTC
GCTCTAGATTCTTGATTTCGGGTGTTCGATCTTCTTCCTGATTTTTTGTA
CGCGGTGTGACTGAAGTAAAGTGGATGAGGTAACAATGATGGAATAACTT
GTAGGCTCCCGATTCCAAGGTTGAACCTGGGTCTTTTCGAAAGCTCCCAA
CAGCTCTCCAATGCTGCTTCTATTTTTTTTGGCGCGTTTTTGGTTCTTTC
GTACTATAGGACTTTTTCAAGTTTTGCGGTGAAAAACAAAACACAAGTTC
ACGTGCTTGCCTTGTTGCGACGATATGCAAAAAATAAATACGGTTCTTGA
AAGTTTTGATTTCAGGTTACCAACGACACGTCGTTCGGTCGCGAATTGTC
AGGACTTGAGGGTTCATCATCCGC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig6535:1427..8750-

>mRNA_H-paniculata_contig6535.14389.1 ID=mRNA_H-paniculata_contig6535.14389.1|Name=mRNA_H-paniculata_contig6535.14389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2598bp|location=Sequence derived from alignment at H-paniculata_contig6535:1427..8750- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTAGGACACATGACACCACGAGGGTTCATCTCGACGCAGCAATAGT
GCAGCAAGCTCATAAATCATCCAGCTCTCCACACTCACGCAGTGGAGTAA
CGACGTATTTGCCCAGTTTTCCCTCACTTCGGCGCATATGCTGGGTGTCC
GTTTTCCTAGCATACACAACCAGACAGGCTCAGCAGCGTAGCATGCCCCC
AACAGCAGCGGCGGCATTGGAATTGCGCCTATCGCGCACAACATCCCGAG
CCAATAATATTGCCTTGGTCACATCCTCGACTGGGGAGAAGCATCGAGAA
CAACAGTCTGGCGAACAACTACGTCGAACAATCGAAGACACCGTGCTCAG
AGGGGTGGCAAACGGCATTGAAGAACATGTTCAAGGGGTCGAAAATGGAG
AGCGGCCAGCCCGGCCATTCGTGACTCTAACGTATGCACAGAGCATTGAC
GGGAGCATCGCAGCCGCAGACAAATCACCGATGCCTAGGACACATGACAC
CACGAGGGTTCATCTCGACGCAGCAATAGTGCAGCAAGCTCATAAATCAT
CCAGCTCTCCACACTCACGCAGTGGAGTAACGACGTATTTGCCCAGTTTT
CCCTCACTTCGGCGCATATGCTGGGTGTCCGTTTTCCTAGCATACACAAC
CAGACAGGCTCAGCAGCGTAGCATGCCCCCAACAGCAGCGGCGGCATTGG
AATTGCGCCTATCGCGCACAACATCCCGAGCCAATAATATTGCCTTGGTC
ACATCCTCGACTGGGGAGAAGCATCGAGAACAACAGTCTGGCGAACAACT
ACGTCGAACAATCGAAGACACCGTGCTCAGAGGGGTGGCAAACGGCATTG
AAGAACATGTTCAAGGGGTCGAAAATGGAGAGCGGCCAGCCCGGCCATTC
GTGACTCTAACGTATGCACAGAGCATTGACGGGAGCATCGCAGCCGCAGA
CAAATCACCGGTGGCTTTGAGCGGGAAAGAGAGCCGCGCCATGACTCATG
GTCTACGTTCCATCCATGACGCTATTCTGGTTGGAGCGGGAACAATTCGA
CAAGACAATCCCCGGTGGCTTTGAGCGGGAAAGAGAGCCGCGCCATGACT
CATGGTCTACGTTCCATCCATGACGCTATTCTGGTTGGAGCGGGAACAAT
TCGACAAGACAATCCCCGGCTTAATGTTCGCCATTGGCCACCGCGAGAAA
CAGCGCCCTCCTTTTCCCACGCCGACGATCCTGAGAGTACTGCCCATGAT
CACGAGATCGCCGGCAAACAAGCAAGAAACAAATCAGTCCAAGACCTGTC
ACCGCGGGTAGTGATACTGGCCTCTAGTCTGAGTGAATTACCTCGAAACA
TGCGACTAGATGGTGCGATAATCTTTACGAATATCTCTTCTCCGGAGGCG
TGGAGGCTTAATGTTCGCCATTGGCCACCGCGAGAAACAGCGCCCTCCTT
TTCCCACGCCGACGATCCTGAGAGTACTGCCCATGATCACGAGATCGCCG
GCAAACAAGCAAGAAACAAATCAGTCCAAGACCTGTCACCGCGGGTAGTG
ATACTGGCCTCTAGTCTGAGTGAATTACCTCGAAACATGCGACTAGATGG
TGCGATAATCTTTACGAATATCTCTTCTCCGGAGGCGTGGAGGTGGCTGG
CGGAGTGGTCATCGAGAAGTCGCGAGGGATCGGAGGATTGTGCAGCGAAT
AGCTTTGTCGTCGTGCACTGTCGATTAACAGCTGAGGGACGATGCGATAT
CCGAGATTGCTTGGCCAAGCTATATTCCATGGGCTTGACCAGTCTCATGG
TCGAGGTGGCTGGCGGAGTGGTCATCGAGAAGTCGCGAGGGATCGGAGGA
TTGTGCAGCGAATAGCTTTGTCGTCGTGCACTGTCGATTAACAGCTGAGG
GACGATGCGATATCCGAGATTGCTTGGCCAAGCTATATTCCATGGGCTTG
ACCAGTCTCATGGTCGAGGGGGGAGCGACCGTGATCTCGTCTTTTTTGCG
CGAATTGAACGAGGAGGCGGTGGAGGGGGGAGAAGGGAACGGTTATAGGG
ACGGATATCGTGGCCCGTGCGGCAAGAATCTGGTTGACCGCGTGGTCGTG
ACCATTGCTCCCGCTTTCCTTCAAGGATTCAATGTCTTAACCAAGCCGAG
ATCTGAAGCAGATGATGCTAGCTCGGACGTCTCGACAGGGGGGAGCGACC
GTGATCTCGTCTTTTTTGCGCGAATTGAACGAGGAGGCGGTGGAGGGGGG
AGAAGGGAACGGTTATAGGGACGGATATCGTGGCCCGTGCGGCAAGAATC
TGGTTGACCGCGTGGTCGTGACCATTGCTCCCGCTTTCCTTCAAGGATTC
AATGTCTTAACCAAGCCGAGATCTGAAGCAGATGATGCTAGCTCGGACGT
CTCGACAGGCTTTTCTGTGCCCCTGGTGGACGTAGGCTATGTTCAGCTAG
GGGAAGATATCGTCGTAGTCGGAATGCCTGATGACTGCAACCGTACCCGG
TGAGCTTTTCTGTGCCCCTGGTGGACGTAGGCTATGTTCAGCTAGGGGAA
GATATCGTCGTAGTCGGAATGCCTGATGACTGCAACCGTACCCGGTGA
back to top