mRNA_H-paniculata_contig6462.14289.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: D7FQ54_ECTSI (Calcium-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ54_ECTSI) HSP 1 Score: 197 bits (500), Expect = 2.370e-63 Identity = 101/108 (93.52%), Postives = 101/108 (93.52%), Query Frame = 1
Query: 1 MGNDMGRSANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYTITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEEKLA 324
MGNDMGRSANRMAIGAMANATHF KKELL LQ RKF ELAQREGNPYTITR EFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFV GLAPLCHG VEEKLA
Sbjct: 1 MGNDMGRSANRMAIGAMANATHFEKKELLRLQ-RKFVELAQREGNPYTITRAEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVGGLAPLCHGTVEEKLA 107
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: A0A7S2UWF2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWF2_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.860e-43 Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 1 MGNDMGRSANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYTITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEEKL 321
MGND G+ ANR+AI AMAN THF K+ELL+LQ RKF ELAQREGNP ITR EFRE+LE+VGI+ESD EILDRLF+M DKTG+DQI ++EFV GLAPL G+ +K+
Sbjct: 1 MGNDFGKGANRLAIAAMANVTHFEKRELLALQ-RKFMELAQREGNPTLITRGEFRESLEVVGIVESDAEILDRLFTMVDKTGDDQIPFREFVVGLAPLITGDAADKI 106
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: A0A7S3H521_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H521_9STRA) HSP 1 Score: 123 bits (308), Expect = 3.920e-33 Identity = 60/107 (56.07%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 1 MGNDMGRSANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYTITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEEKL 321
MGN +G+ ANRMAI AM+N TH K+EL +L KF E++ REGN I R EF EAL +VGI ++D +ILDRLF+M+DK+G+DQINY++F+ G+APL G +EK+
Sbjct: 1 MGNQVGKGANRMAIAAMSNVTHIEKRELAALLG-KFKEISGREGNSNMINRTEFGEALSIVGINQNDADILDRLFTMYDKSGDDQINYRDFIVGIAPLISGTHQEKI 106
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: A0A482SV94_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV94_9ARCH) HSP 1 Score: 122 bits (305), Expect = 1.110e-32 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 1 MGNDMGRSANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYTITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEEKL 321
MGN +G+ ANRMAI AM+N TH K+E+ +LQ KF E++ REG P I R +F EAL +VG+ ++D +ILDRLF+M+DK+G+DQI YK+F+ G+APL G EK+
Sbjct: 1 MGNQVGKGANRMAIAAMSNVTHLEKREIAALQN-KFREMSMREGTPNMINRTDFTEALAIVGVNQNDADILDRLFTMYDKSGDDQIIYKDFIVGIAPLISGTHVEKI 106
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: A0A7S2FTB5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FTB5_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.240e-32 Identity = 63/108 (58.33%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 1 MGNDMGRS-ANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYTITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEEKL 321
MGN++ S +NRMAI AMAN T K+ELL +Q R+F E+A R+GN +TIT+ EF EAL I+ESD+EILDRLF+M DKTG+ QIN++EF+ G++PL G VE+KL
Sbjct: 1 MGNNVSSSGSNRMAIAAMANVTSMEKRELLQMQ-REFHEIAMRQGNSHTITKDEFEEALSRCEIVESDSEILDRLFTMLDKTGDQQINFREFICGISPLITGTVEQKL 107
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: A0A7S0SRK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRK4_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.640e-31 Identity = 57/107 (53.27%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 1 MGNDMGRSANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYTITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEEKL 321
MGN +G+ NRMAI AM+N TH K+EL SLQ KF E+A R GNP I R EF E L +VGI +D++ILD+LF+M+DKTG+DQI +++++ G+APL G+ +K+
Sbjct: 1 MGNQIGKGTNRMAIAAMSNVTHIEKRELASLQN-KFKEIASRAGNPAIINRTEFTECLSIVGINPNDSDILDKLFTMYDKTGDDQILWRDYIVGIAPLISGSHIDKI 106
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: A0A6U0XRU6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XRU6_9STRA) HSP 1 Score: 109 bits (272), Expect = 9.890e-28 Identity = 54/107 (50.47%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 1 MGNDMGRSANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYTITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEEKL 321
MGN + +A AMAN THF K EL L+ + F +LA R+GNP TI+R E +EAL + GI+++D E+LDRLF+MFD+TG+DQ+ ++EF++G A L +V+EKL
Sbjct: 1 MGNSQTDGRSPLAFSAMANYTHFEKHELGMLRDQ-FVDLAHRDGNPATISRAEMQEALSVAGIVDTDKEVLDRLFTMFDRTGDDQVYFREFISGFAALITSDVKEKL 106
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: A0A7S1C8Q8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8Q8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.180e-23 Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 MGNDMGRSANRMAIGAMANATHFGKKELLSLQQRKFFELAQRE-GNPYTITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEEKL 321
MG N++AI AM++ HF + ELL+LQ ++F LA+ N TI R +F +AL +V + ESD E+LDRLF+MFD TG+ QIN+KEFV G++ + G +EEKL
Sbjct: 1 MGASHSAGTNKLAITAMSHVVHFTRDELLALQ-KEFLRLAKTNTDNENTINRKQFHDALHIVKVEESDKELLDRLFTMFDDTGDGQINFKEFVCGISTILRGTLEEKL 107
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: A0A7S3ZVE1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVE1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 9.100e-23 Identity = 49/106 (46.23%), Postives = 72/106 (67.92%), Query Frame = 1
Query: 1 MGNDMGRS-ANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYTITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEE 315
MGND+ ++ ANRMAIGAM+N T ++ ++ K ++A+REG+ +T+ EF EAL + I +SD +ILDR+F M D+TG D+IN+KEF+ G+ P G EE
Sbjct: 1 MGNDVAKNCANRMAIGAMSNVTDL-ERPVIQRMSEKLADIAKREGSKDLVTKEEFGEALNGLEITQSDRDILDRIFVMLDRTGEDRINHKEFIVGIVPFALGKTEE 105
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Match: A0A1V9YQM0_9STRA (EF-hand domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQM0_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.610e-19 Identity = 52/127 (40.94%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 1 MGNDMGRSANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYT-------------------ITRVEFREALELVGIMESDTEILDRLFSMFDKTGNDQINYKEFVAGLAPLCHGNVEEKLA 324
MG D+ + ANR++I A+++ T F + +LL L R FE +P T ITR +F L+ V ESD ILDRLF+M DKTG+D INY+EF+ G+APL GN+ K+A
Sbjct: 1 MGQDLSKQANRLSIAAVSHITQFDRDDLLEL--RTCFENTILAKSPKTKKPVPLSTYAAKKDRVEPNITRADFNAGLDHVNFFESDRAILDRLFTMLDKTGDDVINYQEFLVGVAPLVKGNLLSKIA 125 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6462.14289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6462.14289.1 >prot_H-paniculata_contig6462.14289.1 ID=prot_H-paniculata_contig6462.14289.1|Name=mRNA_H-paniculata_contig6462.14289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp MGNDMGRSANRMAIGAMANATHFGKKELLSLQQRKFFELAQREGNPYTITback to top mRNA from alignment at H-paniculata_contig6462:1982..7574+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6462.14289.1 ID=mRNA_H-paniculata_contig6462.14289.1|Name=mRNA_H-paniculata_contig6462.14289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5593bp|location=Sequence derived from alignment at H-paniculata_contig6462:1982..7574+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6462:1982..7574+ >mRNA_H-paniculata_contig6462.14289.1 ID=mRNA_H-paniculata_contig6462.14289.1|Name=mRNA_H-paniculata_contig6462.14289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig6462:1982..7574+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |