mRNA_H-paniculata_contig6068.13750.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6068.13750.1
Unique NamemRNA_H-paniculata_contig6068.13750.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: A0A355BL19_9FIRM (DNA-binding protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A355BL19_9FIRM)

HSP 1 Score: 102 bits (254), Expect = 1.010e-24
Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 3 
Query:  246 MKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSVK 515
            MKK  +V+ +AEK+GLNK Q+EAAL AF+ ++ +AL AG KV L GFG+FEAR RA R GRNP TGE + I  + VPAF A K LKD+VK
Sbjct:    1 MKKADLVSRIAEKSGLNKKQAEAALDAFVASVQEALQAGEKVQLVGFGTFEARDRAARTGRNPGTGEEIQIPASRVPAFKAGKVLKDAVK 90
[Close]
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: A0A835Z9S8_9STRA (DNA-binding protein HU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S8_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.360e-24
Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = 3 
Query:  246 MKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSVK 515
            MKK   VA ++ K+GL+KTQ++AA+ AF++T+ +A+  G KV+L GFG+FE+R RA RQGRNP+TGE L I  +  PAF+AAKA KD VK
Sbjct:    1 MKKADFVASISAKSGLSKTQTDAAISAFMDTVMEAVADGKKVSLVGFGTFESRERAARQGRNPQTGEALSIPASKAPAFSAAKAFKDRVK 90
[Close]
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: A0A1M6PI97_9FIRM (Bacterial nucleoid protein Hbs n=2 Tax=Anaerobranca TaxID=42447 RepID=A0A1M6PI97_9FIRM)

HSP 1 Score: 100 bits (248), Expect = 7.970e-24
Identity = 54/90 (60.00%), Postives = 64/90 (71.11%), Query Frame = 3 
Query:  246 MKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSVK 515
            M KT+++  +AEK+GL K  SE A+ A LETI DA+ AG KV L GFG+FEAR RA R+GRNP TGE + I  T VPAF A KA KD VK
Sbjct:    1 MNKTELIQSVAEKSGLTKKDSEKAVNAVLETIMDAVSAGDKVQLIGFGTFEARERAAREGRNPSTGEVISIPATKVPAFKAGKAFKDMVK 90
[Close]
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: A0A7G9W854_9FIRM (HU family DNA-binding protein n=1 Tax=Alkalicella caledoniensis TaxID=2731377 RepID=A0A7G9W854_9FIRM)

HSP 1 Score: 98.6 bits (244), Expect = 3.160e-23
Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 3 
Query:  246 MKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSVK 515
            M KT+++  +AEK+GL K  SE A+ A LETI +A+ A  KV L GFG+FEAR RA R+GRNP TGE + I  T VPAF A KA KDSVK
Sbjct:    1 MNKTELIQSVAEKSGLTKKDSEKAVTAILETIIEAVSADEKVQLIGFGTFEARERAAREGRNPSTGEVINIAATKVPAFKAGKAFKDSVK 90
[Close]
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: A0A7S2URZ8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URZ8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 8.710e-23
Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = 3 
Query:  240 ETMKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSV 512
            E  +K   V  +AEKTGL+KT SEAAL A LETIS+AL  G KV++ GFGSF+  +RA R+GRNP+TGE + I +++ P+FTA K LKD +
Sbjct:   69 EVFRKGDFVTSIAEKTGLSKTDSEAALAAVLETISEALVNGFKVSMLGFGSFKVTYRAARKGRNPQTGEEIQISESYAPSFTAGKGLKDKL 159
[Close]
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: A0A254NG98_9BACL (Integration host factor subunit alpha n=6 Tax=Paenibacillaceae TaxID=186822 RepID=A0A254NG98_9BACL)

HSP 1 Score: 97.4 bits (241), Expect = 8.860e-23
Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 3 
Query:  246 MKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSVK 515
            M KT+++  ++EK+G+ K + EA L  F++ +S+AL AG KV L GFG+FE R RAGR GRNP+TGEP+ I ++ VPAF A   LKD+VK
Sbjct:    1 MNKTELINSISEKSGVGKKEVEAVLNGFMDGVSEALAAGDKVQLIGFGTFETRKRAGRTGRNPQTGEPITIPESSVPAFKAGNKLKDAVK 90
[Close]
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: R5N145_9FIRM (Bacterial nucleoid protein Hbs n=2 Tax=Eubacteriales TaxID=186802 RepID=R5N145_9FIRM)

HSP 1 Score: 97.1 bits (240), Expect = 1.290e-22
Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 3 
Query:  246 MKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSV 512
            M KT+++A +AEKT L+K  ++AA+ A L  I+DAL AG K+ L GFG+FE R RA +QGRNPRTGE + +  + VPAF A KALKD+V
Sbjct:    1 MNKTELIAAVAEKTDLSKKDADAAVSAVLGAITDALKAGDKIQLVGFGTFEVRNRAAKQGRNPRTGETMTVPASKVPAFKAGKALKDAV 89
[Close]
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: A0A2S9VEL1_9ALTE (DNA-binding protein HU n=1 Tax=Alteromonas alba TaxID=2079529 RepID=A0A2S9VEL1_9ALTE)

HSP 1 Score: 97.1 bits (240), Expect = 1.290e-22
Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 3 
Query:  246 MKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSVKA 518
            M KTQ++  +A K  L+K  +  AL AF +T+++ L AGSKV+LPGFG+FE R R  RQGRNP+TGEPL I  +  PAF A K LKDSV A
Sbjct:    1 MNKTQLIDAIAGKADLSKAAAARALDAFTDTVTETLAAGSKVSLPGFGNFEVRERGERQGRNPKTGEPLTIAASKSPAFKAGKTLKDSVNA 91
[Close]
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: A0A4R3Z7K3_9FIRM (DNA-binding protein HU-beta n=3 Tax=Erysipelotrichaceae TaxID=128827 RepID=A0A4R3Z7K3_9FIRM)

HSP 1 Score: 97.1 bits (240), Expect = 1.320e-22
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 3 
Query:  246 MKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSV 512
            M KT++V ++AE  GL KTQ+EAA+ AF+ETI+D L AG K+ L GFG+FE R R  R+GRNPRTGE + I  +  PAF A+ ALK+ +
Sbjct:    1 MNKTELVEKVAESAGLTKTQAEAAINAFVETITDGLKAGDKITLKGFGTFEVRQREAREGRNPRTGETMTIAASKAPAFKASSALKNVI 89
[Close]
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Match: A0A6L5GQ70_9FIRM (HU family DNA-binding protein n=3 Tax=Eubacteriaceae TaxID=186806 RepID=A0A6L5GQ70_9FIRM)

HSP 1 Score: 96.7 bits (239), Expect = 1.760e-22
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 3 
Query:  246 MKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKVNLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSV 512
            M KTQ+VA ++EK+GL+K +SE AL AF E+I +AL  G KV+L GFG+F+ R RA RQG NPRT EP+ I+ ++ PAF A KA KD++
Sbjct:    1 MNKTQLVASISEKSGLSKKESEKALSAFTESIVEALQKGDKVSLVGFGTFDVRHRAARQGLNPRTKEPIEIKASNAPAFKAGKAFKDAL 89
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6068.13750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A355BL19_9FIRM1.010e-2460.00DNA-binding protein n=1 Tax=Firmicutes bacterium T... [more]
A0A835Z9S8_9STRA4.360e-2456.67DNA-binding protein HU n=1 Tax=Tribonema minus Tax... [more]
A0A1M6PI97_9FIRM7.970e-2460.00Bacterial nucleoid protein Hbs n=2 Tax=Anaerobranc... [more]
A0A7G9W854_9FIRM3.160e-2358.89HU family DNA-binding protein n=1 Tax=Alkalicella ... [more]
A0A7S2URZ8_9STRA8.710e-2356.04Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A254NG98_9BACL8.860e-2353.33Integration host factor subunit alpha n=6 Tax=Paen... [more]
R5N145_9FIRM1.290e-2256.18Bacterial nucleoid protein Hbs n=2 Tax=Eubacterial... [more]
A0A2S9VEL1_9ALTE1.290e-2256.04DNA-binding protein HU n=1 Tax=Alteromonas alba Ta... [more]
A0A4R3Z7K3_9FIRM1.320e-2255.06DNA-binding protein HU-beta n=3 Tax=Erysipelotrich... [more]
A0A6L5GQ70_9FIRM1.760e-2256.18HU family DNA-binding protein n=3 Tax=Eubacteriace... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6068contigH-paniculata_contig6068:4692..12306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score97.1
Seed ortholog evalue7.9e-18
Seed eggNOG ortholog1123226.KB899302_gene2893
Preferred namehupA
KEGG koko:K03530
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
EggNOG OGs1V9XQ@1239,26Y5Z@186822,4HKK7@91061,COG0776@1,COG0776@2
Ec32 ortholog descriptionHistone-like bacterial DNA-binding protein
Ec32 orthologEc-15_002670.1
COG Functional cat.L
Best tax levelPaenibacillaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03032,ko03036,ko03400
Exons4
Model size669
Cds size465
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6068.13750.1prot_H-paniculata_contig6068.13750.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6068 4763..12173 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930676.8835263-UTR-H-paniculata_contig6068:4691..47621622930676.8835263-UTR-H-paniculata_contig6068:4691..4762Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6068 4692..4762 +
1691481401.8989668-UTR-H-paniculata_contig6068:4691..47621691481401.8989668-UTR-H-paniculata_contig6068:4691..4762Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6068 4692..4762 +
1622930677.0343812-UTR-H-paniculata_contig6068:12173..123061622930677.0343812-UTR-H-paniculata_contig6068:12173..12306Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6068 12174..12306 +
1691481401.9527824-UTR-H-paniculata_contig6068:12173..123061691481401.9527824-UTR-H-paniculata_contig6068:12173..12306Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6068 12174..12306 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930676.8953965-CDS-H-paniculata_contig6068:4762..49271622930676.8953965-CDS-H-paniculata_contig6068:4762..4927Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 4763..4927 +
1691481401.9095113-CDS-H-paniculata_contig6068:4762..49271691481401.9095113-CDS-H-paniculata_contig6068:4762..4927Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 4763..4927 +
1622930676.91138-CDS-H-paniculata_contig6068:8168..82891622930676.91138-CDS-H-paniculata_contig6068:8168..8289Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 8169..8289 +
1691481401.9252856-CDS-H-paniculata_contig6068:8168..82891691481401.9252856-CDS-H-paniculata_contig6068:8168..8289Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 8169..8289 +
1622930677.0028608-CDS-H-paniculata_contig6068:11207..113591622930677.0028608-CDS-H-paniculata_contig6068:11207..11359Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 11208..11359 +
1691481401.9348607-CDS-H-paniculata_contig6068:11207..113591691481401.9348607-CDS-H-paniculata_contig6068:11207..11359Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 11208..11359 +
1622930677.0188158-CDS-H-paniculata_contig6068:12146..121731622930677.0188158-CDS-H-paniculata_contig6068:12146..12173Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 12147..12173 +
1691481401.9436991-CDS-H-paniculata_contig6068:12146..121731691481401.9436991-CDS-H-paniculata_contig6068:12146..12173Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6068 12147..12173 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6068.13750.1

>prot_H-paniculata_contig6068.13750.1 ID=prot_H-paniculata_contig6068.13750.1|Name=mRNA_H-paniculata_contig6068.13750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
MKNILSIIVAAIFAQYGHAFIVTPGVVGRPSCNTLARRGVEPLCAATKEK
AVSTEQETMKKTQIVAEMAEKTGLNKTQSEAALVAFLETISDALGAGSKV
NLPGFGSFEARFRAGRQGRNPRTGEPLMIEDTHVPAFTAAKALKDSVKAS
NADK*
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mRNA from alignment at H-paniculata_contig6068:4692..12306+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6068.13750.1 ID=mRNA_H-paniculata_contig6068.13750.1|Name=mRNA_H-paniculata_contig6068.13750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7615bp|location=Sequence derived from alignment at H-paniculata_contig6068:4692..12306+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTTCCTACTTCTGCTGCCCTTCCTCCTGAGACAGACACCATCCTAATTC
GCGAGAGAATAGAAAAACACCATGAAGAATATCCTGTCCATCATAGTTGC
CGCCATCTTTGCTCAGTACGGACATGCCTTCATCGTGACTCCCGGCGTCG
TCGGGCGCCCGTCCTGTAACACTCTGGCGCGGCGGGGAGTTGAGCCTCTA
TGTGCGGCTACCAAAGAGAAGGCAGTGAGCACTGAGGTACCCTAGATCTA
ATCTACGCACTGTGCGTGTATGTGACACTCGTTTTTGTTGGTTGAGAGGG
TCTGGTAGTACGGTGCTGTGAATCCTCGTATGGGTTTGCCCCGACAATGC
AAGGCTTGAAATTGCCACGTTCGGTAAGTGGACCGTTTTGTCATGATTTG
TCATGTTTATCGACGGCTGCGAATGCCGAGATATGGTGCTGCGAGTACTG
AATGCCGAACTGGTGATTCTGAAAGACCAGCGGTTTACTGTGATCGGCGA
CGTCGATGGTTGTTGAGTGCAGTGCGGTAGATGGGCTTGAGTTGATCAAA
AATGATCATGTCGTGCATGGTGGTTCAGAAACAGAGTAAACCGATTGAAA
AGTTGTTTTGATACCGCCAGACAGTGCGATCCGTGCCTTGAAACTTCCGT
GGCTTTTACTTGGTCGAGAGGGCAATTTTTCGGGCACGCGGGGGGGTGTT
ATCTCGTATGGCTGAAGACCAAAATGTATTCGGTAACAGTTGGGTGGAAT
CAACTGACCAACCGCGGAACGGGAATAGGAGCAAGCTCATCAAATATTGA
TAGCTTACTGACCCAACAGCTGTTCAATTCGGGGCAGCAGAAAAATCCAC
TACATCGGGCGCATCTGGGGGTCTCTTCACAAAAAAGTTCCATGGCGGGC
CGTGAAAAAATGACAATAATCGACTAATTGATGCGCACCACCTCCTCATT
AAGTGATCTTTCTATGTCGTCACGGCAGAAAATGTCGCCTACTGTTCGAA
GTACCATGAAACCCGGGGTTATGGCACCAGGTGTGAAGCGAAATCAAACT
CGGCCGTGACAGATCGCACGATGTGGTAACAGAGGGGGGGGCAATGGCGC
ACCGGGTGAAAAACCAAGTAACTAATCATAACAGATTTGGGAAGGGGTGA
AATCTTGACAGATGTTGTGGGCAGGAAATTCATTCAACAGTTAATGTAGG
TTCGTTCAGAGGTTACCGCGCAGTTATGTACTGACAGTACGGCACGATAT
ACAAAATACCGCCGGGAAGCGTCGTCCATCTCCTTTCTAAGAATACGGTA
TCAGTCCTGGCACTCGCGTGCAGTGCCCTGCCTGTGGTGATGTAGGGCTA
GCTGTGACTGCGGGTCCGAGAAAAAACCATAATATCTGTAAAAAATCAAG
ACGAAAAACTGAAAGAAAAAAGGTATCGCAGCAGCAGGAAGAGAACAGTA
TACTACACTACAAAAAGCAACTGTCGTGTTGATTGCGTTTCTTTTGGCTT
TGCTTTGCTGTGTTTTTCTCCATGGGTGTACTAAGAAACAGTGTCATGTG
TATGTATCTGTGTTATCGTTTTTTTCTGAAAGCAACGAAAGGGCAAAGAC
CGGCAACGCAATGAAAAAACGCAGATGCCCTCGAGTCGTTTTTTCGTGCT
GTTACAACCGTTACCCGCCCTTCGAAAGAGACACCCACCAACTCGAAACG
GATGCCCACAAGACCCCCACCCGTGTTCTTATTCGCACTCCATTTCTTAT
CGCACCCGGTGCAATAACCACGGGGGGAGGTGCGGACCCATAAAACTTAT
TCGTGATTGTCTGCACCGTGCGATATGAAAGGGGCGTGTGAAACCGAGGG
AGGTGTCCTAACCCCGGTTTTTACCGTAGAACGGTAAGCCCTGTAGAAGG
CGGTCACTAACTGTCTGTACAGAGACAGACAGCTGCGCGGATGGGCCAGC
TATCGAAAGTAGACTACGGTGATCGATGGCGCAGTACATGCCACAGAGAG
CCATCTCCCGTGATGGTTCGTGAGCAGTGTGGTACACATCACGATCGCTT
TGCTGGAAAGTAAAGGTATTTGGGGGGGGGAATTTGTTAACAAAAATGGA
TGGGTCATTATTTAGTGTTCAGCGGCAAACAGCGGCGTTTGGAAGGCTGC
GAAGGCTCGTCACGACACGTGAGCACCGCAGCGGCGATACTGCGGGTCTG
ACGCTCAAACTCTGGGATACTGATGACATCTAGTGACAGTAGAGCTGGCC
CAAGTTTGAGCGTTTCCTTGTGTGGTGTGCCCTAGTTGTTCGTAATGCGG
GCAACATGGCAGATTGTAATGATACCCCGAACGAATGAGGTAAAATCTAG
ATAATAGATCCCGATATTTGCCTTTTATAGTACGACATTGTCCCACGTTG
ACGGATCTAATTTTGGGTGTAATTAGATGGGCGTGTCGGGCAGGTCGTGA
GGTTTCCTGCAGACATCGCTTTCCCGGTTATGCTCTATAAATGATCAACT
GGCGCATGGGTTGCCGCATTTTTAGTGAGCAACTAGTTTTGGCCTTTTCG
CGACACCCATAACATTGGATTTAATCTAGTTGTGGGTGCCATGTCGGAGG
CTGTTCTCTGTACTCTCTGTATCCATCTGGGTGCCCTCCTTGGTAAAAGA
TGAAGCATGGATTTATTTTGTGTTGAGGAAATGGATTTCACGTGAAGAAA
TCTAGATCGGGAAACACGTCGTAAAGCTACACTTTATACAAGCGCAAGCC
ACTATACATACTGCAGTCCTGTCCCGCACATTTTTCAGCATCACGTTTCC
CAGTGAGTATGTTCAAGTCAAGAACACTGTTCAGCGTACTTTTTCGACGT
CAGTACAGATGCAAATTTCCTACACGAGTATCGTGTTTTGACGATATCCT
CGCTGATCTAAAACGCTATACCTTGAAATGTTCCTCTTGCGCACACAGTG
CCCCATAATTCGCTGCAATCTCTTCTTGCCTATATTTAGATTTGTACTCG
AACCAGTTCGTATTATACCCCTCTCCAAAAAAAAATCAAAACTTTGAGTG
ACATGTATCCATATACGTTTTAGCGGGACATAATATCCACAATTTGCCGC
CGAACAAGTCACGACCATTATGCGCACGATACACTCCGTATTGCAGAGCT
ATGTATCTCATGTTGGCTACATTGTCGCTACATACGCTCATGTTACGTGG
TGCATGGGGCAACCTTCACAACGCAAATTCCGTGACCTTCGAGTCGAGGC
AATACTACAATACATTATTGAATCACGTTAGCCGATAAAGTTAAGTACAC
GAGGAACACATGACTGCACAAACAAGAAAAGACGGAGGGAAAATCACAAT
CTAATCTCCCCCTTGACAAGCTTCGTCCTCGCGAGGACGTGTGGTCAATG
ACCTACAACTACGGCATGCCAACGTGAGCACCCCCACCCCTGCTCTCTGA
TCGTCTGATTACGCTTCTTGTGAGCAGCAGGAGACGATGAAGAAGACCCA
AATCGTAGCTGAGATGGCCGAAAAGACGGGTTTAAACAAGACGCAGTCTG
AGGCGGCGTTGGTAGCCTTCCTCGAGACAATCTCCGACGCCCTGGGTGGT
GAGTATCACAACGGGCGAGTATCGGCAACCGTTTTACCGTTTACATGTAT
TTTTCACAATTTGCATGAAGAGTTCATTATTCAAATGAACACGCCTTCAC
GGGATCTTCAACCTTCAATAGTAGCCTTCATGCTTGAAATAATAAAATGT
GCGGAGGTGCACTCATATTCTAGGATCGACCAACACTCGATGGAGAAGAG
AAGGATCGATAGCTATCCATTGATTCGAACGGATTTTGGAAAGCGTCAAG
TACTCTTCTCGTGCTCTCATTAACATAATCCGAAATTCGTGACGACCTTC
ATTGACCTTTATCCAAAATGTCGTATTTTTTCATTGGGCCGTGTTGATTC
AACTCTCGGGGAATTTGCTCACACCGCCGTTTGGAATCATTAAAGAGTGT
TTCAGCCAGTCGCTTACACGTGACGAGTTTTTTTCTTGTGAAGTTCAACT
CTAACGAGATTTACCTCAAAGCGTACCCTGGAAAATAGTGTTTCTATTAT
TTAGTTATTACCCGTTGTTGCGTCCACAAAATCACCACCCCGCGGACGAA
TACTAATAAAAGTACTTCAAAAGGCTAGGCTATTTCTTATGGGCGTTCGG
AAATTGCGTTTGAAACTTGAACGGGATATTTTTGACAACAGTTTTTTATG
GGACGGTTCGAAACATGAAAATGCCATCAAGAGCCACGCAGCACGGGCAA
GCCATGTTTCACCGTACCGCACGATGCACAGGCATGATCCACATGTTCCC
AATGTTTGAAAGGCTGGTGGGTTTATTTGTACAAGTTAGCAGTGTCGGGT
GAGGGTATAGACCATGACAACACCCCGGCCGCAGTAGTGAGTTATTATGA
GCTACCTGTCGACAACAGGGCTCTCGTGACATGGGTTATGAACTACGCTC
TTGAGTTCTTCAGCGGAAAGGCCCATAACCTGACACCTGCCAAGTTTTTC
CAAGGAGTGCTCATCTGCTACAGGACCTAGCTGTCGGTGTGCAATGAGGC
TGTATTTGTCTGCTGGGCAGCGGCGAAGACTGTCTGTATGCTGCTGTGGA
GGAGGCGTCTACACAACACATGATTGGGCATCCCTCATCCTCTTGCATTC
CCAAATTTCAAACGGATTCAAATTAGCGTTCGATCCTTGCCAAAATTCGG
ACGCCCAGGGGCTCGATTTTGGGGTTGTTCGAATTTTTACTGGAATATCA
ATTTTCAAACGGCCCTTAAGAACTGGTTTTGGCGTTTGAAAATTGATTCT
TAAACTCAAATTTCGAGCGTCCGTAAGAAATGGCCTTCGGCGAAATTTTT
TCAAGTATTGGCCTTAACCGCCTTTCACCTGGAAGCAGAGAAGACAAGCT
GGCAGAAAGAAACAGGTTTGTTCCAGGGAGCCCCACGCCTAATTACCAAC
TACAATAGATATCAGTCATGTTGTGATGTCCTGACTGCTACCACTGACTG
TGGCAGATCGCCTGCTGCTGCGCCAATGGGTAGCGTCACTCATAGCAAGA
CGCCACACACGTAGCGGCTATCGTTCATTACGGAAATTTGGGATAATATG
CTGAAGCCTGCCACCTCTGGTGCCGCAGATATGATGCTGCACTGTGGACG
CAGCAGTACTGTCTGCGTCATTTGTCGCCGGGCACAAGTCTGGGGCACCG
TGTTGTTCGCTCTGTGTAGCCGACTGACATCGCTCGACGGACCCAATGTG
TGCACTGCAGTGTGTCAGCTGTACTACTTGTACATCAAGTACACGGCCCT
TCGGCTGCTATGCCAGCCGTTGATGTACGTGGATATTGTCAAAAATATCT
CATGCCCTTTTATACCTAGCGTCGACACGTGATACTCTAAGTTCATAGCG
ATAAACCAAAATACGTTGAGATCCCACTGCACTATTTTTCATATGTCCGT
CGAAATTCGATACCCCCCCCCCCCGATGCCGACCCTCCCCCCCCCCCCAA
TGCCAACCCTCTCCCCTCCCCTTTTCCGATGCGGGATTGCCCAAAACCGA
CCGTCGAAATGTGTCAAACTGCAGCCTTGCTGATCTTGAAGGATTAAGGT
TTGTTCAGCATGATCAAGCACGTGTATTCCTATGTGCTCTGGGCCGTCTA
CAACTACTCCGAATAGCAGTAAAACGAATCATTAAACAGGTGCTAACACT
TTACTCAAGTTCCTACACATCCTAAAACTCACATAGTTAGTTTCCTAACT
TTTGTCTGAATCATCCCAATTATTCGTTTTCATCCGGAGGGGTGAAAATC
ACATGATTTTCGGAGGAGGGGATGGGATGGGATCCAGGGCTTCTCATGGG
ATCACAAAATCCTCACGGGACGGGACCACCGTCCCATCCCATCGGAATTT
TGAGGACGGTGTCACGTCCCGTTACATATTCAAATGTCCCAGCCTCGTTT
CATGCTCCCGTTATCAGCCCTGCTTGTGTTCCCCGAATCACCAGCGCGAA
TCGAATAGCACAAAACGTTTGTATTGGGAATGTGGCATCACACCGCTGCG
ACGGCGGCCGCCGCCACTACTCAATGCCCTTTTACAAAAAAAAGTGGTTA
AAAATATCATTTTGACACCTTTTTTTTCATGTGGTTCAGGCTTCGTTGTA
CCCAAACACGAGCAGAATCAACGCTGGTGTCTACCACTAACTCTTAAATT
ATCACCCCCTAGACAGTGTGCGTTGCCAGAGCTCCAATTGGAGCTGCAGC
TAAAAACGCGTGTGTCAGGATGGCTCAGAACAGCGACAACATCGTGGTGA
CTCTTCGCATTAGTAAAAATTATATTAAATGCATAGGATCTGCTAATTTT
ATTGCACGGTCAAGACTATTTTTTTGAAACACATCGTATAAGAAATTTTC
ACTGGATACCGGTAACTAAATTTTCTCTCCCCCGCCAAAAAAATGTATGT
GTGCCTACTATTATAGCTGGGAGCAAGGTTAACCTGCCAGGCTTTGGGTC
ATTTGAGGCGCGGTTCCGAGCGGGTCGGCAAGGGCGCAACCCAAGAACCG
GAGAGCCGCTGATGATTGAAGACACGCATGTGCCAGCGTTTACAGCAGCG
AAGGCGCTAAAAGACTCGGTGTGTGCCAATGCTGAACGTTGAATGATCTT
TATTTTCGGCGCCAATTCACTACAGACCGTGGGGGTTTATCGGAGATGAT
GTAGCCGAGACAAACCTACAGGGTAGATGGAAAAAATTCACTGTGTGTGT
GTGTGTGTGTGTGTCGTTTTCAAAACTGCTTACGCACAGTCGCAACTGGT
ATTCACTTCGGTGTATTTTTGGATGTAAATACGAGCTTGCCGGTGTGTTT
TCACTTTCACGAGTACTAGTTGACACCGGTAGGTCGCCCTTGGAAGACAA
CCCAAGCTCAACAACCCTACCAACGACAAAAAGTCGAGCAGGGGCGGGAT
ATTGCGTCGCCTGTTTCTGCCCGAGGCCTGTGTAATCATATCTACGATTC
TACTGACCCTGGTTCTTTGTTCGGTCGCAAGATATAGATGTAGCACACAT
CTTCCTTGTGTGGCAAAGCATCTTCGGTACTTTCTCGTGAATGCTCTGCG
TGGCGGGGGGCGGGGGGCGGGGGGAAGGGTACTCATGTTCTATATGACGT
AATCGATAGATCGTTAACCAAGCATCCTCGGGAGGACGGAGCTTTGTTCC
TATTAGAGAATGCTTTTTGCTAGGAGGGAGAAAAATTCCAGCCAGAGTTC
GGCTGTTTTGTTTGTTCTCTCTCTATTATATATATATATATATGCCCTTA
TGGGGTCGTTGCCGCCGCTGCCATACCTCACCTTACCTCGTTTCCCCGTG
GTTTCTCCCTCTGTTGCTCTCCCTCGGCCCCTTTGATTGTCGCGGTGCCC
GGTAGGTAAAGGCAAGCAACGCAGACAAGTAGATATGGCAGCATGTTGAG
ATATATTTTAGGGTCGAGGACATGCGGCTGAAGTAGGCCGCGGCGGGCGG
TTTGAGGGGTTCTGGCACTCGAAGAAATCTCTCTTCGAGAGGCGTGTGAT
GCACGCGGGCGGAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig6068:4692..12306+

>mRNA_H-paniculata_contig6068.13750.1 ID=mRNA_H-paniculata_contig6068.13750.1|Name=mRNA_H-paniculata_contig6068.13750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at H-paniculata_contig6068:4692..12306+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGAATATCCTGTCCATCATAGTTGCCGCCATCTTTGCTCAGTACGG
ACATGCCTTCATCGTGACTCCCGGCGTCGTCGGGCGCCCGTCCTGTAACA
CTCTGGCGCGGCGGGGAGTTGAGCCTCTATGTGCGGCTACCAAAGAGAAG
GCAGTGAGCACTGAGATGAAGAATATCCTGTCCATCATAGTTGCCGCCAT
CTTTGCTCAGTACGGACATGCCTTCATCGTGACTCCCGGCGTCGTCGGGC
GCCCGTCCTGTAACACTCTGGCGCGGCGGGGAGTTGAGCCTCTATGTGCG
GCTACCAAAGAGAAGGCAGTGAGCACTGAGCAGGAGACGATGAAGAAGAC
CCAAATCGTAGCTGAGATGGCCGAAAAGACGGGTTTAAACAAGACGCAGT
CTGAGGCGGCGTTGGTAGCCTTCCTCGAGACAATCTCCGACGCCCTGGGT
GCAGGAGACGATGAAGAAGACCCAAATCGTAGCTGAGATGGCCGAAAAGA
CGGGTTTAAACAAGACGCAGTCTGAGGCGGCGTTGGTAGCCTTCCTCGAG
ACAATCTCCGACGCCCTGGGTGCTGGGAGCAAGGTTAACCTGCCAGGCTT
TGGGTCATTTGAGGCGCGGTTCCGAGCGGGTCGGCAAGGGCGCAACCCAA
GAACCGGAGAGCCGCTGATGATTGAAGACACGCATGTGCCAGCGTTTACA
GCAGCGAAGGCGCTAAAAGACTCGCTGGGAGCAAGGTTAACCTGCCAGGC
TTTGGGTCATTTGAGGCGCGGTTCCGAGCGGGTCGGCAAGGGCGCAACCC
AAGAACCGGAGAGCCGCTGATGATTGAAGACACGCATGTGCCAGCGTTTA
CAGCAGCGAAGGCGCTAAAAGACTCGGTAAAGGCAAGCAACGCAGACAAG
TAGGTAAAGGCAAGCAACGCAGACAAGTAG
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