mRNA_H-paniculata_contig6323.14116.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 637 bits (1642), Expect = 9.850e-206 Identity = 365/706 (51.70%), Postives = 456/706 (64.59%), Query Frame = 1
Query: 259 SSLGCYGDKDDRLF--DDKIT-DGKMTPARCEEHCEGYAFFGLQYGVECWCGREGTDYTKYGEAS-CDMDCGGDSGVTCGGSYALNIYSMGSVSDDPG-------------SIGCYGDSKNDRIFSNKWEDYEDMGPNRCARHCLN--AGAVYYGTQYGSQCWCGDGDAKYDRHGPAK-CNMPCSGVPDRFCGGYDAMSVYVIDSSPTPISESXXXXXXXXXXXXXXXXXXXXXXXPVWEMPEYEAGC----TKASWRYASGTGPSGRAYIEGSGLEGNECFTLTDLYIAR----DG--KAPLYVTDVDGNELP-GSDPTGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKLDGQTCEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPPEVSEDGRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQDCHDLQFLDATETSWYDNAPGDACLK 2283
S GCY D DR+ D ++ + MT A C + CEG +FG+Q+G EC+C G + GE+ C+M C GDS CGGSYA+ +Y S+GC+ D +DR+ S + + A +C + G+ Y+GT+Y +C+C D G A C+M CSG CGG++A+ VY+++ P P XXXXXXXXXXXXXXXXXXXXXXX + E + C + S+RYA+ +G +GR Y EG G CFT+TDLY R DG K P+Y+ D DG +L S T WLL ELY+ G + Y GT AGGD + LRIQS ++ FHEVRG+GGSL F+ T V SWDT +E YE GRSFLNCVSEKL G CEG AKN+ G CRMDII+SE+ YLGYFDSESYG+TWKVRGFC D SNPEVF+ T+V+GD+ GSDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTI++N V+NNVNHGIIASKRCNNVKI++NEV DGGA AAGIFLHRS+D V++N + +M DAG+A LESFD+++Y NI KYGIR+SLG GNNE +F +++YGLYTY+GSD P+VS DGRP N+ N V D GVK KE D + N F + +F ++T T W N GD C++
Sbjct: 178 SFAGCYVDSPDRVLSGDSMMSVNSVMTTAYCADFCEGSDYFGVQFGYECFCSSSGDTPDELGESEDCEMACSGDSSEICGGSYAIQVYEYSDXXXXXXXXXXXXXXXXXYESVGCFVDDSSDRVLSG--DSMLSINSVMTAAYCADFCEGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVYMLEDGPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEG-----CFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLV-----EDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDGCIE 868
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 513 bits (1321), Expect = 3.420e-162 Identity = 283/606 (46.70%), Postives = 368/606 (60.73%), Query Frame = 1
Query: 532 DPGSIGCYGDSKNDRIFSNKWEDYEDMGPNRCARHCLNAGAVYYGTQYGSQCWCGDGDAKYDR---HGPAKCNMPCSGVPDRFCGGYDAMSVYVIDS-SPTPISESXXXXXXXXXXXXXXXXXXXXXXXPVWEMPEYEAGCTKASW-RYASGTGPSGRAYIEGSGLEGNECFTLTDLYIARDGKAPLYVTDVDGNELPGSDPTGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKLDGQT--CEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVRGFC-VDKS-----NPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPPEV-SEDGRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQDCHDLQFLDATETSWYDNAPGDACLKSGSSTFSE 2307
DP S+GC+ D+ + R+ + D + M P+ C +C + G YY Q+ +CWC D HG C+ C G D+ CGG+ A +VY + + S TP P C A+ R+ AY EG G C TLT +Y A++G PLYV D + N++ G PTGYWLL L V+ G+ L VHGT A GDAD+LR+ S ++ F EVRGYGG+L F+ST V SWDTD G RE GRSF+NCV++ D C+G++ + G CRMDII S MG +G+FD+ESYGLTWKVRG C +D N E+F++ +V+GDI S+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTIS+N V+ N NHGIIASKRCNNVKI++NEVYDGG A GIFLHRS+D EV++N V++M DAG+A +ES+D+ +YDN F N +YGIR+SLG G N F G+T+YGLYTY GSD P+V + +GRP +N+F NT+ E D GV KE D + N F +F D+++T+W DN G CL GS+ F+E
Sbjct: 70 DPNSLGCFADTSDGRVMEAQLTD-QAMTPDMCNAYCEDLGYYYYAVQWSIECWCAPETTTADELAVHGLGTCDFACGGDSDQICGGFWAFTVYEVGTESTTP-------------------------------TPSATTSCDSAATVRFTDDI-----AYFEGGG-----CGTLTQMYEAQEGDGPLYVLD-ENNDVVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDD-FIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTI---ETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT-GGGCLD-GSTDFAE 626
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 478 bits (1229), Expect = 3.040e-151 Identity = 251/470 (53.40%), Postives = 313/470 (66.60%), Query Frame = 1
Query: 991 AYIEGSGLEGNECFTLTDLYIAR----DG--KAPLYVTDVDGNELPG-SDPTGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKLDGQTCEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVR---------GFCVDKSNPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPPEVSEDGRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQDCHDLQFLDATETSWYDNA-PGDACLKSGSS---------TFSEAQGLP 2322
A + + E CFTLTDLY R DG K PLY+ D G+++ + T WLL+ ELYV GAI Y G++ GGD D LRIQS + ++EVRG+GGS+ F T V SWDT +E YEGGRSFLNCVSEKL G+TC+G AKND G CRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+ T+V+GDIK SDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +++N V+NN NHGIIASKRCNNVKIYDN+V DGG A GIFLHRS+D+ EVY N + +M DAG+A LESF++ ++DN + V++GIR+SLG G N F + +GLYTY GSD P+VS GRP N F++N V + A GVKFK +D + N+F +L+F DA T+W N+ P C+ + +S TFS + G+P
Sbjct: 10 AIVVHTDAESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVT-----NSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFSSSSGVP 461
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 465 bits (1197), Expect = 7.070e-147 Identity = 242/450 (53.78%), Postives = 303/450 (67.33%), Query Frame = 1
Query: 1015 EGNECFTLTDLYIAR------DGKAPLYVTDV-DGNELPGSDPTGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKLDGQ-TCEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPPEVSEDGRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQDCHDLQFLDATETSWYDNA-PGDACLKS--GSSTFSEAQGLPPAC 2331
+G CFTL+DLY + + K P++V D D + + TG WLL +L+V GA LY G GG+ LRI+S F E+RG+GG+L F+ T V SWD D +E Y+ GRSF+ CVSE L G+ TC A N+ G CRMDIIDSEMGYLGY SE+YG+TWKVRGFC D SNP+VFD+ +V+GD+KGSDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL I+ N V+NNVNHGIIASKRCNNVKIYDNEVYDGGA AAGIFLHRS D EVY N + +M DAG+A LE+ ++DN + ++GIR+ LG NN+ FK + G++TY GSD P V GRP +N F++NT+ E GVK KE+D N F +++F +A + W N+ P + CL+ +STF+ + GLP C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATE-----TGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 465 bits (1197), Expect = 9.150e-146 Identity = 239/431 (55.45%), Postives = 292/431 (67.75%), Query Frame = 1
Query: 1015 EGNECFTLTDLYIAR---DGKAPLYVTDVDGNELPGSDP---TGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKLDGQTCEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPP-EVSEDGRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQDCHDLQFLDATETSWYDNA-PGDACLK 2283
EG CFT+TDLY R DG A + ++D + +P + WLL EL++ GA+ Y G+ GGD D LRIQS FHEVR +GGS+ F+ST V SWDT + Y GGRSFLNCVSEKL G+ C G+A+N+ G CRMDII+SE+GYLGYFDSESYGLTWKVRGFC D SNP+VFD T+V+G++ GSDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT IIASKRCNNV+IY+NEVYDGG AAGIFLHRS+D V++N VHDM DAG+A LES ++ +Y+N F +VK+GIR+SLG N F+ V+ GLYTY+GSD P + DGRP +N+F +N ++ GVK KE D T+ N F +L+F DA T W N P C+K
Sbjct: 83 EGEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNV-----TKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIK 496
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 461 bits (1187), Expect = 4.330e-140 Identity = 242/462 (52.38%), Postives = 307/462 (66.45%), Query Frame = 1
Query: 985 GRAYIEGSGLEGNECFTLTDLYIARDGK---APLYVTDVDGNELPGSDPTGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKLDGQ--TCEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPPEVSED--GRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQDC---HDLQFLDATETSWYDN-APGDACLKSGSST--FSEAQGLPPAC 2331
G+ YI G G C TLTD+Y A+ G PL+V D + N + GS PTGYWLL +++V +G++L VHG DAGGDA +LRIQS + ++E+RG+GGSLSF TKV SWDTD V +Y+ RSF+ CVSE+L + TC+G A N G CRMDII SEMG +GY +ESYG++WKVRG+C + NPEVF+ T V GDI SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L I++NTVW N NHGIIASKRCNNVKI+ N VYDGG A GIFLHRS+D CEV+ N V+DM DAG+A +ES + ++DN F NVKYGIR+S+G N +F +YG+YTY+G+D PE S+D G +N FH NTV GVK ++A+G + N+F + + +F D + W +N P D CLK + LP C
Sbjct: 398 GKNYIRGGG-----CATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGS-PTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV--------EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 429 bits (1104), Expect = 1.310e-132 Identity = 227/422 (53.79%), Postives = 278/422 (65.88%), Query Frame = 1
Query: 952 SWRYASGTGPSGRAYIEGS--GLEGNECFTLTDLYIARDGKAPLYVTDVDGNELPGSDPTGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKL--DGQTCEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPPEVSEDGRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQ 2205
S RYA G + R Y+E + G C TL ++ +R GK PLY D D + S TG WLL ELYV G L V+G++AGGDAD LR+ S NE F +R +GGSL F STKV SWDT + ED GRS+++ +SE + + +TCEG AKN G RMDI SE+GYLGY+DSESYGLTWKVRGFC DKSNPEVFD+ +V+G++ SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI N V+NN HGIIASKRCN V I NEVY G +AGIFLHRS+D V NYVHD DAGLA LESF++ V +N FEN KYG+R S+G +N T +Y Y+Y G+D P+V GR +NN+F N+ AE+ +K KEADGT N F+
Sbjct: 45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTS-ATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLST-NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEET-----IKIKEADGTQFLDNVFE 456
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 425 bits (1093), Expect = 1.560e-131 Identity = 227/448 (50.67%), Postives = 289/448 (64.51%), Query Frame = 1
Query: 982 SGRAYIEGS-GLEGNECFTLTDLYIARDGKAPLYVTDVDGNELPGSDPTGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKL--DGQTCEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPPEVSEDGRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQDCHDLQFLDATETSWYDNAP-GDACLK-SGSSTFSEA 2310
S R YIE + G C TL ++ + +PLY D ++ S TG WLL E+YV G L VHG AGGDAD LR+ S + H +R YGGSL F STKV +WDT +D GRS+++ VSE + D QTC G+AKN+ G RMDI +SEM YLGY +E+YGLTWKVRGFCVDK NPE+FD+ +V+G+I SDIHH +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI N VWNN HGIIASKRCN V I NEVY G + +AGIFLHRS+D+ V NYVHD DAGLA LESF++ V DN FEN KYG+R+S+G G N G ++ ++Y G+D PEV + GR ++N+F +N +I ++ + KEADGT N F+D ++F+DAT+T N D+ LK +TF E+
Sbjct: 24 SARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRS-ATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIH-LRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVES-----ILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDES 464
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 425 bits (1092), Expect = 7.760e-131 Identity = 225/423 (53.19%), Postives = 281/423 (66.43%), Query Frame = 1
Query: 946 KASWRYASGTGPSGRAYIEGS-GLEGNECFTLTDLYIARDGKAPLYVTDVDGNELPGSDPTGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKL--DGQTCEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPPEVSEDGRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQ 2205
+ S RYA G + R Y+E + G C TL ++ +R GKAPLY D D ++ ++ TG WLL ELYV G L V+GTD GGDAD LR+ S +E + +R +GGSL F TKV SWDT + ED GRS+++ VSE + + +TCEG AKN G RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD+ +V+G++ SDIHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI N V+NN HGIIASKRCN V I NEVY G +AGIFLHRS+D V NYVHD DAGLA LESF++ V +N FEN KYG+R+S+G +N +KY YTY GSD P+V GR +NN+F N+ AE+ +K KEADGT N F+
Sbjct: 48 EVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETE-TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLST-SETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEET-----IKIKEADGTQFLDNVFE 460
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 427 bits (1098), Expect = 1.880e-127 Identity = 228/451 (50.55%), Postives = 283/451 (62.75%), Query Frame = 1
Query: 1000 EGSGLEGNECFTLTDLYIARDGKAPLYVTDVDGNELPG----SDPTGYWLLKGELYVIQGAILYVHGTDAGGDADILRIQSNDNELFHEVRGYGGSLSFKSTKVISWDTDAGNVREDYEGGRSFLNCVSEKLDGQ--TCEGKAKNDAGICRMDIIDSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDNTDVFGDIKGSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTISHNTVWNNVNHGIIASKRCNNVKIYDNEVYDGGAQAAGIFLHRSTDSCEVYNNYVHDMYDAGLANLESFDSKVYDNIFENVKYGIRISLGGGNNEXXXXTFKGVTKYGLYTYKGSDPPEVS-EDGRPENNIFHDNTVICAEDADDAAGVKFKEADGTMAFGNDFQDCHDLQFLDATETSWYDNAPGDACLKSGSSTFSEAQGLPPAC 2331
+ S G C TLTD+Y + G PLYV D N + G + PTGYWLL L ++ G LYVHGT AGGDAD+LRIQS D++ F E+RG+GGSLSF T V SWDTD G R +YEGGRSF+NCV++ D +C G++ + G CRMDIIDS MG +G+FD+ESYGLTWKVRG C D SN E+ D+ +V+GDIKGS+I+ MYYGMYSYGHQGGVWT+N M DN YGFDPHDDSD LTI+ NTV+ N NHGIIASKRCNNV+IY L +ESF +++YDN EN KYGIR+SLG +N+ TF + YGLYTYKGSD P+VS DGR ++N F NT+ + A +K KE D N F++ +F D+T+T W +N G CL S+ F A G P+C
Sbjct: 406 DSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQSTDDD-FWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAL--MESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVA-----MKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIGGGCLDE-STDF--ASGSIPSC 845 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6323.14116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6323.14116.1 >prot_H-paniculata_contig6323.14116.1 ID=prot_H-paniculata_contig6323.14116.1|Name=mRNA_H-paniculata_contig6323.14116.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=737bp MARCASAVALVLLPGSLAIKGSLRIPSHDAILQHTAQDVSQSLASSLGCYback to top mRNA from alignment at H-paniculata_contig6323:785..10999- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6323.14116.1 ID=mRNA_H-paniculata_contig6323.14116.1|Name=mRNA_H-paniculata_contig6323.14116.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10215bp|location=Sequence derived from alignment at H-paniculata_contig6323:785..10999- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6323:785..10999- >mRNA_H-paniculata_contig6323.14116.1 ID=mRNA_H-paniculata_contig6323.14116.1|Name=mRNA_H-paniculata_contig6323.14116.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4422bp|location=Sequence derived from alignment at H-paniculata_contig6323:785..10999- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |