mRNA_H-paniculata_contig58169.13421.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig58169.13421.1
Unique Name	mRNA_H-paniculata_contig58169.13421.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: D1J7A3_ECTSI (Photosystem I P700 chlorophyll a apoprotein A1 n=262 Tax=Stramenopiles TaxID=33634 RepID=D1J7A3_ECTSI)

HSP 1 Score: 691 bits (1783), Expect = 4.090e-245
Identity = 325/339 (95.87%), Postives = 332/339 (97.94%), Query Frame = 1

Query:    1 KVKVLVDRNNISPTSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            KVKVLVDRN ++ TSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFDSQT SLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCL+WSGHQIHIALPINKLLDAGVASQEIPLPYEF+INRELIGQLYPSFKKGLVPFFS  W EYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSM++ILEAHKGPFTG GHTGLYEILT+SW
Sbjct:    9 KVKVLVDRNTVNTTSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFDSQTNSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLAWSGHQIHIALPINKLLDAGVASQEIPLPYEFIINRELIGQLYPSFKKGLVPFFSFNWSEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMREILEAHKGPFTGAGHTGLYEILTTSW 347

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BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: B2XT52_HETAK (Photosystem I P700 chlorophyll a apoprotein A1 n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT52_HETAK)

HSP 1 Score: 647 bits (1669), Expect = 8.360e-228
Identity = 300/339 (88.50%), Postives = 320/339 (94.40%), Query Frame = 1

Query:    1 KVKVLVDRNNISPTSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            KV+V+VD+N +  TSFEKWAKPGHFSRTL+KGPKTTTWIWNLHADAHDFD  + SLE+VSRKIFSAHFGQL+IIFLWISGMHFHGAYFSNYLAWLNNP  IKPSAQVVWP+VGQEILN DVGGNFQGVQITSGFFQ+WRAEGITSE+ELYWTAIGGL+MS LMLF GWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVA QEIPLP+EFL+NRELIGQLYPSF KGL PFFS  WGEYSDFLTFKGGLNP+TGGLWLSD AHHHLALAVLFI+AGHMY+TN+GIGHSMKDILEAHKGPFTG GH GLYE+LT+SW
Sbjct:   10 KVRVIVDKNVVE-TSFEKWAKPGHFSRTLAKGPKTTTWIWNLHADAHDFDGNSNSLEDVSRKIFSAHFGQLAIIFLWISGMHFHGAYFSNYLAWLNNPTGIKPSAQVVWPLVGQEILNADVGGNFQGVQITSGFFQIWRAEGITSEVELYWTAIGGLVMSSLMLFAGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVAPQEIPLPHEFLVNRELIGQLYPSFNKGLQPFFSGNWGEYSDFLTFKGGLNPITGGLWLSDVAHHHLALAVLFIIAGHMYKTNFGIGHSMKDILEAHKGPFTGEGHKGLYEVLTTSW 347

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BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: A0A514CPQ8_9STRA (Photosystem I P700 chlorophyll a apoprotein A1 n=5 Tax=cellular organisms TaxID=131567 RepID=A0A514CPQ8_9STRA)

HSP 1 Score: 641 bits (1654), Expect = 1.630e-225
Identity = 293/339 (86.43%), Postives = 320/339 (94.40%), Query Frame = 1

Query:    1 KVKVLVDRNNISPTSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            KV+VLVDR+ +S T+FEKWAKPGHFSRTL+KGP+TTTWIWNLHADAHDFDSQT SLE+VSRKIFSAHFGQLS+IFLWISGMHFHGAYFSNY AWL+NP +IKPSAQVVWPIVGQEILNGDVGGNFQGVQ+TSGFFQ+WRAEG+TSE+ELYWTA+GGL+MS LM+F GWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSW+GHQIH+ALPINKLLDAG+A QEIPLP+EF++NR+L+ QLYPSF KGL PFF   W EYSDFLTFKGGLNPVTGGLWLSD AHHHLALAVLFI AGHMYRTNWGIGHSMK+ILEAHKGPFTG GH GLYEILT+SW
Sbjct:   12 KVRVLVDRDVVS-TNFEKWAKPGHFSRTLAKGPRTTTWIWNLHADAHDFDSQTNSLEDVSRKIFSAHFGQLSLIFLWISGMHFHGAYFSNYSAWLSNPTAIKPSAQVVWPIVGQEILNGDVGGNFQGVQVTSGFFQIWRAEGVTSEVELYWTALGGLVMSALMMFAGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWAGHQIHVALPINKLLDAGIAPQEIPLPHEFIVNRDLMAQLYPSFSKGLAPFFGFNWVEYSDFLTFKGGLNPVTGGLWLSDVAHHHLALAVLFIFAGHMYRTNWGIGHSMKEILEAHKGPFTGEGHKGLYEILTTSW 349

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BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: C6KIP4_AURAN (Photosystem I P700 chlorophyll a apoprotein A1 n=13 Tax=Pelagophyceae TaxID=35675 RepID=C6KIP4_AURAN)

HSP 1 Score: 641 bits (1654), Expect = 1.630e-225
Identity = 297/339 (87.61%), Postives = 318/339 (93.81%), Query Frame = 1

Query:    1 KVKVLVDRNNISPTSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            KVKVLVDRN +  TSFEKWAKPGHFSRTL+KGPKTTTWIWNLHADAHDFDSQT SLE++SRKIFSAHFGQL+IIF W+SGMHFHGAYFSNY AWL NP S+KPS QVVWP+VGQEILN DVGGNFQGVQ+TSGFFQ+WRAEGITSEIELYWTAIGGLIMSGLM+F GWFHYHKAAPKLEWFQNAESM+NHHLS LLGLG LSWSGHQIHIALPINKLLDAG+A QEIPLP+EFL+NR+L+ QLYPSF+KGL PFFS  WGEYSDFLTFKGGLNPVTGGLWLSD AHHHLA+AVLFI AGHMYRTNWGIGHSMK+ILEAHKGPFTG GHTGLYEILT+SW
Sbjct:   12 KVKVLVDRNVVD-TSFEKWAKPGHFSRTLAKGPKTTTWIWNLHADAHDFDSQTNSLEDISRKIFSAHFGQLAIIFFWVSGMHFHGAYFSNYSAWLANPTSVKPSTQVVWPVVGQEILNADVGGNFQGVQVTSGFFQIWRAEGITSEIELYWTAIGGLIMSGLMIFAGWFHYHKAAPKLEWFQNAESMMNHHLSVLLGLGSLSWSGHQIHIALPINKLLDAGIAPQEIPLPHEFLVNRDLMAQLYPSFEKGLAPFFSGNWGEYSDFLTFKGGLNPVTGGLWLSDIAHHHLAIAVLFIFAGHMYRTNWGIGHSMKEILEAHKGPFTGEGHTGLYEILTTSW 349

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BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: B7T241_VAULI (Photosystem I P700 chlorophyll a apoprotein A1 n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T241_VAULI)

HSP 1 Score: 640 bits (1651), Expect = 4.190e-225
Identity = 297/339 (87.61%), Postives = 317/339 (93.51%), Query Frame = 1

Query:    1 KVKVLVDRNNISPTSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            KVK+LV+RN+   TSFEKWAKPGHFSRTL+KGPKTTTWIWNLHADAHDFD QT SLE++SRKIFSAHFGQL+IIFLW+SGMHFHGAYFSNYL WLNNP  +KPSAQ+VWPIVGQEILN DVGGNFQGVQITSGFFQLWRAEGITSEI+LYWTAIGGLIMSGLMLF GWFHYHKAAPKLEWFQN ESMLNHHLS LLGLGCLSWSGHQIHIALPINKLLDAGVA QEIPLP+EFLINRELI Q+YPSF KGLVPFF+  W EYSDFLTFKGG+NPVTGGLWL+D AHHHLALAVLF+ AGHMYRTNWGIGHSMK+ILE+HKGPFTG GH GLYEILT+SW
Sbjct:    9 KVKILVERNSTE-TSFEKWAKPGHFSRTLAKGPKTTTWIWNLHADAHDFDIQTNSLEDISRKIFSAHFGQLAIIFLWLSGMHFHGAYFSNYLGWLNNPTGVKPSAQIVWPIVGQEILNADVGGNFQGVQITSGFFQLWRAEGITSEIQLYWTAIGGLIMSGLMLFAGWFHYHKAAPKLEWFQNVESMLNHHLSVLLGLGCLSWSGHQIHIALPINKLLDAGVAPQEIPLPHEFLINRELIAQVYPSFSKGLVPFFNGNWSEYSDFLTFKGGVNPVTGGLWLTDIAHHHLALAVLFLFAGHMYRTNWGIGHSMKEILESHKGPFTGEGHAGLYEILTTSW 346

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BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: A0A514CPH9_9STRA (Photosystem I P700 chlorophyll a apoprotein A1 n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A514CPH9_9STRA)

HSP 1 Score: 640 bits (1651), Expect = 4.480e-225
Identity = 294/339 (86.73%), Postives = 317/339 (93.51%), Query Frame = 1

Query:    1 KVKVLVDRNNISPTSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            KVKVLVDRN +  T+FEKWAKPGHFSRTL+KGPKTTTWIWNLHADAHDFD+QT SLE++SRKIFSAHFGQLS+IFLWISGMHFHGAYFSNY AWL NP++IKPSAQVVWPIVGQEILNGD+GGNF GVQITSGFFQ+WRAEGITSE+ELYWTA+GGL MS LM+F GWFHYHKAAPKLEWFQNAESM+NHHL+GLLGLGCLSWSGHQIHIA PINKLLDAGV  QEIPLP+EFLINREL+ QLYPSF KGL PFF L W EYSDFLTFKGGLNPVTGGLWL+D AHHHLALAVLFIVAGHMYRTNWGIGHSM++ILEAHKGPFTG GH GLYE+LT+SW
Sbjct:   11 KVKVLVDRNVVD-TNFEKWAKPGHFSRTLAKGPKTTTWIWNLHADAHDFDNQTSSLEDISRKIFSAHFGQLSLIFLWISGMHFHGAYFSNYSAWLTNPLAIKPSAQVVWPIVGQEILNGDMGGNFSGVQITSGFFQIWRAEGITSEVELYWTALGGLFMSALMMFAGWFHYHKAAPKLEWFQNAESMMNHHLAGLLGLGCLSWSGHQIHIAAPINKLLDAGVTPQEIPLPHEFLINRELMAQLYPSFSKGLAPFFGLHWNEYSDFLTFKGGLNPVTGGLWLTDIAHHHLALAVLFIVAGHMYRTNWGIGHSMREILEAHKGPFTGEGHKGLYEVLTTSW 348

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BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: PSAA_GUITH (Photosystem I P700 chlorophyll a apoprotein A1 n=23 Tax=Cryptophyceae TaxID=3027 RepID=PSAA_GUITH)

HSP 1 Score: 637 bits (1643), Expect = 7.560e-224
Identity = 293/339 (86.43%), Postives = 317/339 (93.51%), Query Frame = 1

Query:    1 KVKVLVDRNNISPTSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            KV V+VDRN +S TSFEKW +PGHFSRTL+KGPKTTTWIWNLHADAHDFDS T SLE++SRKIFSAHFGQLSIIFLWISGMHFHGA FSNY AWL+NP ++KPSAQVVWPIVGQEILNGDVGG FQGVQ+TSGFFQ+WRAEGITSE+ELYW A+ GL+MSGLM+F GWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSW+GHQIH+ LPINKLLDAGVA QEIPLP+EFL+NR+L+ QLYPSF KGL+PFFSL W EYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMK+ILEAHKGPFTG GH GLYEIL +SW
Sbjct:   12 KVNVVVDRNPVS-TSFEKWGQPGHFSRTLAKGPKTTTWIWNLHADAHDFDSHTSSLEDISRKIFSAHFGQLSIIFLWISGMHFHGARFSNYSAWLSNPTTVKPSAQVVWPIVGQEILNGDVGGGFQGVQVTSGFFQIWRAEGITSEVELYWCAVAGLLMSGLMIFAGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWAGHQIHVGLPINKLLDAGVAPQEIPLPHEFLMNRDLMAQLYPSFNKGLIPFFSLNWSEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKEILEAHKGPFTGEGHKGLYEILITSW 349

[Close]

BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: A0A499U919_9PHAE (Photosystem I P700 apoprotein A1 (Fragment) n=2 Tax=Chordariaceae TaxID=66220 RepID=A0A499U919_9PHAE)

HSP 1 Score: 617 bits (1590), Expect = 7.710e-222
Identity = 293/298 (98.32%), Postives = 295/298 (98.99%), Query Frame = 1

Query:  124 LHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            LHADAHDFDSQT SLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFS QWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMK+ILEAHKGPFTG GHTGLYEILT+SW
Sbjct:    1 LHADAHDFDSQTNSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSFQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKEILEAHKGPFTGAGHTGLYEILTTSW 298

[Close]

BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: A0A8D5NJP7_9PHAE (Photosystem I P700 apoprotein A1 (Fragment) n=1 Tax=Dictyosiphon chordaria TaxID=1535351 RepID=A0A8D5NJP7_9PHAE)

HSP 1 Score: 616 bits (1588), Expect = 1.440e-221
Identity = 291/298 (97.65%), Postives = 295/298 (98.99%), Query Frame = 1

Query:  124 LHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            LHADAHDFDSQT SLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIH+ALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFS QWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFI+AGHMYRTNWGIGHSMK+ILEAHKGPFTG GHTGLYEILT+SW
Sbjct:    1 LHADAHDFDSQTNSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHVALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSFQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIIAGHMYRTNWGIGHSMKEILEAHKGPFTGAGHTGLYEILTTSW 298

[Close]

BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Match: A0A0U5A1F8_9PHAE (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) n=9 Tax=Stramenopiles TaxID=33634 RepID=A0A0U5A1F8_9PHAE)

HSP 1 Score: 627 bits (1617), Expect = 2.100e-221
Identity = 294/305 (96.39%), Postives = 300/305 (98.36%), Query Frame = 1

Query:  103 TTTWIWNLHADAHDFDSQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKGLVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW 1017
            TTTWIWNLHADAHDFD QT SLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGL+MSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIH+ALPINKLLDAGV++QEIPLPYEFLINRELI QLYPSFKKGLVPFFSL WGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMK+ILEAHKGPFTG GHTGLYEILT+SW
Sbjct:    1 TTTWIWNLHADAHDFDIQTNSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPISIKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELYWTAIGGLVMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGCLSWSGHQIHVALPINKLLDAGVSAQEIPLPYEFLINRELISQLYPSFKKGLVPFFSLNWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGHMYRTNWGIGHSMKEILEAHKGPFTGAGHTGLYEILTTSW 305

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig58169.13421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D1J7A3_ECTSI	4.090e-245	95.87	Photosystem I P700 chlorophyll a apoprotein A1 n=2...	[more]
B2XT52_HETAK	8.360e-228	88.50	Photosystem I P700 chlorophyll a apoprotein A1 n=6...	[more]
A0A514CPQ8_9STRA	1.630e-225	86.43	Photosystem I P700 chlorophyll a apoprotein A1 n=5...	[more]
C6KIP4_AURAN	1.630e-225	87.61	Photosystem I P700 chlorophyll a apoprotein A1 n=1...	[more]
B7T241_VAULI	4.190e-225	87.61	Photosystem I P700 chlorophyll a apoprotein A1 n=1...	[more]
A0A514CPH9_9STRA	4.480e-225	86.73	Photosystem I P700 chlorophyll a apoprotein A1 n=2...	[more]
PSAA_GUITH	7.560e-224	86.43	Photosystem I P700 chlorophyll a apoprotein A1 n=2...	[more]
A0A499U919_9PHAE	7.710e-222	98.32	Photosystem I P700 apoprotein A1 (Fragment) n=2 Ta...	[more]
A0A8D5NJP7_9PHAE	1.440e-221	97.65	Photosystem I P700 apoprotein A1 (Fragment) n=1 Ta...	[more]
A0A0U5A1F8_9PHAE	2.100e-221	96.39	Photosystem I P700 chlorophyll a apoprotein A1 (Fr...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig58169	contig	H-paniculata_contig58169:3..1019 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	696.4
Seed ortholog evalue	6.5e-198
Seed eggNOG ortholog	2880.D1J7A3
Preferred name	psaA
KEGG ko	ko:K02689,ko:K02690
KEGG Pathway	ko00195,ko01100,map00195,map01100
KEGG Module	M00163
Hectar predicted targeting category	other localisation
GOs	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.	chlorophyll binding
EggNOG OGs	28JJ8@1,2QRYE@2759
COG Functional cat.	C
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko00194
Exons	1
Model size	1017
Cds size	1017
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930632.729959-CDS-H-paniculata_contig58169:2..1019	1622930632.729959-CDS-H-paniculata_contig58169:2..1019	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig58169 3..1019 -
1691481381.60323-CDS-H-paniculata_contig58169:2..1019	1691481381.60323-CDS-H-paniculata_contig58169:2..1019	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig58169 3..1019 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig58169.13421.1	prot_H-paniculata_contig58169.13421.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig58169 3..1019 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig58169:3..1019-
coding sequence from alignment at H-paniculata_contig58169:3..1019-

protein sequence of mRNA_H-paniculata_contig58169.13421.1

>prot_H-paniculata_contig58169.13421.1 ID=prot_H-paniculata_contig58169.13421.1|Name=mRNA_H-paniculata_contig58169.13421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=339bp
KVKVLVDRNNISPTSFEKWAKPGHFSRTLSKGPKTTTWIWNLHADAHDFD
SQTKSLEEVSRKIFSAHFGQLSIIFLWISGMHFHGAYFSNYLAWLNNPIS
IKPSAQVVWPIVGQEILNGDVGGNFQGVQITSGFFQLWRAEGITSEIELY
WTAIGGLIMSGLMLFGGWFHYHKAAPKLEWFQNAESMLNHHLSGLLGLGC
LSWSGHQIHIALPINKLLDAGVASQEIPLPYEFLINRELIGQLYPSFKKG
LVPFFSLQWGEYSDFLTFKGGLNPVTGGLWLSDTAHHHLALAVLFIVAGH
MYRTNWGIGHSMKDILEAHKGPFTGTGHTGLYEILTSSW

mRNA from alignment at H-paniculata_contig58169:3..1019-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig58169.13421.1 ID=mRNA_H-paniculata_contig58169.13421.1|Name=mRNA_H-paniculata_contig58169.13421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1017bp|location=Sequence derived from alignment at H-paniculata_contig58169:3..1019- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGTAAAAGTTCTCGTTGATCGTAATAATATTAGTCCAACTAGTTTTGA
AAAATGGGCTAAACCAGGGCATTTTTCACGTACATTATCTAAAGGTCCAA
AAACAACAACATGGATTTGGAATTTACATGCTGATGCACATGATTTTGAT
AGTCAAACAAAATCTCTAGAAGAAGTTTCTAGAAAGATTTTTAGTGCTCA
TTTTGGACAATTATCAATCATATTTTTATGGATAAGTGGGATGCATTTCC
ATGGTGCATATTTCTCAAATTATTTAGCATGGTTAAATAATCCTATTAGT
ATTAAACCTAGTGCACAAGTTGTTTGGCCAATTGTTGGCCAAGAGATCTT
AAATGGTGATGTAGGTGGTAATTTCCAAGGTGTTCAAATAACATCAGGAT
TTTTTCAATTGTGGCGTGCTGAAGGTATAACAAGTGAAATTGAATTATAT
TGGACAGCAATTGGTGGATTAATTATGTCAGGGTTAATGCTATTTGGTGG
TTGGTTTCACTATCATAAAGCTGCACCAAAACTAGAGTGGTTTCAAAACG
CTGAGTCAATGTTAAATCATCATTTATCTGGTTTATTAGGGTTAGGTTGT
CTTTCTTGGTCAGGACATCAAATTCATATAGCATTACCTATTAATAAACT
ATTAGATGCTGGGGTTGCTTCACAAGAAATCCCACTGCCTTATGAATTTC
TTATAAACCGAGAATTAATTGGCCAATTATACCCAAGTTTTAAAAAAGGT
TTAGTACCTTTCTTTTCATTGCAGTGGGGTGAATACTCTGATTTTCTAAC
ATTTAAGGGTGGTTTAAACCCTGTAACAGGTGGACTTTGGTTAAGTGATA
CAGCCCACCATCATTTAGCTTTAGCTGTTTTATTTATTGTTGCAGGTCAT
ATGTACCGTACAAATTGGGGAATTGGTCATAGTATGAAAGATATTTTAGA
AGCACACAAGGGTCCATTTACTGGTACAGGGCACACAGGGTTATATGAAA
TTTTAACGAGTTCTTGG

Coding sequence (CDS) from alignment at H-paniculata_contig58169:3..1019-

>mRNA_H-paniculata_contig58169.13421.1 ID=mRNA_H-paniculata_contig58169.13421.1|Name=mRNA_H-paniculata_contig58169.13421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2034bp|location=Sequence derived from alignment at H-paniculata_contig58169:3..1019- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGTAAAAGTTCTCGTTGATCGTAATAATATTAGTCCAACTAGTTTTGA
AAAATGGGCTAAACCAGGGCATTTTTCACGTACATTATCTAAAGGTCCAA
AAACAACAACATGGATTTGGAATTTACATGCTGATGCACATGATTTTGAT
AGTCAAACAAAATCTCTAGAAGAAGTTTCTAGAAAGATTTTTAGTGCTCA
TTTTGGACAATTATCAATCATATTTTTATGGATAAGTGGGATGCATTTCC
ATGGTGCATATTTCTCAAATTATTTAGCATGGTTAAATAATCCTATTAGT
ATTAAACCTAGTGCACAAGTTGTTTGGCCAATTGTTGGCCAAGAGATCTT
AAATGGTGATGTAGGTGGTAATTTCCAAGGTGTTCAAATAACATCAGGAT
TTTTTCAATTGTGGCGTGCTGAAGGTATAACAAGTGAAATTGAATTATAT
TGGACAGCAATTGGTGGATTAATTATGTCAGGGTTAATGCTATTTGGTGG
TTGGTTTCACTATCATAAAGCTGCACCAAAACTAGAGTGGTTTCAAAACG
CTGAGTCAATGTTAAATCATCATTTATCTGGTTTATTAGGGTTAGGTTGT
CTTTCTTGGTCAGGACATCAAATTCATATAGCATTACCTATTAATAAACT
ATTAGATGCTGGGGTTGCTTCACAAGAAATCCCACTGCCTTATGAATTTC
TTATAAACCGAGAATTAATTGGCCAATTATACCCAAGTTTTAAAAAAGGT
TTAGTACCTTTCTTTTCATTGCAGTGGGGTGAATACTCTGATTTTCTAAC
ATTTAAGGGTGGTTTAAACCCTGTAACAGGTGGACTTTGGTTAAGTGATA
CAGCCCACCATCATTTAGCTTTAGCTGTTTTATTTATTGTTGCAGGTCAT
ATGTACCGTACAAATTGGGGAATTGGTCATAGTATGAAAGATATTTTAGA
AGCACACAAGGGTCCATTTACTGGTACAGGGCACACAGGGTTATATGAAA
TTTTAACGAGTTCTTGGAAGGTAAAAGTTCTCGTTGATCGTAATAATATT
AGTCCAACTAGTTTTGAAAAATGGGCTAAACCAGGGCATTTTTCACGTAC
ATTATCTAAAGGTCCAAAAACAACAACATGGATTTGGAATTTACATGCTG
ATGCACATGATTTTGATAGTCAAACAAAATCTCTAGAAGAAGTTTCTAGA
AAGATTTTTAGTGCTCATTTTGGACAATTATCAATCATATTTTTATGGAT
AAGTGGGATGCATTTCCATGGTGCATATTTCTCAAATTATTTAGCATGGT
TAAATAATCCTATTAGTATTAAACCTAGTGCACAAGTTGTTTGGCCAATT
GTTGGCCAAGAGATCTTAAATGGTGATGTAGGTGGTAATTTCCAAGGTGT
TCAAATAACATCAGGATTTTTTCAATTGTGGCGTGCTGAAGGTATAACAA
GTGAAATTGAATTATATTGGACAGCAATTGGTGGATTAATTATGTCAGGG
TTAATGCTATTTGGTGGTTGGTTTCACTATCATAAAGCTGCACCAAAACT
AGAGTGGTTTCAAAACGCTGAGTCAATGTTAAATCATCATTTATCTGGTT
TATTAGGGTTAGGTTGTCTTTCTTGGTCAGGACATCAAATTCATATAGCA
TTACCTATTAATAAACTATTAGATGCTGGGGTTGCTTCACAAGAAATCCC
ACTGCCTTATGAATTTCTTATAAACCGAGAATTAATTGGCCAATTATACC
CAAGTTTTAAAAAAGGTTTAGTACCTTTCTTTTCATTGCAGTGGGGTGAA
TACTCTGATTTTCTAACATTTAAGGGTGGTTTAAACCCTGTAACAGGTGG
ACTTTGGTTAAGTGATACAGCCCACCATCATTTAGCTTTAGCTGTTTTAT
TTATTGTTGCAGGTCATATGTACCGTACAAATTGGGGAATTGGTCATAGT
ATGAAAGATATTTTAGAAGCACACAAGGGTCCATTTACTGGTACAGGGCA
CACAGGGTTATATGAAATTTTAACGAGTTCTTGG