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Homology
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI) HSP 1 Score: 178 bits (451), Expect = 3.980e-48 Identity = 120/192 (62.50%), Postives = 134/192 (69.79%), Query Frame = 1
Query: 58 ALKGGHMVGIIS---GAGGQQPVSKSMAAFRSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLEHPHAQGSEPPE---GGRLPMQGVSGGMSMGSTGPRQXXXXXXXXXXXXXXXPVGG-HSLASPRKQDQQ---GSIIGRSPMLGPPGSMM 603
AL+G HM G ++ AGGQQ SKS+A FRSLELCD LKLEI NITSE+G H EREEYEKKFR QL EMDRIQHSLKQLQEAH++MKQQYEDEI+RLRH+LE H S+P G +QGVSGGMSMGSTGP Q XXXX PVGG H L SPRKQ Q G+ R PML PG+ +
Sbjct: 47 ALQGAHMAGTVATVAAAGGQQ--SKSVAVFRSLELCDLLKLEIGNITSEMGQHLEEREEYEKKFRQQLAEMDRIQHSLKQLQEAHMVMKQQYEDEIVRLRHQLESSHPLKSDPDSRGGGAGSSVQGVSGGMSMGSTGPSQSHXXXXPHKGLGGM-PVGGPHGLGSPRKQPGQLEPGAASLRGPMLTAPGAQL 235
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: A0A6H5J9G6_9PHAE (Tup_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9G6_9PHAE) HSP 1 Score: 169 bits (429), Expect = 4.370e-48 Identity = 107/181 (59.12%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 79 VGIISGAGGQQPVSKSMAAFRSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLEHPHAQGSEPPE---GGRLPMQGVSGGMSMGSTGPRQXXXXXXXXXXXXXXXPVGGHSLASPRKQDQQ---GSIIGRSPMLGPPGSMM 603
V +GAG QQ S+S+A FRSLELCD LKLEI NITS++G HQ EREEYEKKFR QL EMDRIQHSLKQLQEAH++MKQQYEDEI+RLRH+LE H S+P G +QGVSGGMSMGSTGP Q G H + SPRKQ Q G+ R PML PG+ M
Sbjct: 5 VAAAAGAGAQQ--SESVAVFRSLELCDLLKLEIGNITSQMGQHQEEREEYEKKFRQQLAEMDRIQHSLKQLQEAHMVMKQQYEDEIVRLRHQLESSHPLKSDPDSRVGGVGSSVQGVSGGMSMGSTGPSQSHSSGPPHKGLGGMPAGGPHGVGSPRKQPGQLEPGAASLRGPMLTAPGAQM 183
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: A0A1Y1YE88_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YE88_9FUNG) HSP 1 Score: 67.4 bits (163), Expect = 1.250e-9 Identity = 57/174 (32.76%), Postives = 80/174 (45.98%), Query Frame = 1
Query: 109 QPVSKSMAAFRSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLE----HPHAQGSE--------PPEGGRLPMQGVSGGMSMGSTGPRQXXXXXXXXXXXXXXXPVGGHSLASPRKQDQQGSIIGRSPMLGPPG 594
+P+ + A R EL D LK E E + ++ +++R+E+E K Q+ EM Q +L +L+ AH +KQQYE+EI+RLR +LE HP + G+ PP G P SG MS GP V + P +Q Q G P GPPG
Sbjct: 8 RPMVPAGAGGRIPELLDALKAEFEQVNQDLSMFKMQRDEFEHKISAQISEMSSFQQNLYELERAHQKIKQQYEEEILRLRRELEGRGGHPQSAGTPHQAHQPPPPPNIGHGPSNIFSGIMSGAQNGPNSL---------------VAPPQMMDPNQQPQHPGYPG--PGSGPPG 164
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: A0A7S0MGB8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGB8_9CRYP) HSP 1 Score: 63.2 bits (152), Expect = 3.420e-9 Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 109 QPVSKSMAAFRSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLE 360
Q V S A R E+ D LK E E ++ E ++ +R+E E+K QL E+ +Q SL +L+ H+ +KQ YE+EIMRLR +LE
Sbjct: 53 QGVRTSAVASRLPEVLDNLKSEFEQLSHEASVYKAQRDENERKLEAQLTELSLLQQSLGELERTHLKIKQNYEEEIMRLRRQLE 136
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: A0A1Y1YQS8_9FUNG (WD40 repeat-like protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YQS8_9FUNG) HSP 1 Score: 65.9 bits (159), Expect = 4.210e-9 Identity = 40/97 (41.24%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 109 QPVSKSMAAFRSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLEHPHAQGSEPPEGG 399
+P+ + A R EL D LK+E E + ++ +++R+E+E K QL EM Q +L +L+ H +KQQYE+EI+RLR +LE A+GS P GG
Sbjct: 8 RPMVPAGAGSRIPELLDALKVEFEQVNQDVSMFKMQRDEFEHKISAQLNEMTGFQQNLYELERTHQKIKQQYEEEILRLRRELE---ARGSHPQSGG 101
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: A0A6G0XPL3_9STRA (Tup_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPL3_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.660e-8 Identity = 41/120 (34.17%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 52 QVALKGGHMVGIISGAGGQQPVSKSMAAFRSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLEHPHAQGSEPPEGGRLPM 411
Q+ + GG ++ GQ P+ AA R +E+ + K E E++ ++ ++E E E+K Q+ EMD+IQ ++K L+++ ++QQYED+IMRLR +L EGG++PM
Sbjct: 61 QMNMGGGGNPNVVVQNPGQPPMGGGNAA-RVVEMLESAKNEFESVLQQLNISKIENMELERKITAQVAEMDQIQQTIKALEQSQRRLRQQYEDDIMRLRRQL-----------EGGKMPM 168
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: F4PP30_CAVFA (Transcriptional repressor TUP1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PP30_CAVFA) HSP 1 Score: 62.4 bits (150), Expect = 6.060e-8 Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 139 RSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLE 360
R+ EL D LK E EN+T ++ + +R+EY++KF Q+ E+ +Q +L +L+ H MKQQYE+EIMRL+ LE
Sbjct: 5 RAPELIDNLKSEFENLTHDLVTLKHQRDEYDRKFAAQIQELQSMQQTLAELERQHQRMKQQYEEEIMRLKRLLE 78
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: A0A662WIH0_9STRA (Tup_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIH0_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.610e-7 Identity = 35/86 (40.70%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 103 GQQPVSKSMAAFRSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLE 360
G P + AA R E+ D++K E E ++ ++E+ E E+K + Q+LEMD+IQ +LK L+ H ++QQYED+++RLR +LE
Sbjct: 36 GNPPPQLATAASRVGEMLDQVKAEYEAAVQQLSMAKMEQLELERKIQSQVLEMDQIQQALKGLEANHRRLRQQYEDDLLRLRRQLE 121
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: A0A662XMC3_9STRA (Tup_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMC3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.620e-7 Identity = 35/86 (40.70%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 103 GQQPVSKSMAAFRSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLE 360
G P + AA R E+ D++K E E ++ ++E+ E E+K + Q+LEMD+IQ +LK L+ H ++QQYED+++RLR +LE
Sbjct: 36 GNPPPQLATAASRVGEMLDQVKAEYEAAVQQLSMAKMEQLELERKIQSQVLEMDQIQQALKGLEANHRRLRQQYEDDLLRLRRQLE 121
BLAST of mRNA_H-paniculata_contig628.14043.1 vs. uniprot
Match: A0A2T9YW63_9FUNG (Tup_N domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YW63_9FUNG) HSP 1 Score: 59.3 bits (142), Expect = 7.120e-7 Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 1
Query: 106 QQPVSKSMAAFRSLELCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEAHILMKQQYEDEIMRLRHKLEHPHAQGSEP-PEGGRLPMQGVSGGMSMGSTG 450
+Q + + + R +L + LK E E+I+ + + + +EEYE++ Q+ EM Q SL +L+ +H +KQQYE+EI RLR LE A+G P P+G LP G++ + +G G
Sbjct: 8 RQMMPNAPVSSRVSDLLENLKSEFESISQDATSLKFHKEEYEQRITNQITEMTAFQQSLFELERSHQNIKQQYEEEIYRLRRDLE---ARGGIPAPQGPFLPHGGLNNQVGVGMPG 120
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 181.0 |
| Seed ortholog evalue | 5.4e-43 |
| Seed eggNOG ortholog | 2880.D8LEC5 |
| Preferred name | TUP1 |
| KEGG ko | ko:K06666,ko:K14963 |
| KEGG Pathway | ko04011,ko04111,ko04934,map04011,map04111,map04934 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000122,GO:0000228,GO:0000429,GO:0000430,GO:0000433,GO:0000785,GO:0000790,GO:0000988,GO:0000989,GO:0001076,GO:0001191,GO:0001196,GO:0001198,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006355,GO:0006357,GO:0006950,GO:0006970,GO:0006996,GO:0007154,GO:0007155,GO:0007530,GO:0007531,GO:0007532,GO:0007584,GO:0008150,GO:0008289,GO:0009267,GO:0009372,GO:0009405,GO:0009605,GO:0009607,GO:0009628,GO:0009651,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010570,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016458,GO:0016584,GO:0017053,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019747,GO:0019899,GO:0022414,GO:0022607,GO:0022610,GO:0030154,GO:0030447,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0032502,GO:0032879,GO:0032991,GO:0033554,GO:0033993,GO:0034728,GO:0035091,GO:0035690,GO:0035950,GO:0035952,GO:0035953,GO:0035955,GO:0036033,GO:0036166,GO:0036170,GO:0036171,GO:0036180,GO:0040007,GO:0040008,GO:0040029,GO:0042221,GO:0042304,GO:0042393,GO:0042493,GO:0042594,GO:0042826,GO:0043044,GO:0043156,GO:0043157,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044085,GO:0044111,GO:0044114,GO:0044115,GO:0044182,GO:0044403,GO:0044409,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044764,GO:0044877,GO:0045013,GO:0045014,GO:0045165,GO:0045814,GO:0045827,GO:0045833,GO:0045892,GO:0045893,GO:0045894,GO:0045926,GO:0045934,GO:0045935,GO:0045944,GO:0045990,GO:0046015,GO:0046677,GO:0046688,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051828,GO:0051832,GO:0051834,GO:0052173,GO:0060255,GO:0060258,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0062012,GO:0065007,GO:0070013,GO:0070784,GO:0070887,GO:0071103,GO:0071214,GO:0071236,GO:0071241,GO:0071248,GO:0071280,GO:0071310,GO:0071396,GO:0071470,GO:0071472,GO:0071473,GO:0071496,GO:0071824,GO:0071840,GO:0072364,GO:0080025,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090088,GO:0090089,GO:0090568,GO:0097305,GO:0097306,GO:0097307,GO:0097308,GO:0098609,GO:0104004,GO:0140110,GO:1900428,GO:1900429,GO:1901700,GO:1901701,GO:1901981,GO:1902679,GO:1902680,GO:1902936,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2000217,GO:2000531,GO:2000877,GO:2000879,GO:2001020,GO:2001141 |
| EggNOG free text desc. | WD repeat-containing protein |
| EggNOG OGs | KOG0266@1,KOG0266@2759 |
| COG Functional cat. | B |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03021,ko03036 |
| Exons | 5 |
| Model size | 606 |
| Cds size | 603 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig628.14043.1 >prot_H-paniculata_contig628.14043.1 ID=prot_H-paniculata_contig628.14043.1|Name=mRNA_H-paniculata_contig628.14043.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
AGGSSNSGPSGVQLRHGQVALKGGHMVGIISGAGGQQPVSKSMAAFRSLE
LCDRLKLEIENITSEIGAHQVEREEYEKKFRGQLLEMDRIQHSLKQLQEA
HILMKQQYEDEIMRLRHKLEHPHAQGSEPPEGGRLPMQGVSGGMSMGSTG
PRQPRNPPQPMKRLGSLGPVGGHSLASPRKQDQQGSIIGRSPMLGPPGSM
M back to topmRNA from alignment at H-paniculata_contig628:16274..24269+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig628.14043.1 ID=mRNA_H-paniculata_contig628.14043.1|Name=mRNA_H-paniculata_contig628.14043.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7996bp|location=Sequence derived from alignment at H-paniculata_contig628:16274..24269+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGGGAGGTAGTAGTAATTCAGGGCCGTCTGGAGTACAGCTGCGACACGG
TCAAGTGGCCCTAAAGGTTGGCTTCGCCCAGTTGCTGGCGGTGTGGGTGC
ATGGCTTTATTGTGGAGAGGAGAGGACAGATATTGATGAGCGCGTCATGT
GTAGTGCAGTATCGTGATGTGCGGTTCAGGCGCTGGCATGATAATGTGTT
GTGTTAAATTTTGTATGGAGATGGGTGGTCGAATCCCATCTCTAATAAGG
ACACTTTTCGTCTGCCTCTCCATCTGTCTTGTTGCCGTCCTCTGTAGGAG
AGAGTGTGTGTGTTTGTGCCACAGTACGGTACAGTACAGTACAGTACAGT
ACAGTACAGTACAGTACAGTACAGTACAGTACAGTACAGTACAGTAGAGT
GAAGTACCCTTGGTTGCCGTCCCACACTACTGTAATCTGTTGCGCGACTT
TGGACGGAGGGGGCTGGCCCACACAAAAACGTAGTTTTTGCCACAGACAG
CATTGGAAAGTGTCGGAAATCGTTTGTTTGTACTGTACTGTAGATAAAAA
CAAGAGCCAACTGAAAAAAAAATTGAGGGGCATTGACTTGGTCAGGCGTC
CGATATATGCTCGCCGACAGCAACTTGATTGCACATCCTGGCCGACATAC
GGTAAAGCTGCCTCCATTGGTCGCGTCTGCACAATTCTGGATACGGTCTA
ATACCCGAGACACTGTTGGCGTTGTTGGCTTTCGCTCCGCGCGCTCGTGC
GATACGCCTCTGTGCTTTCCCTAGGGGTCTGTTCTCCAAAACCATCCAAA
GACTGCAGGTCACACACAGGTATTTTTTTTCGTGACCCCAAATCAATATT
TTTTGGGGAAATGGCCGTTGCACTCGTTCCGTTTTCTTCAGGCCACCCAC
ACCAACGCTCGAGCCAAGGGCGGCACTCCCGACCAAACATACACAACGCC
TCTACGACGTGCGTGCGCACTGTGTATTGCTAATCTTTTTCGTGTGCAGG
GTGGACACATGGTAGGGATTATCAGCGGTGCTGGTGGGCAGCAACCGGTT
TCAAAGTCAATGGCGGCTTTTAGGAGCTTGGAGCTGTGCGATCGGCTAAA
GCTGGAGATTGAAAACATCACCTCTGAGATAGGGTGAGGAGATGATGAAT
GCGATGGACCTGCGGCTGGTGTTTGTGTTCGCTGTGTTTGTTTGTCATGC
GGATTCGTGGTCGACGATTTAAAAATACATTACACAAACTCGACTGTACT
AGTCTGTTTCTGTACGCGACAGGCATAGTGTCGATATATTATTTGTTATG
TGTGTGTGACTCCAAGAGGGCGCCAATGCTGCGATGTGTTCCAGAGGAGA
GAGAGATGCACGTTATTTGCTGGAAATCGATTGATTGACTGCTGTCTTTA
GTGACCGTTTTTCTCTGTTTTCCCGTCTTTCACTGATTATTTATATAGTC
CATACCGCACAGAAAAAAACTTGAAATGAATCGTGGACTATTTTTTCACT
CATGTCATACATACTACTGTTTGTATATAACGTCGCTACAACGCTGCCGT
AACCACTGTACTGTATGTATGGAACTGTTTGTCCGTACTCTTCACTTATG
TTCATCAAACGAATTTCGTTTTTTCCCGCCTCCCTCAAAACAGTAGCGCA
AGTAGTTCGAAGAGTGAAGCCAGTTTAATACTAGTCAGTACAGCATTCAG
GGAGACATCTCTCTCTTCGTGCCCCCCGGTCTGTGTTGACAGATATGCTT
GTTGGGCCACTGCACACAGGTGTGCTGCATCTGCCTGCCTATTGTTTGCC
CAACGAGCTCACCGTTCTGTGTAGGTCCTCAAGTATACATGCGTCTGAAT
CTTTCCCGTTTTTTTTTTGCCTAATTCATCATTACAGTCGTTCTATTGAC
AACATTGAGTTGGTGAGACAAGCTGAATGTATGGTGTTTCCTGTCTATAG
CTGTGACGTACAGGCATGCACCCAAAAAGCAAAAAACTCATGTCATGGAT
GAATAAATACATGAACTGAGAATAAGAGAATAATGTATTATAACTGAGAG
GTCTAGAAAAAGCTGGCTCCCTGTCCTCGCTGTCTGTTTCCTGATCTTCC
CAGGCTACAAAAACTGTACACACGTGTGGACAAATTGATCACCTCTTTCT
AGCTGGCAAAGCACCCACAACAAACTGACTGTTCACGTAGGGAACCCCCC
CGGCGTTCACTCGTTTTTTATCCCCCCACCCACGGCGCCACATTCTATCC
GCGACCGTCAAGAGTTGTAATTTGGCTCTGCCAGGAAAAACGTTCGCGAT
GCGTGTATGTCTTGGCTTCCGCTCGGGCGAGCAAGAGCTTAACAATTGCC
TTTTACATACTCTTGTGTATATGTTTGTGGCAAGCAATGATGAATTGATG
ACGGCGGGGACAGAGGGAGGAGGGGGAGGGGTAGAAGGGGAGCGGAGGGG
GGGCTGAGCAGCATGCTGAAGTCAGGAGGCAGCAAGCACTAACTTTGTCG
TGCAGAGTTATCGCCTCTTGAATTGAGAGTCCATATTTCGGGTTGATGAA
TTGTTTTGTTTTCGTGTTTTTCCGGTTGAGTTTTTCAGTGCCAAAGAATG
AGGCACACACGCTCATGGTTGAAGTCCTCGAACTCCACAAATGGAGGAGG
TGTGGTCATTTGTCTGTGTAGTACATCGTTGTACCTACATATTGAGACAT
CAGAGAGCCATCAAACCCTATACTTGATAATACTGTATAACTGTCCATAT
GCCTTGTGCCGTTTGGTATTGGAACCGCTCGGTACCTGCATTCATGAGGC
CGCGATTGCTGTTGGAGCAAAACGCGAATCTGGTTGATTCGTGTGGAGGA
GCCAGATTGTGGTGACATATTTCTCAACGAGTGATCCATAAGGAGCCGGA
CTGTTTCAGTATGTAGCATCTTATATGTCGAAAATAACTGAAAGCCTGTG
AGAGGTATGACGTATTACCCTCTACTAACCTTTAACTTTCAATGATTGTG
TAGACAGTATGTGACTATGGTTATATACCGCTGTACTGTGGTATCACTCC
CGCAGCATGAATTATGTAGGCGAGGAAAATTGAATCACACACGTGATTGG
AATAGTTTGTGATCAAAATCCTCGATACCACAAAAAGGTCCACTCAATCA
TCAAAGATCATCGTGGCACCCTAGCCCAACAATAGAAATGTAATTTGGAA
AAATATATACAAGTTTTTTTCCTTGTTTTTTTCCCGTGCAAAATCTCACA
TTTGAACCTCACGTTGCAAGGCGAGGGAGGACGTTAGCTGGACTTGGCAA
AACAAATCTATCTATCCATCTAGATATCTATATAAATATCACGTGTGTTT
CTCGTCTCTGCATCGTTTTTGTGAGTAGCCACAACACAACACGTCAGCTA
AATTATTCCCAATGGGAATGAATCATAACCTGTCACATATCAGACCCGCA
GCTTGTCTCGAAAAACGGGTTCAAGTAGTGACGAAGGATTTGTCTTGGCT
TATAACCACCCTAATGACGAAAAAGAGTTGGGTAAAAACGAGTCGATTCG
ACTCGCTCACTTTTCATTCGATAACCTTCTGCTTGTGGTATTACTATAGT
TGAGTTAGTGTATCTCAACCGTCGTGTTGGATCAAAGTGGTGAGGTACTG
TTTCGTATTTTAGTCCGAAAGGCGACGGGCAAAAAGTGAGAAGCAAGAGA
GCGAGAACGACCACATGCCCAAGCTACTGTATGCGTAATACCCTCTTGGT
GTACTTCGCAACCATGTACGCTCGAAATCAGTTTGTATTTAGCTATAGAT
CGCCGGTTGTAACCTCTACTATGCGCAGGGGATGGGGGTTACGATTATAT
ATGGTTACCGTTAGTCCCGGCGTTCGTTCTGCTCGTGTTGATGCCCCAAC
AAATCGCTAGCCTCAAAAAGACGGAACGAACTTTTGTCAACCGTTCTTTT
CGTCCAGTTGGGAAAGCAGTAAACAGTCCACATGTATTTATATATATTTA
TATATATAGAGAGAGAGATATTTTGCAGCAACCAAAGTAAGTGGCGATGG
TTGCTGCTACCGGCAGTGCTCGGCGGAGGCGTGTCACCAATGTTCGTCGA
ATGCGATGGTTGAAATGGAATCGATAACTTTTAGCAACACGATGTTTGCG
CATACTACATTTTACTCCACTGTTTTTTTTTTTTTAAACAGTTCCCCCGT
TTACCGACGGAAACGCAAAAATTACGATATTTTGCTTAAGAAAAGTTATG
AAAAGTAAAATCCTAGTGACAAAAAGTGAACTTAATCACAGAAAAATTTT
CCAAAGTTTGGCAGTGCAATGTGGTTGGTCGACACTCCCCGAACACCGTT
ACAAGTGCATGGTGGCTTTCGTTTGCTGGCGATTGCCCCCATCACTACTG
TCTTCGATGGCAACCCCTTCTTATCTGCACTTCGAGATCCACGTTGCTAC
GTAGGGCGGTTTCTGTGTCTTGAAGGGTGAAAAAATTGAAAATGAACACA
AGAGTACCCCTGGGTATTTTCATAGGAGGCGTATAAGACAATCTACTTTG
GCTTGTGCGCACAAGGGTTTTTGTTCTTATTTCCACGGCTTAGCGCTTCA
AAATGGCGATATTCCGAAAGTAAAAAATAACTTTGTAAAATGCATTATAC
GCAAACACCGTAACAGCTTTTGGTTGGTTGCCGAAATCGCATGTGGACAA
AGCTGCGGGCACCACGGGTCCAATGATGAGAAAGTCGTATTTCAGGTGAG
GCCCAACACCTTGTTTTGACGAGAATCACGAGCAGTACTCTTTCTCGCTT
TTATGTAGGAATTAGTATCAGGCAACAATTTTGAACCCCATTTCATAGGC
CGGATTTCTTATCATGTGTTGGCAAAAAATGAGCATTCCGTTTCTGATAG
CTTAATTCCGTACGACCAAGTCGGCACTCTACCCCTGCTCCTCCTTCCCC
TTACACCTAGCCCTTTGAGGGTCAAATCGGGCCCTGGTTGCGCCTAAAAT
CGCCCGAACGTTGCGTCGCTGCGCGGCGTGGTGACGACCCTGGATTGAGG
TTGGTGGAAGAGTTGGGCAGTACACCATAGCACAACCAAATACTGCAGTT
ATTATTTCGTTTGCAACCATGACGTTCGACAGAAATTGATGAACTCTACT
GGCGTGTCGTCAATCAGAACGGCGTGTTATTATTCTTGCCTCAAAGTTCT
CCTTTTTCTTTTAGTGCTAAGACAGCCACTGCCCGAGTAGGACACTAGGA
TTCTCCCTCGAAAAATAAGAACGGGATCTTTGATGAAGAGCGTTGAAGCA
TTATCGTATGACGACACAACCCTTGATCCTCTTGCAATCGGAACGTATCT
AATTATTCCTCGTACAATCGCCAACCTCCGAAATAGGGAGCTGCCGCTGT
TTAGAGAAACGGTATAGTACATGAAGCACAGATAGCAGGGAGGTGGGATT
GCTTTGCTCACAATGACTGGCGCTCGATATTCGTGGTCGGGTGCCATTTC
TGTTCTGAAATTGGCTTTTGGGGCACGGGAGGTCAATCACCCCAAATTAC
CTACACCCCTCCCACTGATTTTTTTGTTTTTTGCACACATCCAACGACTA
ATTACCCGTCTATAACGACTAACCATGACCCCTGAACCGTAGTAAAAAAC
GAAGCTTCTCGTTTTTTGCGTCCTATTTATATACTTGACGCGTTTTATAA
ATCATGTCTATGGGTGATGGGTGATGTTCTGTGTATGTTACAGCTGATCC
CTTCTCAGCGTGACCCCTGTCGGGGGGCGGTCAAGATTTTGTTGTTGAGA
GGTACTACCATCTAATTAGTCGTTTCAGACGATTGCTTAATCGTTGGATT
TGTGGAAAATTGCTCATTTAAAACTTTCAAGCGTTCCTCCTTTGCCGCCC
GCCTTTTCAAATGTTAGTACATAAGGGGAGCCATTGCTACACATGTACAG
TGATCATACTCCCGCGCCCACCGGCTTGTCGCTGTGCTTGTAAGGTGTGT
AGGCACAAGGTCCGCGGGAAAGGTCGTCTATCTTTAAAGTTATATCGGTA
CAGAGTTGGAAATAAACACTTCGTAAACGACCAGATGTCCCATCTTCGCG
TATTGCAAGTGCTACGGACGTGTTGAGCAGTGCTTGCCGTCATGATGATG
AATTGATGGAGTTTGTCACTGACGGATTTTAACGCACATCCCTTGCCTCC
CCCCCCCCCCCCCCCCCCCCCGAACTCTTCCTCCCCTCCCGCTCCGACTC
CTTGCCCTCGCTACACGCGGCTCCTCGTGTTGACGTTCGTGAACTGCTGT
TGTACGTCGCTTGGTTGGAAAAGCAGCGCGCATCAAGTAGAGCGAGAGGA
ATATGAGAAGAAATTTCGAGGGCAGGTATGTTACTGTTTGCTGACTTGAT
GATGTATGATGATGCTGAACACCATTCAGTGGTATTGAAGAGACCACGGC
TACGTAGGCCGCGGATTCACGTGGACAAATGGATGTATAGATTTTGCAAA
ACTTGTTCCAATGACCGTGTGGTGTGCGTAACTTATGACTACTGTTGTTT
TCGCCACGCTGAGGACATATATTTGAGGTATTTTACTGCAGAAAGGAGAA
ACTAATGGTACATATTCGTAAGGAAATGCGACACCCAGCATGCACTATCC
TCCCGAGGGTGAGTGGTCAATGGTCGGTCTTACACGATAAGGCATGCAAC
AGATGAGTGCGCACACCCCCGGCCCCGGGCCTCCACCCACCTTCGTTATT
TCCCATTCCAGGGTTTTATTCAGTTGGTGAGTGCTTCTACTCATAATTAC
CCCCTTCCTCCAGACGGTTGCATGCTCGCACCATGCCGTGCTTCTCTTCT
TTGCATCGTTGTCTCACTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCGG
GCGACACGCAGTTACTGGAAATGGACCGGATTCAACACTCTCTCAAGCAG
CTGCAAGAGGCGCATATACTGATGAAGCAGCAGTACGAGGACGAGATAAT
GCGCCTACGGCACAAGCTGGAGCATCCGCATGCACAAGGATCGGAACCCC
CGGAAGGAGGGCGGTTGGTGAGATATAGAGATACTCATGATGAAACGAAA
ATGACTTTATCAATTGGAGAATGACCTCCCCTTGTAGTGTGGTTTTGCGT
GCGTGTGGTGGCCGTTCTGCATGTGAGTAATACGGTCCTGAATTGTCATT
TGGGCCTCAGGTCCTCAAGATGTGTAAAATGAGTCAACAGTACTACCCGT
AACTTCGCGAAGAAGAACAGCACCCTTCCAGGAGAGGGTTCCCCGCCCTT
GAATCCTGGGATTGCAAACAGAAGGCAATAGCGATTCTAGCTGAGGGAAA
ATGACCTGAAACAACGTCGGCTGAGGTGGATAGGATAGGAAAGAGCGATC
AGCAATTAGTCTTCGGAGATTGCTCGGATAGGAACAAAGCTCTGTCCTAT
CGAGGACGCTTGGCCGATGGTCTAATGAGTAGAGTATGCCAAACATGAGT
TACGTCTCCCTTTTTGGTTATCGTGTAATTTTGCCGATAAGACTACCCAA
GTGAAGTTTGAGATGAGATGTATAAACCTTAATCATGGGTACGATGGAGT
TATCATGTGAGAGTTAGAGCTTAGCTCTACTAACTAACTGTGACACGTGA
GTAGATTGATTTTGAAATGAGAAGCGTGGTCAGTGAAAGGTTGGGGTACT
TTCAAAGTCGGTGTCATTCGTTCAATGACCCCCCCCCTTCCCCCCTCTCC
GCTAAGCTTCGTACACACAACCCGCCCCTGTCCCCAACGAAACCCAGCCC
ATGCAAGGCGTTAGCGGGGGCATGAGCATGGGCTCCACCGGACCACGGCA
ACCACGTAACCCCCCGCAGCCGATGAAGCGCTTGGGCAGTCTCGGGCCGG
TCGGGGGACACAGCCTAGCCTCCCCTCGCAAGCAAGATCAACAGGGGTCC
ATCATCGGACGAAGTCCTATGTTAGGACCGCCGGGGTCGATGATGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig628:16274..24269+ >mRNA_H-paniculata_contig628.14043.1 ID=mRNA_H-paniculata_contig628.14043.1|Name=mRNA_H-paniculata_contig628.14043.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig628:16274..24269+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGGGAGGTAGTAGTAATTCAGGGCCGTCTGGAGTACAGCTGCGACACGG
TCAAGTGGCCCTAAAGGCGGGAGGTAGTAGTAATTCAGGGCCGTCTGGAG
TACAGCTGCGACACGGTCAAGTGGCCCTAAAGGGTGGACACATGGTAGGG
ATTATCAGCGGTGCTGGTGGGCAGCAACCGGTTTCAAAGTCAATGGCGGC
TTTTAGGAGCTTGGAGCTGTGCGATCGGCTAAAGCTGGAGATTGAAAACA
TCACCTCTGAGATAGGGGTGGACACATGGTAGGGATTATCAGCGGTGCTG
GTGGGCAGCAACCGGTTTCAAAGTCAATGGCGGCTTTTAGGAGCTTGGAG
CTGTGCGATCGGCTAAAGCTGGAGATTGAAAACATCACCTCTGAGATAGG
CGCGCATCAAGTAGAGCGAGAGGAATATGAGAAGAAATTTCGAGGGCAGC
GCGCATCAAGTAGAGCGAGAGGAATATGAGAAGAAATTTCGAGGGCAGTT
ACTGGAAATGGACCGGATTCAACACTCTCTCAAGCAGCTGCAAGAGGCGC
ATATACTGATGAAGCAGCAGTACGAGGACGAGATAATGCGCCTACGGCAC
AAGCTGGAGCATCCGCATGCACAAGGATCGGAACCCCCGGAAGGAGGGCG
GTTGTTACTGGAAATGGACCGGATTCAACACTCTCTCAAGCAGCTGCAAG
AGGCGCATATACTGATGAAGCAGCAGTACGAGGACGAGATAATGCGCCTA
CGGCACAAGCTGGAGCATCCGCATGCACAAGGATCGGAACCCCCGGAAGG
AGGGCGGTTGCCCATGCAAGGCGTTAGCGGGGGCATGAGCATGGGCTCCA
CCGGACCACGGCAACCACGTAACCCCCCGCAGCCGATGAAGCGCTTGGGC
AGTCTCGGGCCGGTCGGGGGACACAGCCTAGCCTCCCCTCGCAAGCAAGA
TCAACAGGGGTCCATCATCGGACGAAGTCCTATGTTAGGACCGCCGGGGT
CGATGATGCCCATGCAAGGCGTTAGCGGGGGCATGAGCATGGGCTCCACC
GGACCACGGCAACCACGTAACCCCCCGCAGCCGATGAAGCGCTTGGGCAG
TCTCGGGCCGGTCGGGGGACACAGCCTAGCCTCCCCTCGCAAGCAAGATC
AACAGGGGTCCATCATCGGACGAAGTCCTATGTTAGGACCGCCGGGGTCG
ATGATG back to top
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