mRNA_H-paniculata_contig6477.14302.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6477.14302.1
Unique NamemRNA_H-paniculata_contig6477.14302.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: D7FWJ2_ECTSI (Purple acid phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ2_ECTSI)

HSP 1 Score: 541 bits (1393), Expect = 1.220e-178
Identity = 266/446 (59.64%), Postives = 329/446 (73.77%), Query Frame = 3
Query:    3 YTTHHVNINATSYSSGMLHTATMTNLKPSTTYYYTCGDEELALSTVRSFCTPGVVGVDQPITIGLLGDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILDPAASRIPWMVSAGNHEIEDGSSEGVPFVAYESRFTMPSIAPAIQNMNCSAQGGGLDGNQTACGAGLG----QGLAKMAAFMAADDGLPLTAIAQAARHARDAQDPWRRPVM-TGWPTS-------DLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDRALTPWIIAMFHCPWHNSNVEHQGERQAATSMRTMEPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGAPVYVVVGGSGNREDHNPDYFRPPEWSAYRNGSAFGLGTLSVLNSTSALWEWKSNDVEPMVHDSTWIEN 1304
            Y+THH N++   Y+SG LH+A +  L+PSTT +Y  GDE+LALSTVR F TPGV   +QP+ +G+LGDLGQTNDSR TL ++  H+  I+VVLHAGDL+YA C Q RWD+FM +LDP AS +PWMV+AGNHEIE GS+   PF A++ RF MPS APA++   C   GG LDGN+TACG GL     +G +   +  A   G  +T   QA   AR+A  P+ RPV  TGWP S       D GE E +VP    C PSEWSGTYD+GNSFYSFDVASVHVVVLNPYTATGEGS+QH WL++DL   DR+ TPW++AMFHCPWHNSN+ H GER AAT+M  MEP+LF+++ +L ++GHVHAYERS+PVL+ +      V +VVGGSGN E  +PDY+R P+WSA+RNGSAFG GTLSV+NST ALWEWKSN+ +PMVHD+ WI N
Sbjct:  117 YSTHHTNLDLEEYTSGWLHSAVIQGLEPSTTIFYCVGDEDLALSTVRDFTTPGVFAPEQPLVLGILGDLGQTNDSRNTLDALGRHQPAIDVVLHAGDLAYAECIQERWDSFMRMLDPVASHVPWMVAAGNHEIEAGSTSSGPFAAFQHRFRMPSEAPAVRGFECGVAGG-LDGNRTACGPGLNDLSTKGASAKESEAAEFGGEWMT---QAVLGAREAVAPFERPVSSTGWPESEGGGGEEDEGEVEGLVPK---CSPSEWSGTYDFGNSFYSFDVASVHVVVLNPYTATGEGSVQHSWLVEDLDGCDRSRTPWLVAMFHCPWHNSNLAHPGERMAATAMHAMEPVLFQHKASLAIAGHVHAYERSLPVLSGQLNDAGLVNLVVGGSGNNEGRDPDYYRLPDWSAFRNGSAFGFGTLSVMNSTMALWEWKSNEDDPMVHDAAWISN 555          
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: D8LBI4_ECTSI (Purple acid phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI4_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 4.180e-149
Identity = 241/444 (54.28%), Postives = 311/444 (70.05%), Query Frame = 3
Query:   39 YSSGMLHTATMTNLKPSTTYYYTCGDEELALSTVRSFCTPGVVGVDQPITIGLLGDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILDPAASRIPWMVSAGNHEIE-DGSSEGV-PFVAYESRFTMPSI-APAIQNMNCSAQGGGLDGNQTACGAGLGQGLAKMAAFMAAD-----------DGLPL-----TAIAQAARHARDAQDPWRRPVMTGWPTSDLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDRALTPWIIAMFHCPWHNSNVEHQGERQAATSMRTMEPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGAPVYVVVGGSGNREDHNPDYFRPPEWSAYRNGSAFGLGTLSVLNSTSALWEWKSNDVEPM-VHDSTWIENPY 1310
            Y+SG LH+AT+  L+PS+TY+Y+CGD+ L +S+VRSF TP  VG +QPIT+G+LGDLGQT+DS  +LA++    S I++VLHAGDLSYA+CDQ RWD+FM +LDP ASR+PWMV+AGNHEIE +G+  G  PF+AYESRF MP++ AP      C A GGGLDG+   CG G G   A  AA   A+           +G+        A+ QAAR  R A D       TG      G E+   P  V CCPSEWSGTYDYGNSFYSFDV  VHVV LNPYTATGE S+Q+ WL +DL   DRALTPW++ M HCPW+NSN+ HQGERQA T+MR MEPLL +++ A+V++GHVHAYERS PV++ E     P+++VVGG+GNRE H  D++  PEWSA+R+G+ +G G LS+ +S+ ALWEW ++  +   +HD  W+ NP+
Sbjct:  131 YTSGFLHSATLQGLEPSSTYFYSCGDDTLEMSSVRSFDTPPKVGPEQPITLGVLGDLGQTDDSAASLAAIDGDNS-IDLVLHAGDLSYADCDQPRWDSFMRMLDPVASRLPWMVAAGNHEIETNGAYPGAKPFLAYESRFRMPAVGAPTDLGRGCGA-GGGLDGDGYLCGEGWGADEADAAAIEEAERLSSPVGTRGGEGVAAGNTVGAAVRQAARGVRMAFD------ATG-----EGSEDEQPP--VSCCPSEWSGTYDYGNSFYSFDVGPVHVVALNPYTATGENSVQYSWLQKDLESADRALTPWLVVMMHCPWYNSNLAHQGERQAETAMRAMEPLLHQHKAAVVITGHVHAYERSHPVVDFELAEDGPIHLVVGGAGNREGHAADFYPKPEWSAFRDGTVYGSGRLSIRSSSLALWEWTASTRDTAGLHDVAWVSNPF 559          
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: A0A6H5KE14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE14_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 2.020e-110
Identity = 184/314 (58.60%), Postives = 222/314 (70.70%), Query Frame = 3
Query:  408 GSSEGVPFVAYESRFTMPSIAPAIQNMNCSAQGGGLDGNQTACGAGLGQGLAKMAAFM---AADDGLPLTAIAQAARHARDAQDPWRRPVM-TGWPTS-------DLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDRALTPWIIAMFHCPWHNSNVEHQGERQAATSMRTMEPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGAPVYVVVGGSGNREDHNPDYFRPPEWSAYRNGSAFGLGTLSVLNSTSALWEWK--SNDVEPMVHDSTWIENPY 1310
            GS+   PF A++ RF MPS APA++   C   GG LDGN+TACG GL     K  +     AAD G     + QA   AR+A DP+ RPV  TGWP S       D GE + +VP    C PSEWSGTYD+GNSF   DVASVHVVVLNPYTATGEGS+QH WL++DL   DR+ TPW++AMFHCPWHNSN+ H GER AAT+MR MEP+LF+ + +LVV+GHVHAYERSVPVL+ +      V +VVGGSGN E  +PDY+R P+WSA+RNGSAFG GTLSV+NST ALWEWK  SN+ + +VHD+ WI N Y
Sbjct:    8 GSTTSGPFAAFQHRFRMPSEAPAVRGFECGVAGG-LDGNRTACGPGLNDLSTKGTSVKESEAADFGGEW--MTQAVLGAREAVDPFERPVSSTGWPESEGEGGEEDEGEVDGLVPK---CSPSEWSGTYDFGNSF---DVASVHVVVLNPYTATGEGSVQHSWLVEDLDGCDRSRTPWLVAMFHCPWHNSNLAHPGERMAATAMRAMEPVLFQNKASLVVAGHVHAYERSVPVLSGQLNDDGLVNLVVGGSGNNEGRDPDYYRLPDWSAFRNGSAFGFGTLSVMNSTMALWEWKASSNEEDTVVHDAAWISNKY 312          
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: A0A835YVM8_9STRA (Purple acid phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM8_9STRA)

HSP 1 Score: 349 bits (895), Expect = 1.480e-106
Identity = 189/433 (43.65%), Postives = 246/433 (56.81%), Query Frame = 3
Query:   39 YSSGMLHTATMTNLKPSTTYYYTCGDEELALSTVRSFCTPGVVGVDQ-PITIGLLGDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILDPAASRIPWMVSAGNHEIEDGSSEGVPFVAYESRFTMPSIAPAI----QNMNCSAQGGGLDGNQTACGAGLGQGLAKMAAFMAADDGLPLTAIAQAARHARDAQDPWRRPVMTGWPTSDLGEEEPVVPNEVD---CCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDRALTPWIIAMFHCPWHNSNVEHQGERQAATSMRTMEPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGAPVYVVVGGSGNREDHNPDYFRPPEWSAYRNGSAFGLGTLSVLNSTSALWEWKSN-DVEPMVHDSTWIENPY 1310
            Y+S +LH AT+T L P  TY Y+CGD     S  RSF  P   G    P  +G++GDLGQT DS  TL  +     P+ VVLHAGDL+YA+C+Q RWD++  + + AA+R+PWM +AGNHEIE   S G+ F AYE+R+ MP+  P +     +M+ +A G G D                                                PV  G   S+  +++ +   +     C PSEW G YD+GNSFYSFDVA+ HVVVLNPYT    GS Q  WL  DLA +DR++TPW+I + HCPW+NSN  HQ E QA     +ME ++ + R ALV+SGHVHAYER+ PV       GAPVY+V+G  GNRE H    + PP WSA R+  AFG G L+V N+T A WEW+ N D    + D++WI NPY
Sbjct:   66 YTSPLLHRATLTGLAPGETYAYSCGDSARDRSAQRSFRVPPARGDGSAPFVLGVVGDLGQTADSAATLMHIQEEPLPL-VVLHAGDLAYADCEQDRWDSYGRLAEAAAARVPWMTAAGNHEIELEPSTGLAFTAYEARYAMPAARPPVVRAPPSMSAAATGEGGDS-----------------------------------------------PV--GHEGSNFVDKKQIKARQAGGYACTPSEWLGRYDFGNSFYSFDVATAHVVVLNPYTPARAGSPQQRWLAADLAALDRSVTPWLIVITHCPWYNSNFAHQLESQAVAMKESMEGMIADARAALVISGHVHAYERTHPVRGWARRDGAPVYIVIGDGGNREGHARGLYAPPHWSAARDDGAFGHGRLAVANATHARWEWRRNRDGAAQLGDASWIVNPY 448          
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: A0A7S2CG88_9STRA (Purple acid phosphatase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG88_9STRA)

HSP 1 Score: 311 bits (798), Expect = 4.530e-93
Identity = 175/451 (38.80%), Postives = 240/451 (53.22%), Query Frame = 3
Query:    3 YTTHHVNINATSYSSGMLHTATMTNLKPSTTYYYTCGDEELALSTVR-----SFCTPGVVGV------DQPITIGLLGDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILDPAASRIPWMVSAGNHEIEDGSSEGVPFVAYESRFTMPSIAPAIQNMNCSAQGGGLDGNQTACGAGLGQGLAKMAAFMAADDGLPLTAIAQAARHARDAQDPWRRPVMTGWPTSDLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDRALTPWIIAMFHCPWHNSNVEHQGERQAATSMRTMEPLLFEYRTALVVSGHVHAYERSVPVL--NHEPLTGAPVYVVVGGSGNREDHNPDYFRPP-EWSAYRNGSAFGLGTLSVLNSTSALWEWKSNDVEPM--VHDSTWIENP 1307
            YTT  ++   T YSS  +H   +  L+P TTY Y+ G ++   +        +F T   VG       DQP+T  ++GDLGQT+DS  T+  +LA E  I  VLHAGDL+YA+C   RWD++  ++ PAASR+PWMV  GNHEIE     G  F A+E+RF MP++A A+Q  +                                                                           P E +C PSE+ G YDYGNSF+SFD   VH++ +N YT    GS Q+ W++ DL+ V+R  TPW+  +FHCPW+NS+ +HQ E QA +    +EP+   YR   V +GHVHAYER+ P++      ++   VYVVVG  GNRE H  DY  PP +WSAYRNGSAFG G L++ N++ ALWEW+  D++P+    DST++ NP
Sbjct:   40 YTTTSISTGRT-YSSDFIHHIDVIGLEPETTYLYSVGLQKTYQNGFYPLDEFNFTTAPSVGFFPGYAHDQPLTFAVIGDLGQTSDSASTVDHILA-EPDIAAVLHAGDLAYADCKDTRWDSWSQMVQPAASRLPWMVCPGNHEIETDKFTGATFTAFEARFRMPAVAQAVQAPS---------------------------------------------------------------------------PTEGECTPSEFMGVYDYGNSFFSFDYGPVHIIFMNSYTNASAGSAQYGWVVSDLSAVNRVKTPWVFVLFHCPWYNSDDDHQDEFQAVSMQAALEPVFLNYRVNAVFTGHVHAYERTHPLVLDGVVDVSRGIVYVVVGDGGNREGHADDYNTPPPDWSAYRNGSAFGHGRLTLYNASVALWEWR-RDIDPVSVTQDSTFLLNP 412          
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: A0A482RNP1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNP1_9ARCH)

HSP 1 Score: 286 bits (731), Expect = 7.840e-84
Identity = 160/427 (37.47%), Postives = 215/427 (50.35%), Query Frame = 3
Query:   39 YSSGMLHTATMTNLKPSTTYYYTCGD-EELALSTVRSFCTPGVVGVDQPITIGLLGDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILDPAASRIPWMVSAGNHEIEDGSSEGVPFVAYESRFTMPSIAPAIQNMNCSAQGGGLDGNQTACGAGLGQGLAKMAAFMAADDGLPLTAIAQAARHARDAQDPWRRPVMTGWPTSDLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDRALTPWIIAMFHCPWHNSNVEHQGERQAATSMRTMEPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGAPVYVVVGGSGNREDHNPDYFRPPEWSAYRNGSAFGLGTLSVLNSTSALWEWKSN-DVEPMVHDSTWIENPYF 1313
            Y SG +H   ++ L+P T Y+Y CGD +    S   +F T   VG  QPI  G+LGDLG T DS  TL  VL +   + ++LHAGDLSYA+C+Q  WD +  +++  A   PWMV  GNHEIE  +++G  F+A+E R+ MP+I PA                                                                  G  T   G +    P    C  S +   Y+YGNSFYSF+  S HV+ LNPY+ T   S+Q+ WL+QDL  V+R +TPW+I + HCPW+NSN  H GE QA     +ME + ++ R  +V +GHVHAYER+ PV  +E  +   VYV +G  GNRE H   Y+  P WSAYRNG+ +G G LS+ +     W W  N D E    D   + N  F
Sbjct:   22 YESGTIHHVQLSGLEPGTLYFYECGDFDNGKTSGSLNFRTLHPVGSKQPIHFGVLGDLGTTTDSSSTLQHVLTNPF-LSMILHAGDLSYADCNQPVWDQYGVLIEDLAKLRPWMVGPGNHEIEF-NTDGSTFLAFEERYKMPAIKPA----------------------------------------------------------------EIGKITIPPGTDSSGHPY---CASSVFQQDYNYGNSFYSFEAGSAHVIFLNPYSTTDASSVQYNWLVQDLQGVNREVTPWVIVVMHCPWYNSNQAHYGELQAVLMRESMEEVFYKNRVNIVFTGHVHAYERTYPVFRNETRSDGVVYVTIGDGGNREGHANTYYEQPSWSAYRNGTQYGHGELSLWSRDKLTWRWVRNVDGEIFSKDELTLCNSAF 379          
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: A0A812QP08_SYMMI (Purple acid phosphatase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812QP08_SYMMI)

HSP 1 Score: 277 bits (708), Expect = 2.400e-78
Identity = 170/472 (36.02%), Postives = 225/472 (47.67%), Query Frame = 3
Query:   39 YSSGMLHTATMTNLKPSTTYYYTCGDEELALSTVRSFCTPGVVGVDQ-------PITIGLLGDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILDPAASRIPWMVSAGNHEIEDGSSEGVPFVAYESRFTMPSIAPAIQNMNCSAQGGGLDGNQTACGAGLGQGLAKMAAFMAADDGLPLTAIAQAARHARDAQDPWRRPVMTGWPTSDLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDR--ALTPWIIAMFHCPWHNSNVEHQGERQAATSMRT---MEPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGAPVYVVVGGSGNREDHNPDYFRPPEWSAYRNGSAFGLGTLSVLNSTSALWEWKSNDV------------------------------------EPMVHDSTWIENPY 1310
            Y+SG +H   +  L   + Y YT   +  A  T RSF T    G          P  +G++GDLGQT DS +T+  + A  S ++++LHAGD++YA+ +  RWD++   ++P +SR+ WMV  GNHEIE     G  F AYE+RF MP++ PA    +           Q  C                                    Q PW R    G                 DC PS +SG+YD+GNSFY+ D     V+ LN YT TG  S Q+ WL ++L  + R  A TPW+I M HCP+++SNV HQ E QA   MR     E LL  +  A+V+SGHVHAYER+ PV  +    GAP Y+VVG  GNRE H  DY   P WSA+RNG  FG G LS++N T  LW W++ND                                     +   +DS WI NPY
Sbjct:   92 YTSGRIHRVQVNGLVAGSKYAYTLHGDLPA--TARSFKTLPASGKPNSPSDPRFPFVVGVIGDLGQTADSEETVRHLDADRS-LQIILHAGDMAYADTESRRWDSYGLKVEPLSSRLQWMVCPGNHEIESDYYTGESFKAYEARFAMPAVQPAESRPSK---------RQIGC------------------------------------QSPWPRGSHPG----------------ADCTPSIFSGSYDWGNSFYAVDAGPARVISLNSYTDTGPQSAQYNWLKEELEALARRRAATPWLIVMMHCPFYSSNVAHQSESQAI-EMRDAHGFEDLLHAHAAAVVISGHVHAYERTHPVYKNVTQPGAPTYIVVGDGGNREGHAKDYMPQPGWSAFRNGLDFGHGRLSIVNQTHMLWAWQTNDATQPPALNKEDAARRAAELEQAGATFNADSAWRMPLAQRSAYDSVWIHNPY 498          
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: A0A485LRJ2_9STRA (Purple acid phosphatase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRJ2_9STRA)

HSP 1 Score: 266 bits (679), Expect = 5.880e-76
Identity = 160/426 (37.56%), Postives = 216/426 (50.70%), Query Frame = 3
Query:   39 YSSGMLHTATMTNLKPSTTYYYTCGDEELALSTVRSFCTPGVVG-VDQPITIGLLGDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILDPAASRIPWMVSAGNHEIEDGSSEGVPFVAYESRFTMPSIAPAIQNMNCSAQGGGLDGNQTACGAGLGQGLAKMAAFMAADDGLPLTAIAQAARHARDAQDPWRRPVMTGWPTSDLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDRALTPWIIAMFHCPWHNSNVEHQGERQAATSMRT-MEPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGAPVYVVVGGSGNREDHNPDYFRP-PEWSAYRNGSAFGLGTLSVLNSTSALWEWKSNDV-EPMVHDSTWIEN 1304
            Y+SG +H   + +L PS TYYY  G +    S+V SF TP   G ++ P+T G+LGD+GQT  S +TL S+ +HE  +  VL AGDLSYA+  Q RWD++ T+++P+ S IPWM++AGNHEIE  S     F AY++R+ MP                                         A+ G P                                                       GN FYSFDV SVHVVVL PY  T   S Q++WL +DL  VDRA TPWII M H PW++SN  HQ + +   +MR  ME LLF++R  LV++GHVH+YER++PV  ++    AP+Y+ +G  GNRE     Y  P P WSA+R  + +G G L V N +  L+EW  ++  E  V DS WI +
Sbjct:   87 YTSGYMHHVLLEDLSPSETYYYVVGGDAYGWSSVLSFQTPPKRGDLNAPLTFGILGDMGQTKYSEETLGSIRSHEHSLNAVLLAGDLSYADTVQSRWDSWGTLVEPSTSTIPWMMAAGNHEIEI-SCRLSTFDAYQARYRMPF----------------------------------------AESGAPR------------------------------------------------------GNLFYSFDVGSVHVVVLTPYIPTASASDQYKWLARDLNAVDRARTPWIIVMMHGPWYSSNRAHQNKIEPQHAMRRDMEDLLFDHRVHLVLAGHVHSYERTLPVYKNDLTVNAPIYITIGDGGNREGLADKYITPQPTWSAFRE-ARYGYGLLHVKNHSHMLFEWHEDETNEAKVRDSVWIHH 416          
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: A0A812RG62_9DINO (Purple acid phosphatase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RG62_9DINO)

HSP 1 Score: 266 bits (680), Expect = 2.240e-74
Identity = 162/423 (38.30%), Postives = 220/423 (52.01%), Query Frame = 3
Query:   39 YSSGMLHTATMTNLKPSTTYYYTC-GDEELALSTVRSFCT--------PGVVGVDQPITIGLLGDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILDPAASRIPWMVSAGNHEIEDGSSEGVPFVAYESRFTMPSIAPAIQNMNCSAQGGGLDGNQTACGAGLGQGLAKMAAFMAADDGLPLTAIAQAARHARDAQDPWRRPVMTGWPTSDLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDR--ALTPWIIAMFHCPWHNSNVEHQGERQAATSMRTM---EPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGAPVYVVVGGSGNREDHNPDYFRPPEWSAYRNGSAFGLGTLSVLNSTSALWEWKSND 1265
            Y+SG +HT  +  L   +TY YT  GD     ST R F T        P       P  +G++GDLGQT DS++T+  + A  S ++++LHAGD++YA+ +  RWD++   ++P +SR+ WMV  GNHEIE     G  F AYE+RF MPS+ P ++++  + Q G                                       +H   A+ P + P                     DC PS +SG YD+GNSFY+FD     V+ LN Y  TG  S Q  WL ++L  + R  + TPW+I M HCP+++SN  H  ERQ  T MR +   E LL ++  A+V+SGHVHAYER+ PV  +    GAP Y+VVG  GNRE H  DY   P WSA+RNG  FG G L + N T   WEW +ND
Sbjct:   96 YTSGRIHTVQVNGLVAGSTYAYTLFGDSP---STTRHFKTLPASEEPEPRKADPRFPFVLGVIGDLGQTADSQETVRHLDADPS-LQILLHAGDMAYADTESKRWDSYGLKVEPLSSRLQWMVCPGNHEIESDYYTGESFKAYEARFAMPSVQP-VESLPSTKQIG--------------------------------------CKHPFPAK-PHKGP---------------------DCTPSVFSGGYDWGNSFYAFDAGPARVISLNSYANTGPQSAQLNWLREELEALARRRSSTPWLIVMMHCPFYSSNAAHHEERQT-TLMRDIHGFEDLLQKHAAAVVISGHVHAYERTHPVYRNVTKPGAPTYIVVGDGGNREGHAKDYLPQPSWSAFRNGLTFGHGRLVIANKTHMQWEWWTND 452          
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Match: A0A1Q9EB14_SYMMI (Purple acid phosphatase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EB14_SYMMI)

HSP 1 Score: 277 bits (708), Expect = 3.550e-73
Identity = 170/472 (36.02%), Postives = 225/472 (47.67%), Query Frame = 3
Query:   39 YSSGMLHTATMTNLKPSTTYYYTCGDEELALSTVRSFCTPGVVGVDQ-------PITIGLLGDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILDPAASRIPWMVSAGNHEIEDGSSEGVPFVAYESRFTMPSIAPAIQNMNCSAQGGGLDGNQTACGAGLGQGLAKMAAFMAADDGLPLTAIAQAARHARDAQDPWRRPVMTGWPTSDLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVASVHVVVLNPYTATGEGSIQHEWLIQDLADVDR--ALTPWIIAMFHCPWHNSNVEHQGERQAATSMRT---MEPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGAPVYVVVGGSGNREDHNPDYFRPPEWSAYRNGSAFGLGTLSVLNSTSALWEWKSNDV------------------------------------EPMVHDSTWIENPY 1310
            Y+SG +H   +  L   + Y YT   +  A  T RSF T    G          P  +G++GDLGQT DS +T+  + A  S ++++LHAGD++YA+ +  RWD++   ++P +SR+ WMV  GNHEIE     G  F AYE+RF MP++ PA    +           Q  C                                    Q PW R    G                 DC PS +SG+YD+GNSFY+ D     V+ LN YT TG  S Q+ WL ++L  + R  A TPW+I M HCP+++SNV HQ E QA   MR     E LL  +  A+V+SGHVHAYER+ PV  +    GAP Y+VVG  GNRE H  DY   P WSA+RNG  FG G LS++N T  LW W++ND                                     +   +DS WI NPY
Sbjct:   92 YTSGRIHRVQVNGLVAGSKYAYTLHGDLPA--TARSFKTLPASGKPNSPSDPRFPFVVGVIGDLGQTADSEETVRHLDADRS-LQIILHAGDMAYADTESRRWDSYGLKVEPLSSRLQWMVCPGNHEIESDYYTGESFKAYEARFAMPAVQPAESRPSK---------RQIGC------------------------------------QSPWPRGSHPG----------------ADCTPSIFSGSYDWGNSFYAVDAGPARVISLNSYTDTGPQSAQYNWLKEELEALARRRAATPWLIVMMHCPFYSSNVAHQSESQAI-EMRDAHGFEDLLHAHAAAVVISGHVHAYERTHPVYKNVTQPGAPTYIVVGDGGNREGHAKDYMPQPGWSAFRNGLDFGHGRLSIVNQTHMLWAWQTNDATQPPALNKEDAARRAAELEQAGATFNADSAWRMPLAQRSAYDSVWIHNPY 498          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6477.14302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWJ2_ECTSI1.220e-17859.64Purple acid phosphatase n=1 Tax=Ectocarpus silicul... [more]
D8LBI4_ECTSI4.180e-14954.28Purple acid phosphatase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KE14_9PHAE2.020e-11058.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVM8_9STRA1.480e-10643.65Purple acid phosphatase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CG88_9STRA4.530e-9338.80Purple acid phosphatase n=1 Tax=Dictyocha speculum... [more]
A0A482RNP1_9ARCH7.840e-8437.47Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A812QP08_SYMMI2.400e-7836.02Purple acid phosphatase n=4 Tax=Symbiodinium TaxID... [more]
A0A485LRJ2_9STRA5.880e-7637.56Purple acid phosphatase n=1 Tax=Aphanomyces stella... [more]
A0A812RG62_9DINO2.240e-7438.30Purple acid phosphatase n=1 Tax=Symbiodinium natan... [more]
A0A1Q9EB14_SYMMI3.550e-7336.02Purple acid phosphatase n=1 Tax=Symbiodinium micro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6477contigH-paniculata_contig6477:3827..12082 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score525.4
Seed ortholog evalue2.5e-146
Seed eggNOG ortholog2880.D7FWJ2
KEGG koko:K22390
Hectar predicted targeting categoryother localisation
EggNOG free text desc.acid phosphatase activity
EggNOG OGsCOG1409@1,KOG1378@2759
Ec32 ortholog descriptionacid phosphatase/ protein serine/threonine phosphatase
Ec32 orthologEc-26_006410.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons8
Model size3082
Cds size1272
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6477.14302.1prot_H-paniculata_contig6477.14302.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6477 5587..12032 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930754.8799832-UTR-H-paniculata_contig6477:3826..55861622930754.8799832-UTR-H-paniculata_contig6477:3826..5586Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6477 3827..5586 -
1691481437.6667845-UTR-H-paniculata_contig6477:3826..55861691481437.6667845-UTR-H-paniculata_contig6477:3826..5586Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6477 3827..5586 -
1622930755.0183358-UTR-H-paniculata_contig6477:12032..120821622930755.0183358-UTR-H-paniculata_contig6477:12032..12082Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6477 12033..12082 -
1691481437.7596965-UTR-H-paniculata_contig6477:12032..120821691481437.7596965-UTR-H-paniculata_contig6477:12032..12082Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6477 12033..12082 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930754.8915548-CDS-H-paniculata_contig6477:5586..56521622930754.8915548-CDS-H-paniculata_contig6477:5586..5652Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 5587..5652 -
1691481437.678775-CDS-H-paniculata_contig6477:5586..56521691481437.678775-CDS-H-paniculata_contig6477:5586..5652Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 5587..5652 -
1622930754.9037519-CDS-H-paniculata_contig6477:6090..61971622930754.9037519-CDS-H-paniculata_contig6477:6090..6197Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 6091..6197 -
1691481437.68853-CDS-H-paniculata_contig6477:6090..61971691481437.68853-CDS-H-paniculata_contig6477:6090..6197Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 6091..6197 -
1622930754.9172668-CDS-H-paniculata_contig6477:6960..70591622930754.9172668-CDS-H-paniculata_contig6477:6960..7059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 6961..7059 -
1691481437.7007864-CDS-H-paniculata_contig6477:6960..70591691481437.7007864-CDS-H-paniculata_contig6477:6960..7059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 6961..7059 -
1622930754.934216-CDS-H-paniculata_contig6477:7359..75371622930754.934216-CDS-H-paniculata_contig6477:7359..7537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 7360..7537 -
1691481437.7128816-CDS-H-paniculata_contig6477:7359..75371691481437.7128816-CDS-H-paniculata_contig6477:7359..7537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 7360..7537 -
1622930754.950852-CDS-H-paniculata_contig6477:8371..84681622930754.950852-CDS-H-paniculata_contig6477:8371..8468Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 8372..8468 -
1691481437.7234674-CDS-H-paniculata_contig6477:8371..84681691481437.7234674-CDS-H-paniculata_contig6477:8371..8468Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 8372..8468 -
1622930754.9693348-CDS-H-paniculata_contig6477:8887..93451622930754.9693348-CDS-H-paniculata_contig6477:8887..9345Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 8888..9345 -
1691481437.7340157-CDS-H-paniculata_contig6477:8887..93451691481437.7340157-CDS-H-paniculata_contig6477:8887..9345Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 8888..9345 -
1622930754.9837816-CDS-H-paniculata_contig6477:9737..98251622930754.9837816-CDS-H-paniculata_contig6477:9737..9825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 9738..9825 -
1691481437.7415524-CDS-H-paniculata_contig6477:9737..98251691481437.7415524-CDS-H-paniculata_contig6477:9737..9825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 9738..9825 -
1622930755.0019066-CDS-H-paniculata_contig6477:11853..120321622930755.0019066-CDS-H-paniculata_contig6477:11853..12032Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 11854..12032 -
1691481437.7515297-CDS-H-paniculata_contig6477:11853..120321691481437.7515297-CDS-H-paniculata_contig6477:11853..12032Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6477 11854..12032 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6477.14302.1

>prot_H-paniculata_contig6477.14302.1 ID=prot_H-paniculata_contig6477.14302.1|Name=mRNA_H-paniculata_contig6477.14302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=424bp
MLHTATMTNLKPSTTYYYTCGDEELALSTVRSFCTPGVVGVDQPITIGLL
GDLGQTNDSRQTLASVLAHESPIEVVLHAGDLSYANCDQMRWDTFMTILD
PAASRIPWMVSAGNHEIEDGSSEGVPFVAYESRFTMPSIAPAIQNMNCSA
QGGGLDGNQTACGAGLGQGLAKMAAFMAADDGLPLTAIAQAARHARDAQD
PWRRPVMTGWPTSDLGEEEPVVPNEVDCCPSEWSGTYDYGNSFYSFDVAS
VHVVVLNPYTATGEGSIQHEWLIQDLADVDRALTPWIIAMFHCPWHNSNV
EHQGERQAATSMRTMEPLLFEYRTALVVSGHVHAYERSVPVLNHEPLTGA
PVYVVVGGSGNREDHNPDYFRPPEWSAYRNGSAFGLGTLSVLNSTSALWE
WKSNDVEPMVHDSTWIENPYFLE*
back to top

mRNA from alignment at H-paniculata_contig6477:3827..12082-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6477.14302.1 ID=mRNA_H-paniculata_contig6477.14302.1|Name=mRNA_H-paniculata_contig6477.14302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8256bp|location=Sequence derived from alignment at H-paniculata_contig6477:3827..12082- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACTACACGACCCATCACGTCAATATCAATGCGACATCCTACAGCAGCGGC ATGCTACATACAGCCACGATGACCAACTTAAAGCCGTCAACCACGTATTA TTACACTTGCGGCGACGAGGAACTCGCCCTTAGCACTGTTCGCTCCTTTT GCACTCCTGGGGTGGTTGGGGTCGATCAGCCAATCACCATCGGCCTCCTG GGCGACCTTGGCCAGACCAATGATTCCAGGTGAGTGGGAAATGGTTGAAG TGTCATGCATTGGTACCGTACCGTAATGGAATTGGTCAGAAATTCAACGT TTTGAAATTCTTATCGGGGTATGGTTTGCGTTGTATCTTATCATGACTTT TTTTTTTAAGCTTGCGGCGTCACTACGTTGACTATGGTCGCTGCAAGATG ATGACCTTATCGCGACGTTTCAAGATTTAATCCCCAACACCCACCGCGAT CTATCTCTTCCACGTTTCATTGAAATGGTTCTTCCATATGTTCAGACGTA TGGTGGATGTCATGATTGAAGCCGATCTCGGCGTGGTCCCTGTTGGCGTA GATACGTCCAGCGTTTGGATCGGTGTTATATATTATTGCGTCTTCTAACG GCTTGTGCAATACTGGTTGTGGTTTCTGGCGTGAACAGCATATCCATGTT AAAAATTCCAGCTACTACTCGATATTTGTATGTTTTTGCTACTTTAAATC GGCTGTTCGAATTTTGCCGTAGATGAGCAGCTGTGGCGATGTGGCAAACA AAGGTGACTTCAGTGGCCATTTTGCTCACCTTTTTGTATGTGTTGATCCG CCTCAGCTGATCAAATCGTTCTAACTACAATTGATCAAACGATTATGTAC CTCGTCGTATCAGTTAGCGTTAGCGGATCAGGATACGCTCTCCCAAAGTC TTGACAATCGGCGGCGTGGATATGTGCAAGCTTTCCGAAGACAGATGAAA AAACGGAAGGTTTCTTCAGAAGTGTATTGGTCGTTTTTTTATTGTTCGGA TTTCCTGAGTAACCCGGCTATCCGTGAATCATTGCAGAGTGATCGATGTG GGGTGGTGGACAAGATCGGCCTTCTCAATTTCTATGTTAGAAGTCAAGCA TCACATCTCATGCAAACAGAGATAACACCGGACTAATATCCTTTTTCAAA GGGACAATTTTAATATCGACATATGTTCGTTGCAGAACGGACATTTATAA AACCTATAGCTACTATCCATTGCAGAGCGGACATTATAACACTGAGCCAA TATCCGTTGCAGATGGGACAGCTGTATCACCGAGTTATTATCTGTTGCAG AACGAACAATTTGAACAAATACCATCTCCTAGATGAGCAGGTGTCAGCCA ATGATTATAGTTCTAATTGCCGAACAGGAACATGAATATTTTCCACCTCT TTTTTTTTACTGAGATACTTATGATCGTTATCTTCCTATTGGACATGCTT ATGATTGTGTTCGTTGGTGAACGATTACATATCAACCATAGTTCGAGCCA GTATTGACGCTACGGTCGTATATGTTTGAGTATACTCTGCCGGTACAGAT TTAAAAGTCAGTACTGTTATTCTACAAATAGAGACAGCACAAAGATACCG CAAAGATATGATCTATGGAGATATCGGCCGCAACGTACGGTGACGACATG CCGTATTTCTGCTGGCATCATGAGCTTTGTATCGGGTGCTACGTTCCTGT TAGCACCGCTAGCTTGCTTGGGCTACTGCATTACCGTCTTAGAGTTAATG GTCAAATTAGTAGCATGGCATATCTGTGAACGCGACATCGTTTTGGCAGT GTGTAGACCGCTATTCACGGTAAGAAATGAACAATCCATTTGCTGAGCAC TTCTAGAAGATGCCAAGCCGGCAAGGTCGCATCATACCTCGATGTTCGAA TCCAGTGCAACGCAGGCCAACGGCAAAACCGTGACAAGTCCATATCTTGC GGTTGCCAGGATGGCGTAGGGGGGTATGTTCGGCGTGATCGTTACAGCAG TTATAAGGTCATATGCTGTTCGGTGAACATGCTATACAGCCTTTTGCTGA GCTTAAGTGCACGTATTGGGATGAGCGGGCATGCAGGCAGGGGTTCCATC GCCCGTTCATCGGCAACGTCGGTCTTACCCCTGTGGCTAACCTCGGACCA CGTGTTTAGCGATGAATTCACGCATACTGCGTTATCATTACCGAGCACGA AATGTCAACATCCGTGGCTACGTCCTGCAACATCCCCACTTTACCCCCTC CCTGCAGGCAGACTTTGGCATCCGTCCTGGCGCACGAATCCCCGATTGAG GTGGTCCTACACGCTGGGGACCTGTCCTACGCTAACTGTGATCAGGTAAA ACATTTTCTGGAAGACTCATTGCCTTGAACAATTCTGCGGCGAACATACT CGTAGAGACGGCGATTTCAGTGGTATTTTCTCTGCGAGCGTAGCAAGTAC GTTTTGTTTTAGATGATGACCTAGTCCGTCGCAGACTTGTCATCAAGATA TGCGCATGACTGGCAAAGCCGCCGCTGCGTAAGCACCAAAGCTCTAATAC GGGATCGACTAAGCTTCTGCGGTGTACTCGCACACGTTCGCTTTTTTCTT CGTTCTAGAAAAGCCCTCGAATTTCCAAGTTTCACGAAGAGAACAAAAAG GTGTATTTCTGCGTCTGACGCACTGACAACGAATCGCACCTCCTTTGCAC TGCCCCCCTCTCCCCCCCCCCCCCGACTCTTTGGCAGATGCGTTGGGACA CGTTCATGACGATATTGGACCCGGCTGCGTCCCGAATACCCTGGATGGTC TCTGCCGGAAATCACGAAATAGAGGACGGCTCGTCCGAAGGGGTTCCGTT CGTAGCGTACGAGAGCCGCTTCACGATGCCTTCTATCGCGCCTGCGATCC AAAATATGAACTGCAGTGCCCAGGGCGGTGGGTTGGATGGCAACCAAACG GCTTGCGGGGCGGGATTGGGCCAAGGGCTAGCTAAAATGGCTGCATTTAT GGCTGCCGATGATGGGTTACCGTTGACCGCCATTGCGCAGGCCGCACGGC ACGCGCGAGATGCCCAGGACCCATGGCGTCGACCTGTGATGACAGGGTGG CCTACATCTGATTTAGGAGAGGAAGAACCCGTGGTTCCGAATGAGGTGGA TTGCTGCCCGTCTGAGTGGTCGGGTACGTACGACTACGGAAATAGGTGTG TTGTGTATGTTGGTAGGTGTGGAATTGGCTTGACATGGGTGGGCGGTCCA GTAGGACCGTTTTGGCGTTGTTTTTGGCGTTGTGATAGTTAAATGACTTT TGGGAGCTGGTGTTTTGCGGTCAACGGCAGCGGGTTGGTGGACGTGGAGT TGATGTCTGATTTAGGTGATGCGTACAATTTGATACCTCTAGACGGATGA ATACCCAATGCACATTTATGAACACAGTGCAGACATACCGTCAACGACCC AGCAGCATATTTTGGTTCATTTCTAGGGGATGCTAGAGTATCAACGTCAA TATGTAGGTTACCCGTGCCGTTTTTCGAGTTTACCTCTCCCGTGAAAACC TGTGTCTTGATGCTGTTTCGATCTTCCCGCCTTGTCGCACCATCACTGGC TTCGTTTGCCACAGTTTTTATAGCTTTGATGTGGCGTCGGTGCACGTGGT GGTCCTTAACCCCTACACGGCAACAGGGGAGGGCTCGATCCAACACGAGT GGCTGATTCAGGTACGGTACTGCTCGTTACCAAGAAGGTGTGCTAGTAGT GTCGAGGTCTTGCGTTTCCTAATATGTTGCTGTATCGTGCGTAGTATGTT GAATTGAGGTGATGTCGTTTCAGCTCACGGAACTTGCTGGTGGACCAGCA CAAGTGGTCTGATACTTTTGTTACTTTGCTGAGACCGAGCTACACACTCT GCTGGGTTTGCGCGCTGTTTCTGAAACAGCCTCCAAATTTGGCCGTGCAT AGAAGCTACGTTTCCAATGCCTTGATGCTCCTTTTGTTGCATAACCCGCG CACACAAGCTTGGACTTGGACGACGTGTAATTGCTGGTGTCCTCTCATGG ACTGCTTGACGTCTTTCCGCGAGCAATTGGCGGGTATGAAATGCCATTGT TTGACTACAACCTATGCGTTGTTACCTCAGATATTTAATTGATGGGATGC TGGGACGTGCTCGCAGGAAAAAAAACATTTGCAAGCTATTTCAAACGGCA AAACAACAGTGTCACCAACAGAATAGGATAAACGGCAGCGCGATTGCGCC CCATCGGCGAGTCTACAAACGTCCATCACATTTGCCGGATTGTGCTTATG GGTCTTCACTAGCTATTTTAGACGATTTATCAACACGAGCTCCGACAACC CTTCGTCGATTTTGGACTCATATGCGCGAAAACCTCAGTAGTTTGGAACT CTTTGAGGTTAGATATTAATCTGCGGCTACCTCATCCAACCTCCCTGGCG GACTGCTAATAGTTCGTCCCGCCCTTGCCCTGCGTGCCCTGTCCTATCTC TTACCGTAATATGGCGCTTTTGCACTGAATACACCAACACCGTAGGATCT GGCCGACGTGGATCGGGCGTTGACCCCGTGGATAATTGCCATGTTTCATT GCCCGTGGCACAACTCCAATGTGGAGCACCAAGGGGAGAGACAGGCAGCA ACGTCGATGCGTACGATGGAGCCTTTGCTGTTTGAATACAGAACAGCCTT GGTTGTGTCCGGACACGTACATGGTACGGGAAATAAAAGGGGTTCGGACG CTTCTTGGCTTTGTAGAGAATCGTGACCGCTATTAATAGCTACGAGGTTT CGAAGAGGGCATGGATCAGCCTGCGCCATCATCGAGATGGAGAATTATTA TGCAGTCCCTTCCGGCCGCATGGTGTACCCTTTCTAGTTCTATGCTCAAA TATATTCATGGCAACTATTGTCCAGGCAGGGTGCACATGGCCGCGTACGT ACCCGACATGCCGATGATCACCGAATCGCTAATCATTGCGATGCAACGTT TTCGTTGATTTCAATGCTGACAGCGTACGAACGGTCTGTACCAGTCCTCA ACCACGAGCCGTTGACTGGAGCTCCGGTGTACGTGGTCGTGGGAGGCTCC GGCAACAGGGAAGATCATAACCGTAAGTTGATTTTTTTGCCTCGCTGGCA TTGTAGGCCTTAGCAAAGCGGCATTGCACATTGGATTCGTAGCTGTATAT GATACACGTGGGTAGCTGGATACGAATACCGTTGAAGAGTACAACATAAA TATGCGATCAATTATTGTATAATCGAATATGATAAAACCAATCAACGCGT ATAGGTGGATGGGATAGAAATTTCAAATATCGAAATACCGCAGACACGCA TTTTTCTTTTGTCGGCAGCGGGGGGGCTTCGCACTGCATGAGCTAATTCA TCATACGGTGCGAGCATCAGGGAGACTCAGAGTATATCCAGGCACTTCAC AGTATTGCACGCCCCGGACAAGTACGAATACAAGACACGAATAAATACGA GAAATCTGGAACGAATGCTTTATCTGTTTGAGTTGGGGCAGATGTCCCTG TGACGCGAATAATATGCATTGTATTCGATATACCATGGAGCATCGAAAAG CTGGGGCAGGTAGAGTATTCAATCTGTACAGTATCACCCGGAAAATAAAC AGGACCTGCATGTGTGACTGCTCGCCGGGTACACGACCACCTGGTGACCA TCTGTAGAGTGGTCATTGATGGACTTGTAAACGAATACATACGTGTCTAC CCAAGACAAATAATGACAGTTCGAGATGGTTGCGAATGCTCCACTCGTAT TTGTCCGGGGGGTGCATTATTGTGCCGTGCTTCCTCTGTTGCTTGCCATG CGCTGCCCATGTATTTTTTACGATGTTGCCAACAGCGGACTATTTCAGAC CTCCTGAGTGGAGCGCGTACCGAAACGGGAGTGCGTTTGGACTGGGGACC CTGTCGGTGTTGAATTCAACCTCGGCACTATGGGAGTGGAAGGTGAAATC AATGACACAATGTCGAACAATATTCTAGCAGCTCCCAGAATTTGTATGTC CGCAGCGTGCTCCTTTGCTGTCTGATCCACAGCCGTTCCACTGCCAGCAC GAAGGGGCAGCGATGCGCAATAGTAGAACAGCCACATGAAAATATCATAG AATAGCACAAGCACTCGGTGTGACGCAGCAATGCTCTCCACACAATATGC CCGGAGCCGTCCGCAAACCGACACATGAAAACTCACCGGCCCTCTTTTCG GTACCTCGACTGACGCACAGTAATGATTCTCGTAAAAAGCATGTACATCC TCGCGCTTCAAGACACTCGAGAGAGGAAAGGTGTGATACGAAGCACCTGC TTTGTTTGCGTCGTCGCTCATATAACGATATCTCCTTCTATTTCCGTTTC TTCCCGTTTGTAAATATATATTGCCGCCAGTCGAACGACGTGGAGCCAAT GGTGCACGATTCTACGTGGATCGAGAATCCTTACTTCCTAGAGTGACGTG GTATGTGCTGTGAATAGCCCTAGATGTTTCGTTGCGTGTTGTTTGAAGAT TACAGACTATTCAGAAAAAATTATGTCGATGTGGGGGAGTGCGCTTGTAT TACTGCTACAGGCGCGACGCTTTAACCCCACAGATATCTGTGTTACAAGA CCATACATTTGTGTGGTACGTGCTTTGGACGTGTTGGTTGTACTCGTGTT GCAAACGATTTGTATCTGGATTACGTGCGTCACGCGCAGTTGAAAAAGGG TCAAAGGCCCATATTTCGTTACTTGTTGGAGCAGCCAGTAACGTTGCGTC GCGTCTCGCATGTTAACTCTCTTATCCCGGTGTTTTTTAGTTGTTTCCAT TTTTGGCGGTAGGTGTCAGGGCAGCAACCCTGGGAACTGGTGTGGTGTGG AGGGTCTGTGTTCCAAACAAGAATACCTCTGGTGGTCGAGCTTGCAAAAT GGAGCGTCCTAAATTCTTTCTTCTTGCGGTGGGCAGCGTGTACATCACTA GCAGAGAAGTAGCGAGTACTCAAGTATCGATGTATGGCGTGTGTTTCTCC CGATGTACAGTAGGGAATACCTCGACGGCTCACTCAGTGCAGCGGTGTGG GACCTAGTTCCAGGGTTGGGGCTGTGGGGTCAATTTTTGCGTCTGACATG GAACGTTGTTTTTCCCGTGTTAGTGTTAGTCTGCTCGTGTCGTCGCGAAA CGTTTTTGCATATATGTACTATAAGTATATACATTCCCCCTGGTGAGAAT TACAGGCTGGGCCCAGCAAGAAAGACCAAAAACGTTCGACAGGCACTTCT CACTTGGCTTTTTGGAGTTTTGGACCTGAAAATTTGAGGTTAGGTGCGCA TAAATAATTCGGAGGCCATCACAGATGTTACTTTATGGATCATTAGACCA TAAAATGATCAAAGTGCCATTATTTTCGCAACACAAAAACAAAAGGTATC ATCTCTGACGGCCTACGAAGTTTTGATGCGCACCTACCCTCAAAATTTCA GGTTTAAGCTTGAAAAAACCAAATGAGAAATGCCCCTTTTGTAGAAGTAT ATACGGACCTCCTAATTCCATACAAGAATGTAAATATTCTACCTCAATTT TGCTTCAGCCATAACTTTTGAACAGTGGCGAGTTGGGAGCCCAAACTGTT GTCAAGGTTCCCGTCGTGGTGTCCGCGATACGTGTCCCAATTTTGAGAAG AATTGGGCATGAATGGGGCACAACTGGAAAATATGTGACTTTTGTATCAT CATATTTGGATTCTAATAGCTCGCAGTCCATATTTCGTATCGTCATATAC TTTGAAATGCTGGAAGAGCCCGGATGACCGATCAGAGCGTGCAGCGCACA CCGCGGTGCTTACACGATTGCAAGCAGAGCCACATTTGTGGTAGTTTTCG CTTTGGATGGTGACATTTGGCCTGTGGAATGTTTTTGGTGTATTTTGACG GGCCGAGCTGTATTTGCAAGAAATCAACTTACAGCAGAGAATACCTCGAC GGCTTACCCAATGCAGTGGCGTGGGACCTAGTTCCAAGGTTGGGGCTATT GGGTCTGAGTATGGCATCGAATATTGTTTTTCCTGTGTCCCCGGTAGTTT GCTCGTGTCGTCGCGAAACGTTTTTGCAGGCACGTACTATGAGTATATAC TCCCTCTGTCCCGTAAGTCTGCGACGTTATGATTTCTCATTTCTGGTGTA GGCCGTTTCTCTACGAATCCGAAAAGTTTTTTGGCCATGTACGGCTTGAA TTGCAC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig6477:3827..12082-

>mRNA_H-paniculata_contig6477.14302.1 ID=mRNA_H-paniculata_contig6477.14302.1|Name=mRNA_H-paniculata_contig6477.14302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2544bp|location=Sequence derived from alignment at H-paniculata_contig6477:3827..12082- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTACATACAGCCACGATGACCAACTTAAAGCCGTCAACCACGTATTA
TTACACTTGCGGCGACGAGGAACTCGCCCTTAGCACTGTTCGCTCCTTTT
GCACTCCTGGGGTGGTTGGGGTCGATCAGCCAATCACCATCGGCCTCCTG
GGCGACCTTGGCCAGACCAATGATTCCAGATGCTACATACAGCCACGATG
ACCAACTTAAAGCCGTCAACCACGTATTATTACACTTGCGGCGACGAGGA
ACTCGCCCTTAGCACTGTTCGCTCCTTTTGCACTCCTGGGGTGGTTGGGG
TCGATCAGCCAATCACCATCGGCCTCCTGGGCGACCTTGGCCAGACCAAT
GATTCCAGGCAGACTTTGGCATCCGTCCTGGCGCACGAATCCCCGATTGA
GGTGGTCCTACACGCTGGGGACCTGTCCTACGCTAACTGTGATCAGGCAG
ACTTTGGCATCCGTCCTGGCGCACGAATCCCCGATTGAGGTGGTCCTACA
CGCTGGGGACCTGTCCTACGCTAACTGTGATCAGATGCGTTGGGACACGT
TCATGACGATATTGGACCCGGCTGCGTCCCGAATACCCTGGATGGTCTCT
GCCGGAAATCACGAAATAGAGGACGGCTCGTCCGAAGGGGTTCCGTTCGT
AGCGTACGAGAGCCGCTTCACGATGCCTTCTATCGCGCCTGCGATCCAAA
ATATGAACTGCAGTGCCCAGGGCGGTGGGTTGGATGGCAACCAAACGGCT
TGCGGGGCGGGATTGGGCCAAGGGCTAGCTAAAATGGCTGCATTTATGGC
TGCCGATGATGGGTTACCGTTGACCGCCATTGCGCAGGCCGCACGGCACG
CGCGAGATGCCCAGGACCCATGGCGTCGACCTGTGATGACAGGGTGGCCT
ACATCTGATTTAGGAGAGGAAGAACCCGTGGTTCCGAATGAGGTGGATTG
CTGCCCGTCTGAGTGGTCGGGTACGTACGACTACGGAAATAGATGCGTTG
GGACACGTTCATGACGATATTGGACCCGGCTGCGTCCCGAATACCCTGGA
TGGTCTCTGCCGGAAATCACGAAATAGAGGACGGCTCGTCCGAAGGGGTT
CCGTTCGTAGCGTACGAGAGCCGCTTCACGATGCCTTCTATCGCGCCTGC
GATCCAAAATATGAACTGCAGTGCCCAGGGCGGTGGGTTGGATGGCAACC
AAACGGCTTGCGGGGCGGGATTGGGCCAAGGGCTAGCTAAAATGGCTGCA
TTTATGGCTGCCGATGATGGGTTACCGTTGACCGCCATTGCGCAGGCCGC
ACGGCACGCGCGAGATGCCCAGGACCCATGGCGTCGACCTGTGATGACAG
GGTGGCCTACATCTGATTTAGGAGAGGAAGAACCCGTGGTTCCGAATGAG
GTGGATTGCTGCCCGTCTGAGTGGTCGGGTACGTACGACTACGGAAATAG
TTTTTATAGCTTTGATGTGGCGTCGGTGCACGTGGTGGTCCTTAACCCCT
ACACGGCAACAGGGGAGGGCTCGATCCAACACGAGTGGCTGATTCAGTTT
TTATAGCTTTGATGTGGCGTCGGTGCACGTGGTGGTCCTTAACCCCTACA
CGGCAACAGGGGAGGGCTCGATCCAACACGAGTGGCTGATTCAGGATCTG
GCCGACGTGGATCGGGCGTTGACCCCGTGGATAATTGCCATGTTTCATTG
CCCGTGGCACAACTCCAATGTGGAGCACCAAGGGGAGAGACAGGCAGCAA
CGTCGATGCGTACGATGGAGCCTTTGCTGTTTGAATACAGAACAGCCTTG
GTTGTGTCCGGACACGTACATGGATCTGGCCGACGTGGATCGGGCGTTGA
CCCCGTGGATAATTGCCATGTTTCATTGCCCGTGGCACAACTCCAATGTG
GAGCACCAAGGGGAGAGACAGGCAGCAACGTCGATGCGTACGATGGAGCC
TTTGCTGTTTGAATACAGAACAGCCTTGGTTGTGTCCGGACACGTACATG
CGTACGAACGGTCTGTACCAGTCCTCAACCACGAGCCGTTGACTGGAGCT
CCGGTGTACGTGGTCGTGGGAGGCTCCGGCAACAGGGAAGATCATAACCC
GTACGAACGGTCTGTACCAGTCCTCAACCACGAGCCGTTGACTGGAGCTC
CGGTGTACGTGGTCGTGGGAGGCTCCGGCAACAGGGAAGATCATAACCCG
GACTATTTCAGACCTCCTGAGTGGAGCGCGTACCGAAACGGGAGTGCGTT
TGGACTGGGGACCCTGTCGGTGTTGAATTCAACCTCGGCACTATGGGAGT
GGAAGCGGACTATTTCAGACCTCCTGAGTGGAGCGCGTACCGAAACGGGA
GTGCGTTTGGACTGGGGACCCTGTCGGTGTTGAATTCAACCTCGGCACTA
TGGGAGTGGAAGTCGAACGACGTGGAGCCAATGGTGCACGATTCTACGTG
GATCGAGAATCCTTACTTCCTAGAGTGATCGAACGACGTGGAGCCAATGG
TGCACGATTCTACGTGGATCGAGAATCCTTACTTCCTAGAGTGA
back to top