mRNA_H-paniculata_contig63909.14197.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: A0A6H5KCI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI7_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.350e-12 Identity = 33/55 (60.00%), Postives = 46/55 (83.64%), Query Frame = 1
Query: 7 AVRQIVEAAGQRPQDFALHSLRVGEATSLAAGGDNMSETVLKREGRWRSDTVRRY 171
A+R+IVE +G+ P+DFALHSLR+G A++LAAGG +SE V++REGRW+SD + Y
Sbjct: 371 ALREIVERSGRNPKDFALHSLRIGGASTLAAGGA-VSERVIQREGRWKSDAYKVY 424
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: A0A6H5K297_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K297_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 5.770e-10 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 1 TDAVRQIVEAAGQRPQDFALHSLRVGEATSLAAGGDNMSETVLKREGRWRSDT 159
T A+RQ+V AG +P+++ALHSLR+G AT LAAGG S VL+REGRW ++
Sbjct: 36 TVALRQVVALAGLQPEEYALHSLRIGGATFLAAGG--ASPEVLRREGRWSGES 86
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: A0A6H5KE53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE53_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 9.570e-9 Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 1 TDAVRQIVEAAGQRPQDFALHSLRVGEATSLAAGGDNMSETVLKREGRWRSDT 159
T A+RQ+V AG +P+++ALHSLR+G AT LAA G S VL+REGRW ++
Sbjct: 38 TVALRQVVALAGLQPEEYALHSLRIGGATFLAAEG--ASPEVLRREGRWSGES 88
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: A0A6H5KTP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP7_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 5.320e-8 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 7 AVRQIVEAAGQRPQDFALHSLRVGEATSLAAGGDNMSETVLKREGRWR--SDTVRRYCR 177
A+RQIV+ AG P+ LHSLR+G AT+LAAGGD + + +++ EGRW+ S T + Y R
Sbjct: 834 ALRQIVDKAGGDPKQVGLHSLRIGAATTLAAGGD-VPDRIIQSEGRWKEASGTFKIYTR 891
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: G5A872_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A872_PHYSP) HSP 1 Score: 53.9 bits (128), Expect = 5.560e-8 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 4 DAVRQIVEAAGQ---RPQDFALHSLRVGEATSLA-AGGDNMSETVLKREGRWRSDTVRRYCRVTRKI 192
D VR I AAG+ PQD+A HSLR G AT+L AG D+++ +K GRW+SD V RY R++ ++
Sbjct: 1 DVVRAIKPAAGRAGHNPQDYASHSLRSGSATALFNAGFDSLA---VKLFGRWKSDAVERYTRISGQL 64
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: A0A6H5K718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K718_9PHAE) HSP 1 Score: 55.1 bits (131), Expect = 3.050e-7 Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 16 QIVEAAGQRPQDFALHSLRVGEATSLAAGGDNMSETVLKREGRWR--SDTVRRYCR 177
QIVE AG P+ LHSLR+G AT+LAAGGD + + +++ EGRW+ S T + Y R
Sbjct: 218 QIVEKAGGNPKQVGLHSLRIGAATTLAAGGD-VPDRIIQGEGRWKEGSGTFKIYTR 272
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: G4ZHH4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZHH4_PHYSP) HSP 1 Score: 53.9 bits (128), Expect = 8.020e-7 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 TDAVRQIVEAAGQ---RPQDFALHSLRVGEATSL-AAGGDNMSETVLKREGRWRSDTVRRYCRVTRKI 192
+D VR I AAG+ PQD+A HSLR G AT+L AG D+++ +K GRW+SD V RY R++ ++
Sbjct: 221 SDVVRAIKAAAGRAGHNPQDYASHSLRSGGATALFIAGFDSLA---VKLFGRWKSDAVERYTRISGQL 285
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: G4ZEH1_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZEH1_PHYSP) HSP 1 Score: 53.5 bits (127), Expect = 1.180e-6 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 TDAVRQIVEAAGQ---RPQDFALHSLRVGEATSLA-AGGDNMSETVLKREGRWRSDTVRRYCRVTRKI 192
+D VR I AAG+ PQD+A HSLR G AT+L AG D+++ +K GRW+SD V RY R++ ++
Sbjct: 264 SDVVRAIKAAAGRAGHNPQDYASHSLRSGGATALFNAGFDSLA---VKLFGRWKSDAVERYTRISGQL 328
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: G5A4S5_PHYSP (Uncharacterized protein (Fragment) n=3 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4S5_PHYSP) HSP 1 Score: 47.8 bits (112), Expect = 1.350e-5 Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 1
Query: 7 AVRQIVEAAGQRPQDFALHSLRVGEATSLA-AGGDNMSETVLKREGRWRSDTVRRYCRVTRKI 192
A++ E G P + HSLR G A++L AG D++ V+K GRWRSD V RY R++ ++
Sbjct: 5 ALKHAAELIGHEPDSYGSHSLRSGGASALFNAGYDSL---VIKLFGRWRSDAVERYTRMSSQL 64
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Match: W2KYM1_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KYM1_PHYPR) HSP 1 Score: 49.7 bits (117), Expect = 2.600e-5 Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 7 AVRQIVEAAGQRPQDFALHSLRVGEATSLAAGG-DNMSETVLKREGRWRSDTVRRYCRVTRKI 192
A+++I AG P+ +A HS+R+G AT+L AGG D +S +L GRW SD Y R + K+
Sbjct: 223 ALKRIAVRAGVSPRAYATHSIRIGGATALVAGGADRLSIKLL---GRWASDCFEEYPRQSAKV 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig63909.14197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig63909.14197.1 >prot_H-paniculata_contig63909.14197.1 ID=prot_H-paniculata_contig63909.14197.1|Name=mRNA_H-paniculata_contig63909.14197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp TDAVRQIVEAAGQRPQDFALHSLRVGEATSLAAGGDNMSETVLKREGRWRback to top mRNA from alignment at H-paniculata_contig63909:148..345+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig63909.14197.1 ID=mRNA_H-paniculata_contig63909.14197.1|Name=mRNA_H-paniculata_contig63909.14197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=198bp|location=Sequence derived from alignment at H-paniculata_contig63909:148..345+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig63909:148..345+ >mRNA_H-paniculata_contig63909.14197.1 ID=mRNA_H-paniculata_contig63909.14197.1|Name=mRNA_H-paniculata_contig63909.14197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at H-paniculata_contig63909:148..345+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |