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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 2433 |
| Cds size | 1221 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6327.14121.1 >prot_H-paniculata_contig6327.14121.1 ID=prot_H-paniculata_contig6327.14121.1|Name=mRNA_H-paniculata_contig6327.14121.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp
MLRAEDDVPGPVAIQARDPFAPQRFGTAMTSSTHTILSFQEQEKEKEDGQ
RAQQLPSRMAATEAKDGKAAAVVGEGATVAPARSAERCRRIETLPDGAAA
AAASAVVSAGRSVGGQDLRDDDDDDDDRDNREDSDDDISGTGEAGHSPVA
APVAAPVAAPVAAATVPEARQQGKREERSRGGGGGCDDGSASASASAFAS
DSGNSGLNSSTTAVGVEERVSEKQQQQQQQQPARVGTGRTGEEEREETLL
PSPVGGKNPVVGPKAANKGDQLLHDLEASNRRIEERGGEHGSEASDDAVG
GAVGVEGRGGNSHVTGEDDDSNAFIRIVPQVLGMNGDLTCYVAPLPRIFQ
MKERIFQTNASIFQTNARIFQRMSSRPDRRRRRPCLPHLEDMYGCTVPQA
ERILSS* back to topmRNA from alignment at H-paniculata_contig6327:9270..12198+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6327.14121.1 ID=mRNA_H-paniculata_contig6327.14121.1|Name=mRNA_H-paniculata_contig6327.14121.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2929bp|location=Sequence derived from alignment at H-paniculata_contig6327:9270..12198+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATGATCCGAGGACGCTCAGCCCCGTCGTGTCGGTGGAGAGAAGGGTAT
ATGATGTTGATTTGCCGCCGGCAGGCGTCCTTCCCTCCGGCGAGAATTAT
CCGAGCGAGCGATTAGAGAAGGAGGGTGATGAGGGTGACCGTGATGATGG
AGCGGTTTCGGAACCTGAGACTGTGGTGCGCGGTGAAACAGCGGTGGCTT
GGTGTGACGATGTGGATAGTGAGGGGGGATAGCGTAGTAGTGATTACGAT
GATGAAGGTTGTAACGACAACAATTCCGAAGCGGATACGGTGGTCCAAGG
ACCGTTGGATATCAGCTGGGCCGAAACTCAAGAAGAAGATTCCGTACCGG
AGGCGGAAAACGAACGAGAAAAAACAGGGAAAAACTCTCTGATAGCAGCA
GCCGCGAATCGCTCATCGACGGCGGATGATTGGAGTTCCCGTGTACGATC
ACTTTGTACGCCTTCGCAGGAACAGCAGCAGGCCTCGCTCAGCTCACCAG
GAGTAGCAGCAGCAAGAACAAGAACAACAATAACAACAACGTCAACACCC
GCTGCTAACCTGAACGCCGAGCTTCTGACCATGTTGCGGGCCGAAGACGA
TGTGCCTGGTCCGGTGGCGATACAAGCCAGGGACCCATTCGCTCCTCAAA
GATTCGGGACGGCGATGACGAGTAGCACTCACACGATTCTCTCGTTCCAG
GAGCAGGAGAAGGAGAAGGAAGATGGTCAACGTGCCCAACAGCTGCCGTC
ACGCATGGCCGCCACGGAGGCGAAAGACGGGAAAGCAGCAGCAGTAGTAG
GAGAAGGAGCAACAGTAGCACCAGCAAGGTCGGCGGAAAGATGCCGGCGG
ATCGAGACTTTGCCCGACGGCGCTGCTGCTGCTGCTGCTTCTGCTGTTGT
GTCGGCCGGCAGGAGCGTGGGAGGTCAAGACTTGCGAGATGATGATGATG
ATGATGATGATAGGGACAATAGGGAGGACAGTGATGACGATATTTCGGGA
ACTGGGGAGGCAGGTCACTCACCGGTTGCGGCACCGGTTGCGGCACCGGT
TGCGGCACCGGTGGCAGCGGCAACTGTCCCTGAAGCGCGACAACAAGGAA
AACGCGAAGAACGCAGCAGAGGTGGTGGTGGTGGTTGTGATGATGGTAGT
GCTAGTGCTAGTGCTAGTGCCTTTGCTAGTGATAGTGGAAACAGTGGTCT
AAACTCCTCCACGACGGCTGTGGGGGTGGAGGAAAGGGTGAGCGAGAAAC
AGCAGCAGCAGCAGCAGCAGCAGCCTGCACGAGTTGGAACTGGTCGAACC
GGGGAAGAGGAGAGAGAGGAGACATTGCTGCCGTCTCCTGTAGGAGGTAA
AAATCCCGTAGTAGGCCCAAAAGCTGCCAACAAGGGAGATCAACTTCTTC
ATGACCTTGAGGCATCAAACAGGCGTATTGAGGAGCGAGGTGGTGAACAT
GGCAGCGAAGCGAGCGACGATGCGGTGGGAGGCGCTGTGGGTGTTGAGGG
CAGAGGCGGCAACAGTCACGTGACTGGTGAAGATGATGATTCGAACGCTT
TCATCAGGATAGTGCCGCAGGTGTTAGGGATGAACGGAGATCTGACCTGC
TACGTAAGCAATTGAGGGCGTGTTCGAGGTTGCAACTTTGGTGTGACCCC
TATGTATCCTAATTCGTCACGTATTGTTGAATGTCAAAATGGCGTCCAAG
GCTGCTTGCTGTGTACTACGGATGCCAAGCAGTACACAAAAAGGCTCAAC
AAGAGTAGAACAGAACACTGTTTCATCACTTCGAAGCCCGGAAAAGAGCG
AATGGAGCTCGTCTCTCTCTCTTCGAAGTTCAATCAATCTCGTTCTTCTG
TTCTCTGCAGTTGTGTACCGTTCGTTGAACTGTCCTGATTCCTGCCTGCC
ATGTTTTTTCACTTTCAAATTTTCACGCTTGTCTCCGTCAGCACTCAAAT
TACCGCTCGCAACGCGATGATCTGACCCTCTCGTTGTTCCGTTTTTCAAA
CCACTTCCAACCCCCCGATCGCGCCCGGACAACGCTGCCCGATCTCCTCT
AAGATGGGCGACACTGCTGCTTCTACTTCTCCGACCGACGGCGACACAGG
TAGCGCCGCTACCAAGAATTTTCCAGATGAAAGAGAGAATTTTCCAGACG
AACGCGAGCATTTTCCAGACGAACGCGAGAATTTTCCAGAGGATGAGCAG
CCGCCCCGACCGCCGCCGTCGCCGCCCCTGCCTGCCACATCTGGAAGATA
TGTACGGGTGTACGGTTCCACAGGCAGAGCGAATATTGTCAAGTTGACGA
GGGATTGGCTATTTTCCTCGTAGTAGTGTTATACTAGCGAGTCAACTCGT
GGTGCTTTTCCTGCAGATCAATTCGAACTTGTAGTTTTGTGATTGTATAC
TAGCACATGTCAACCGTGATGTGACCGGTGTTGTTATTATATTTTAGAGT
CGTTGGAGGTTAGTTAGGGTTGTTGCTCACACTTCTGGGGGGGCACTCCT
CTCTGCTTCTGAGAGCGGAGTTATACCCAGAATTCTTGAAAACGTTGTGG
ATTTCGTGATGTTATGTTTTTTTGTTCCTGCTTCATGTTTTTTTAGCGCA
CGTTCGTGGGAGCTGTTTGCGTACTTCTTTCGTGAAGCAGTCGCTTTCAA
TCAAACTCCGAACAAAGGCAGGCGGGGGTCGGGTCAGTACTCTGTGCCGA
AATAGAGGCATGATCGGTGATATGATTTTTCTCTCCTAGTGTACTATAGT
GAGTGTAGTTGGGCTGCGGCTGCGCCAGGGTAGAAGCCAGGGTGGGGATA
TATTTCTGTCCCACAACTTTGTATCGTTATGGCTATTTATTGATACCTTT
GTCAAATTTGAGATTTAAAAAAAAACGAGCATATCATTCGAAGGCTCACA
CTTTCGGCTTGCCCACACACATAATCCCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig6327:9270..12198+ >mRNA_H-paniculata_contig6327.14121.1 ID=mRNA_H-paniculata_contig6327.14121.1|Name=mRNA_H-paniculata_contig6327.14121.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2442bp|location=Sequence derived from alignment at H-paniculata_contig6327:9270..12198+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGCGGGCCGAAGACGATGTGCCTGGTCCGGTGGCGATACAAGCCAG
GGACCCATTCGCTCCTCAAAGATTCGGGACGGCGATGACGAGTAGCACTC
ACACGATTCTCTCGTTCCAGGAGCAGGAGAAGGAGAAGGAAGATGGTCAA
CGTGCCCAACAGCTGCCGTCACGCATGGCCGCCACGGAGGCGAAAGACGG
GAAAGCAGCAGCAGTAGTAGGAGAAGGAGCAACAGTAGCACCAGCAAGGT
CGGCGGAAAGATGCCGGCGGATCGAGACTTTGCCCGACGGCGCTGCTGCT
GCTGCTGCTTCTGCTGTTGTGTCGGCCGGCAGGAGCGTGGGAGGTCAAGA
CTTGCGAGATGATGATGATGATGATGATGATAGGGACAATAGGGAGGACA
GTGATGACGATATTTCGGGAACTGGGGAGGCAGGTCACTCACCGGTTGCG
GCACCGGTTGCGGCACCGGTTGCGGCACCGGTGGCAGCGGCAACTGTCCC
TGAAGCGCGACAACAAGGAAAACGCGAAGAACGCAGCAGAGGTGGTGGTG
GTGGTTGTGATGATGGTAGTGCTAGTGCTAGTGCTAGTGCCTTTGCTAGT
GATAGTGGAAACAGTGGTCTAAACTCCTCCACGACGGCTGTGGGGGTGGA
GGAAAGGGTGAGCGAGAAACAGCAGCAGCAGCAGCAGCAGCAGCCTGCAC
GAGTTGGAACTGGTCGAACCGGGGAAGAGGAGAGAGAGGAGACATTGCTG
CCGTCTCCTGTAGGAGGTAAAAATCCCGTAGTAGGCCCAAAAGCTGCCAA
CAAGGGAGATCAACTTCTTCATGACCTTGAGGCATCAAACAGGCGTATTG
AGGAGCGAGGTGGTGAACATGGCAGCGAAGCGAGCGACGATGCGGTGGGA
GGCGCTGTGGGTGTTGAGGGCAGAGGCGGCAACAGTCACGTGACTGGTGA
AGATGATGATTCGAACGCTTTCATCAGGATAGTGCCGCAGGTGTTAGGGA
TGAACGGAGATCTGACCTGCTACATGTTGCGGGCCGAAGACGATGTGCCT
GGTCCGGTGGCGATACAAGCCAGGGACCCATTCGCTCCTCAAAGATTCGG
GACGGCGATGACGAGTAGCACTCACACGATTCTCTCGTTCCAGGAGCAGG
AGAAGGAGAAGGAAGATGGTCAACGTGCCCAACAGCTGCCGTCACGCATG
GCCGCCACGGAGGCGAAAGACGGGAAAGCAGCAGCAGTAGTAGGAGAAGG
AGCAACAGTAGCACCAGCAAGGTCGGCGGAAAGATGCCGGCGGATCGAGA
CTTTGCCCGACGGCGCTGCTGCTGCTGCTGCTTCTGCTGTTGTGTCGGCC
GGCAGGAGCGTGGGAGGTCAAGACTTGCGAGATGATGATGATGATGATGA
TGATAGGGACAATAGGGAGGACAGTGATGACGATATTTCGGGAACTGGGG
AGGCAGGTCACTCACCGGTTGCGGCACCGGTTGCGGCACCGGTTGCGGCA
CCGGTGGCAGCGGCAACTGTCCCTGAAGCGCGACAACAAGGAAAACGCGA
AGAACGCAGCAGAGGTGGTGGTGGTGGTTGTGATGATGGTAGTGCTAGTG
CTAGTGCTAGTGCCTTTGCTAGTGATAGTGGAAACAGTGGTCTAAACTCC
TCCACGACGGCTGTGGGGGTGGAGGAAAGGGTGAGCGAGAAACAGCAGCA
GCAGCAGCAGCAGCAGCCTGCACGAGTTGGAACTGGTCGAACCGGGGAAG
AGGAGAGAGAGGAGACATTGCTGCCGTCTCCTGTAGGAGGTAAAAATCCC
GTAGTAGGCCCAAAAGCTGCCAACAAGGGAGATCAACTTCTTCATGACCT
TGAGGCATCAAACAGGCGTATTGAGGAGCGAGGTGGTGAACATGGCAGCG
AAGCGAGCGACGATGCGGTGGGAGGCGCTGTGGGTGTTGAGGGCAGAGGC
GGCAACAGTCACGTGACTGGTGAAGATGATGATTCGAACGCTTTCATCAG
GATAGTGCCGCAGGTGTTAGGGATGAACGGAGATCTGACCTGCTACGTAG
CGCCGCTACCAAGAATTTTCCAGATGAAAGAGAGAATTTTCCAGACGAAC
GCGAGCATTTTCCAGACGAACGCGAGAATTTTCCAGAGGATGAGCAGCCG
CCCCGACCGCCGCCGTCGCCGCCCCTGCCTGCCACATCTGGAAGATATGT
ACGGGTGTACGGTTCCACAGGCAGAGCGAATATTGTCAAGTTGAGTAGCG
CCGCTACCAAGAATTTTCCAGATGAAAGAGAGAATTTTCCAGACGAACGC
GAGCATTTTCCAGACGAACGCGAGAATTTTCCAGAGGATGAGCAGCCGCC
CCGACCGCCGCCGTCGCCGCCCCTGCCTGCCACATCTGGAAGATATGTAC
GGGTGTACGGTTCCACAGGCAGAGCGAATATTGTCAAGTTGA back to top
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