mRNA_H-paniculata_contig5969.13618.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: A0A6S7HIQ4_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HIQ4_PARCT) HSP 1 Score: 87.0 bits (214), Expect = 7.130e-19 Identity = 38/73 (52.05%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 7 TTLFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLRNLL 225
T ++EDN++AI++++ P +H RTKHI+ R+H IRE ++ GV+AL+YV T + +AD+LTK LS+ QF +LRN L
Sbjct: 213 TVIYEDNQAAISIAKNPVSHARTKHIDTRYHFIREELQSGVIALEYVPTSEMVADILTKPLSKSQFVKLRNAL 285
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: A0A7H4LDI7_WHEAT (Genome assembly, chromosome: II n=2 Tax=Triticinae TaxID=1648030 RepID=A0A7H4LDI7_WHEAT) HSP 1 Score: 88.6 bits (218), Expect = 8.900e-19 Identity = 40/72 (55.56%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 1 GSTTLFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLR 216
G+TT+F DNKSAI L + P H R+KHI+VR+H IR+ + EG + +K++ TGDQLAD+ TK L R +FQ+LR
Sbjct: 1216 GATTIFIDNKSAIQLCKNPVCHDRSKHIDVRFHFIRKCVEEGKIRVKHIATGDQLADIFTKSLGRTRFQQLR 1287
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: A0A0L6WME8_9AGAR (Copia protein n=2 Tax=Termitomyces sp. J132 TaxID=1306850 RepID=A0A0L6WME8_9AGAR) HSP 1 Score: 81.6 bits (200), Expect = 1.800e-18 Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 7 TTLFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLRNLL 225
TT+F DNK+AI+LS P AH R KH ++++H IRE G +A+KYV T D +ADM TK L + F RLR++L
Sbjct: 29 TTMFCDNKAAISLSEDPTAHARVKHFDIKYHFIREHAHNGEIAIKYVNTRDNIADMFTKPLPKPLFVRLRHML 101
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: A0A2K3K827_TRIPR (Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K827_TRIPR) HSP 1 Score: 80.1 bits (196), Expect = 4.890e-18 Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 13 LFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLR 216
L+ DN SAIN+S+ P H RTKHI++R H IR+ + EGV+ L+++ T +QLAD+ TK L VQF++LR
Sbjct: 11 LYCDNLSAINISKNPIQHSRTKHIDIRHHFIRDLVEEGVVKLEHIATEEQLADIFTKALDAVQFEKLR 78
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: UPI001E1CA6F9 (LOW QUALITY PROTEIN: uncharacterized protein LOC109774810 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001E1CA6F9) HSP 1 Score: 85.5 bits (210), Expect = 1.080e-17 Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 7 TTLFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLR 216
T L DNKSAI L + P H RTKHIE R+H IRE +++G +A+ Y+ TG+QLAD++TK L RV+FQ LR
Sbjct: 1352 TPLLIDNKSAIQLCKNPVFHDRTKHIETRFHFIRECVQDGRIAVDYIHTGEQLADIMTKALPRVKFQELR 1421
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: UPI001E1BA65C (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA65C) HSP 1 Score: 82.0 bits (201), Expect = 1.450e-17 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 13 LFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLR 216
LF DN+SAI + R P H RTKHI+VR+H IRE +GV+ KYV T +QLAD+LTK L+ +FQRLR
Sbjct: 130 LFMDNQSAIRIIRNPELHQRTKHIDVRYHFIRELQEQGVIDAKYVNTNEQLADILTKPLAAPRFQRLR 197
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: A0A7D9LAD0_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LAD0_PARCT) HSP 1 Score: 81.6 bits (200), Expect = 1.540e-17 Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 7 TTLFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLR 216
TT++EDN+ AI +SR P H RTKHI++++H IRE ++G + LKY T + LAD+LTK LS+ QF+ LR
Sbjct: 113 TTIYEDNQGAIAMSRNPVLHKRTKHIDIKYHFIREKTQDGTIELKYCPTNEMLADILTKPLSKGQFEYLR 182
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: UPI001ABC4BCD (secreted RxLR effector protein 161-like n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001ABC4BCD) HSP 1 Score: 82.8 bits (203), Expect = 1.550e-17 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 1 GSTTLFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLR 216
G+ T+F DNKSAI L + P H R+KHI+VR+H IR I E + ++++ TGDQLADM TK L R +FQ LR
Sbjct: 170 GAVTIFVDNKSAIQLCKNPVFHDRSKHIDVRFHFIRNCIEEEKIKVEHIPTGDQLADMFTKSLGRTRFQELR 241
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: A0A5E8B7G3_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8B7G3_9ASCO) HSP 1 Score: 83.2 bits (204), Expect = 1.570e-17 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 10 TLFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLRNLL 225
T+FEDN+ I L++ P H RTKHI+VR+H +R +IR GV+ L+Y+ T LADM TK L RV+F+ LR LL
Sbjct: 161 TMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGLL 232
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Match: A0A453SJJ3_AEGTS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453SJJ3_AEGTS) HSP 1 Score: 84.0 bits (206), Expect = 1.610e-17 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 7 TTLFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQTGDQLADMLTKGLSRVQFQRLR 216
T L DNKSAI L + P H RTKHIE R+H IRE +++G + + Y+ TG+QLAD++TK L RV+FQ LR
Sbjct: 251 TPLLIDNKSAIQLCKNPVFHDRTKHIETRFHFIRECVQDGRIVVDYIHTGEQLADIMTKALPRVKFQELR 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5969.13618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5969.13618.1 >prot_H-paniculata_contig5969.13618.1 ID=prot_H-paniculata_contig5969.13618.1|Name=mRNA_H-paniculata_contig5969.13618.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp GSTTLFEDNKSAINLSRGPGAHCRTKHIEVRWHGIREWIREGVLALKYVQback to top mRNA from alignment at H-paniculata_contig5969:327..557+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5969.13618.1 ID=mRNA_H-paniculata_contig5969.13618.1|Name=mRNA_H-paniculata_contig5969.13618.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=231bp|location=Sequence derived from alignment at H-paniculata_contig5969:327..557+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5969:327..557+ >mRNA_H-paniculata_contig5969.13618.1 ID=mRNA_H-paniculata_contig5969.13618.1|Name=mRNA_H-paniculata_contig5969.13618.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig5969:327..557+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |