mRNA_H-paniculata_contig59937.13655.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig59937.13655.1
Unique Name	mRNA_H-paniculata_contig59937.13655.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: E6ZES8_ECTSI (Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES8_ECTSI)

HSP 1 Score: 625 bits (1613), Expect = 3.160e-225
Identity = 306/319 (95.92%), Postives = 310/319 (97.18%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLAFRAL 957
            SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGA IYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFII+GLVFVHLGLLHKDGSNNPLGIKTK ANVNFYPYMYVKDLVAFF LL VLS+VIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILR IPNKVGG +TMGGAI IIFLYPLLNTSILRSANFRPIYAVVFWLFVADF LLAWSGTTPVDDYFKVIGAVVSIGYFAFF+FGGLFVG LEKTLAFRAL
Sbjct:   64 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGALIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFVLLSVLSVVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFCLLAWSGTTPVDDYFKVIGAVVSIGYFAFFVFGGLFVGWLEKTLAFRAL 382

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: D0IPB5_SACJA (Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepID=D0IPB5_SACJA)

HSP 1 Score: 611 bits (1576), Expect = 1.710e-219
Identity = 295/319 (92.48%), Postives = 305/319 (95.61%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLAFRAL 957
            SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSG  IYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFII+GLVFVHLGLLHKDGSNNPLGIKTK AN+NFYPY+YVKDLVAFF L+ +LSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILR IPNKVGG +TMGGAI IIF+YPLLNTSILRS NFRPIYAVVFWLFVADF LLAWSGTTPVDDYFK++GAVVSIGYFAFF+FGGLFVG LEK LA R L
Sbjct:   64 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGGVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFVLMSMLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFIYPLLNTSILRSGNFRPIYAVVFWLFVADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGWLEKMLAVRVL 382

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: A0A0A7LKY8_SACLA (Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepID=A0A0A7LKY8_SACLA)

HSP 1 Score: 598 bits (1542), Expect = 2.580e-214
Identity = 291/319 (91.22%), Postives = 301/319 (94.36%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLAFRAL 957
            SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSG  IYVLMMATAFIGYVL  GQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFT  NPTLNRFFSLHYLLPFII+GLVFVHLGLLHKDGSNNPLGIKTK AN+NFYPY+YVKDLVAFF L+ +LSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILR IPNKVGG +TMGGAI IIF+YPLLNTSILRS NFRPIYAVVFWLFVADF LLAWSGTTPVDDYFK++GAVVSIGYFAFF+FGGLFVG LEK LA R L
Sbjct:   64 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGGVIYVLMMATAFIGYVLALGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTAVNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFVLMSMLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMGGAIAIIFIYPLLNTSILRSGNFRPIYAVVFWLFVADFCLLAWSGTTPVDDYFKIVGAVVSIGYFAFFVFGGLFVGWLEKMLAVRVL 382

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: A0A8F0FCD4_9PHAE (Cytochrome b n=1 Tax=Laminaria ephemera TaxID=309364 RepID=A0A8F0FCD4_9PHAE)

HSP 1 Score: 590 bits (1520), Expect = 5.790e-211
Identity = 285/319 (89.34%), Postives = 297/319 (93.10%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLAFRAL 957
            SVEHIMRDV++GWLIRYMHANGASFFFIVVYAHIFRGLYYGSYM PR QLWWSG  IYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFII+GLVFVHLGLLHKDGSNNPLGIKTK AN+NFYPY+YVKDLVAFFALL +LS+VIFY PNSLGDPDNYLEADPY TPAHIVPEWYFLPFYAILR IPNKVGG +TMGGAI IIFLYPLLNTSILRS NFRPIYAVVFWLFVADF LLAWSGTTPVDD++K+ G  VS  YFAFF+FGGLFVG LEK LA R L
Sbjct:   64 SVEHIMRDVENGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMAPRHQLWWSGGVIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALLSMLSVVIFYLPNSLGDPDNYLEADPYSTPAHIVPEWYFLPFYAILRVIPNKVGGIITMGGAIAIIFLYPLLNTSILRSGNFRPIYAVVFWLFVADFCLLAWSGTTPVDDHYKLFGVTVSTCYFAFFVFGGLFVGWLEKILAVRVL 382

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: A0A0U1WNN6_SARFS (Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A0U1WNN6_SARFS)

HSP 1 Score: 575 bits (1481), Expect = 1.440e-204
Identity = 268/319 (84.01%), Postives = 295/319 (92.48%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLAFRAL 957
            SVEHIMRDVKSGWLIRYMHANGASFFF++VYAHIFRGLYYGSYMEPRQ LWWSG  IYVLMMATAFIGYVLPWGQMSFWGATVITS FSI P IGKEVVMW+WGGFTVGNPTLNRF+SLHYLLPF+I+G+VFVHLGLLHKDGSNNPLGIKT++AN+NFYPY+YVKDLVAFF L+F LS+ IFYFPN+LG+PDNYLEADPY TPAHIVPEWYFLPFYAILR IPNKVGG + MGGAIV++FLYPLLNTS+LRS NFRP+YAVVFWLFVADF LL W+GTTPVDDYF+ IG  VS+GYF+FF+FGGLFVG LEK L +  +
Sbjct:   64 SVEHIMRDVKSGWLIRYMHANGASFFFMLVYAHIFRGLYYGSYMEPRQHLWWSGTLIYVLMMATAFIGYVLPWGQMSFWGATVITSFFSIIPVIGKEVVMWIWGGFTVGNPTLNRFYSLHYLLPFLITGMVFVHLGLLHKDGSNNPLGIKTRVANINFYPYIYVKDLVAFFVLVFSLSVFIFYFPNALGEPDNYLEADPYSTPAHIVPEWYFLPFYAILRVIPNKVGGILAMGGAIVMLFLYPLLNTSMLRSGNFRPVYAVVFWLFVADFCLLGWAGTTPVDDYFRFIGITVSVGYFSFFIFGGLFVGWLEKILMWHTI 382

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: A0A8E8PEC1_9PHAE (Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PEC1_9PHAE)

HSP 1 Score: 541 bits (1395), Expect = 2.910e-191
Identity = 251/317 (79.18%), Postives = 282/317 (88.96%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLAFR 951
            S+EHIMRDVK GWLIRY+H+NGAS FFIVVYAHIFRGLY+GS+MEPRQQLWWSG  IY+LMMATAFIGYVLPWGQMSFWGATVITSLFSI P +G+EVVMW+WGGFTVGNPTLNRF+SLHY LPF+ISGLVF HLGLLHK+GSNNPLG +T+I N++FYPY+Y KDLV+ F LL +LSI++FYFPN+LGDPDNYLEADPYGTPAHIVPEWYFLPFYAILR IPNKVGG +TM GAI +IFLYP+LN S LRS NFRPIY+V FWLF+ DF+LLAWSGTTPVDDYF +IG +VS+ YF FF  G L VG LEK   FR
Sbjct:   64 SIEHIMRDVKGGWLIRYIHSNGASLFFIVVYAHIFRGLYFGSFMEPRQQLWWSGGVIYILMMATAFIGYVLPWGQMSFWGATVITSLFSILPSVGREVVMWIWGGFTVGNPTLNRFYSLHYFLPFLISGLVFFHLGLLHKEGSNNPLGFRTRIGNLSFYPYLYAKDLVSLFILLSLLSIIVFYFPNTLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRVIPNKVGGILTMAGAIGVIFLYPVLNISKLRSGNFRPIYSVGFWLFLCDFFLLAWSGTTPVDDYFIIIGVIVSLSYFLFFFVGSLVVGFLEKEFLFR 380

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: Q2TUA7_DICDH (Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID=Q2TUA7_DICDH)

HSP 1 Score: 524 bits (1349), Expect = 5.040e-185
Identity = 240/315 (76.19%), Postives = 277/315 (87.94%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLA 945
            S+EHIMRDV +GWLIRY+HANGASFFFIVVYAHIFRGLYYGS+MEPRQ LWWSGA IYVLMMATAFIGYVLPWGQMSFWG TVIT+LF++ P IGK++VMW+WGG+TVGNPTLNRFFSLHY+LPF+I+GLVFVHLGLLHKDGSNNPLG+KT++ANVNFYPY YVKDLV FF LL V+S+ IFY+PN LG PDNY+EADPYGTPAHIVPEWYFLPFYAILR IPNKVGG + MGGAI+ +F+YPLLNTS++RS NFRP+YA+ FW+FV +F LLAWSGTTPVDDY+   G   S       + GG+F+G +E  L+
Sbjct:   64 SIEHIMRDVDNGWLIRYLHANGASFFFIVVYAHIFRGLYYGSFMEPRQSLWWSGAIIYVLMMATAFIGYVLPWGQMSFWGVTVITNLFTVIPVIGKDIVMWIWGGYTVGNPTLNRFFSLHYVLPFLIAGLVFVHLGLLHKDGSNNPLGVKTRLANVNFYPYFYVKDLVGFFVLLSVMSVFIFYYPNMLGHPDNYIEADPYGTPAHIVPEWYFLPFYAILRIIPNKVGGILAMGGAILALFIYPLLNTSLIRSGNFRPLYALAFWVFVGNFVLLAWSGTTPVDDYYLPFGIFASSYXXXXXIAGGIFIGWIENYLS 378

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: A0A7S6UA51_9STRA (Cytochrome b n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA51_9STRA)

HSP 1 Score: 463 bits (1191), Expect = 6.040e-161
Identity = 217/316 (68.67%), Postives = 253/316 (80.06%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLAF 948
            S+EHIMRDV +GWL+RY+HANGASFFFIVVY HIFRGLYYGSY+EPRQ+LW SG  I++LMMATAF+GYVLPWGQMSFWGATVIT+LFS  P  G  +V WLWGGF+VGNPTLNRFFSLHYL+PF+I+GLVFVHL LLHKDGS NPLG  +  +++ FYPY YVKDL+ FF LL  LS+ +F++PNSLG PDNY+ ADP  TPAHIVPEWYFLPFYAILR IP+K+GG + MGGAIVI+   P  NTS+LRS NFRPIY   FWL VADF LL W G  PVDD +  +G   +  YF FF+ G   +G LE+ L F
Sbjct:   66 SLEHIMRDVNNGWLVRYIHANGASFFFIVVYCHIFRGLYYGSYIEPRQELWCSGVIIFLLMMATAFMGYVLPWGQMSFWGATVITNLFSAIPVAGDAIVQWLWGGFSVGNPTLNRFFSLHYLMPFVIAGLVFVHLALLHKDGSGNPLGANSSFSSIPFYPYFYVKDLLGFFLLLTSLSVFVFFWPNSLGHPDNYIPADPLVTPAHIVPEWYFLPFYAILRSIPDKLGGVLGMGGAIVILLAIPFFNTSVLRSGNFRPIYLFGFWLIVADFLLLGWVGQKPVDDPYVSLGQYATFFYFLFFVLGIFAIGLLERWLLF 381

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: A0A8A6W2M9_9STRA (Cytochrome b n=1 Tax=Coscinodiscus granii TaxID=265552 RepID=A0A8A6W2M9_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 5.450e-155
Identity = 203/315 (64.44%), Postives = 250/315 (79.37%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLA 945
            SVEHIMRDV +GWLIRYMHANGAS FFIVVY HIFRGLYYGSYM PR+ LW SG  +++LMMATAF+GYVLPWGQMSFWGATVITSL +  P +G+ +  WLWGGFTV N TLNRFFSLH+LLPF+I+G+  +H+ LLHK+GSNNPLGI + +  ++FYPY ++KDL +FF  +   SI IFYFPN+LG PDNY+ ADP  TPAHIVPEWYFLPFYAILR IPNK+GG   MGG+++I+FL P +NTS +RS  FRPI+ + +WL VADF +L W G  PV D + ++G + ++ YF FFLF   F+G +E +LA
Sbjct:   91 SVEHIMRDVNNGWLIRYMHANGASMFFIVVYCHIFRGLYYGSYMAPRELLWCSGVLLFILMMATAFMGYVLPWGQMSFWGATVITSLMTAIPLVGEAITQWLWGGFTVSNATLNRFFSLHFLLPFLIAGVTIIHISLLHKEGSNNPLGIDSNVDKISFYPYFFIKDLFSFFIFIAFFSIFIFYFPNALGHPDNYIPADPMQTPAHIVPEWYFLPFYAILRSIPNKLGGVAGMGGSLIILFLIPFINTSEIRSTTFRPIFKIFYWLLVADFLILGWVGQKPVADMYIIVGQLATVFYFLFFLFLIPFIGIMESSLA 405

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BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Match: A0A7T8JK14_9STRA (Cytochrome b n=1 Tax=Coscinodiscus wailesii TaxID=671091 RepID=A0A7T8JK14_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 4.760e-154
Identity = 204/315 (64.76%), Postives = 247/315 (78.41%), Query Frame = 1

Query:    1 SVEHIMRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGAAIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGGFTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIANVNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANFRPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGLFVGRLEKTLA 945
            SVEHIMRDV +GWLIRYMHANGAS FFIVVY HIFRGLYYGSYM PRQ LW SG  I++LMM TAF+GYVLPWGQMSFWGATVITSL S  P +G+ +  WLWGGFTV N TLNRFFSLH++LPF+I+ LV +HL LLHKDGSNNPLG+ + +  ++FYPY +VKDL +FF  LF   IVIFY+PN+LG PDNY+ ADP  TP HIVPEWYFLPFYAILR IP+K+GG + MGG+++I+F  P +NTS +RS  FRP++ + +WL VADF +L W G  PV D + ++G + +I YF FFLF    +G +E  LA
Sbjct:   92 SVEHIMRDVNNGWLIRYMHANGASMFFIVVYCHIFRGLYYGSYMAPRQLLWCSGVLIFILMMGTAFMGYVLPWGQMSFWGATVITSLVSAIPLVGQPITQWLWGGFTVSNATLNRFFSLHFVLPFVIAALVIIHLALLHKDGSNNPLGVDSSVDKISFYPYFFVKDLFSFFLFLFGFCIVIFYYPNALGHPDNYIPADPMQTPPHIVPEWYFLPFYAILRSIPSKLGGVIAMGGSLIILFFIPFINTSEVRSTTFRPLFKIFYWLLVADFLILGWVGQKPVKDTYILVGQIATIFYFLFFLFLIPVIGNIEYKLA 406

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig59937.13655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
E6ZES8_ECTSI	3.160e-225	95.92	Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
D0IPB5_SACJA	1.710e-219	92.48	Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
A0A0A7LKY8_SACLA	2.580e-214	91.22	Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
A0A8F0FCD4_9PHAE	5.790e-211	89.34	Cytochrome b n=1 Tax=Laminaria ephemera TaxID=3093...	[more]
A0A0U1WNN6_SARFS	1.440e-204	84.01	Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A...	[more]
A0A8E8PEC1_9PHAE	2.910e-191	79.18	Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=224924...	[more]
Q2TUA7_DICDH	5.040e-185	76.19	Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID...	[more]
A0A7S6UA51_9STRA	6.040e-161	68.67	Cytochrome b n=1 Tax=Schizocladia ischiensis TaxID...	[more]
A0A8A6W2M9_9STRA	5.450e-155	64.44	Cytochrome b n=1 Tax=Coscinodiscus granii TaxID=26...	[more]
A0A7T8JK14_9STRA	4.760e-154	64.76	Cytochrome b n=1 Tax=Coscinodiscus wailesii TaxID=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig59937	contig	H-paniculata_contig59937:3..962 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Viridiplantae
Seed ortholog score	390.2
Seed ortholog evalue	9.2e-106
Seed eggNOG ortholog	3075.A0A087S9Z1
Preferred name	cob
KEGG ko	ko:K00412
KEGG Pathway	ko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016
KEGG Module	M00151,M00152
Hectar predicted targeting category	signal anchor
EggNOG free text desc.	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis
EggNOG OGs	34GP0@3041,37PDF@33090,COG1290@1,KOG4663@2759
COG Functional cat.	C
Best tax level	Chlorophyta
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko03029
Exons	1
Model size	960
Cds size	945
Stop	0
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930662.483847-CDS-H-paniculata_contig59937:2..947	1622930662.483847-CDS-H-paniculata_contig59937:2..947	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig59937 3..947 -
1691481394.8847547-CDS-H-paniculata_contig59937:2..947	1691481394.8847547-CDS-H-paniculata_contig59937:2..947	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig59937 3..947 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930662.4983895-UTR-H-paniculata_contig59937:947..962	1622930662.4983895-UTR-H-paniculata_contig59937:947..962	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig59937 948..962 -
1691481394.8991199-UTR-H-paniculata_contig59937:947..962	1691481394.8991199-UTR-H-paniculata_contig59937:947..962	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig59937 948..962 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig59937.13655.1	prot_H-paniculata_contig59937.13655.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig59937 3..947 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig59937:3..962-
coding sequence from alignment at H-paniculata_contig59937:3..962-

protein sequence of mRNA_H-paniculata_contig59937.13655.1

>prot_H-paniculata_contig59937.13655.1 ID=prot_H-paniculata_contig59937.13655.1|Name=mRNA_H-paniculata_contig59937.13655.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=315bp
MRDVKSGWLIRYMHANGASFFFIVVYAHIFRGLYYGSYMEPRQQLWWSGA
AIYVLMMATAFIGYVLPWGQMSFWGATVITSLFSIFPFIGKEVVMWLWGG
FTVGNPTLNRFFSLHYLLPFIISGLVFVHLGLLHKDGSNNPLGIKTKIAN
VNFYPYMYVKDLVAFFALLFVLSIVIFYFPNSLGDPDNYLEADPYGTPAH
IVPEWYFLPFYAILRGIPNKVGGTVTMGGAIVIIFLYPLLNTSILRSANF
RPIYAVVFWLFVADFYLLAWSGTTPVDDYFKVIGAVVSIGYFAFFLFGGL
FVGRLEKTLAFRALV

mRNA from alignment at H-paniculata_contig59937:3..962-

Legend: UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig59937.13655.1 ID=mRNA_H-paniculata_contig59937.13655.1|Name=mRNA_H-paniculata_contig59937.13655.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=960bp|location=Sequence derived from alignment at H-paniculata_contig59937:3..962- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTGTAGAGCATATTATGCGTGACGTTAAAAGTGGGTGGTTAATTCGTTA
TATGCATGCTAACGGGGCTTCATTTTTTTTTATTGTTGTTTATGCACATA
TCTTTAGAGGTCTCTATTATGGTTCATATATGGAGCCTCGTCAGCAACTT
TGGTGGTCAGGTGCCGCTATTTATGTTTTAATGATGGCTACTGCGTTTAT
TGGGTATGTGTTGCCTTGGGGTCAAATGAGCTTTTGGGGGGCTACTGTTA
TTACAAGTTTATTTTCTATTTTTCCTTTTATAGGTAAAGAAGTAGTTATG
TGGCTGTGGGGGGGATTTACAGTAGGTAATCCAACACTAAATCGTTTTTT
TAGTCTACATTATTTATTACCCTTTATAATATCAGGTTTAGTTTTTGTTC
ATTTAGGTTTATTGCACAAAGATGGATCTAATAATCCTTTAGGTATAAAA
ACTAAAATAGCCAATGTTAACTTTTACCCTTATATGTACGTAAAAGATTT
AGTGGCGTTTTTTGCACTTTTGTTTGTACTTTCGATTGTCATTTTTTATT
TCCCTAATAGCTTAGGTGATCCAGATAATTATTTAGAAGCAGATCCTTAT
GGTACACCTGCTCATATTGTCCCTGAATGGTATTTTTTACCATTTTATGC
CATTTTAAGAGGAATTCCTAATAAAGTGGGTGGGACTGTAACTATGGGTG
GAGCTATTGTTATTATATTTTTATACCCGCTTTTAAATACTTCCATACTA
CGTAGTGCTAATTTTAGACCTATTTATGCTGTAGTCTTTTGGCTTTTTGT
AGCTGACTTTTATTTGCTGGCTTGGTCAGGTACTACTCCAGTTGACGATT
ATTTTAAAGTAATAGGTGCCGTTGTATCTATTGGTTATTTTGCTTTTTTT
TTATTCGGGGGGCTATTTGTAGGTAGGTTAGAAAAAACTCTTGCTTTTCG
AGCATTAGTT

Coding sequence (CDS) from alignment at H-paniculata_contig59937:3..962-

>mRNA_H-paniculata_contig59937.13655.1 ID=mRNA_H-paniculata_contig59937.13655.1|Name=mRNA_H-paniculata_contig59937.13655.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1890bp|location=Sequence derived from alignment at H-paniculata_contig59937:3..962- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGTGACGTTAAAAGTGGGTGGTTAATTCGTTATATGCATGCTAACGG
GGCTTCATTTTTTTTTATTGTTGTTTATGCACATATCTTTAGAGGTCTCT
ATTATGGTTCATATATGGAGCCTCGTCAGCAACTTTGGTGGTCAGGTGCC
GCTATTTATGTTTTAATGATGGCTACTGCGTTTATTGGGTATGTGTTGCC
TTGGGGTCAAATGAGCTTTTGGGGGGCTACTGTTATTACAAGTTTATTTT
CTATTTTTCCTTTTATAGGTAAAGAAGTAGTTATGTGGCTGTGGGGGGGA
TTTACAGTAGGTAATCCAACACTAAATCGTTTTTTTAGTCTACATTATTT
ATTACCCTTTATAATATCAGGTTTAGTTTTTGTTCATTTAGGTTTATTGC
ACAAAGATGGATCTAATAATCCTTTAGGTATAAAAACTAAAATAGCCAAT
GTTAACTTTTACCCTTATATGTACGTAAAAGATTTAGTGGCGTTTTTTGC
ACTTTTGTTTGTACTTTCGATTGTCATTTTTTATTTCCCTAATAGCTTAG
GTGATCCAGATAATTATTTAGAAGCAGATCCTTATGGTACACCTGCTCAT
ATTGTCCCTGAATGGTATTTTTTACCATTTTATGCCATTTTAAGAGGAAT
TCCTAATAAAGTGGGTGGGACTGTAACTATGGGTGGAGCTATTGTTATTA
TATTTTTATACCCGCTTTTAAATACTTCCATACTACGTAGTGCTAATTTT
AGACCTATTTATGCTGTAGTCTTTTGGCTTTTTGTAGCTGACTTTTATTT
GCTGGCTTGGTCAGGTACTACTCCAGTTGACGATTATTTTAAAGTAATAG
GTGCCGTTGTATCTATTGGTTATTTTGCTTTTTTTTTATTCGGGGGGCTA
TTTGTAGGTAGGTTAGAAAAAACTCTTGCTTTTCGAGCATTAGTTATGCG
TGACGTTAAAAGTGGGTGGTTAATTCGTTATATGCATGCTAACGGGGCTT
CATTTTTTTTTATTGTTGTTTATGCACATATCTTTAGAGGTCTCTATTAT
GGTTCATATATGGAGCCTCGTCAGCAACTTTGGTGGTCAGGTGCCGCTAT
TTATGTTTTAATGATGGCTACTGCGTTTATTGGGTATGTGTTGCCTTGGG
GTCAAATGAGCTTTTGGGGGGCTACTGTTATTACAAGTTTATTTTCTATT
TTTCCTTTTATAGGTAAAGAAGTAGTTATGTGGCTGTGGGGGGGATTTAC
AGTAGGTAATCCAACACTAAATCGTTTTTTTAGTCTACATTATTTATTAC
CCTTTATAATATCAGGTTTAGTTTTTGTTCATTTAGGTTTATTGCACAAA
GATGGATCTAATAATCCTTTAGGTATAAAAACTAAAATAGCCAATGTTAA
CTTTTACCCTTATATGTACGTAAAAGATTTAGTGGCGTTTTTTGCACTTT
TGTTTGTACTTTCGATTGTCATTTTTTATTTCCCTAATAGCTTAGGTGAT
CCAGATAATTATTTAGAAGCAGATCCTTATGGTACACCTGCTCATATTGT
CCCTGAATGGTATTTTTTACCATTTTATGCCATTTTAAGAGGAATTCCTA
ATAAAGTGGGTGGGACTGTAACTATGGGTGGAGCTATTGTTATTATATTT
TTATACCCGCTTTTAAATACTTCCATACTACGTAGTGCTAATTTTAGACC
TATTTATGCTGTAGTCTTTTGGCTTTTTGTAGCTGACTTTTATTTGCTGG
CTTGGTCAGGTACTACTCCAGTTGACGATTATTTTAAAGTAATAGGTGCC
GTTGTATCTATTGGTTATTTTGCTTTTTTTTTATTCGGGGGGCTATTTGT
AGGTAGGTTAGAAAAAACTCTTGCTTTTCGAGCATTAGTT