mRNA_H-paniculata_contig598.13632.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: A0A6H5L010_9PHAE (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L010_9PHAE) HSP 1 Score: 402 bits (1032), Expect = 7.790e-124 Identity = 313/771 (40.60%), Postives = 369/771 (47.86%), Query Frame = 1
Query: 481 PEASRSLTGAFLALRDSCASCPANQNLLRGTRLPEAA--LGFAVDQAYFACGAPTPNVVATTKAAASDPERTVEVVGGARLAVRAALQFVCNWCVGNEANQASLWDRSFPRGLMELVNGLKTDRRLLSLAVALIHNCCVA----------------------------------KGRGRDRLCRLSADRAFCCLLMKVVPFDPNPCTPESTAPESAFINRDNSLSSDDPAAEWLYLLFCRFVQEHLLSDFYDAIGVRAGGRSTGSNRR--------DTPEMENGEVDEGCTRGRKREGDETVKVLSRNGDAAPFEEKLGGNNRTASRREKSEATWTLEAGEMDFFFPVTPEQLIMLNFTEITAG------DKAVTGSERPTQGQRQTCYSLYSWLIELLAAMPLNQSLL----------------------HACDRETSITPRTKV--EGHGQGGGGDLETAATRRRMREELRSAVLRALATLLARCDVGTRRAAAGYRAPDRVIKSSR-------------DQNGTVFTESG----------LVSGAFVGGADHASVYGDYVGIDFGRSQELSLDS-RSSVPDPPQPPKAATERGRGPG-RGLVPLCLELLSWCGSAAEPNAKIVTIETGVECDNVATEA-------TGRRG-----------VPTGRKAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQGCSPGMEQGLADMGLEGRLDDQGKVRLDP 2442
P A+R+L AF LR++CA CP N + LR T L EAA L FAVDQA FAC A T + A+T S+ T +V RLAVRA LQF N+C G+E ++ SLW FPRGLMELVN LKTDR LLSLAVALIHNCC++ + RGR+RL LSAD+AFC A S R DDPAAEWLYLLFC FVQE L YD +G+RAG R RR D+ + +E G G +V+ +S G E GG R E PVTPEQLI+LN E+ G D+ VTG E P+ QRQ C +L SWL LL+AMPL+QSLL ++P + E G G D ET RR MREE RSA LR LA LLA C TR+ A Q T+ G + A VGGA G + R + D P AT P RGLVPLCL LL CG AAEPN + + + + A+ A T R G VP GRK ELLKVIGN CFRC SQD+VRE G LPL+LNHCAVD NPLLR EYALLAVRNLCEGNP NQA IA+L+PQGC+PGM + LADMGLEG ++ +GK + P
Sbjct: 89 PAAARALRRAFTFLRNACAGCPGNNHALRHTGLAEAASALQFAVDQALFAC-ATTSHPAASTAECQSEVGGTSDV----RLAVRAGLQFAYNYCAGSEESKVSLWAAWFPRGLMELVNELKTDRGLLSLAVALIHNCCISPRPREPGEDDGSDRGSNRDNGAGEAGXEEADGGERSRGRERLALLSADKAFCXXXXXXXXXXXXXXXXXVGASGSHSRERSGGEPDDDPAAEWLYLLFCCFVQERLCRRVYDNVGIRAGKRRKRPRRRGGCGAVVVDSARVAQSGGEEDGAAG----GSGSVRAISGVGRGEE-EWGEGGKGRVD---EXXXXXXXXXXXXXXXXXPVTPEQLIVLNLAELATGKCGWNSDEVVTGGECPSPRQRQACSALASWLTGLLSAMPLSQSLLPRTGTAQPXXXXXXXXXXXXXXXXXXXXKPLSPSSSAGDEDRGDGVAADAETERVRRSMREEARSAALRGLAALLAGCSDETRQQIAXXXXXXXXXXXXXXXXXXXXXXXXXPQQAATLGVALGEAEETTRSAAKATAAGVGGASEGE------GCEATRVPRVREDGGXXXXXXXXXTPTTATPVVLHPEPRGLVPLCLRLLHGCGGAAEPNPSASSGQFSRKKGSTASAAVAAGARDTARSGSHHRGALSGGAVPAGRKVELLKVIGNACFRCRRSQDLVREEGGLPLVLNHCAVDETNPLLR-EYALLAVRNLCEGNPANQASIASLQPQGCTPGMVESLADMGLEGSVNAEGKFTVGP 839
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: D8LJX9_ECTSI (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX9_ECTSI) HSP 1 Score: 319 bits (817), Expect = 7.380e-95 Identity = 259/723 (35.82%), Postives = 307/723 (42.46%), Query Frame = 1
Query: 589 ALGFAVDQAYFACGAPTPNVVATTKAAASDPERTVEVVGGA---RLAVRAALQFVCNWCVGNEANQASLWDRSFPRGLMELVNGLKTDRRLLSLAVALIHNCCVA----------------------------------KGRGRDRLCRLSADRAFCCLLMKVVPFDPNPCTPESTAPESAFINRDNSLSSDDPAAEWLYLLFCRFVQEHLLSDFYDAIGVRAGGRSTGSNRRDTPEMENGEVDEGCTRGRKREGDETVKVLSRNGDAAPFEEKLGGNNRTASRREKSEATWTLEAGEMDFFFPVTPEQLIMLNFTEITAGDKAVTGSERPTQGQRQTCYSLYSWLIELLAAMPLNQSLLHACDRETSITPRTKVE------------------GHGQGGGG---DLETAATRRRMREELRSAVLRALATLLARCDVGTRRAAAGYRAPDRV---------------------------IKSSRDQNGTVFTESGLVSGAFVGGADHASVYGDYVGIDFGRSQELSLDSRSSVPD--PPQPPKAATERGRGPGRGLVPLCLELLSWCGSAAEPN------------AKIVTIETGVECDNVATEATGRRG------VPTGRKAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQGCSPGMEQGLADMGLEGRLDDQGKVRLDP 2442
AL FAVDQA FAC ATT A+ VG A RLAVRA LQF N+C G+E ++ASLW FPRGLMELVN LKTDR LLSLAVAL+HNCC++ + RGR+RL LSAD+AFCC AAEWLYLLFC FVQE L YD +G+RAG R+ +R + +A D+ VTG ERP QRQ C +L +WL LL+A+PL+QSLL T+ P GH + G G D ET RR MREE RSA LRALA LLA C TR+ + S + T + V+ A GGA G + R +S D P P A + GLVPLCL LL CG AAEPN + + A + RG VP GRK ELLKVIGN CFRC SQD+VRE G LPL+LNHC VD NPLLR EYALLA+RNLCEGN NQA I++L+PQGC+PGME+ LADMGLEG ++ +GK + P
Sbjct: 3 ALQFAVDQAPFAC--------ATTSHPAARTAECQSEVGDASDVRLAVRAGLQFAYNYCAGSEESKASLWAAWFPRGLMELVNELKTDRGLLSLAVALVHNCCISPPPREPREDDGSPRESNRDNGTGEAXXXXXXXXERSRGRERLDLLSADKAFCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEWLYLLFCCFVQERLCRRVYDNVGIRAGKRT--------------------------------------------------------KRPRRQA-------------------------------DEVVTGGERPCPRQRQACGALAAWLTGLLSAIPLSQSLLPRTG--TAQPPXXXXXXXXXXXXXXXXXXXXXSAGHEERGDGVATDAETERVRRSMREEARSAALRALAALLAGCSDETRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGVASGEAEETT--RSAAKVTAAGSGGASEGE------GCEVARVPRVSEDGGGGRGGSLPLTPTTATPVIAQPEPLGLVPLCLRLLHGCGGAAEPNPAASSGQFSRKEGSTASAAVATGAGDTAPNGSHHRGELPDGAVPAGRKVELLKVIGNACFRCRRSQDLVREEGGLPLVLNHCKVDEANPLLR-EYALLALRNLCEGNAANQASISSLQPQGCTPGMEEALADMGLEGSVNAEGKFAVGP 619
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: A0A835ZAD7_9STRA (Spinocerebellar ataxia type 10 protein domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD7_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.150e-21 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 2119 GVPTGRKAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQG 2358
GVP GRKA+L+KVI N C C +QD VR G +PL+L+HC +D +P LR E+ ++AVRNLCEGN +NQA +A LE QG
Sbjct: 22 GVPHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLR-EWGIVAVRNLCEGNAENQACVAKLEKQG 100
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: A0A0L0HAC6_SPIPD (Copper transport protein 86 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HAC6_SPIPD) HSP 1 Score: 108 bits (270), Expect = 6.960e-21 Identity = 46/100 (46.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query: 2137 KAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQGCSPGMEQGLADMGLEGRLDDQGKVRL 2436
K++ +KV+ N C+ + QD +R +G +P+ILN C VD NP ++ E+A+LA+RNLC+GN +NQ L+A+L PQG +P EQ L + G++ ++DD G+VR+
Sbjct: 439 KSDTVKVLANLCYEAKEVQDEIRRIGGIPVILNECRVDDNNPYIK-EHAILAIRNLCDGNTENQDLVASLTPQGIAPESEQMLDEAGIQAKVDDSGRVRV 537
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: A0A3M6VRE6_9STRA (Atx10homo_assoc domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRE6_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.950e-20 Identity = 50/106 (47.17%), Postives = 70/106 (66.04%), Query Frame = 1
Query: 2119 GVPTGRKAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQGCSPGMEQGLADMGLEGRLDDQGKVRL 2436
G P G ++ L++VIGN CFR QD++R+ G LPL LNHC +D NPL+R E++L+A+RNLCEGN NQ+ I AL PQG + L + +++ GKV+L
Sbjct: 455 GEPLGYRSRLIRVIGNLCFRHTYHQDLIRDEGYLPLFLNHCNIDETNPLVR-EWSLVALRNLCEGNEANQSFINALRPQGMDAASDTALEKAKVRVHIEEDGKVKL 559
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: A0A8K1CP50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP50_PYTOL) HSP 1 Score: 105 bits (262), Expect = 6.980e-20 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 2125 PTGRKAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQGCSPGMEQGLADMGLEGRLDDQGKVRL 2436
P G ++ +++V+GN C R E Q++VRE G LPL LNHC +D NPLLR E++L+A+RNLCEGN NQA I AL PQG L+++ +E L D GKVR+
Sbjct: 455 PFGYRSAIIRVVGNMCHRQESHQNLVREEGYLPLFLNHCNIDEPNPLLR-EWSLVALRNLCEGNEANQAYITALRPQGLDSS-NVNLSNVNVEASLSDDGKVRV 556
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: A0A662XYY0_9STRA (Atx10homo_assoc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYY0_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.240e-19 Identity = 49/104 (47.12%), Postives = 68/104 (65.38%), Query Frame = 1
Query: 2125 PTGRKAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQGCSPGMEQGLADMGLEGRLDDQGKVRL 2436
P G ++ L++V+GN FR QD+VR+ G LPL LNHC +D NPL+R E++L+A+RNLCEGN NQ+ I+AL PQG L + +DD GK++L
Sbjct: 415 PFGYRSGLIRVVGNLSFRHSAHQDLVRDEGYLPLFLNHCNIDETNPLIR-EWSLVALRNLCEGNEANQSYISALRPQGMDSASSVALEKAQMHAEVDDDGKIKL 517
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: A0A225VEV9_9STRA (Atx10homo_assoc domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VEV9_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.310e-19 Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 2119 GVPTGRKAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQGCSPGMEQGLADMGLEGRLDDQGKVRL 2436
G P G ++ L++VIGN FR QD+VRE G LPL LNHC +D NP++R E++L+A+RNLCEGN NQA I AL PQG L + + + GKVRL
Sbjct: 386 GEPFGYRSGLIRVIGNLSFRHTYHQDLVREEGYLPLFLNHCNIDETNPMIR-EWSLVALRNLCEGNEANQAYITALRPQGMDASSSAALDKTKMRADIGEDGKVRL 490
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: A0A1Y2C253_9FUNG (Copper transport protein 86 n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C253_9FUNG) HSP 1 Score: 102 bits (253), Expect = 1.020e-18 Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 2137 KAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQGCSPGMEQGLADMGLEGRLDDQGKVRLDPL 2445
K +KV+ N ++C+ QD VR G +P+ILNHC +D P ++ EYA+ A+RNLCEGN +NQ LI ++E G G +GLA G+ L D G+VR+ P+
Sbjct: 493 KGAAIKVLSNLSYKCKEGQDEVRRTGGIPVILNHCHIDDAQPFVK-EYAVFAIRNLCEGNLENQKLIESMEVIGLPEGQNEGLAAHGVRAGLSDDGRVRISPV 594
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Match: A0A2D4BF77_PYTIN (Atx10homo_assoc domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF77_PYTIN) HSP 1 Score: 99.8 bits (247), Expect = 1.140e-18 Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 2125 PTGRKAELLKVIGNTCFRCEVSQDMVRELGALPLILNHCAVDGGNPLLRREYALLAVRNLCEGNPQNQALIAALEPQGCSPGMEQGLADMGLEGRLDDQGKVRLDPLT 2448
P G ++ +++V+GN C+R QD+VRE G LPL LNHC VD NPLLR E++L+A+RNLCEGN NQ I AL PQG L + ++ +LD GK+++ T
Sbjct: 279 PFGYRSAIIRVVGNLCYRQTDHQDIVREKGFLPLFLNHCNVDEMNPLLR-EWSLVALRNLCEGNEANQQYITALRPQGIDK-TSVDLDGLNVDAKLDADGKLKVSRKT 384 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig598.13632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig598.13632.1 >prot_H-paniculata_contig598.13632.1 ID=prot_H-paniculata_contig598.13632.1|Name=mRNA_H-paniculata_contig598.13632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=779bp MDRRSSKSAPALGVEMRWLEMAATLAKAQHTRHLALQDKCILPQLIALVEback to top mRNA from alignment at H-paniculata_contig598:21881..27268- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig598.13632.1 ID=mRNA_H-paniculata_contig598.13632.1|Name=mRNA_H-paniculata_contig598.13632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5388bp|location=Sequence derived from alignment at H-paniculata_contig598:21881..27268- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig598:21881..27268- >mRNA_H-paniculata_contig598.13632.1 ID=mRNA_H-paniculata_contig598.13632.1|Name=mRNA_H-paniculata_contig598.13632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4674bp|location=Sequence derived from alignment at H-paniculata_contig598:21881..27268- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |