mRNA_H-paniculata_contig581.13406.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig581.13406.1
Unique NamemRNA_H-paniculata_contig581.13406.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: D8LRR6_ECTSI (DUF4149 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR6_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 2.000e-74
Identity = 119/219 (54.34%), Postives = 162/219 (73.97%), Query Frame = 2
Query:  188 RQVRVKVKAEAEQGTSGSVQNTSQDLSVQQGQASVKPAFHNKNIFRVATILATTGLAARGSLLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIRGCPLRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLAIMMPV 844
            R++   ++ ++E G SG    +  D S QQ  A ++PA HNKN  RVA IL   GLA++G++LVPG+L+K +HMV+  +WMGS +W TF AGITM RN+PRQT GK+Q+KLFP YF  +F SI A++IIRGCPLR R+GV LL+S   T  N+ +L+PKST +M++R+KLED+KK D +EYK LG  F  +HG SSF NL AL+G+FVYAW+LA ++P+
Sbjct:   37 RRMMTAMETKSEAGPSGVQSLSKWDPSAQQ--AFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHMVALNAWMGSTLWTTFFAGITMMRNLPRQTFGKLQSKLFPLYFQFNFVSILAIYIIRGCPLRTRAGVTLLVSLFSTLLNLVLLEPKSTSIMLERYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVIPI 253          
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A6H5KHA9_9PHAE (DUF4149 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA9_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.280e-38
Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 2
Query:  200 VKVKAEAEQGTSGSVQNTSQDLSVQQGQASVKPAFHNKNIFRVATILATTGLAARGSLLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIRGCPLR 592
            ++VK EA  G SG    +  D S QQ  A ++PA HNKN  RVA IL   GLA++G++LVPG+L+K +H+V+  +WMGS +W TF AGITM RN+PRQT GK+Q+KLFP YF L+F SI A++IIRGCPLR
Sbjct:    1 MEVKPEA--GPSGVQSLSKWDPSAQQ--AFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPLYFQLNFASILAIYIIRGCPLR 127          
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A0G4F9E7_VITBC (DUF4149 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F9E7_VITBC)

HSP 1 Score: 147 bits (372), Expect = 2.390e-37
Identity = 73/189 (38.62%), Postives = 121/189 (64.02%), Query Frame = 2
Query:  290 VKPAFHNKNIFRVATILATTGLAARGSLLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYF------LLHFCSIGAMFIIRGCPLRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLAIMM 838
            V PA HN+N  R+  +L+T  LA+  ++ V   L+ F+H++++A+W+GS+++ TF+AGITM RN+PR+T G++Q+KLFP YF      L+   + G   ++    +     VAL++    T  N+ +L+PKST++M +R+++ED+ + D  EYK+L   F  +HG SS  NL+AL G   + W LA ++
Sbjct:  106 VAPAVHNRNSVRLLALLSTLLLASGSTVFVSKQLTLFVHLLAYATWLGSVIYTTFVAGITMFRNLPRKTFGRLQSKLFPLYFQLCTGMLIVLLTTGGASVLPNRAMMANLAVALVM----TLANLFVLEPKSTEIMFKRYEMEDQGRKDDPEYKALAKGFGKFHGLSSLTNLIALCGGVAHGWTLASLI 290          
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A7S3RBJ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBJ6_9SPIT)

HSP 1 Score: 137 bits (346), Expect = 9.630e-35
Identity = 81/186 (43.55%), Postives = 108/186 (58.06%), Query Frame = 2
Query:  281 QASVKPAFHNKNIFRVATILATTGLAARGSLLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMF-IIRGCPLRG---RSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDL 826
            QA V PA  N   FR A+I     LAA GS  +   ++ F H++SF S  GSM++ TF AGITM +N+PRQT G++Q+KLFP YF LH  S+  M   +R     G   R   A   + LFT  N+  L+P+ST VM  R+ LE+E K + +EYK    +F   HG SS  NL AL+G   ++W L
Sbjct:    3 QAWVPPAIWNTPAFRAASIATALALAAAGSRQLGARMAIFAHLISFGSLFGSMIYTTFFAGITMFKNLPRQTFGRLQSKLFPIYFKLHAASLCVMLGTLRAVASGGSLTRPVYACGSALLFTLLNLFYLEPQSTKVMFTRYDLENEGKQESDEYKVAAKKFGPLHGMSSLANLGALIGVIAHSWWL 188          
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A835YZR0_9STRA (DUF4149 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.770e-34
Identity = 84/192 (43.75%), Postives = 116/192 (60.42%), Query Frame = 2
Query:  281 QASVK---PAFHNKNIFRVATILATTGLAARGSLLVPGS-LSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLH-FCSIGAMFIIRGCPLRGR----SGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLA 829
            QAS K   PA HN N  RVA ++A  GLAARGSL    + +  F+H++SF   +GS ++ TFIAGI M +N+PRQT GK+Q+KLFPAYF L+  C++  +  + G    G     + V L  + +    N+ +L+P+ST VM+ R++LE+  +    EY  L   F   HG SS +NL AL GA  YAW LA
Sbjct:  102 QASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLA 293          
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: W7TXS6_9STRA (DUF4149 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXS6_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.480e-31
Identity = 69/187 (36.90%), Postives = 112/187 (59.89%), Query Frame = 2
Query:  290 VKPAFHNKNIFRVATILATTGLAARGS-LLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIR---GCPLRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLAIMM 838
            ++PAFHNK   R+  +LA   +A + S + +P S + +IH++ F +  GS+M+ TF+ G+ M +++PRQT G++Q+KLFP YF     ++    +     G P +    +A  L+A     N   L+P ST VM QR+ LE + + +  EYK L  +F   HG SS VNL+ ++G FV+A+ L++M+
Sbjct:   82 IEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALALALQLLTGKTLGLPAKAMRWLAASLAA--ALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266          
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A7S3L6U9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6U9_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.830e-31
Identity = 77/184 (41.85%), Postives = 107/184 (58.15%), Query Frame = 2
Query:  293 KPAFHNKNIFRVATILATTGLAARGS-LLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLL-HFCSIGAMFIIRGCP--LRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKK-TDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLA 829
            K   HN   FR   +L    LA   S   +P   S  +H++SFA+W GS+ + TF+AGITM +N+PRQT GK+QAKLFP YF L  F  +  +  +   P  ++  S  AL L+ + T  N  +L+P ST  MM+R++LED+    D +EYK+L   F  +HG SS  NL+AL G   +A  LA
Sbjct:   68 KKRLHNTAAFRSLALLGALALAGFSSPTALPAKASASLHLLSFATWFGSVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALGSFTLLLQLITLPSLPVTIKMASTKALSLAFVMTLVNQFLLEPMSTSNMMRRYELEDQDGGKDTDEYKTLKASFGKFHGMSSLTNLIALCGGVAHAVYLA 251          
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A1Z5KI85_FISSO (DUF4149 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI85_FISSO)

HSP 1 Score: 127 bits (319), Expect = 2.180e-30
Identity = 73/186 (39.25%), Postives = 108/186 (58.06%), Query Frame = 2
Query:  293 KPAFHNKNIFRVATILAT---TGLAARGSL-LVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIRGCPLRGRSGVALLLSA-------LFTFFNMAILDPKSTDVMMQRHKLEDEKKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYA 817
            KP  HN   FR   +L+     G +++  L L+P  +   +H +SFA+W G++ + TF+AGITM +N+PRQT GK+QAKLFP YF L   ++ A+ +I    L+  +G A   SA       L T  N   L+PKST  MM+R++LED+ + + + YK+L   F  +HG SS  NL+ L     +A
Sbjct:   41 KPRLHNTATFRTIALLSALLAAGFSSKSPLKLLPAQVLGSVHTISFATWFGTVAYTTFVAGITMFKNLPRQTFGKLQAKLFPKYFALSSFTL-ALQLITLKSLKAMTGKAAHSSAKALGVALLMTLINQFFLEPKSTSNMMERYELEDKGEQESDRYKTLKANFGKFHGMSSLTNLIGLCAGVAHA 225          
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A7S2EYH8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EYH8_TRICV)

HSP 1 Score: 124 bits (310), Expect = 1.480e-29
Identity = 78/182 (42.86%), Postives = 111/182 (60.99%), Query Frame = 2
Query:  308 NKNIFRVATILATTGLAA--RGSLL--VPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIR-GCP-LRGRSGVALLLSAL-FTFFNMAILDPKSTDVMMQRHKLEDEKK-TDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLA 829
            N NIFR A+ILA  GLA    GS L  +  + +  +H++SFA+W G+M + TFI GIT  +N+PRQT G++Q+KLFP YF L   SI    I R   P L  +   A L +AL  T  N+  L+PKST +M +R++LE + +  + ++YK L   F  +HG SS  NL+AL GA  + + +A
Sbjct:   10 NNNIFRSASILAALGLAGYVSGSPLNTISSATAGTVHILSFATWFGTMFYTTFIFGITAFKNLPRQTFGRLQSKLFPKYFNLCAISIVLQLITRKSMPFLASKKVTAALGTALAMTLLNLFYLEPKSTKIMFERYELEGQPEGKESDKYKELASAFGKFHGISSLTNLIALCGAVAHGFYIA 191          
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Match: A0A7S2I6I8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I6I8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 3.430e-29
Identity = 78/190 (41.05%), Postives = 112/190 (58.95%), Query Frame = 2
Query:  305 HNKNIFRVATILATTGLA--ARGS--LLVPGSLSKFIHMVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSIGAMFIIRGCP-----LRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDEKK-TDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLAIMMPV 844
            HN   FR + +LAT G+A  A GS  + V    S  IH+++FA+W GSM + TFI GITM +N+PR+T GK+Q+KLFP YF L  C+I  +  I         +  ++ VAL +S + T  N+  L+P ST +M +R+ LE+     D ++YK L   F  +HG SS  NL+AL GA  + + LA  + V
Sbjct:  109 HNTAFFRFSAMLATIGVASYAIGSSPVKVSAKASATIHILAFATWFGSMAYTTFIGGITMFKNLPRKTFGKLQSKLFPIYFNL--CAITILLQILTLNFLPTVVTKKATVALGVSLVMTVLNLFYLEPTSTKIMFERYALEETSGGKDTDKYKKLAANFGKFHGMSSLTNLIALCGAIAHGFYLATALVV 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig581.13406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRR6_ECTSI2.000e-7454.34DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KHA9_9PHAE2.280e-3857.25DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A0G4F9E7_VITBC2.390e-3738.62DUF4149 domain-containing protein n=1 Tax=Vitrella... [more]
A0A7S3RBJ6_9SPIT9.630e-3543.55Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A835YZR0_9STRA2.770e-3443.75DUF4149 domain-containing protein n=1 Tax=Tribonem... [more]
W7TXS6_9STRA2.480e-3136.90DUF4149 domain-containing protein n=2 Tax=Monodops... [more]
A0A7S3L6U9_9STRA3.830e-3141.85Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5KI85_FISSO2.180e-3039.25DUF4149 domain-containing protein n=2 Tax=Fistulif... [more]
A0A7S2EYH8_TRICV1.480e-2942.86Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2I6I8_9STRA3.430e-2941.05Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig581contigH-paniculata_contig581:3441..7043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score184.1
Seed ortholog evalue4.7e-44
Seed eggNOG ortholog2880.D8LRR6
Preferred nameTMEM205
KEGG koko:K07884
KEGG Pathwayko04972,map04972
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Domain of unknown function (DUF4149)
EggNOG OGsKOG2886@1,KOG2886@2759
Ec32 ortholog descriptionDomain of unknown function DUF4149
Ec32 orthologEc-08_002150.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Exons6
Model size1382
Cds size441
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig581.13406.1prot_H-paniculata_contig581.13406.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig581 3976..5479 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930631.040288-UTR-H-paniculata_contig581:3440..39751622930631.040288-UTR-H-paniculata_contig581:3440..3975Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig581 3441..3975 -
1691481380.7784455-UTR-H-paniculata_contig581:3440..39751691481380.7784455-UTR-H-paniculata_contig581:3440..3975Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig581 3441..3975 -
1622930631.1503499-UTR-H-paniculata_contig581:5479..54881622930631.1503499-UTR-H-paniculata_contig581:5479..5488Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig581 5480..5488 -
1691481380.8436575-UTR-H-paniculata_contig581:5479..54881691481380.8436575-UTR-H-paniculata_contig581:5479..5488Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig581 5480..5488 -
1622930631.1628807-UTR-H-paniculata_contig581:6330..64501622930631.1628807-UTR-H-paniculata_contig581:6330..6450Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig581 6331..6450 -
1691481380.8535547-UTR-H-paniculata_contig581:6330..64501691481380.8535547-UTR-H-paniculata_contig581:6330..6450Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig581 6331..6450 -
1622930631.1833255-UTR-H-paniculata_contig581:6766..70431622930631.1833255-UTR-H-paniculata_contig581:6766..7043Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig581 6767..7043 -
1691481380.8635225-UTR-H-paniculata_contig581:6766..70431691481380.8635225-UTR-H-paniculata_contig581:6766..7043Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig581 6767..7043 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930631.0711644-CDS-H-paniculata_contig581:3975..41351622930631.0711644-CDS-H-paniculata_contig581:3975..4135Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig581 3976..4135 -
1691481380.7928371-CDS-H-paniculata_contig581:3975..41351691481380.7928371-CDS-H-paniculata_contig581:3975..4135Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig581 3976..4135 -
1622930631.107986-CDS-H-paniculata_contig581:4481..45771622930631.107986-CDS-H-paniculata_contig581:4481..4577Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig581 4482..4577 -
1691481380.8016102-CDS-H-paniculata_contig581:4481..45771691481380.8016102-CDS-H-paniculata_contig581:4481..4577Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig581 4482..4577 -
1622930631.1243703-CDS-H-paniculata_contig581:4997..50771622930631.1243703-CDS-H-paniculata_contig581:4997..5077Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig581 4998..5077 -
1691481380.818986-CDS-H-paniculata_contig581:4997..50771691481380.818986-CDS-H-paniculata_contig581:4997..5077Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig581 4998..5077 -
1622930631.13814-CDS-H-paniculata_contig581:5374..54791622930631.13814-CDS-H-paniculata_contig581:5374..5479Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig581 5375..5479 -
1691481380.8339896-CDS-H-paniculata_contig581:5374..54791691481380.8339896-CDS-H-paniculata_contig581:5374..5479Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig581 5375..5479 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig581.13406.1

>prot_H-paniculata_contig581.13406.1 ID=prot_H-paniculata_contig581.13406.1|Name=mRNA_H-paniculata_contig581.13406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MVSFASWMGSMMWVTFIAGITMARNMPRQTSGKIQAKLFPAYFLLHFCSI
GAMFIIRGCPLRGRSGVALLLSALFTFFNMAILDPKSTDVMMQRHKLEDE
KKTDLEEYKSLGVQFRNYHGGSSFVNLLALLGAFVYAWDLAIMMPV*
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mRNA from alignment at H-paniculata_contig581:3441..7043-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig581.13406.1 ID=mRNA_H-paniculata_contig581.13406.1|Name=mRNA_H-paniculata_contig581.13406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3603bp|location=Sequence derived from alignment at H-paniculata_contig581:3441..7043- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCGAGCGGGAGACCGAGAGGGTGTGGAGGCCTGAGAAGCCAGGAAACTA GGATCCCTTGGTTGCAGTGCAGAAAAAAATAGAAAAGCAAAGCAAGGGAT CATTAGAAGCAGTGTGGCGGAGGACTAACAGTGAGTAGAACGACCTCATC TTGAGGTCACCTACTGTACGGAATTTTCAAATCACGTCGTCAGGTTCGAG TCAAGGTTAAGGCTGAGGCGGAACAGGGAACAAGCGGTTCTGTACAAAAC ACGAGCCAGGACTTATCGGTGCAGCAGGTGAGTCAATTGTCTGGTGTGTG TTGCATTTCGTCTGTTGTCTGTGAGCTCTCAGAAGCTGGTTGGTTTTGCG TGAAATGTCACGCGCCAGTGTGGGTGAGACCGATGAATCCGCGCCCAACA CGCGGGTTCCGAAGCTTAATCCGAGCAGAAACAAAGACCTCCGTCGCTAA TTTTTTCTTCAAAAGAGGTGCATCACCAAAAAGTAAAGTCGATGTTTTGC ACTTCGTGGCACTGATAACCAAGTGCTGAATCGTCATTCATTCTCACTCA TGCTCGCTCCCTGTCACCTACATGTATGGCTAATGTGAACTAGGGGCAGG CATCCGTCAAGCCGGCGTTTCACAACAAGAACATCTTTCGAGTCGCGACT ATCCTAGCTACAACAGGGCTTGCGGCCCGAGGGAGCCTTCTGGTTCCTGG CAGCCTCAGCAAGGTACGAGGTGCAGGCGATGGTATCGCTATTGACACCT GAATAGTCAGCCGGTGTTGGATGGAAGTCCGAGAATATATAATCCTTTCA TGTACGACGGGATTCGGTACGGTCACATGTATACGACAGCGTTGCCGGGA GAGGCCACGGCCGAACTCATGCGCGTCACCATTGTGGCTTCGAAGATCCA CCCGGCGGTGTAGGCATGGGTTGCTCTGGGACATGCTTGACTGGCTCTAA CCACCCATTTCCAGTACAACGTTTTACAATGAATTGGTCACACTAGGCAG GGGGGCGAGATACAAGACAGCTCAGTCGTCCTCGTTGTTCATTCTTATAA ATCACACCAAAGGAGATGAAAGCATTACGATATACTTGTCTGATCTCACC TGGGCCAAAGCAATTGTATCCGTCCACATTCGATATTTCCCTCCTCCCCA TGCCTAAGATCACCTTCCCCCCCTCCTGGGGCGACGTGGGACTGTAAATA TCCACCCTTCGAAGTTTGTCGTATCGCAGGCAGCAGGGTCTGAAAAGATC GAGTTGAATATCTGTGTTGAATGACAAGCGTGCCCATATTCCCCACACGA CTCCAATATGCATTAGCATACATTGGAACGAGGGAATATAGAGAAGACAT TCAGATAATTTCTTCGCTGTCAGTCAGTCGCGGTCGAGTATACTGACCGG GAATCAACAGGGACGAACACTTGCATTCAAAGTCAACAGAACAAGAGTGA CACCTGCTAGGTCAGACTGTTGTTCGCTTTGCCCGCCATTTAACCACTTC CTTTGATTTTTATCTCAGTGTTCCTACTCGTTACGGTGCGACACGTTTTT TGCAGTTTATTCACATGGTATCTTTTGCCTCATGGATGGGCAGCATGATG TGGGTAACATTCATCGCAGGTATTACCATGGCCCGGAACATGCCCCGTCA AACCTCCGGGAAGATTCAGGTGTGAGGTGCTCAGACAGCTCACCTACTGA GCCGAGTACATGGTCGTCTGCTTCATTTATACGAAGATGTAGAGAACGCC TGTGCTTTGTCTAGTACGGCAAATGTGGACGGTTTTATGCCACTTCTAAT CTAATTTGTATGATACGGTACCTTCGATTGTGAGAAGGGTGACGATCAAG AGCGAGTCAGTGATTAGATGCAAGAGATGTGCACATTAGTTTCTCCGTCG GACGCTGTTGGGCTGATATATCCATGTCTTGTTGTGATTTCATTTTTTTG GGCTGTTTACTTGCAGGCCAAGCTGTTCCCAGCGTATTTTCTTCTTCACT TCTGCTCGATTGGCGCCATGTTCATCATACGCGGCTGTCCTCTCCGGTAA AAGTTTAGGCAAAATATTTCACTTAAAGCAGTCTCTTTCCATATACCAAT TTTCCATAGCGCCGAGATCGCGACACACGCTTCGCTACAAGTTGGGATTT TATTTTCCGATATTATCGCGCCTTCCGAATACATGGCTCGAGAGATGAAG AACCGAACGAATGTATTTTATTGGCGCTGCCATTCGTGTTGAAAATGTGG ATTGATTATATTAGCGAATACCTTCATGCGTGCCGAAGGCAATGTAGAAG TGACGGAAGCTGTTAAAGCGTTACGCAGTTGTGGAGCTTGCCAAGACTAT CAACAAGATATAATTCATGCTGGCGTAGAGGGTTGATCACGTGTGATGCT CTCAGCACATGCTATTCTGAAACGCTGTGAAGATGTTTTTGAACTCTTGT CGCTACCGTACTGCAGGGGTCGTAGCGGAGTTGCGCTTCTCCTTTCGGCT TTGTTCACATTCTTCAACATGGCAATATTAGACCCAAAGTCAACGGACGT CATGATGCAGAGGTGAGCAGAGTTCTGCCTTCAAATGTACCTCACTTTTT AACCTACTGTATGCTATGCACAAAGCCAAATGATGCCATAGTTATATTAC CGGTGCAGGTTGATATTTGTATTGTTCGATGTTTTGTGCGCTGACAGATT CCTCACCAACTTGAAGTGTTCAGCAATATCTTTTACACATTTGAAGTTAC CCCAAATGATGACGAAGGCCTGGCCGAACAGAGCTAGGTTCTGCACTTCG GAGTCTTTTCGTGGTTGAACCGTTGAGGACCACTGTATGTTACCAAATGG CTTGCATGCGTTTCGCCATACTTTTCAACGAGCATGCTCTTCTGTGCTTT TTGAGCAGGCACAAATTGGAGGACGAGAAGAAGACGGATTTAGAAGAGTA CAAATCTCTCGGCGTGCAGTTTCGCAACTACCATGGGGGCTCATCTTTCG TCAATCTTTTAGCCCTTTTGGGTGCTTTTGTGTACGCCTGGGACTTGGCG ATAATGATGCCTGTGTAGACCAATTGGGCGCAGAATACGAAGGCCTTGGA GACCAGACGTAAATTCAAGTCTGTATTGGGAGCGGTGGTGGTCAAGTGTC ACAACCGTTGCGTTGTTTCTGCAGTAGATGCTAGTTTGTTGGTGGACTTT GTACGAGGAAATGTTGGGAATCTCATCGGGAGGTAGTTGCATTGTGGTGA CACCCCGCCGACATGCTGCTCATAATTGAACGAATCAAGCGAACACGGCG CTGCCGTAATCGCTCAAGTATGGTGTACATCACAGCACTTTTTGATTTCG CCAGTTACAACGCATTTTTGCCTTGCTTCGATTTTGCAACACAAGGTGTC AGAAACCCTGCCAAGATATGACACGTGGTTTCTGCGAGGCAGGCGTTCCA TAGGCAGCGGATCGATGTTGGCACAACTGGAGACTTGCCTGCTGATTTTT ACAGGCTGGGCCCAGAGAGAGGCCAAGAACCAATACCTTCTGCACAACAG TTATGAGATTCCGTACAACCCTAAAGAATCCCGGAGTGCACCGCATGCTC GGA
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Coding sequence (CDS) from alignment at H-paniculata_contig581:3441..7043-

>mRNA_H-paniculata_contig581.13406.1 ID=mRNA_H-paniculata_contig581.13406.1|Name=mRNA_H-paniculata_contig581.13406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig581:3441..7043- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTATCTTTTGCCTCATGGATGGGCAGCATGATGTGGGTAACATTCAT
CGCAGGTATTACCATGGCCCGGAACATGCCCCGTCAAACCTCCGGGAAGA
TTCAGATGGTATCTTTTGCCTCATGGATGGGCAGCATGATGTGGGTAACA
TTCATCGCAGGTATTACCATGGCCCGGAACATGCCCCGTCAAACCTCCGG
GAAGATTCAGGCCAAGCTGTTCCCAGCGTATTTTCTTCTTCACTTCTGCT
CGATTGGCGCCATGTTCATCATACGCGGCTGTCCTCTCCGGCCAAGCTGT
TCCCAGCGTATTTTCTTCTTCACTTCTGCTCGATTGGCGCCATGTTCATC
ATACGCGGCTGTCCTCTCCGGGGTCGTAGCGGAGTTGCGCTTCTCCTTTC
GGCTTTGTTCACATTCTTCAACATGGCAATATTAGACCCAAAGTCAACGG
ACGTCATGATGCAGAGGGGTCGTAGCGGAGTTGCGCTTCTCCTTTCGGCT
TTGTTCACATTCTTCAACATGGCAATATTAGACCCAAAGTCAACGGACGT
CATGATGCAGAGGCACAAATTGGAGGACGAGAAGAAGACGGATTTAGAAG
AGTACAAATCTCTCGGCGTGCAGTTTCGCAACTACCATGGGGGCTCATCT
TTCGTCAATCTTTTAGCCCTTTTGGGTGCTTTTGTGTACGCCTGGGACTT
GGCGATAATGATGCCTGTGTAGGCACAAATTGGAGGACGAGAAGAAGACG
GATTTAGAAGAGTACAAATCTCTCGGCGTGCAGTTTCGCAACTACCATGG
GGGCTCATCTTTCGTCAATCTTTTAGCCCTTTTGGGTGCTTTTGTGTACG
CCTGGGACTTGGCGATAATGATGCCTGTGTAG
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