mRNA_H-paniculata_contig630.14080.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: D7G777_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G777_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.300e-73 Identity = 111/173 (64.16%), Postives = 130/173 (75.14%), Query Frame = 1
Query: 82 MNEISLYGSGGKPDWFMKLNPKGEVPVLVVEGSPIVGSEETVDFLMIKDIVDSEGVERTTTASRWRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFGFPAGCAWLETWYASACRRPSVKKTIRKDFWWWW 600
M E+SLYGSGGKP WFM LNPKGEVPVLVV+G PIVGSEETVDFLM ++ + A RWR+++N++LK GKRAVFSGGS D SLNAVL +L++CL +GP S FTAADASAFPFLQR+HGEFGFP+ C LE WYASA RP V+KTI++DFWWWW
Sbjct: 1 MKEVSLYGSGGKPSWFMDLNPKGEVPVLVVDGKPIVGSEETVDFLMPGEL--------SPEALRWRSIVNDRLKSAGKRAVFSGGSETDRNSLNAVLQDLEACLS------NGP-ERASEFTAADASAFPFLQRVHGEFGFPSECKRLEAWYASASSRPGVRKTIKQDFWWWW 158
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: A0A835ZAS3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS3_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.250e-53 Identity = 103/193 (53.37%), Postives = 120/193 (62.18%), Query Frame = 1
Query: 7 FITNMKCPYAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVV-EGSPIVGSEETVDFLMIKDIVDSEGVE-RTTTASRWRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFGFPAGCAWLETWYASACR-RPSVKKTI 576
FITN CPYAQR WIALEESGTPY+M E+SLYG+GGKP WF LNPKGEVPVLV +G+ I SE +D L + + R A+ RAL+N +LKP GKRAV S A A L A L E+D+ L GP+ G F AADASAFPFL R+ EFGFP G LE W A AC R V+ T+
Sbjct: 12 FITNKMCPYAQRVWIALEESGTPYEMAEVSLYGAGGKPAWFTALNPKGEVPVLVTADGAVIADSEAILDHLARPNSPLAPPPPCRAAHAAALRALVNARLKPAGKRAVLRP-SPAATAELMAALREIDAALATP-----GPYACGDAFCAADASAFPFLWRVRKEFGFPDGARALEAW-ADACEARAGVRATL 197
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: A0A6V1LE72_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LE72_HETAK) HSP 1 Score: 179 bits (453), Expect = 7.570e-53 Identity = 88/196 (44.90%), Postives = 118/196 (60.20%), Query Frame = 1
Query: 1 VRFITNMKCPYAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVVEGSPIVGSEETVDFLMIKDIVDSEGVERTTTASRWRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFGFPAGCAWLETWYASACRRPSVKKTIRKDF 588
+RF+TN CP+AQRTWIAL ++G ++M EI+LYGSGGKP WF++LNP+GEVPVL + G +VGSE T+D + + WR NE+L P+GKRAV SGG A L ++L E D+ + GPF+ G T AD S FP +QR+ EFGFP G L TW+ S P+V +T + +
Sbjct: 69 IRFVTNKMCPFAQRTWIALLQAGMEFEMVEINLYGSGGKPGWFLRLNPRGEVPVLDLGGGAVVGSEATLDHVAAAAAPELRPPGLEQEIKEWRRRTNEQLLPIGKRAVQSGGREA----LTSLLEEFDASV-------TGPFLTGEQVTVADISMFPMMQRVESEFGFPQGSEKLRTWFDSMMALPAVSETCQASW 253
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: A0A6U5F461_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5F461_9STRA) HSP 1 Score: 163 bits (413), Expect = 5.560e-47 Identity = 86/197 (43.65%), Postives = 119/197 (60.41%), Query Frame = 1
Query: 4 RFITNMKCPYAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVVEGSPIVGSEETVDFLMI--KDIVDSEGVERTTTASRWRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFGFPAGCAWLETWYASACRRPSVKKTIRKDF 588
RFITN CPYAQ+ W+ALE G Y + EISLYG GKPD+F +LNP G VPV+V + SE+ +D+L + +D EG E + WR+L+ K+ PVGKRAVF+ +D L A+L + G G GP++ G++ ++AD +AFPF RI EFGFPA C L++W + P KKT++K +
Sbjct: 50 RFITNRMCPYAQKAWLALELDGRDYTLEEISLYGPNGKPDFFWELNPAGTVPVMVSCNDVVCDSEDILDYLNVDGEDTDGGEGGEEGV--AYWRSLVKNKISPVGKRAVFA----SDPTELFALLVGNEDAGGGVDGKIVGPYLCGAVPSSADCAAFPFFWRIESEFGFPAECNKLKSWLNTCLSNPKFKKTVQKSW 240
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: A0A7S1A063_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A063_NOCSC) HSP 1 Score: 155 bits (393), Expect = 1.850e-44 Identity = 79/197 (40.10%), Postives = 115/197 (58.38%), Query Frame = 1
Query: 1 VRFITNMKCPYAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVVEGSPIVGSEETVDFLMIKDIVDSEGVERTTTASRWRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFGFPAG-CAWLETWYASACRRPSVKKTIRKDF 588
+ +TN CP+AQ+ W+ALEES PY EISLYG GKP WF++LNP+G+VPVLVV+G+ ++ SE +D++ + ++WR I +++ P GK V GGS+ + A L+A L EL+ L E G G + G F+ ADA+A PF+QR+ EF P L W+ RR V KT+++ +
Sbjct: 12 LELVTNAMCPFAQKAWVALEESKLPYTSREISLYGPNGKPPWFLRLNPRGQVPVLVVDGNAVIDSESILDWIATE--AQHMAPPDAHLGAQWRRCIGQRVAPGGKALVLGGGSQ-EKAILHAALRELEEILQE----GRGAYAAGGSFSVADAAAVPFMQRLCEEFDLPGDDTPLLRAWWERVKRRDGVAKTLQQSW 201
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: A0A1Z5JT15_FISSO (Glutathione S-transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT15_FISSO) HSP 1 Score: 154 bits (390), Expect = 1.180e-43 Identity = 87/210 (41.43%), Postives = 118/210 (56.19%), Query Frame = 1
Query: 1 VRFITNMKCPYAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVVEGSPIVGSEETVDFLM----IKDIVDSEGVERTTTASR-----WRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFGFPAG--CAWLETWYASACRRPSVKKTIRKDFWWW 597
VR ITN CP+AQ+ W+ALE S PY+M EISLYG+GGKPDWF KLNP G VPVLV E + D ++ ++V V + T + R WR INE L P GK+AV G+ +++A + + + L+S L + D ++ G+ T AD AFPFL R+ EFG G C L W ++P +KTI+ +WWW
Sbjct: 31 VRLITNKMCPFAQKAWLALECSQIPYEMEEISLYGAGGKPDWFWKLNPAGTVPVLVQEMASATKVWPDSDLILQAIGAGEVVCDNNVLQMTESQRNDVDEWRKQINEML-PTGKKAVLGSGNTSELAKM--LQDNLESKLSSQ----DTDYLVGNAVTIADCHAFPFLWRLDQEFGLATGLNCPKLGAWVERRSKQPEFRKTIQSAWWWW 233
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: A0A7S1R7Y9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7Y9_ALECA) HSP 1 Score: 152 bits (383), Expect = 1.620e-42 Identity = 77/194 (39.69%), Postives = 112/194 (57.73%), Query Frame = 1
Query: 10 ITNMKCPYAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVVEGS-PIVGSEETVDFLMIKDIVDSEGVERTTTASRWRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFGFPAGCAWLETWYASACRRPSVKKTIRKDF 588
+TN CP+AQ+ W+ALEESG P+ + EISLYG+GGKP+WFMKLNPKGE+PVL+ G +V SE+ +D++ + V E + +R I+ ++ P GK V GG A L+ L +L+ L G + G F+ ADA+A PF+QR+ +G P A L W+ RP V T+++ +
Sbjct: 50 VTNRMCPFAQKAWVALEESGVPFSLTEISLYGAGGKPEWFMKLNPKGEIPVLIKSGGGAVVDSEKILDWVAKE--VPEMSPEDAAAGTAFRRCISGRVAPAGKSRVIRGGGGAG-DDLDKALGDLNDLLEASPGS----YAAGDCFSVADAAAVPFVQRLDERYGLPEEAAALRRWWELVRARPGVAATLQRSW 236
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: A0A0G4FU02_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FU02_VITBC) HSP 1 Score: 150 bits (378), Expect = 2.180e-42 Identity = 82/190 (43.16%), Postives = 116/190 (61.05%), Query Frame = 1
Query: 25 CPYAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVVEGSPIVGSEETVDFLMIKDIVDSEGVERTTTASRWRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFG------FPAGCAWLETWYASACR-RPSVKKT 573
CP+AQRTWIALEE+G PY + E+SLYG+GGKP WF+ LNPKG VPVLV++G P+ SE T+D I ++ S + +WR ++ ++L PVGK AV + S+ ++A+L V+ E ++ L E+ G G F+ G + AD SA PF R+ E FP WL +ACR R +V++T
Sbjct: 2 CPFAQRTWIALEEAGLPYKLTEVSLYGAGGKPKWFLDLNPKGLVPVLVIDGQPVAESEATLDA--IAELAPSLATPTPSKRQQWRDMLEQRLIPVGKAAVLNPSSK-NMAALRVVIAEWEAKLRERPGKGH--FLCGEALSIADVSAVPFWSRLQEEMDCVGAEEFPLTHEWL-----AACRAREAVRRT 181
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: A0A7R9WB00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WB00_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.250e-41 Identity = 82/202 (40.59%), Postives = 108/202 (53.47%), Query Frame = 1
Query: 4 RFITNMKCPYAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVVEGSPIVGSEETVDFLMIKDIVDSEGVERTTTAS-------RWRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFG---FPAGCAWLETWYASACRRPSVKKTIR 579
+F TN CPYAQ+ WIALE G PY+M E+SLYG+GGKPDWF+ LNP G+VPVL G + + I D V G + + + WR I ++ P+GK AV GG +V L ++L ELD G GP++ G T AD +AFPFL RI+ EFG GC + W + PS KT++
Sbjct: 42 QFYTNKMCPYAQKVWIALEVGGCPYEMTEVSLYGAGGKPDWFLDLNPDGQVPVLTCFGGAKIFIDSEYILSRIADGVVEGGSKLSMDSDDDREKMEEWRHAIANRVNPIGKAAVQRGGK--NVKELMSLLKELD-------GKVKGPYLCGETVTVADCAAFPFLWRINDEFGPLTDEEGCGNIRKWLDTCAENPSFSKTVQ 234
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Match: A0A6U5F3A3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5F3A3_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.490e-40 Identity = 77/188 (40.96%), Postives = 112/188 (59.57%), Query Frame = 1
Query: 31 YAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVVEGSPIVGSEETVDFLMI--KDIVDSEGVERTTTASRWRALINEKLKPVGKRAVFSGGSRADVASLNAVLNELDSCLGEKAGDGDGPFVDGSMFTAADASAFPFLQRIHGEFGFPAGCAWLETWYASACRRPSVKKTIRKDF 588
++Q+ W+ALE G Y + EISLYG GKPD+F +LNP G VPV+V + SE+ +D+L + +D EG E + WR+L+ K+ PVGKRAVF+ +D L A+L + G G GP++ G++ ++AD +AFPF RI EFGFPA C L++W + P KKT++K +
Sbjct: 7 FSQKAWLALELDGRDYTLEEISLYGPNGKPDFFWELNPAGTVPVMVSCNDVVCDSEDILDYLNVDGEDTDGGEGGEEGV--AYWRSLVKNKISPVGKRAVFA----SDPTELFALLVGNEDAGGGVDGKIVGPYLCGAVPSSADCAAFPFFWRIESEFGFPAECNKLKSWLNTCLSNPKFKKTVQKSW 188 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig630.14080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig630.14080.1 >prot_H-paniculata_contig630.14080.1 ID=prot_H-paniculata_contig630.14080.1|Name=mRNA_H-paniculata_contig630.14080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp MKCPYAQRTWIALEESGTPYDMNEISLYGSGGKPDWFMKLNPKGEVPVLVback to top mRNA from alignment at H-paniculata_contig630:26783..28273- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig630.14080.1 ID=mRNA_H-paniculata_contig630.14080.1|Name=mRNA_H-paniculata_contig630.14080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1491bp|location=Sequence derived from alignment at H-paniculata_contig630:26783..28273- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig630:26783..28273- >mRNA_H-paniculata_contig630.14080.1 ID=mRNA_H-paniculata_contig630.14080.1|Name=mRNA_H-paniculata_contig630.14080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig630:26783..28273- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |