mRNA_H-paniculata_contig581.13407.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: A0A6H5KGF5_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE) HSP 1 Score: 458 bits (1179), Expect = 4.750e-157 Identity = 231/328 (70.43%), Postives = 261/328 (79.57%), Query Frame = 2
Query: 191 GFGPRS-----PRVGVRTKEPLPE--EQVPVAAGELPDDAFSQYPPLSTQQLATLKRAEDIDLGHGETIPAEVVNRIKEKHGFKLFDEKLFPGIRLLHADPVVFEVDNFFTPEECDAYISMSTEKLPKGRKGSLKSMEIRSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVEDISLWEEPQTVRYRPGEKFSWHLDALPPSETGASKGGQRTATVLVYLTNLQGNAGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIADYTRRWRE 1153
GFG +S ++ K P P +Q PV AGELP+DAFSQ+PPL+ +Q TL++A G P EV +RI+E+HGF+ FDEKLFPGIRLLHADPVVFEV+ FFTP+ECDAYI+MST K RKG L E++SATTSS Q QQ TSTTWFHHY APELVAKAS LLGV+D S WEEPQTVRYRPGE+F+WHLDALPPSE GASKGGQRTATVLVYLTN+ N GGATAFRDLGPLRVRPKKGKCLVFFPSFGGE GSPFD+R LHAGEVVG+G KA+EKYIAQLWCHKK YP +VPEG+SHEAAE+ I DY RR+ E
Sbjct: 31 GFGKQSRSNTPAKLKTPAKAPYPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAP---AGKATAFPVEVADRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSS--QCQQXXTSTTWFHHYASAPELVAKASLLLGVDDYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYARRFAE 353
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: D7G1H9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 261 bits (667), Expect = 5.940e-80 Identity = 140/252 (55.56%), Postives = 168/252 (66.67%), Query Frame = 2
Query: 437 LFPGIRLLHADPVVFEVDNFFTPEECDAYISMSTEK-------------LPKGRKGSLKSMEIRSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVE-DISLWEEPQTVRYRPGEKFSWHLDALPPSETGASKGGQRTATVLVYLTNLQGNAGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIADYTRRWR 1150
LFPG+RLLHA+P V V +FFT EECD YIS S GS M+ RSAT ++ QRTSTTWFH + PEL+AKASAL+GV + WEE QTVRYRPGEKF+WHLDALPP+ AS+GGQR AT+LVYLT + GGATAFRDLGPLRVRP+KG L+FFPS GG P PFD RTLHAGEVV G + ++K+IAQLW + Y VP+ N HE A V+A++ + W+
Sbjct: 100 LFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGSGPHMQ-RSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEFDKIWQ 349
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: A0A6H5L0Y5_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 268 bits (685), Expect = 6.330e-80 Identity = 158/376 (42.02%), Postives = 197/376 (52.39%), Query Frame = 2
Query: 269 GELPDDAFSQYPPLSTQQLATLKRAEDIDL----------GHGETIPAEVVNRIKEKHGFKLF-------------------------------------------------------DEKLFPGIRLLHADPVVFEVDNFFTPEECDAYISMSTEKLPKGRKGSLKSMEI----------------RSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVE-DISLWEEPQTVRYRPGEKFSWHLDALPPSETGASKGGQRTATVLVYLTNLQGNAGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIADYTRRWR 1150
G+LPDD F+ +PPLS L ++ + DL G E +P +V+ I+ +HG + F LFPG+RLLHA+P V V +FFT EECD YIS S RSAT ++ QRTSTTWFH + PEL+AKASAL+GV + WEE QTVRYRPGEKF+WHLDALPP+ ASKGGQR AT+LVYLT + GGATAFRDLGPLRVRP+KG L+FFPS GG P PFD RTLHAGEVV G + ++K+IAQLW ++ Y VP+ N HE A +A++ + W+
Sbjct: 201 GQLPDDDFATFPPLSPDTLKSIMGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEFDKIWQ 575
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: A0A7S2KCF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 251 bits (640), Expect = 8.050e-75 Identity = 131/237 (55.27%), Postives = 161/237 (67.93%), Query Frame = 2
Query: 440 FPGIRLLHADPVVFEVDNFFTPEECDAYISMSTEKLPKGRKGSLKSMEIRSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVEDISLWEEPQTVRYRPGEKFSWHLDALPPSETGASKGGQRTATVLVYLTNLQGNAGGATAFRDLGP-----LRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIADY 1135
F R+LH DP+V VD+FFT EECD YI+MS P ++ RS T ++ + QRTSTTWFHHY PEL+AK+S L G++DI ++EEPQTVRY+P +KF+WHLDAL P SKGGQRTAT+LVYLT+L GGAT FRDLGP L+V+PKKG L+FFP+ GG P +PFD RTLHAGEVV K+ +K+IAQLW + SY VP N H AA E I+ Y
Sbjct: 202 FDKFRVLHIDPLVIAVDDFFTHEECDKYIAMSD---PTAGNKDGDAVMTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLDDIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKS-DKWIAQLWLREDSYEPTVPPENVHAAATEPISQY 434
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: A0A7S2N1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.430e-71 Identity = 125/238 (52.52%), Postives = 156/238 (65.55%), Query Frame = 2
Query: 440 FPGIRLLHADPVVFEVDNFFTPEECDAYISMSTEKLPK-GRKGSLKSMEI-RSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVEDISLWEEPQTVRYRPGEKFSWHLDALPPSETGASKGGQRTATVLVYLTNLQGNAGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIAD 1132
F R+LH DP++ +D+F TP ECD YIS+++ PK + + MEI +S T + + QRTSTTWFHHY L+AKAS LLG++ I WEEPQTVRYR EKF+WHLDAL PSE GGQR AT+LVYL +L GG+T FRDLG PL+V+PKKG L+FFP+ GG P PFD RTLHAGE V + +K+IAQLW + Y P GNSHEAA E +++
Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSN--PKYDKNANTAPMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIERWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSD-ESDDDKWIAQLWLREHVYTPTAPPGNSHEAAVEAVSE 291
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: A0A7S2UAB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 242 bits (618), Expect = 4.300e-71 Identity = 132/245 (53.88%), Postives = 163/245 (66.53%), Query Frame = 2
Query: 434 KLFPGIRLLHADPVVFEVDNFFTPEECDAYISMSTEKLPKG----RKGS-LKSMEI-RSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVEDISLWEEPQTVRYRPGEKFSWHLDALPPSETGASKGGQRTATVLVYLTNLQGNAGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIADY 1135
K F R+LH DP+V VD+FFTPEECDA I+ ST + ++G+ L M+I +S T +S+ + QRTSTTWFHHY PEL+AKA L+G+ DIS +EEPQTVRYR E F+WHLDAL P+ A KGGQR AT+LVYLT+L GGAT FRDLG PL+VRPKKG L+FFP+ GG P P D RTLH GE V + ++K+IAQLW + Y P GNSH +A I+DY
Sbjct: 233 KPFSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGINDISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVASDAE-QDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: A0A448ZM68_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZM68_9STRA) HSP 1 Score: 240 bits (613), Expect = 1.600e-70 Identity = 123/245 (50.20%), Postives = 160/245 (65.31%), Query Frame = 2
Query: 440 FPGIRLLHADPVVFEVDNFFTPEECDAYISMSTEKLP-KGRKGSLKSMEIRSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVEDISLWEEPQTVRYRPGEKFSWHLDALPPSETGASKGGQRTATVLVYLTNLQGNAGGATAFRDLGP------------LRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIADY 1135
F I +LH DP+V +D+FFT EECD Y+ MS + +G + ++ S + RS T + + QRTSTTWFHHY PEL++KAS L+G++ I WEEPQTVRY+ EKF+WHLDAL P ++ A KGGQR AT+LVYL +L+ +GGAT FRDL P L+V+PKKG L+FFP+ GG PG+PFD RTLH GEVV G +K+I+QLW Y P GN HE A + + +Y
Sbjct: 221 FEKINVLHLDPLVLSIDDFFTEEECDRYVEMSLAPVTDEGSQKTMDSFKTRSKTVGKDKNAKSQRTSTTWFHHYKNVPELMSKASRLVGLDTIDRWEEPQTVRYKRNEKFTWHLDALAPDQSTAEKGGQRLATLLVYLKDLE--SGGATIFRDLTPATGETDDNASGFLKVQPKKGSALMFFPAAGGIPGAPFDIRTLHCGEVV-PGASETDKWISQLWLRATXYTPTAPPGNLHEEALDRVKEY 462
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: A0A7S1ZRX7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 233 bits (594), Expect = 3.230e-70 Identity = 121/238 (50.84%), Postives = 156/238 (65.55%), Query Frame = 2
Query: 440 FPGIRLLHADPVVFEVDNFFTPEECDAYISMSTEKLPKGRKGSLKSMEI-RSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVEDISLWEEPQTVRYRPGEKFSWHLDALPPSETGASKGGQRTATVLVYLTNLQGNAGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIADY 1135
F R+LH DP+V VD+F T +ECD +++ T+ + + M+I +S T + + QRTSTTWFHHY P+L+AKAS LLG+++I WEEPQTVRYR EKF+WHLDAL PS+ A GGQR AT++VYL +L +GG+T FRDLG PL+V PKKG LVFFP+ GG P PFD RTLHAGE V + +K+IAQLW + Y P GN+H AA + I+ Y
Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVAL-TDNPKYDKNANTAPMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSD-ESEDDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: K0SVE6_THAOC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 238 bits (608), Expect = 1.100e-69 Identity = 126/241 (52.28%), Postives = 158/241 (65.56%), Query Frame = 2
Query: 440 FPGIRLLHADPVVFEVDNFFTPEECDAYISMS--TEKLPKGRKGSLKSMEI-RSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVEDISLWEEPQTVRYRPGEKFSWHLDALPPSETG-ASKGGQRTATVLVYLTNLQGNAGGATAFRDLG---PLRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIADYTR 1141
F R+LH DP+V VD+FFT EECD Y+ MS E G+L+ + + +S T +S+ + QRTSTTWFHHY PEL+A+A+ LLG+ IS +EEPQTVRYR EKF+WHLDAL P +S GQR +T+LVYLT+L+ GGAT FRDLG PL+VRPKKG L+FFPS GG P PFD RTLH GE VG+ EK+IAQLW ++ Y P G+ H A I +Y +
Sbjct: 229 FEQFRVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGALQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLPGISRFEEPQTVRYRRSEKFTWHLDALSPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGED-APNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEYCK 468
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Match: B5Y5K1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5K1_PHATC) HSP 1 Score: 235 bits (600), Expect = 5.570e-69 Identity = 132/313 (42.17%), Postives = 186/313 (59.42%), Query Frame = 2
Query: 209 PRVGVRTKEPLPEEQVPVAAGELPDDAFSQYPPLSTQQLATLKRAEDIDLGHGETIPAEVVNRIKEKHGFKLFDEKLFPGIRLLHADPVVFEVDNFFTPEECDAYISMSTEKLPKGRKGSLKSMEIRSATTSSESQFQQQRTSTTWFHHYVCAPELVAKASALLGVEDISLWEEPQTVRYRPGEKFSWHLDALPPSETGASKGGQRTATVLVYLTNLQGNAGGATAFRDL----GPLRVRPKKGKCLVFFPSFGGEPGSPFDTRTLHAGEVVGKGKKAREKYIAQLWCHKKSYPAAVPEGNSHEAAEEVIADY 1135
PR T EP+ +++ VA + P + +++ L + AT + T PA L F R+LH DP+V +D+FFT ECD Y++++T+ +K ++ +E RS T ++ + QRTSTT+++H+ PEL+AKAS LLG++ I WEEPQTVRYR EKF+WHLDAL P+E GGQR AT+LVY T+LQ + GGAT FRDL G L VRP++G L+FFP+ GG P +PFD RTLH G+ V + ++K+I+QLW + SY P GNSH A + I++Y
Sbjct: 129 PRFNYETSEPVSLDELMVAPKDPPSISRNEFDDLLS--AATGRPVS--------TPPASTFASTPSSADLPLDALPPFEKFRILHVDPLVLGIDDFFTAAECDRYVALATQN----QKHNI--LESRSPTVGKDAAAKAQRTSTTYYNHFEGVPELMAKASRLLGLQSIDRWEEPQTVRYRKNEKFTWHLDALGPNENNPGLGGQRLATLLVYHTDLQSDEGGATMFRDLTGTNGRLAVRPRRGAALLFFPAAGGIPNAPFDVRTLHCGQAVSATSQ-QDKWISQLWLRQSSYTPTAPPGNSHSQATKAISEY 424 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig581.13407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig581.13407.1 >prot_H-paniculata_contig581.13407.1 ID=prot_H-paniculata_contig581.13407.1|Name=mRNA_H-paniculata_contig581.13407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=367bp MLAVRCVLLFFAALMPCSLALFHKQIATDATRQSSACFTLNMIGFGPRSPback to top mRNA from alignment at H-paniculata_contig581:10116..12357+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig581.13407.1 ID=mRNA_H-paniculata_contig581.13407.1|Name=mRNA_H-paniculata_contig581.13407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2242bp|location=Sequence derived from alignment at H-paniculata_contig581:10116..12357+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig581:10116..12357+ >mRNA_H-paniculata_contig581.13407.1 ID=mRNA_H-paniculata_contig581.13407.1|Name=mRNA_H-paniculata_contig581.13407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2202bp|location=Sequence derived from alignment at H-paniculata_contig581:10116..12357+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |