mRNA_H-paniculata_contig6400.14207.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: D8LD24_ECTSI (THO complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD24_ECTSI) HSP 1 Score: 711 bits (1836), Expect = 7.130e-233 Identity = 367/529 (69.38%), Postives = 431/529 (81.47%), Query Frame = 1
Query: 1 SYDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRKHCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEALLYEGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEFVCSSKAWIRTKCPSLVALVKTYKLEPRVAFHIWRPIINDNLIKHWFGKVGSISGKTTKKEIDDKVVTPADRFIKALEADITTL--IPDSEPLTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKARAKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKSGNEAIFKMEAGTKHGFNLRAAGEGSTEPK 1581
SYDNFI+M+AD +++VG +LGLDC+AYTM+QHLCQSNRS VSDSGL LERW+TNL+TFAGLL+RK+ + D K LLSW VR+L EGGEPAMAAGKVLREVLH+AGGVQVLDGWSITQAQVDGKGGGDVLRQENASFG+TVK IK+A+ +LQ+ +KAGAS+PLL+LPA Q +LLYEGGSLDDQM+GKPQPHLKVLGHR+DETHTT+LQA EFVCS KAWI++KCP++ L+ TY LEPRV FHIWRP+IN+NLIK WF K G+ KT +++ D+ + A RFI LEA IT L +P+ PLTSKL+++FWALSL DVY+PTK+YA VV+NM +AK RA SKLQ+ ++KAER+ Y D K + + LE EK Q AHVKRVKNKLREIK LF K H T AE++ AVLK LVAPR+GMGPEEAYFCSKFFNTLHAIEAP+FNSL+FY + LS TLLCKTQYEAA LGFFLKDLLENVKEWRK+ NEAI+KMEAGTKHGFNL A + E K
Sbjct: 1016 SYDNFISMVADSMKFVGKTLGLDCMAYTMVQHLCQSNRSFVSDSGLDLERWVTNLSTFAGLLHRKNPDADSKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGSTVKPIKRAKVILQEATEKAGASLPLLVLPALQAGSLLYEGGSLDDQMRGKPQPHLKVLGHRADETHTTLLQAMEFVCS-KAWIKSKCPAIKTLLTTYGLEPRVVFHIWRPVINENLIKCWFPKAGT---KTEREQRDEAI---AKRFIGELEASITELSIVPECSPLTSKLILIFWALSLPDVYIPTKKYAQVVTNMNEAKRRADSKLQQAEEEGVTMSKAERSRYMLDRKTSPAVAAKLETEKGSQSAHVKRVKNKLREIKASLFAAKDK--HETGAETIDAVLKHLVAPRMGMGPEEAYFCSKFFNTLHAIEAPNFNSLVFYSRSFEGLSSTLLCKTQYEAAGLGFFLKDLLENVKEWRKTKNEAIYKMEAGTKHGFNLGDASQSVVEGK 1535
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: A0A8D8TZK9_9HEMI (THO complex subunit 2 n=6 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8TZK9_9HEMI) HSP 1 Score: 170 bits (431), Expect = 2.090e-41 Identity = 140/519 (26.97%), Postives = 248/519 (47.78%), Query Frame = 1
Query: 4 YDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRK-HCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEALLYEGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEFVCSSKAW--IRTKCPSLVALVKTYKLEPRVAFHIWRPIINDNL-IKHWFGKVGSISGKTTKKEIDDKVVTPADRFIKALEADITTLIPDS--EPLTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKARAKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKSGNEAIFKMEAGTKHGF 1542
YDN I + D L+Y+ L D + Y +I+ L +++ G +L W+TN+A+F G +++K H D+ G L + L + + +L+E++ + G++V+D IT+ Q+ GG++LR E ASF +V+ K++ L++ + +V L +L A QK ++Y+ S Q HLK++G D+ T++Q F+ S+ ++ P + L++ Y + VAF I RP+ N + IK+ + + K K V + + + L P E + + LV FW+L+ D++VP + Y ++ + K ++ S + K+ K E+D + + ++ L EK +Q HV+RV +L + K F K K E++ L+ + PR +A FC+KF + LH ++ +F+SLL Y + ++ + T+ EA G FL LL+ + W S AI++ E GF
Sbjct: 586 YDNLILPVVDSLKYL-TPLAYDVLTYCIIETLTHADKDRFKHDGTSLSVWLTNMASFCGNIFKKYHVTLDLTGTLQYIGNQLKQHKSLDLC---LLKEIVQKMSGIEVVD--DITEDQLQAMSGGELLRNEAASF-TSVRNTKRSSAKLKEALCSDNLAVALCLLIAQQKNCVIYQETSR--------QSHLKLVGKLYDQCQDTLVQYGTFLGSTMTIDEYTSRLPPIQTLLEEYHINIDVAFFITRPMFNHAISIKYDALRKADPNSKKLPTVKQQKYVEAVKEVMGPVIKSVIPLHPAKVWEDIAPEFLVTFWSLTTYDLFVPVEAYTREINKL---KMQSLSTIDSKELPAVKIKK------ESD--KFNSLMEKLNDEKKKQQEHVERVMARLNQEKDIWFVSRSPKG--AKNETINQFLQLCIFPRCIFTSVDAVFCAKFVHLLHKLKTANFSSLLCYDRLFCDITYVVTLCTENEAHRYGRFLATLLDTIMHWHSS--PAIYEAECADHPGF 1074
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: T2M8K4_HYDVU (THO complex subunit 2 n=4 Tax=Hydra vulgaris TaxID=6087 RepID=T2M8K4_HYDVU) HSP 1 Score: 169 bits (429), Expect = 3.600e-41 Identity = 132/524 (25.19%), Postives = 253/524 (48.28%), Query Frame = 1
Query: 4 YDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRKHCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEALLYEGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEFVCSSKAW--IRTKCPSLVALVKTYKLEPRVAFHIWRPIINDNL------IKHWFGKVGSI-SGKTTKKEIDDKVVTPADRFIKALEADITTLIPDS--EPLTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKARAKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKSGNEAIFKMEAGTKHGF 1542
YDNFI + D L+Y+ + L D +A+ +I+ L ++ + S L W+ +L+ F G +++K+ T++ GLL + L + + VL+EV+ + GV+ D IT Q+D GG++++ E A F + ++ +K L+D + + ++PL IL A Q+ A++Y +++Q + HLK++G D+ ++Q F+ + + PSL +TY L P V+F + RP+ + +K + + S K ++E++ D + + A L + L+ L V FW++++ D+ P RY +S ++ A +V++ +++ + + E + RC ++ L++E Q+ H K ++ L K F TK E + L+ + PR +A +C+KF T+H ++AP+F++L+ + + +S + T+ EA+ G FL +LE V W + N+ +++ E GF
Sbjct: 580 YDNFIGPMVDALKYL-NPLAYDVLAFCIIEALANPDKQRMKQSDTNLSYWMQSLSQFCGAVFKKY-PTEITGLLQYIANQLKDENSLDLL---VLKEVVQKMSGVEAND--EITPQQLDALSGGELMKSEGAYF-SQIRNTRKPSLRLRDALMEGKLTIPLCILIAQQRNAVVY----VEEQQR-----HLKLIGKLYDQCQDNLIQFGGFLTIQLSTHDYQASLPSLDEFHETYGLTPDVSFFLTRPVYKFEIQEKMEILKQSISQRNDLTSQKLKQQELEKSFCETCDNIFRPVVASALPLQTNKIWGNLSPLLYVTFWSMTMYDLNAPKSRYDDEISKLETAIT--------EVDASKEITSSSKRRKEKE--RCQLLIDKLKEEFQTQLEHNKLIRIWLESKKDAWFPSKM-----TKGEMITQFLQLCIFPRCVFSAIDALYCAKFIQTIHTLQAPNFSTLICFDRTFSDVSYIVASLTENEASRYGRFLCAMLEMVSRWHQ--NKQLYEEECANVPGF 1069
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: A0A8J5IN07_9STRA (THO complex subunit 2 n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IN07_9STRA) HSP 1 Score: 169 bits (427), Expect = 7.280e-41 Identity = 141/521 (27.06%), Postives = 249/521 (47.79%), Query Frame = 1
Query: 1 SYDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRKHCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQE--NASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEALLYEGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEFVCS--SKAWIRTKCPSLVALVKTYKLEPRVAFHIWRPII--NDNLIKHWFGKVGSISGKTTKKE--------IDDKV--VTPADRFIKALEADITTLIPDSEP------LTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKARAKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKSG 1497
SYDN I + D ++V LG+D +++ ++ L + +S+ SD G + W+T+LA F+G YRK+ ++ GLL + ++ L + VL E+L + G L+ I+ +Q++ + GG L E + F ++A L+D + K ++PL IL + + Y + + PHLK+LG D T+ Q +F+ R PS+ ALV Y ++P +A + RP + +D +++ V + G T DDK + D +A T+ PDS+P LT ++ FW L L D+++P ++Y + + ++++ S +++ E+ E+T M+ L E+ +Q+AH KRV +L ++K + F K+ H T ++ +L+ V PR M PE+A F +KF LH P ++L + K + +S +LC T+ EA++ G F+K+ L + W ++G
Sbjct: 618 SYDNLIQPVVDSFKFV-TPLGMDVLSFVLVSELSRPQKSMKSD-GTHVSLWLTSLANFSGSFYRKYPNVELAGLLQYLIQRLQNWASVDLI---VLSELLTKMGSCLSLE--DISVSQLEAQAGGPHLWYEPTDPKF-----QNRRAIPRLRDALIKRDLALPLCILICQMRSRIEYH--------EDRELPHLKLLGRVFDTCQLTLSQLLQFLGGVVDPLVYRKMLPSIAALVHDYNVQPELAMSLCRPAMRSDDPVLQTAPRGVHATGGSNTASNGAASNGTSRDDKCWYMYNVDFLEDIRQALCTSNGPDSKPKDPFTGLTPEVYATFWGLKLYDIHIPFQQYESEILRLRNS---VTSGANASLSASERKKLKEKTTQ---------MIDVLTTEQKDQVAHRKRVYERLEKMKTKFF-KDEPNDHQT---AIDELLQKCVIPRSLMSPEDALFAAKFMERLHTFSTPQMSTLQYIHKVNMKVSAIVLCATEREASNFGIFMKETLGLILRWYQNG 1102
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: A0A7M5XKI0_9CNID (THO complex subunit 2 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XKI0_9CNID) HSP 1 Score: 168 bits (425), Expect = 1.160e-40 Identity = 136/525 (25.90%), Postives = 252/525 (48.00%), Query Frame = 1
Query: 4 YDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRKHCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEALLYEGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEFVCSSKAW--IRTKCPSLVALVKTYKLEPRVAFHIWRPIINDNLIKHWFGKVGSISGKTT-KKEIDDKVVTPADRFIKALEADITTLIPDS---------EPLTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKARAKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKSGNEAIFKMEAGTKHGF 1542
YDNFI + D L+Y+ + L D + + +I+ L ++ + S L W+ +L+ F G +++K+ TD+ GLL + L G + VL+EV+ + GV+ D IT Q++ GG++LR E A FG ++ +K L+D + + ++PL +L A Q+ A++Y +Q G HLK++G D+ ++Q F+ ++ P+L TY + P +++ + RP + + K+ +I + +KE +F +A + ++ S L+ L V FW+LS+ D+Y P+ RY + KA+ K + E ++ E + +++ + +++RC ++ LE+EK Q+ H K V + K F K E++ L+ V PR +A +C+KF T+H++ AP+F++L+ + + +S + T+ EA+ G FL +L+ V W K ++ +++ E GF
Sbjct: 570 YDNFIGPMVDSLKYL-NPLAYDVMTFCVIEALANPDKQRMKQSDTNLSPWLQSLSQFCGAVFKKY-PTDITGLLQYIANQLKAGKSLDLL---VLKEVVQKMSGVEAND--EITPQQLEALAGGELLRAEGAYFGQ-IRNTRKPSARLRDALIEGNLTIPLCLLIAQQRNAIVYV-----EQEAG----HLKLVGKLYDQCQDNLIQFGGFLSLQLGNHDYQSALPTLDEFHNTYGITPDISYFLKRPFYQRQIQE----KMSTIKQEMADQKESRRGTELMNSKFCEACDGIFRPVVEASINLQQSKIWNNLSPLLYVTFWSLSMYDLYTPSDRY-------DEEKAKLKKSINEIDDNKEFTSSSKK---KKEIERCKLLIEKLEEEKKAQLEHNKLVLTWMESRKDSWFPSKI-----AKGETITQFLQLCVFPRCVFSAVDAMYCAKFIQTVHSLAAPNFSTLICFDRTFSDVSYIVASLTENEASRYGRFLCAMLQMVMRWHK--DKKLYESECANCPGF 1056
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: A0A484EJI8_BRELC (THO complex subunit 2 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EJI8_BRELC) HSP 1 Score: 166 bits (421), Expect = 4.210e-40 Identity = 138/524 (26.34%), Postives = 244/524 (46.56%), Query Frame = 1
Query: 1 SYDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRKHCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEALLYEGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEFVCS--SKAWIRTKCPSLVALVKTYKLEPRVAFHIWRPII--NDNLIKHWFGKVGSISGKTTKKE---IDDKVVTPAD-----------RFI----KALEADITTLIPDSEP---LTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKARAKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKSG 1497
SYDN I + + ++V LG+D +++ ++ L + +S+ SD G + W+T+LA F+G YRK+ ++ GLL + ++ L + VL E+L + G L+ I+ +Q++ + GG L E A ++A L+D + K ++PL IL + + Y + K PHLK+LG D T Q +F+ R PS+ ALV Y +EP +A + RP + +D +++ + +I TT + + T A F+ KAL + ++ +P LT ++ FW L L D+++P ++Y + + ++++ S ++ E+ E+T M+ L E+ +Q+AH KRV +L +KG F ++ ++ +L+ V PR M PE+A F +KF LH P ++L + K + +S +LC T+ EA++ G F+K+ L V W ++G
Sbjct: 648 SYDNLIQPVVESFKFV-TPLGMDVLSFVLVSELSRPQKSMKSD-GTNVSLWLTSLANFSGSFYRKYPNVELAGLLQYLIQRLQNWASVDLI---VLSELLTKMGSCLSLE--DISVSQLEAQAGGPNLWYEPAD---PKFQNRRAIPRLRDALIKRNLALPLCILICQMRSRIEYH--------EDKRLPHLKLLGRVFDTCQLTFSQLLQFLSGVVHPLVYRKMLPSVAALVHDYNVEPELAMSLCRPAMRSDDPILQTAPRGIHAIGASTTASDEAACNGTTTTDASSGEICWYMYNTNFLNDIRKALRPESSSTSKFEDPFTGLTPEVYATFWGLKLYDIHIPFQQYESEILRLRNS---VSSGANATLSGSERKKLKEKTTQ---------MIDVLTTEQKDQVAHRKRVYERLESMKGRFFQDEPNENQT----AIDELLQKCVIPRSLMSPEDALFAAKFMERLHTFATPQMSTLQYIHKVNMKVSAIVLCATEREASNFGIFMKETLGMVLRWYQNG 1137
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: A0A8K1FI86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI86_PYTOL) HSP 1 Score: 166 bits (420), Expect = 5.510e-40 Identity = 135/511 (26.42%), Postives = 239/511 (46.77%), Query Frame = 1
Query: 1 SYDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRKHCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEALLYEGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEFVCS--SKAWIRTKCPSLVALVKTYKLEPRVAFHIWRPIIN--DNLIKHWFGKVGSISGKTTKKEIDDKVVTPADRFIKALEADITTLIPDS-------EPLTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKAR--AKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKS 1494
SYDN I + + +++ LG+D +++ ++ L +S +S+ SD G + W+++LA F+G YRK+ ++ GLL + + L + VL E+L + G + I+ +Q++ GG L E + T ++A L+D + K ++PL +L + + ++ S P HLK LG D T+ Q +F+ PS+ LV+ Y + P +A I RP I D + K + + +G D + + AL D+ + + E +T ++ V FW+L L D++VP +Y + +S +++A + A S+ ++S E+ E+T M+ L E+ +Q+AH KRV +L E K F K K +V +L+ + PR + PE+A FC+KF +H + P F+++ +Y + + L +LC T+ EA + G FLK+ + W +S
Sbjct: 597 SYDNLIQPVVESFKFI-TPLGMDVLSFVLVGELSKSRKSMKSD-GTNISLWLSSLANFSGSFYRKYPNVELTGLLQYLIHRLQSWESVDLV---VLSELLSKMGSCISFE--DISTSQLEALAGGPHLWHEPSDPKLT---NRRAIPRLRDALVKRDLALPLCLLICQVRSKMEFQEDS--------PLTHLKALGRMYDTCQMTLSQLLQFLNGVVDPTVYSKMLPSVQELVQEYHILPELAMTICRPGIRAADGVFKKVPRSIHATTGSNGTAAAADGSTPTWEMYSTALLEDLGRALEAANGGKDAFEGMTREMYVTFWSLILYDIHVPFPQYESEISRLRNAMSTGAAASQANGGMSSSERKKHKEKTTQ---------MIDKLLTEQKDQVAHRKRVYERLEEKKAAFFKGEALK----KQSAVTELLQQCIIPRALLSPEDALFCAKFMERIHHLNTPFFSTVQYYNRVALELPSIVLCVTEREAGNFGIFLKETFTLLHRWYQS 1076
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: A0A0W8DY15_PHYNI (THO complex subunit 2 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DY15_PHYNI) HSP 1 Score: 166 bits (419), Expect = 7.900e-40 Identity = 137/526 (26.05%), Postives = 245/526 (46.58%), Query Frame = 1
Query: 1 SYDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRKHCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQE--NASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEALLYEGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEFVCS--SKAWIRTKCPSLVALVKTYKLEPRVAFHIWRPII--NDNLIK------HWFGKVGSISGKTTKKEIDDKVVTPADRFIKALEADITTLI---------PDSEP------LTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKARAKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKSG 1497
SYDN I + D ++V LG+D +++ ++ L + +S+ SD G + W+T+LA F+G YRK+ ++ GLL + ++ L + VL E+L + G L+ I+ +Q++ + GG L E + F ++A L+D + K ++PL IL + + Y + + PHLK+LG D T+ Q +F+ R PS+ LV+ Y ++P +A + RP + +D +++ H G + S + ++ AD I PDS+P LT ++ FW L L D+++P ++Y + + ++++ S +++ E+ E+T M+ L E+ +Q+AH KRV +L +K + F K+ H T ++ +L+ V PR M PE+A F +KF LH P ++L + K + +S +LC T+ EA++ G F+K+ L + W ++G
Sbjct: 618 SYDNLIQPVVDSFKFV-TPLGMDVLSFVLVSELSRPQKSMKSD-GTHVSLWLTSLANFSGSFYRKYPNVELAGLLQYLIQRLQNWASVDLI---VLSELLTKMGSCLSLE--DISASQLEAQAGGPHLWYEPTDPKF-----QNRRAIPRLRDALIKRDLALPLCILICQMRSRIEYH--------EDRELPHLKLLGRVFDTCQLTLSQLLQFLGGVVDPLVYRKMLPSITTLVRDYNVQPELAMSLCRPAMRSDDPVLQTAPRGVHATGGSNTASNXXXXXXXXXXXTSSGEKCWYMYNADFLEDIRQALCTSDGPDSKPKDPFTGLTPEVYATFWGLKLYDIHIPFQQYESEILRLRNS---VTSGANASLSASERKKLKEKTTQ---------MIDVLTTEQKDQVAHRKRVYERLENMKSKFF-KDEPNDHQT---AIDELLQKCVIPRSLMSPEDALFAAKFMERLHTFSTPQMSTLQYIHKVNMKVSAIVLCATEREASNFGIFMKETLGLILRWYQNG 1107
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: A0A5D6XSN2_9STRA (THO complex subunit 2 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSN2_9STRA) HSP 1 Score: 166 bits (419), Expect = 8.000e-40 Identity = 146/531 (27.50%), Postives = 249/531 (46.89%), Query Frame = 1
Query: 1 SYDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRKHCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEAL-LYEGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEF---VCSSKAWIRTKCPSLVALVKTYKLEPRVAFHIWRPII--NDNLIK------HWFGKVGSISGKTTKKE---IDDKVVTPADRFIKA--LEADITTLIPDS----------------EPLTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKARAKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKS 1494
SYDN I + + ++V LG+D +++ ++ L +S +++ SD G + W+ +LA+FAG YRK+ ++ GLL + ++ L + VL E+L + G + I+ +Q++ + GG L E A ++A L+D + K ++PL +L + + +E + Q HLK+LG D T+ Q +F V +A+ + PSL ALV Y + P +A + RP I +D +++ H G G+ + + + F+ A L AD+ + + E +T L V FW+L L D++VP +Y A + +++A A + + E+ E+T M+ +L E+ +Q+AH KRV +L K LF + +VQ +L++ V PR + PE+A FC+KF LHAI P F++L +Y + L P +LC T+ EA +LG FLK+ + + W +S
Sbjct: 618 SYDNLIQPVVESFKFV-TPLGMDALSFVLVSELARSRQAMKSD-GTNVSLWLASLASFAGSFYRKYPTVELAGLLQYLIQRLQNWESVDLV---VLSELLSKMGSCISFE--DISLSQLEAQAGGPHLWHEPAD---PKLMNRRAIPRLRDALVKRDLALPLCLLICQMRSRIEFHESAAARTQ-------HLKLLGRVYDTCQMTLSQLLQFLNGVVDPRAYAQM-LPSLAALVHEYHVRPELAMTLCRPAIRFDDPVLRKAPRSIHAPGSAGTAGAAGPESGGLGPGEGAAARRNWFMNAPALLADVGEALRGASVGXXXXXXXDAPEPFEGMTKDLYVTFWSLILYDIHVPFPQYEAEILRLRNAMNAAANG---PLTGAERKKLKEKTAQ---------MIDTLTNEQKDQVAHRKRVFERLEATKAALFVARDGQAGGDSRSAVQELLQTCVVPRALLSPEDALFCAKFMARLHAINTPAFSTLQYYNLVNLKLPPLVLCVTEREAGNLGIFLKESVSLLLRWYQS 1118
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Match: A0A673X9V6_SALTR (THO complex subunit 2 n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673X9V6_SALTR) HSP 1 Score: 164 bits (416), Expect = 1.530e-39 Identity = 131/519 (25.24%), Postives = 249/519 (47.98%), Query Frame = 1
Query: 4 YDNFITMLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATFAGLLYRKHCETDVKGLLSWCVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGATVKAIKKAQKMLQDGMDKAGASVPLLILPAHQKEALLY-EGGSLDDQMKGKPQPHLKVLGHRSDETHTTMLQASEFVCSSKA---WIRTKCPSLVALVKTYKLEPRVAFHIWRPIINDNLIKHWFGKVGSISGKTTKKEIDDKVVTPADRFIKALEADITTLIPDS--EPLTSKLLVVFWALSLSDVYVPTKRYAAVVSNMQDAKARAKSKLQEDVNSVEKLNKAERTMYEADLKRCDPMVSSLEKEKAEQMAHVKRVKNKLREIKGELFDKNYKKHHPTKAESVQAVLKSLVAPRIGMGPEEAYFCSKFFNTLHAIEAPDFNSLLFYQKCLVCLSPTLLCKTQYEAASLGFFLKDLLENVKEWRKSGNEAIFKMEAGTKHGF 1542
YDN I + D L+Y+ SL D +AY +I+ L + + T+ W+ +LA+ G ++RK+ ++ GLL + L G + +L+EV+ + G+++ D +T Q++ GG+ L+ E FG ++ KK+ + L+D + ++PL +L A Q+ +++ EGG + HLK++G D+ H T++Q F+ S+ + +I+ + PS+ L + AF + RP+ ++ + + G ++++ K V + + + + +L P + L + FW+L++ D+ VP Y V KLQ V ++E+ + + +RC + L++E+ +Q+ HV+RV ++L+ L N+ TK E++ L+ + PR +A +C++F +H +AP+F +LL Y + + T+ T+ E+ G FL +LE V W + A+++ E G GF
Sbjct: 328 YDNLIGPVVDSLKYL-TSLNYDVMAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKY-PIELAGLLQYVTNTLKAGKSFDLL---ILKEVVQKMAGIEITD--EMTSEQMEAMTGGEQLKAEGGYFGQ-IRNTKKSSQRLKDALLDHELALPLCLLMAQQRNGVVFLEGG----------EKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIK-RVPSIDILCNQFHTPHDAAFFLSRPMYGHQILSKYDELKKAEKGNRQQQKVH-KYVAACELVMSPVHEAVVSLHPPRVWDDLRPQFYATFWSLTMYDLAVPHNAYDREVK-----------KLQVQVKAIEENPDVPMNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLK-----LEKDNWLLAKSTKNETITKFLQLCLFPRCIFSAIDAVYCARFVELVHQQKAPNFCTLLCYDRVFSDIIYTVASCTENESRRYGRFLCCMLETVTRWHS--DRAVYEKECGNYPGF 808 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6400.14207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6400.14207.1 >prot_H-paniculata_contig6400.14207.1 ID=prot_H-paniculata_contig6400.14207.1|Name=mRNA_H-paniculata_contig6400.14207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=528bp MLADGLRYVGDSLGLDCVAYTMIQHLCQSNRSIVSDSGLTLERWITNLATback to top mRNA from alignment at H-paniculata_contig6400:2312..12226- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6400.14207.1 ID=mRNA_H-paniculata_contig6400.14207.1|Name=mRNA_H-paniculata_contig6400.14207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9915bp|location=Sequence derived from alignment at H-paniculata_contig6400:2312..12226- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6400:2312..12226- >mRNA_H-paniculata_contig6400.14207.1 ID=mRNA_H-paniculata_contig6400.14207.1|Name=mRNA_H-paniculata_contig6400.14207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3168bp|location=Sequence derived from alignment at H-paniculata_contig6400:2312..12226- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |