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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-01_011250.1 |
| Exons | 3 |
| Model size | 1303 |
| Cds size | 549 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig638.14184.1 >prot_H-paniculata_contig638.14184.1 ID=prot_H-paniculata_contig638.14184.1|Name=mRNA_H-paniculata_contig638.14184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=183bp
MLRSSWLLLLFYGVAESFVGPTLLSGRANTVYTRRWGARIDCVRGRQLAF
LAPQRSAKGLVHAPTMSLSLRNVGLIIAEGGGEANVDLPISSDAQEAVVS
TLSVASSVLLFVIIAGSVYITFNEWRTNQATEKADKFIKNTGELPPSDLP
AKAPNGDSEEDDDAGNRRYRRMAKREKQRGRL* back to topmRNA from alignment at H-paniculata_contig638:8433..15191- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig638.14184.1 ID=mRNA_H-paniculata_contig638.14184.1|Name=mRNA_H-paniculata_contig638.14184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6759bp|location=Sequence derived from alignment at H-paniculata_contig638:8433..15191- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGCACAAGAAGGCGACCCCTCCTTTACTTGGACGGCAGGCAGCATGCT
GCGGTCATCTTGGCTCCTTCTCCTCTTCTATGGCGTGGCAGAGTCCTTCG
TTGGCCCTACATTGCTCTCGGGACGCGCAAATACAGTCTGTAAGTAATGC
ATCATATTGTGTACACATGCTACTTCAGCATGTTTCCGGCCCTGCACATC
CAAGTAAGCTCAGACAGCACCACACCCAGCACTCCTGATATGTATAAATA
CAGCCAGATGTATGCATGTAGCGCAGATGTTACACATACACCCCCACTGT
GCCATTAGTCTGGCTTATTTATGGGGAACTACCTGAACTTTTGAAGGGGT
GGAGGCGTTACTGGAAACTGCAACTGCAGTACATCATTCGAAACGCACAA
GCTCAGATTGCAGATTGATATCCCTAAAATATTTGTATGTTTTCTCTTAT
GAACATTCAGTGTCAGTGTCCTCTGTTGCAAACGCCCTGCAGAAGAGATA
ATGGCAGCACCTTAAACTTACAAAGGCAATTGAATCTTCTTGACAAAGTA
AACACTCAACGCTGGTGCACACCACGGTGTGAGCATGTGAGTCTGTGCTA
TTTAGCCCATTCTGTGTGCAACATAGTGTCGAGTGACTTGTTGACAGCAT
CCTCTACTGTCAGATGGGAATCGTTTTCGTTTTCGCGATCGGTCCCTTCT
AGGACGCCCTCCCAAAATCCTGAGGCCCCTTATTTCACTCAGGCCGCTTG
TTATATTCATGGGAAAACCCCTGAGAATAATTTAGACAGTCAACTCTTTC
CTGAGAATTTTTCGACGAAAACAGTTCTCCAAACCGTTTGTTATAGGTGG
GGAGTTTTGCGGGGGATTTGTACACCCATGGACAGGCCTGACAATGCACG
TATGTCTTTCTGGCCTGCGCGATAGTTGTCATCGTTTGCATTAGTTTTGA
AAACAGGATCCACGCTCGCAGTGTGCCCTTTGGTTCCCACCCACCCACAC
ACACACACCTACACCCACAATAGCAGCAGCAGCAGCAGCAGCAACAACAA
CAACTACTGTAATTGTGCCCTCCCGTTCGGTCACTCACACACGCCCACAC
TCACGACAGCAGTAGCAGCAACAACTTCTGTAAGTGTGCCCTCCTGTTCA
GTCACTCATACACACCCACACCCACAACAGCAATAGCAGCAACAACTTCT
GTAATTGTGCCCTCCCATTCAGTCGCTCACACACACCCACATCAACAACA
GCAGCAGCAGCAGCAGCAGCTACCGTATATGACCCTAGGCTTAATATCCA
CGAACATCCCATTCACTTCCCAACCATCCCCCGCTGTCTCCTCTTCCGCC
TGCATATCATCTATGCACGCGTTTGCTGCTAGCTTTGCCACATGAATTCG
GTCGAGCATGGCTTGCCCCGCTGTATCCACATCACCTACATTCAGATCGT
CTATATCCATCATACCCACAGCAGGTTCAGTGTGTATTGCGAAGGCATCT
GTGATGAAACACCTTTTCCTGCGAGCTTTGATCTCACATGAAACTGTCTA
AAAAATCACGTGAGATGAGGGGAAAGGCACCTCGATGGAAAAAGACCCCC
ATCTCTGAGCTTTTCCCCGGAAAATGGCCCTATACCAACCCCGTTCAGGA
AATTTCACAGAAAAAAGTGTCCGAATTATTTTCAGAGAAGCTTTTTGATG
ACTGTAACAAGCGGCCTCATATAGGAATATTCCCTGTGGCAGTAGAAAAC
GGCCCGTTTTTCGTTTTTCCCGTTGTTCTCAAATAGAAGAACAACCTTCG
CCCCCCAGGGTGTTCTCTTAGACCCATACGTAAGTTTTCGGAATTGACAA
AACCAAAACCAGGGTCTTCACGGTATTTTCCCTATGCAACTACCGTCCGA
CGTGTAGCAGCAGATCCTCCGAGAAGAATAGTATTCCTAAAGTCCCGCGA
GGTTCGGGGGGAAATCTTCACTTGCTTTCTCCAAAGTTGACGTTGTACTG
TGTCATGATCATTTTCCGCGGTGAATACCACGATGAACCCAAAATTCCCG
AAAAAAACATTACCGTGGTAATCTAGCTGACCACCACATAGCACCACGTG
GACTTTGAGCAAAAACAATCGTTTATGTGTATACTTTCTCCCCCACATTG
TGACTTTCTCGTGGTGCTCTTGACTTTGGATCTTTCTCGAGGGATCTTCT
GTTATACGCGGTTACCGTGGGACCTAATTTGCATGGTAAAAATAATGGAG
ACCCCTGGAAAAAATGCACAATCTGCCATAATTAGCAGAAATAATCGATT
CAATTTTCGATGATAATATCGCAAGGAGATTTTACATTAAGAAATGACTT
GTCCCGCTGGATTCCCCCGCCAAATTTTCACTGACAGCAATTTTGATCCC
CTTTCTCACGTCAAACCTCCAACCGAATGCTGCTCGAAACATGTGTGGAT
CCTAATTTTGACATGCACGTATCGGCGAATTGCCAAAGTGTAGAGGTGAC
GGCAGCCGAGTAATGATTACGCCGCGACATGTTACTATGACCTTGGATGA
GAGAAAATGACGTGCTGCGTTAGATTCCTTGGCAACTCAATCCGTGTGGC
GCTCCGGAGGTAATATCCATCTAATGGTGAAGACGTCGAGCTGAAGCGCC
AGGTGAAGCAGAAAAACGCAAGGTTGGAGCCCACGACAAAACTGGGACCC
GACGTGTGTCAAACGGCGTTTGGTTCGTGGTATGACGCGGTGACAGGCGA
TGGGGCCTGCTCTCAGTCCTTCAATTTACTGGGGCATCCAAATCAACGAA
CCGTTTTTTCATCGGAGGTCTCGCTGCGACGTCTACTACCGAAAGTCCAG
CATTTGCCCACGGGATCATTTTGGCCCCCTTGTCTTTTTTAGTATAAACG
GGTTTTATCTACCTTTGACCACACTTGAATATGAACACAGTTTTAGTACG
CAGTCCCTCGACCGCCCAGATTAAACATATCGTTTCATGTAGGTGTGTTG
GGCGCGATGTATGTGGTTGTAGAAGCGGAAATAGTGGAGTGGTGTACGCG
TTACAGGGCTCCCTTCGATTAATTTTAAGCACAATATTTACGGCAGGGAG
ATTCTAGTGGGCATGCACGTCTGAAAGTAGGGAAACAGGCAATTTCATCC
CCCTCCTTCCACTTTTTGGGATTGAAAGAGTTGGGGGAGGTGTAGTGCCT
AAACTGACAGATGTGTGTCCCCTTGCATTTGGCAAATTTTTGCCGATTTT
AGCACATTGTACAAAGTTACGAATTCTGAAAAATACAAGGCATTTCAGGG
GACATGTTTTTCAACAGTATACTATCGGCAAAAACATGATAACGTTATCG
TTTGTCCAGGCTGGGCTTGTGTTCCTTCTTTTGAACGATATATTTGGCTT
CCAGAAATGTCTTCTTGAATCAAAAAGTTACTTGCACTTCCCGTAATAGT
CGAAGCTTAATGGGGGCAAACGGGGTACAATTGACAATGGGTTTCTGTAT
CAACATCGGTGGCGCCGAGGAAAGTTGAAAGTGCACATCCCCGTCCCTTC
GTATCCTAGTCACAACACATGTTACTCCTCTACTCTACGATCGCCTAGTT
GTACTGCATTGCACTGCGGGAATATAAGCCATTTCTAGCAGGAGCAAGAG
CTATAACCAAATGTTTTCAGACGTTATAATGTAAAACACCAATGTTTCCA
GACGCCGAACATGCGGACCACGATAGTAGAGTGCTCCTATAACAGCAAAA
AGGCACCCCACGCCCCCCGCCATCGTGGGCAACGCTTCGTGGACACGATG
CATTTGATAGGAGGCAGCATCTACACTGTGAAATTCTGCAAATTTCGTTC
TCATGGTCAAGTTTTTCATTATCAAGTGCACATAAGAAATCTTGACTCGA
AAAAAAGCGGCTCCAAGGAATACCCCTAAGTCATCTGCGTGAAACACCTC
CTTCCGGCGCACTCGTTGCTGACTAGATACGAGACGATGGGGTGCCAGGA
TTGACTGTGTACGAGGGCGTCAGCTAGCTTTTCTTGCCCCTCAACGAAGC
GCCAAAGGGCTTGTTCATGCTCCAACAATGAGTCTGAGCCTGAGAAATGT
GGGTCTGATCATCGCGGAGGGCGGAGGCGAAGCGAATGTGGATCTGCCAA
TCAGTTCTGACGCACAGGAGGCCGTAGTTTCGACGCTTAGCGTTGCTTCA
TCTGTGTTGCTGTTTGTTATAATTGCAGGATCAGGTGAGAGTGATGGTCT
CTTCTATCATTTTTCTTGTTGCATTTAGTCGGTATATTTACCCGTGTTGT
TACCAGTCGTCCCGGCAGTGTCTGCTCTCTCTAGTGCATTACGCAGCTTG
TTTTTGTCTTCATATTGTCTGCCCCTCGCTTCTCTCCTGTTTTCCTCGAC
CGTCAAGTTGATGCGGGTGGTGGGTTCGTTTAAACTGTGAAATCGTGCTC
GTGGTCACATGTACTCGTATGTTGCACAGTTAGAACCTGGCTTCTAAGTA
GGCAAAACATTCCAGGCAATTACCAACTCTAGTGACAGCGTATTCAAAGA
AGATCCGGAGCTGTAACAAATCTCGACGATGTGTATAAGCGGTAGACTAC
TACATAGTTTCTGTGTTTCACTTCGCTGCCTTCATGGCGTACCCTTTTAC
TAATTCCGCTCGGTCATACAGTGTGGTCGAGGAGCAATATAGTCATGCTG
GCAGGCGCAGCGTGAGGCTCAACGCAATAGGACCCGGCCGTTGTTCGACG
TTTACTCGTTATACTTTGAATCAAATACAGACTGGGCCCACCAAAAAATA
CCAAAAACGTTTCACAGGCCAAATCTCACGATCCAAAGCGAAAACTACCA
CAAACATGCGACTGCCTGCAAAGGTGTAACCGCCACGGAGTGCGTGCGCC
GCGAGACATGGACTGCAAGCGGTTATTTTTCAAATGTGTTGGTACTAAAG
TCAAGTATGTTATATTTGTGCCCAATTCATGCCCGATTATCCTCAAAATT
GACGAGCGCATTGCTGATACCACGATGGGAACCATGCCACCGGTTTGGGC
TCCCAACTCGCCACCGTTCCAAAGTTATGGCTGAAGCAAAGTTAGGGTAT
AATATCTACGTTATTGTATGTAATTAGAACGTACGTAAAACTTGTTCAAA
ATTAGCATTTCTCACTTGGGTTTTGGGATTTTAGACCTGAAATGTTGAGC
GTGGGTGCGCATCAAAACTTCGGAGGCCGTCAAAGAAGATTCCTTCTGTT
TTTTTTTGTTTTTTTGTTTTTAAGTAAACTGCGGATCTTTAGGTCGTAAA
ATCAGTTAAAGCGCCATTGTTTTCAGAACAAATGAGATATCAAGAGGTAT
AGCTTCAGCTGTATCCGAAATTTTGATGCGCACCTACCCTCAAAATTTCA
GATCCAAACTTCGAAAAACCAAGTAAGAAATACTCATGGAATGTTTTTTG
TCTCTCTTGCTGGGCCCAGCCTGTAGCATCGGTTGTTACCAGTATCCCGG
CCGTTTTGAACTAACATCGTGGCTATCCGAAACCATATAGCAAGGTTAGA
AAGTTCCCTGCTTTCCCATTCAGGAGATGAGAGAAGATATATTTGGTTCG
CTTGGAGGGTTACAGTAAGTTGGTTGGGGCGATCAGCGTCCTCGCAGGAT
CATTAAACGCTGCCCGCCTATCTGTTCGTACACCACAACATGACGGAGTT
GAATGTTGCTGTAGCTCCAGTTCATGTCTCGATAGAATACGAGTTAGGTT
TCTGCTGGACAAAAGACCTCTTGCAGGCAAGTACAGAGGTAACGCTTACC
CTCACCCGTCCGCGACGTTACCGCCGATCATGAACACACGTCCGTAAATG
CAGTTTACATCACATTCAATGAGTGGAGAACCAACCAAGCCACCGAGAAA
GCGGACAAATTCATCAAGAACACCGGGGAACTGCCCCCCAGTGACCTCCC
GGCCAAGGCTCCGAACGGAGATAGCGAAGAGGATGACGATGCAGGAAACC
GCCGATACCGCCGAATGGCCAAGCGGGAAAAGCAAAGGGGGAGATTGTGA
TGCGGAAATAGTAGATGTGGTGTCCGAAGTAGGTGGCTGTGGTTGATCAC
CGAGAGACGTTTTGCTTGCATTACAGCACGATGGCCATGCTCGCTCGGGG
TAAAATTTGTCATTGACCGTAGAGGCCCGTGTTTAAATACGCGTTTATGT
TGTTTCTATTTCCACGCACGCTTGAGACTCACCAGGGATAGAATACCTGA
AGGGCAACTGGCATTTATCAGACGTTAACCGAATGGCGTTGGTTTTTTAT
ATTTAGAATACATGTTGTGACTTCATGTGTACATACTGCAAGATTGCCAT
TACTGTCACCCTCAGTGTCGATGTCACGTTCGGCATGACTTACAAACGAG
AAGAGGTGTGGTGCAAATATCAGCAGAATGTTTTGTGTTTCGGGAAGCCT
TTACCCAGGTACACTGTGGCTTCCTTTTCCCCGCTCAAGAATCTCCGTGT
GGTTAGGACGTCGACTGTGTTCCACCTTTCACCATTTGATGTGAAACGTC
TGCACGTAAATAGCCCAGATGCATTAATTGTAGAGGTGAACGATTTGCAG
GTCCATATCGTTGTAGGTATGTGAGTAAGGCAGCTTAACTTTTCTAGAAC
GCGATAGGGTAAACGAGTGGTACAGACAAATACACACGCACAATCTGAAC
GATGGTTGAGCACATGATCCTCCTCCTCTATCTGTTACCTATTTCTTCAC
AGTTTGGAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig638:8433..15191- >mRNA_H-paniculata_contig638.14184.1 ID=mRNA_H-paniculata_contig638.14184.1|Name=mRNA_H-paniculata_contig638.14184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1098bp|location=Sequence derived from alignment at H-paniculata_contig638:8433..15191- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGCGGTCATCTTGGCTCCTTCTCCTCTTCTATGGCGTGGCAGAGTC
CTTCGTTGGCCCTACATTGCTCTCGGGACGCGCAAATACAGTCTATGCTG
CGGTCATCTTGGCTCCTTCTCCTCTTCTATGGCGTGGCAGAGTCCTTCGT
TGGCCCTACATTGCTCTCGGGACGCGCAAATACAGTCTATACGAGACGAT
GGGGTGCCAGGATTGACTGTGTACGAGGGCGTCAGCTAGCTTTTCTTGCC
CCTCAACGAAGCGCCAAAGGGCTTGTTCATGCTCCAACAATGAGTCTGAG
CCTGAGAAATGTGGGTCTGATCATCGCGGAGGGCGGAGGCGAAGCGAATG
TGGATCTGCCAATCAGTTCTGACGCACAGGAGGCCGTAGTTTCGACGCTT
AGCGTTGCTTCATCTGTGTTGCTGTTTGTTATAATTGCAGGATCAGATAC
GAGACGATGGGGTGCCAGGATTGACTGTGTACGAGGGCGTCAGCTAGCTT
TTCTTGCCCCTCAACGAAGCGCCAAAGGGCTTGTTCATGCTCCAACAATG
AGTCTGAGCCTGAGAAATGTGGGTCTGATCATCGCGGAGGGCGGAGGCGA
AGCGAATGTGGATCTGCCAATCAGTTCTGACGCACAGGAGGCCGTAGTTT
CGACGCTTAGCGTTGCTTCATCTGTGTTGCTGTTTGTTATAATTGCAGGA
TCAGTTTACATCACATTCAATGAGTGGAGAACCAACCAAGCCACCGAGAA
AGCGGACAAATTCATCAAGAACACCGGGGAACTGCCCCCCAGTGACCTCC
CGGCCAAGGCTCCGAACGGAGATAGCGAAGAGGATGACGATGCAGGAAAC
CGCCGATACCGCCGAATGGCCAAGCGGGAAAAGCAAAGGGGGAGATTGTG
ATTTACATCACATTCAATGAGTGGAGAACCAACCAAGCCACCGAGAAAGC
GGACAAATTCATCAAGAACACCGGGGAACTGCCCCCCAGTGACCTCCCGG
CCAAGGCTCCGAACGGAGATAGCGAAGAGGATGACGATGCAGGAAACCGC
CGATACCGCCGAATGGCCAAGCGGGAAAAGCAAAGGGGGAGATTGTGA back to top
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