mRNA_H-paniculata_contig63753.14175.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: D7G8M9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8M9_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 6.370e-22 Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 1 QEHPEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVFR 153
+E P+ Y+P WG FCSWGIS EDWW D LGP ADPN WLIT DG LH FR
Sbjct: 148 EESPKSYIPQWGGFCSWGISREDWWNADELGPPADPNQWLITDDGGLHFFR 198
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: D7G5N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N6_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 3.190e-18 Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 10 PEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVFR 153
P Y+PAWG FC++GI+ EDWWT +LGP +DPNSWLIT D VL +FR
Sbjct: 131 PLDYIPAWGGFCAYGIAAEDWWTVSTLGPPSDPNSWLITDDNVLRIFR 178
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: A0A7S2CFY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CFY1_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.940e-13 Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 1
Query: 10 PEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVF 150
P Y P WG FC +GIS E WWTK +LGPDA+PN W I DG L+ F
Sbjct: 130 PTSYFPKWGGFCGYGISEETWWTKSTLGPDANPNVWSII-DGDLYFF 175
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: A0A6H5JXZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ9_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 4.480e-13 Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 1 QEHPEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVFR 153
+ PEKY+PAWG FCS+GIS+ED W D LGP ++P+ WLI D L++FR
Sbjct: 159 ESDPEKYLPAWGGFCSFGISHEDIWGPDVLGPPSNPDIWLIEDDR-LYLFR 208
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: A0A6V1WB01_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WB01_HETAK) HSP 1 Score: 69.3 bits (168), Expect = 4.810e-13 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 10 PEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVFRR 156
PEKY+P +GAFCSWGIS E +WT +LGP DPN W I + +L +R
Sbjct: 125 PEKYVPKYGAFCSWGISAESFWTPSTLGPPVDPNVWQIYAGELLLFYRE 173
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: A0A7S3JR48_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR48_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.310e-11 Identity = 26/48 (54.17%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 7 HPEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVF 150
+P+KY+P +G FCS+GI+NE +WTKD+LGP+A+ N W+I D H+F
Sbjct: 195 NPDKYVPKFGGFCSYGITNEFFWTKDTLGPNANKNVWIIYDD---HLF 239
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: D7FW15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW15_ECTSI) HSP 1 Score: 63.9 bits (154), Expect = 8.840e-11 Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 1 QEHPEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVFR 153
+ PE+Y+PAWG FC +GIS+E W D LGP ++P+ WLI D L++FR
Sbjct: 159 ESDPERYLPAWGGFCGFGISHEVVWGPDVLGPPSNPDFWLIEDDR-LYLFR 208
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK) HSP 1 Score: 61.2 bits (147), Expect = 4.100e-10 Identity = 22/51 (43.14%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 1 QEHPEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVFR 153
+ PEKY+PAWG FC++G++ E WWT +++ P++W I DG L F
Sbjct: 62 ESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRII-DGRLFFFH 111
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: F0Y5C1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5C1_AURAN) HSP 1 Score: 60.8 bits (146), Expect = 1.820e-9 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 10 PEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVF 150
P +Y P +G FCS+GIS+E +WTK +LGP ++PN W I DG L VF
Sbjct: 77 PARYAPKFGGFCSYGISDETFWTKSTLGPFSNPNVWRIV-DGRLLVF 122
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Match: A0A7S3UXT1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXT1_HETAK) HSP 1 Score: 54.3 bits (129), Expect = 3.450e-7 Identity = 20/51 (39.22%), Postives = 29/51 (56.86%), Query Frame = 1
Query: 1 QEHPEKYMPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVFR 153
+ PE Y+PAWG FCS+G+S E WWT +++ + DG L +F
Sbjct: 140 ESSPETYVPAWGGFCSYGVSQESWWTAETMRAGVYASGAWRVVDGRLFLFH 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig63753.14175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig63753.14175.1 >prot_H-paniculata_contig63753.14175.1 ID=prot_H-paniculata_contig63753.14175.1|Name=mRNA_H-paniculata_contig63753.14175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp MPAWGAFCSWGISNEDWWTKDSLGPDADPNSWLITSDGVLHVFRR*back to top mRNA from alignment at H-paniculata_contig63753:452..610+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig63753.14175.1 ID=mRNA_H-paniculata_contig63753.14175.1|Name=mRNA_H-paniculata_contig63753.14175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=159bp|location=Sequence derived from alignment at H-paniculata_contig63753:452..610+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig63753:452..610+ >mRNA_H-paniculata_contig63753.14175.1 ID=mRNA_H-paniculata_contig63753.14175.1|Name=mRNA_H-paniculata_contig63753.14175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=276bp|location=Sequence derived from alignment at H-paniculata_contig63753:452..610+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |