mRNA_H-paniculata_contig6386.14192.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: D7G8K1_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K1_ECTSI) HSP 1 Score: 348 bits (894), Expect = 2.700e-112 Identity = 178/288 (61.81%), Postives = 211/288 (73.26%), Query Frame = 1
Query: 1 EAFLAWLQRNGAQFDGVEWPCT-TDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLSVFKNDNGLTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPTEQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVF-------NRYLKGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEVELSCTLS---EREPSADRRREVLSASGQFSSR 831
+ FL WL+ +GA D VEWP + T+SG RGAVARRDIA G+HMVIIP LMMSE HAK DP+ GHVHR N + +DNGL LY+MQE+LK ++SFYWPYL +LP P NLR+W+ ++L LQD +LVRR AR R L ALYR T+ L SSYP L+ ++YTFELFDFAW TIQARAFG+RL +ALVP ADCLNHGNVQTKYDFDV NG F NRY + SEVLNSYGRR ND LLL+YGFAM NEWD E+ C+L ++ P RR+ L ASGQ + R
Sbjct: 21 QEFLRWLRSHGAAIDCVEWPSSETESGVRGAVARRDIAPGDHMVIIPHALMMSEFHAKADPKYGHVHRLNTRLLGSDNGLALYIMQEILKEERSFYWPYLRMLPTPCNLRNWNRESLLLLQDHKLVRRTAARSRQLLALYRETIEFLSSSYPELYTADRYTFELFDFAWRTIQARAFGKRLKSSALVPFADCLNHGNVQTKYDFDVGGNGTFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNEWDAAEVICSLPPSHDQSPLDRRRKACLRASGQHTVR 308
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: A0A6H5JC99_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC99_9PHAE) HSP 1 Score: 335 bits (860), Expect = 6.300e-107 Identity = 181/316 (57.28%), Postives = 213/316 (67.41%), Query Frame = 1
Query: 1 EAFLAWLQRNGAQFDGVEWPCT-TDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLSVFKNDNGLTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPT----------------------------EQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVF-------NRYLKGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEVELSCTL--SEREPSADRRREV-LSASGQFSSR 831
+ FL WL+ +GA D VEWP + T+SG RGAVARRDIA G+HMVIIP LMMSE HAK DP+ GHVHR N + +DNGL LY+MQE+LK ++SFYWPYL +LP P NLR+W+ ++L LQD +LVRR AR R L ALYR T+ L SSYP L+ ++YTFELFDFAW TIQARAFG+RL +ALVP ADCLNHGNVQTKYDFDVE NG F NRY + SEVLNSYGRR ND LLL+YGFAM NEWD E++C L S + DRRR+ L ASGQ + R
Sbjct: 21 QEFLRWLRSHGAVIDCVEWPSSETESGVRGAVARRDIAPGDHMVIIPHALMMSEFHAKADPKYGHVHRLNTRLLGSDNGLALYIMQEILKEERSFYWPYLRMLPTPCNLRNWNRESLLLLQDHKLVRRTAARGRQLLALYRETIEFLSSSYPDLYTVSRRFDFWHPESRLLRLRVWCIYPCAPCADRYTFELFDFAWTTIQARAFGKRLKSSALVPFADCLNHGNVQTKYDFDVERNGTFRLFPSGNNRYPRNSEVLNSYGRRANDNLLLDYGFAMLDNEWDTAEVTCFLPPSHGQSPLDRRRKACLLASGQHTVR 336
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: A0A225UML7_9STRA (SET domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UML7_9STRA) HSP 1 Score: 266 bits (679), Expect = 3.210e-84 Identity = 137/273 (50.18%), Postives = 172/273 (63.00%), Query Frame = 1
Query: 1 EAFLAWLQRNGAQFDGVEWPCTTDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLSVFKNDNG-LTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPTEQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVFNRY-------LKGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEVELSCTLSEREPSADRRR 795
+ FL WL+ NGA F ++WP TT +G RGAVA DIAT E M+ +PR L++SE DP+L V+R N VF D+ LTL++M+E++ G++SF+ PYL+ILP P +++ W+ L EL D RLV R + Y M L YPG FP YT + F FAW TIQAR FGRRL TALVP ADCLNH NV TKYDFDV+ENG+F Y KG EV NSYGRR N LLL+YGFA+P NEWD V++ + P + R
Sbjct: 13 QRFLQWLRDNGATFPKLQWPTTTPNGLRGAVALEDIATDEPMICVPRSLLISEHLCWQDPQLQCVYRDNRDVFTRDDPVLTLFIMRELVLGERSFFHPYLSILPYPESVQDWNVDELRELHDDRLVAAAARRSSEINVYYDRVMTRLQQKYPGEFPETLYTLDKFRFAWKTIQARTFGRRLPWTALVPFADCLNHSNVATKYDFDVDENGMFRLYPSSSTCFAKGEEVFNSYGRRANFQLLLDYGFALPDNEWDYVDVEISKDRAGPRGKKLR 285
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: A0A8K1FF70_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF70_PYTOL) HSP 1 Score: 261 bits (668), Expect = 4.910e-82 Identity = 133/259 (51.35%), Postives = 169/259 (65.25%), Query Frame = 1
Query: 1 EAFLAWLQRNGAQFDGVEWPCTTDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLSVFKNDNG-LTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPTEQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVF-------NRYLKGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEVELS 753
E F+ WL NGA F +EWP T++G RGA+AR +I E M+ IP++LM+SE DP+L V+ N VF D+ + L++++E LKG++SFY PYL ILP+ N++ W + LEEL+D L R +Q Y M +LD YPG FP QYTF+ F FAW +IQAR FGRRL T+LVP ADCLNH NV TKYDFDV+ NG F N Y KG+EV NSYGRR N LLL+YGFA+ NEW+ VE+S
Sbjct: 7 ERFVQWLLDNGASFPKLEWPVLTENGLRGAIAREEIHPNEAMLTIPQRLMISEATCWADPQLRRVYEENRDVFARDDPVIALFLVREKLKGEESFYHPYLAILPEVINVQDWSKEELEELRDSSLAEAAARRSTEVQTFYDGIMELLDEKYPGEFPRNQYTFDRFRFAWKSIQARTFGRRLPWTSLVPFADCLNHSNVATKYDFDVDGNGSFRLFPSASNSYAKGAEVFNSYGRRPNFQLLLDYGFALEDNEWEYVEVS 265
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: W2Z914_PHYPR (SET domain-containing protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2Z914_PHYPR) HSP 1 Score: 259 bits (663), Expect = 1.220e-81 Identity = 134/271 (49.45%), Postives = 169/271 (62.36%), Query Frame = 1
Query: 7 FLAWLQRNGAQFDGVEWPCTTDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLSVFKNDNG-LTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPTEQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVFNRY-------LKGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEVELSCTLSEREPSADRRR 795
FL WL+ NGA F +EWP TT +G RGAVA I TGE M+ IPR+L++SE DP+LG V R N VF D+ + L++++E+L + SF+ PYL+ILP P +++ W L EL D RLV R + YR + L YPG FP YTF+ F FAW TIQAR FGRRL TALVP ADCLNH NV TKYDFDV +NG+F Y +KG+EV NSYGRR+N L+L+YGFA+ NEWD V++ P + R
Sbjct: 8 FLQWLRDNGATFPKLEWPVTTPNGLRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMALFIVRELLLKESSFFHPYLSILPYPESVQDWTHDELHELYDERLVDAAARRSSEVSIYYRRVLTRLQEKYPGEFPETLYTFDKFKFAWKTIQARTFGRRLPWTALVPFADCLNHNNVSTKYDFDVNDNGLFRLYPSAATSFVKGAEVFNSYGRRSNFQLMLDYGFALTDNEWDYVDVEIDKDRAGPRGKKLR 278
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: W2Q7U8_PHYPN (SET domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q7U8_PHYPN) HSP 1 Score: 259 bits (663), Expect = 3.490e-81 Identity = 134/271 (49.45%), Postives = 169/271 (62.36%), Query Frame = 1
Query: 7 FLAWLQRNGAQFDGVEWPCTTDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLSVFKNDNG-LTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPTEQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVFNRY-------LKGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEVELSCTLSEREPSADRRR 795
FL WL+ NGA F +EWP TT +G RGAVA I TGE M+ IPR+L++SE DP+LG V R N VF D+ + L++++E+L + SF+ PYL+ILP P +++ W L EL D RLV R + YR + L YPG FP YTF+ F FAW TIQAR FGRRL TALVP ADCLNH NV TKYDFDV +NG+F Y +KG+EV NSYGRR+N L+L+YGFA+ NEWD V++ P + R
Sbjct: 8 FLQWLRDNGATFPKLEWPVTTPNGLRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMVLFIVRELLLKESSFFHPYLSILPYPESVQDWTHDELHELYDERLVDAAARRSSEVSIYYRRVLTRLQEKYPGEFPETLYTFDKFKFAWKTIQARTFGRRLPWTALVPFADCLNHNNVSTKYDFDVNDNGLFRLYPSAATSFVKGAEVFNSYGRRSNFQLMLDYGFALTDNEWDYVDVEIDKDRAGPRGKKLR 278
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: G4ZIF2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZIF2_PHYSP) HSP 1 Score: 256 bits (653), Expect = 1.320e-79 Identity = 130/258 (50.39%), Postives = 168/258 (65.12%), Query Frame = 1
Query: 1 EAFLAWLQRNGAQFDGVEWPCTTDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLSVFKNDNG-LTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPTEQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVFNRY-------LKGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEVEL 750
+ FL WL+ NGA F ++WP T+ +G RG VA +A+GE M+ IPR+L++SE DP+LG V + N VF D+ L L++++E+L D+SF+ PYL +LP P +++ W L EL D RLV R + YR M L + YPG FP YTF+ F FAW TIQAR FGRRL TALVP ADCLNH NV TKYDFDV +NG+F Y +G+EV NSYGRR+N LLL+YGFA+P NEWD V++
Sbjct: 12 QRFLQWLRDNGATFPKLQWPVTSPNGLRGTVAAAAVASGEPMLCIPRRLLISEDLCWRDPQLGRVFQDNRDVFTRDDPVLALFLVRELLLADRSFFHPYLAVLPYPESVQDWTQAELGELHDERLVDAAARRTSEIDVYYRRVMVRLQTKYPGEFPEALYTFDRFKFAWKTIQARTFGRRLPWTALVPFADCLNHTNVATKYDFDVNDNGLFRLYPSGATSFAQGAEVFNSYGRRSNFQLLLDYGFALPDNEWDYVDV 269
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: A0A6A3EG31_9STRA (SET domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EG31_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.620e-79 Identity = 134/258 (51.94%), Postives = 166/258 (64.34%), Query Frame = 1
Query: 1 EAFLAWLQRNGAQFDGVEWPCTTDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLSVFKNDNG-LTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPTEQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVFNRY-------LKGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEVEL 750
+ FL WLQ NGA F ++WP TT SG RGAVA IATGE M+ IPR+L++SE DP+L V + N VF D+ L+L++++E L G +SF+ PYL +LP P +++ W L EL D RLV R + YR M L S YPG FP YTF+ F FAW TIQAR FGRRL TALVP ADCLNH NV T+YD DV++NG+F Y KG+EV NSYGRR N LLL+YGFA+ NEWD V++
Sbjct: 7 QRFLQWLQDNGATFPKLQWPTTTPSGLRGAVATSAIATGEPMLCIPRRLLISEDLCWRDPQLRCVFQDNRDVFTRDDPVLSLFLVREQLLGARSFFQPYLAVLPYPESVQDWTQDELRELHDGRLVDAAARRSSEIDVYYRRVMNRLQSKYPGEFPEALYTFDRFKFAWKTIQARTFGRRLPWTALVPFADCLNHTNVATRYDLDVDDNGLFRLYPSASTSFAKGAEVFNSYGRRANFQLLLDYGFALFDNEWDYVDV 264
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: A0A836CPE3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE3_9STRA) HSP 1 Score: 249 bits (636), Expect = 3.880e-79 Identity = 134/259 (51.74%), Postives = 161/259 (62.16%), Query Frame = 1
Query: 7 FLAWLQRNGAQFDGVEWPC-TTDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLS-VFKNDNGLTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPTEQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVFNRYL-----------KGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEV 744
FL WL+ NGA +D +EWP T SG+RGA+A DIA GE + +P + M++ A+ P +G V A + + D L LYVM E+L+GD SFY PYL +LP P WD + LQD RL AR R L + TM L +SYPG+FP E YT L+ AWG I+ARAFGRRL +ALVPLADCLNHGNV TKYDFD NGVF + +G E LNSYGRR+N LLLEYGFAM NEWDEV
Sbjct: 2 FLQWLRENGATWDKLEWPSYATASGSRGAIATADIAPGEPFLCVPERCMLTPPQAQRLPCVGPVFAAEAEGLLRGDAALALYVMHELLRGDASFYAPYLAVLPAPHTAEDWDATAVAVLQDERLAASADARSRQLTRAWERTMSALAASYPGMFPRETYTLALWRRAWGVIRARAFGRRLPWSALVPLADCLNHGNVPTKYDFDAGGNGVFRLWPSGGGSASVAVPRGCEALNSYGRRSNAHLLLEYGFAMLDNEWDEV 260
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Match: A0A833WJK7_PHYIN (SET domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WJK7_PHYIN) HSP 1 Score: 251 bits (640), Expect = 5.180e-78 Identity = 132/256 (51.56%), Postives = 161/256 (62.89%), Query Frame = 1
Query: 7 FLAWLQRNGAQFDGVEWPCTTDSGTRGAVARRDIATGEHMVIIPRQLMMSEVHAKNDPELGHVHRANLSVFKNDNG-LTLYVMQEMLKGDQSFYWPYLNILPKPRNLRHWDDKNLEELQDPRLVRRNGARKRHLQALYRHTMGILDSSYPGLFPTEQYTFELFDFAWGTIQARAFGRRLSCTALVPLADCLNHGNVQTKYDFDVEENGVFNRY-------LKGSEVLNSYGRRTNDTLLLEYGFAMPYNEWDEVEL 750
FL WLQ NGA F ++WP T +G RGAVA DIAT E M+ IPR L++SE DP+LG V R+N VF D+ + L++++E+L +SF+ PYL ILP P +++ W L EL D RLV R + YR M L Y G FP YTF+ F FAW TIQAR FGRRL TALVPLADCLNH V TKYDFDV +G+F Y K SEV NSYGRR+N LLL+YGFA+ NEWD V++
Sbjct: 9 FLQWLQDNGATFPKLQWPVATPNGLRGAVATEDIATNEPMLSIPRHLLISEEMCWQDPQLGPVFRSNRDVFTRDDPVMALFIVRELLLEQRSFFHPYLAILPSPESVQDWTHDELRELHDERLVGAAVRRSSEINIYYRRVMTRLQEKYAGEFPETLYTFDKFKFAWKTIQARTFGRRLPWTALVPLADCLNHNTVATKYDFDVNGSGLFRLYPSATTSFAKDSEVFNSYGRRSNFQLLLDYGFALTDNEWDYVDV 264 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6386.14192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6386.14192.1 >prot_H-paniculata_contig6386.14192.1 ID=prot_H-paniculata_contig6386.14192.1|Name=mRNA_H-paniculata_contig6386.14192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp EAFLAWLQRNGAQFDGVEWPCTTDSGTRGAVARRDIATGEHMVIIPRQLMback to top mRNA from alignment at H-paniculata_contig6386:1474..4643- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6386.14192.1 ID=mRNA_H-paniculata_contig6386.14192.1|Name=mRNA_H-paniculata_contig6386.14192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3170bp|location=Sequence derived from alignment at H-paniculata_contig6386:1474..4643- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6386:1474..4643- >mRNA_H-paniculata_contig6386.14192.1 ID=mRNA_H-paniculata_contig6386.14192.1|Name=mRNA_H-paniculata_contig6386.14192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at H-paniculata_contig6386:1474..4643- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |