mRNA_H-paniculata_contig62086.13948.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: D8LCY7_ECTSI (Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY7_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 6.100e-11 Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLYPTINSAGPTPRL 159
VRAIHLE PFS +NGLLTPT KLKR+Q AY+ V+ LY + + GPT RL
Sbjct: 607 VRAIHLEPDPFSAQNGLLTPTFKLKRAQALEAYSKVIAALYAGLEAGGPTSRL 659
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: A0A5M8FT08_9GAMM (Long-chain fatty acid--CoA ligase n=1 Tax=Thiohalocapsa marina TaxID=424902 RepID=A0A5M8FT08_9GAMM) HSP 1 Score: 62.4 bits (150), Expect = 5.440e-10 Identity = 29/41 (70.73%), Postives = 36/41 (87.80%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLY 123
VRA+HLE P+STENGLLTPTLKLKR++ +T YA+V+E LY
Sbjct: 626 VRALHLERTPWSTENGLLTPTLKLKRAELETHYAAVIEALY 666
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: A0A835ZFW5_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW5_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.550e-9 Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLYPTIN 135
VR +HLE APF+ ENGLLTPT+KLKR++ YASVL++LY ++
Sbjct: 658 VRRVHLEPAPFTPENGLLTPTMKLKRAEAAAHYASVLDELYAAVD 702
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: F9X2E8_ZYMTI (AMP-binding domain-containing protein n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9X2E8_ZYMTI) HSP 1 Score: 57.8 bits (138), Expect = 2.320e-8 Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLYPTINSAGPTPRL 159
VRA+ L PFS EN LLTPTLKLKR QT Y ++++++Y +N+A P RL
Sbjct: 649 VRAVRLMLEPFSIENELLTPTLKLKRPQTAKMYRNLIDEMYVEVNAAAPKARL 701
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: A0A136JIJ8_9PEZI (Long-chain-fatty-acid-CoA ligase n=2 Tax=Microdochium TaxID=67608 RepID=A0A136JIJ8_9PEZI) HSP 1 Score: 57.0 bits (136), Expect = 4.340e-8 Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLYPTINSAGP 147
VRA HLE PF+ +N LLTPTLKLKR QT A+A+ ++++Y IN+ P
Sbjct: 652 VRAAHLEIEPFTIDNNLLTPTLKLKRPQTAKAFATEIDRMYEEINATTP 700
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: A0A061R0V4_9CHLO (Long-chain-fatty-acid--CoA ligase n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R0V4_9CHLO) HSP 1 Score: 55.5 bits (132), Expect = 1.520e-7 Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLYPTIN 135
V A+HL S PFS ENGLLTPT KLKR Q A+ SV++ LY IN
Sbjct: 658 VAAVHLCSEPFSVENGLLTPTFKLKRPQAKEAFRSVIDGLYAGIN 702
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: C4JMM3_UNCRE (AMP-binding domain-containing protein n=1 Tax=Uncinocarpus reesii (strain UAMH 1704) TaxID=336963 RepID=C4JMM3_UNCRE) HSP 1 Score: 54.7 bits (130), Expect = 2.840e-7 Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLYPTINSAG 144
V+ I L PFS +NGLLTPTLKLKR QT AY +L++LY T+ S G
Sbjct: 625 VKNIALMVEPFSIDNGLLTPTLKLKRPQTVKAYRDILDELYATVPSNG 672
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: A0A7E4W672_PANRE (Long-chain-fatty-acid--CoA ligase n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4W672_PANRE) HSP 1 Score: 54.7 bits (130), Expect = 2.840e-7 Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLY 123
V+AIHLE+ PFS ENGLLTPTLK KR Q Y V+E LY
Sbjct: 654 VKAIHLETEPFSIENGLLTPTLKSKRPQLRKKYQQVIESLY 694
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: T0RA78_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RA78_SAPDV) HSP 1 Score: 52.4 bits (124), Expect = 3.120e-7 Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLY 123
VRA+HLE+ PFS EN L+TPT KLKR Q Y++ L+ LY
Sbjct: 63 VRAVHLETEPFSVENDLMTPTFKLKRHQAKVVYSARLDALY 103
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Match: A0A7S0B0H0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B0H0_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 3.570e-7 Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 1 VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLYPTI 132
V+AIHLES PFS ENGL+TPT KLKR Q Y + + LY +
Sbjct: 75 VKAIHLESEPFSAENGLVTPTFKLKRQQLREKYKTEIADLYANL 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62086.13948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig62086.13948.1 >prot_H-paniculata_contig62086.13948.1 ID=prot_H-paniculata_contig62086.13948.1|Name=mRNA_H-paniculata_contig62086.13948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp VRAIHLESAPFSTENGLLTPTLKLKRSQTDTAYASVLEQLYPTINSAGPTback to top mRNA from alignment at H-paniculata_contig62086:328..489+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig62086.13948.1 ID=mRNA_H-paniculata_contig62086.13948.1|Name=mRNA_H-paniculata_contig62086.13948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=162bp|location=Sequence derived from alignment at H-paniculata_contig62086:328..489+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig62086:328..489+ >mRNA_H-paniculata_contig62086.13948.1 ID=mRNA_H-paniculata_contig62086.13948.1|Name=mRNA_H-paniculata_contig62086.13948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=324bp|location=Sequence derived from alignment at H-paniculata_contig62086:328..489+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |