mRNA_H-paniculata_contig6297.14070.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6297.14070.1
Unique NamemRNA_H-paniculata_contig6297.14070.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 6.840e-103
Identity = 158/284 (55.63%), Postives = 200/284 (70.42%), Query Frame = 1
Query:    1 LFDEHIFLPTGQDLEKVMHEYDRLGFTGAVGSTDVTHIKWDCCPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNFSSSEVQEVGSDHHVLKKNLIAHFSYRRQMNDITWFT 852
            ++ EHIFLPTG   +KVM +YDRLGF+GA GSTDVTHI W  CP + ARSYTGKEG+  +AYQ TVD + RVLAVT GF G+TN KSIIRYD AV  + ED + S++ F +Y  DGT  + KG YLLVDNGYH+  W  L+P SK  +   +  +SK LESVRKDVEC FG++KGRF+ILKL I Y ++EDID+VFF CCILHNMLH++D    +EE+ +W G  GLH+    +P  D S VG + + +S+E  EV S  +  +K LIA F YR+  NDI W +
Sbjct:  201 MYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHK--WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWLS 482          
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 1.210e-96
Identity = 152/285 (53.33%), Postives = 194/285 (68.07%), Query Frame = 1
Query:    1 LFDEHIFLPTGQDLEKVMHEYDRLGFTGAVGSTDVTHIKWDCCPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNFSSSEVQEVGSDHHVLKKNLIAHFSYRRQMN-DITWFT 852
            L+DE+++LPTG+DL KVM +YDR+GF GAVGSTDVTHI W  CP + AR YTGKEG   +A+Q TVD SGRVLAVT+GF GATN K+IIRYD AV  +  D + +++ ++LY +DG   E KG YLLVDNGYH+  W  L+P SK  +   +  +SK LES RKDVEC FG+LKGRF+I KL I + ++E ID+VFF CCILHNMLH+ D    + E+ +W G  GLH+    DP TDYS VG        E  EV +    L+  L+ +F YRR+   DI W +
Sbjct:  126 LYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK--WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDG--QHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406          
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 1.780e-95
Identity = 152/285 (53.33%), Postives = 194/285 (68.07%), Query Frame = 1
Query:    1 LFDEHIFLPTGQDLEKVMHEYDRLGFTGAVGSTDVTHIKWDCCPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNFSSSEVQEVGSDHHVLKKNLIAHFSYRRQMN-DITWFT 852
            L+DE+++LPTG+DL KVM +YDR+GF GAVGSTDVTHI W  CP + AR YTGKEG   +A+Q TVD SGRVLAVT+GF GATN K+IIRYD AV  +  D + +++ ++LY +DG   E KG YLLVDNGYH+  W  L+P SK  +   +  +SK LES RKDVEC FG+LKGRF+I KL I + ++E ID+VFF CCILHNMLH+ D    + E+ +W G  GLH+    DP TDYS VG        E  EV +    L+  L+ +F YRR+   DI W +
Sbjct:  217 LYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK--WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDG--QHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497          
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 1.620e-90
Identity = 140/278 (50.36%), Postives = 187/278 (67.27%), Query Frame = 1
Query:    1 LFDEHIFLPTGQD--LEKVMHEYDRLGFTGAVGSTDVTHIKWDCCPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNFSSSEVQEVGSDHHVLKKNLIAHFSYRRQ 828
            ++DEHI LPT +   L+ V+ +YDRLGFTGA+GS DVTHI W  CP + ARSYTGKEGF  I YQ TVD +GR +AVT+GF G+TN K+ + +D AV+ +  D   +++TF +YN+DGT T  KG Y+LVDNGYH+  W +L+  SK  L   +  +SK LESVRKDVEC FG+LKGR +IL L + +  +E ID+VFF CCILHNMLH  DG+D L E+T+W    G+    V +PE D   VG +      +V+   + H V K+ L   F+YR++
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHK--WQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVE---AGHAVRKRQLTTSFAYRKK 273          
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 4.680e-90
Identity = 149/298 (50.00%), Postives = 190/298 (63.76%), Query Frame = 1
Query:    1 LFDEHIFLPTGQDLEKVMHEYDRLGFTGAVGSTDVTHIKWDCCPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNF---SSSEVQEVGS----------DHHVLKKNLIAHFSYRRQMNDITWFTR 855
            +FDEHI+LPTG  L++VM  + +LG+TGA GSTDVTHI W+ CP +  RS+TGKEGF  IAY  TVD  GR LAVT GF GATN K+IIRYD  V  +   S  ++R ++L   +GT    +G +L+VDNGYHE  W  L+  SK     E+T +S+ LESVRKDV C        F+ILKL + Y ++E +D++FF CCILHNMLH  DGLDV EE+TDWTG  G HD    DP TDY+ VG +         E  E G           DH  LK+ LI  F++R+++NDITW +R
Sbjct:   79 MFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHE--WVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC--------FRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSR 366          
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 3.910e-86
Identity = 149/316 (47.15%), Postives = 194/316 (61.39%), Query Frame = 1
Query:    1 LFDEHIFLPTGQD--LEKVMHEYDRLGFTGAVGSTDVTHIKWDCCPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCS----------------------------DRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNFSSSEVQEVGSDHHVLKKNLIAHFSYRRQ-MNDITWFTR 855
            ++DE I LPT +   L+ VM +YDRLGFTGAVGS DVTHI W  CP + ARSYTGKEGF  IAYQ TVD +GR +AVT+GF G+TN K+I+ +D AV+ +  D   +                            ++TF +YNEDGT T  KG YLLVDNGYH+  W +L+  SK  L   +  +SK LESVRKDVEC FG+LKGRF+ILKL + Y  +E ID+VFF C ILHNMLH  DG+D L E+T+W    G+      +PE D   VG +     ++  ++  +H V K+ L   F+YR++   DI W +R
Sbjct:  128 MYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHK--WQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTK---DVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 2.850e-84
Identity = 141/288 (48.96%), Postives = 191/288 (66.32%), Query Frame = 1
Query:    1 LFDEHIFLPTGQ--DLEKVMHEYDRLGFTGAVGSTDVTHIKWDCCPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNFSSSEVQEVGSDHHVLKKNLIAHFSYRRQ-MNDITWFTR 855
            ++DEHIFLP+ +  +L++VM +Y++LGF GA+GSTDVTHI W  CP +  RSYTGKEG   + YQ TV+ +GRVLAVT+GF G+TN K+II  D AV  +  D   +++ F ++ +DGT    KG YL+VDNGYH+  W ML+  SK  L   +  +SK LESVRKDVEC FG+LK RF+ILKL + Y ++E +D VFF CCILHNMLH HDG+  LEED +W G   L +   +    D S VG +     ++  +V + H  LK+ L  +F YR++   DI W +R
Sbjct:  170 MYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHK--WRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN--TSGHNLDSSSVGTK---DLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSR 450          
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 3.160e-82
Identity = 129/247 (52.23%), Postives = 170/247 (68.83%), Query Frame = 1
Query:    1 LFDEHIFLPTGQ--DLEKVMHEYDRLGFTGAVGSTDVTHIKWDCCPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIR 735
            ++DEHI+LP+ Q  +L+ VM +YDRLGF+GA+GS DVTHI W  CP + ARSYTGKEG   + YQ TV+ +GR +AVT+GF  +TN K+ + +D  V+ +  D+  +++TF +YNEDGT T  KG YLLVDNGYH+  W +LM  +K  L   +  +SK LESVRKDVEC FG+LKG F+I K+ + Y E+E ID+VFF CCILHNMLH  DG+D L E+T W    G       + E D S VG +
Sbjct:  141 MYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHK--WKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAK 385          
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.090e-81
Identity = 129/242 (53.31%), Postives = 166/242 (68.60%), Query Frame = 1
Query:  127 CPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNFSSSEVQEVGSDHHVLKKNLIAHFSYRRQMNDITWFT 852
            CP + ARSYTGKEG+  +AYQ TVD + RVLAVT GF G+TN KSIIRYD AV  + ED + S++ F +Y  DGT  + KG YLLVDNGYH+  W  L+P SK  +   +  +SK LESVRKDVEC FG++KG F+ILKL I Y ++EDID+VFF CCILHNMLH++D    +EE+ +W G  GLH+    +P  D S VG + + +S+E  EV S  +  +K LIA F YR+  NDI W +
Sbjct:    2 CPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHK--WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWLS 241          
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 2.790e-78
Identity = 127/256 (49.61%), Postives = 166/256 (64.84%), Query Frame = 1
Query:  127 CPCSFARSYTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCEDSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCGEETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACCILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNF---SSSEVQEVGS----------DHHVLKKNLIAHFSYRRQMNDITWFTR 855
            CP +  RS+TGKEGF  IAY+ TVD  GR LAVT GF GATN K+IIRYD  V  +  +S  ++R ++L   +GT    +G +L++DN YHE  W  L+  SK     ++T +S+ LESVRKDVEC FG+LKGRF+ILKL + Y ++E ID++FF CCILHNMLH  DGLDV +E+TDWTG  G HD    DP TDY+ VG +         E +E G           DH  LK+ LI  F++R+++NDITW +R
Sbjct:    2 CPFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHE--WVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSR 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6297.14070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE6.840e-10355.63Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE1.210e-9653.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.780e-9553.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI1.620e-9050.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K796_9PHAE4.680e-9050.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE3.910e-8647.15DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBE2_9PHAE2.850e-8448.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE3.160e-8252.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC6_9PHAE1.090e-8153.31DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JQM6_9PHAE2.790e-7849.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6297contigH-paniculata_contig6297:6724..7993 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.8
Seed ortholog evalue7.1e-73
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size858
Cds size858
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930721.4339166-CDS-H-paniculata_contig6297:6723..71731622930721.4339166-CDS-H-paniculata_contig6297:6723..7173Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6297 6724..7173 -
1691481422.2785418-CDS-H-paniculata_contig6297:6723..71731691481422.2785418-CDS-H-paniculata_contig6297:6723..7173Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6297 6724..7173 -
1622930721.4499533-CDS-H-paniculata_contig6297:7585..79931622930721.4499533-CDS-H-paniculata_contig6297:7585..7993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6297 7586..7993 -
1691481422.2880461-CDS-H-paniculata_contig6297:7585..79931691481422.2880461-CDS-H-paniculata_contig6297:7585..7993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6297 7586..7993 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6297.14070.1prot_H-paniculata_contig6297.14070.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6297 6724..7993 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6297.14070.1

>prot_H-paniculata_contig6297.14070.1 ID=prot_H-paniculata_contig6297.14070.1|Name=mRNA_H-paniculata_contig6297.14070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp
LFDEHIFLPTGQDLEKVMHEYDRLGFTGAVGSTDVTHIKWDCCPCSFARS
YTGKEGFAIIAYQATVDLSGRVLAVTKGFPGATNHKSIIRYDLAVQMVCE
DSMCSDRTFRLYNEDGTWTEHKGVYLLVDNGYHEASWAMLMPRSKRALCG
EETRWSKTLESVRKDVECLFGVLKGRFKILKLPILYCEKEDIDSVFFACC
ILHNMLHAHDGLDVLEEDTDWTGVDGLHDPEVADPETDYSRVGIRHNFSS
SEVQEVGSDHHVLKKNLIAHFSYRRQMNDITWFTR*
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mRNA from alignment at H-paniculata_contig6297:6724..7993-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6297.14070.1 ID=mRNA_H-paniculata_contig6297.14070.1|Name=mRNA_H-paniculata_contig6297.14070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1270bp|location=Sequence derived from alignment at H-paniculata_contig6297:6724..7993- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGTTCGATGAGCATATATTCCTGCCGACGGGGCAGGATCTCGAGAAGGT CATGCATGAGTATGACCGCTTGGGGTTCACCGGGGCCGTCGGCTCTACCG ATGTTACCCACATCAAATGGGACTGCTGCCCGTGCTCCTTTGCACGTTCT TACACGGGCAAGGAGGGATTCGCGATCATTGCATACCAAGCGACGGTCGA TCTTAGCGGCCGCGTCCTTGCCGTCACGAAAGGTTTTCCTGGGGCTACCA ACCACAAGTCGATCATCCGTTACGACCTAGCGGTGCAGATGGTTTGTGAG GATTCCATGTGTAGTGACCGGACGTTCAGGCTCTATAACGAGGACGGCAC ATGGACCGAGCACAAGGGTGTCTACCTGCTGGTGGACAATGGGTATCATG AAGCGAGTGTGATACAAGTAACGTCACATTTTGACCCGAAATGTATGTGG GGATTGTATGACACGAGCGACGTGACCGCGTCAGGAGCACAATGTTTCCA CATTGCCGTCAATAAAGGCCCCGATTTAATGTAGCCCAAACGCGTACATA CAGCAGAGGTGAGAAACACGGTACGTATCGCTGTCATCAGTAGGTCGCGA ATTAATTTTTTGACGCCGTCTTAAAACACATACCCGTAGAAAAGGAGGAA CTTCAACATAACATTACATAAAACGTTTCCTATAACATGGTAGCATTGCC GTTTACCCGTCGAAGGGGTCGTTGGCGACCCCTGCGTGAGAGGCCAACAT ACATCCTTGCCCGCTCCGTGCAGACCCAACACTGTCTCAACCACTCCATG GCGTTTTCATGTGCATACAGTGGGCTATGCTCATGCCCCGGTCGAAGCGT GCTTTGTGTGGCGAGGAGACGCGATGGAGCAAGACATTGGAGAGTGTACG AAAGGATGTGGAGTGCTTGTTCGGTGTCCTGAAGGGTCGCTTTAAAATCC TCAAACTCCCCATCCTCTACTGCGAAAAAGAGGACATTGACAGTGTCTTC TTCGCATGCTGCATCCTCCACAATATGCTGCACGCTCACGATGGATTGGA CGTACTGGAGGAAGACACGGACTGGACGGGGGTAGACGGTCTACACGACC CCGAAGTCGCTGATCCCGAGACGGACTACAGTCGGGTCGGGATCAGACAC AACTTCAGCAGCAGCGAGGTACAAGAAGTGGGATCGGACCACCACGTGCT GAAGAAAAATTTGATCGCACACTTCTCATACCGCAGGCAGATGAATGACA TCACATGGTTTACTAGGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig6297:6724..7993-

>mRNA_H-paniculata_contig6297.14070.1 ID=mRNA_H-paniculata_contig6297.14070.1|Name=mRNA_H-paniculata_contig6297.14070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1716bp|location=Sequence derived from alignment at H-paniculata_contig6297:6724..7993- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGTTCGATGAGCATATATTCCTGCCGACGGGGCAGGATCTCGAGAAGGT
CATGCATGAGTATGACCGCTTGGGGTTCACCGGGGCCGTCGGCTCTACCG
ATGTTACCCACATCAAATGGGACTGCTGCCCGTGCTCCTTTGCACGTTCT
TACACGGGCAAGGAGGGATTCGCGATCATTGCATACCAAGCGACGGTCGA
TCTTAGCGGCCGCGTCCTTGCCGTCACGAAAGGTTTTCCTGGGGCTACCA
ACCACAAGTCGATCATCCGTTACGACCTAGCGGTGCAGATGGTTTGTGAG
GATTCCATGTGTAGTGACCGGACGTTCAGGCTCTATAACGAGGACGGCAC
ATGGACCGAGCACAAGGGTGTCTACCTGCTGGTGGACAATGGGTATCATG
AAGCGAGTCTGTTCGATGAGCATATATTCCTGCCGACGGGGCAGGATCTC
GAGAAGGTCATGCATGAGTATGACCGCTTGGGGTTCACCGGGGCCGTCGG
CTCTACCGATGTTACCCACATCAAATGGGACTGCTGCCCGTGCTCCTTTG
CACGTTCTTACACGGGCAAGGAGGGATTCGCGATCATTGCATACCAAGCG
ACGGTCGATCTTAGCGGCCGCGTCCTTGCCGTCACGAAAGGTTTTCCTGG
GGCTACCAACCACAAGTCGATCATCCGTTACGACCTAGCGGTGCAGATGG
TTTGTGAGGATTCCATGTGTAGTGACCGGACGTTCAGGCTCTATAACGAG
GACGGCACATGGACCGAGCACAAGGGTGTCTACCTGCTGGTGGACAATGG
GTATCATGAAGCGAGTTGGGCTATGCTCATGCCCCGGTCGAAGCGTGCTT
TGTGTGGCGAGGAGACGCGATGGAGCAAGACATTGGAGAGTGTACGAAAG
GATGTGGAGTGCTTGTTCGGTGTCCTGAAGGGTCGCTTTAAAATCCTCAA
ACTCCCCATCCTCTACTGCGAAAAAGAGGACATTGACAGTGTCTTCTTCG
CATGCTGCATCCTCCACAATATGCTGCACGCTCACGATGGATTGGACGTA
CTGGAGGAAGACACGGACTGGACGGGGGTAGACGGTCTACACGACCCCGA
AGTCGCTGATCCCGAGACGGACTACAGTCGGGTCGGGATCAGACACAACT
TCAGCAGCAGCGAGGTACAAGAAGTGGGATCGGACCACCACGTGCTGAAG
AAAAATTTGATCGCACACTTCTCATACCGCAGGCAGATGAATGACATCAC
ATGGTTTACTAGGTAGTGGGCTATGCTCATGCCCCGGTCGAAGCGTGCTT
TGTGTGGCGAGGAGACGCGATGGAGCAAGACATTGGAGAGTGTACGAAAG
GATGTGGAGTGCTTGTTCGGTGTCCTGAAGGGTCGCTTTAAAATCCTCAA
ACTCCCCATCCTCTACTGCGAAAAAGAGGACATTGACAGTGTCTTCTTCG
CATGCTGCATCCTCCACAATATGCTGCACGCTCACGATGGATTGGACGTA
CTGGAGGAAGACACGGACTGGACGGGGGTAGACGGTCTACACGACCCCGA
AGTCGCTGATCCCGAGACGGACTACAGTCGGGTCGGGATCAGACACAACT
TCAGCAGCAGCGAGGTACAAGAAGTGGGATCGGACCACCACGTGCTGAAG
AAAAATTTGATCGCACACTTCTCATACCGCAGGCAGATGAATGACATCAC
ATGGTTTACTAGGTAG
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