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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1137 |
| Cds size | 771 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5725.13274.1 >prot_H-paniculata_contig5725.13274.1 ID=prot_H-paniculata_contig5725.13274.1|Name=mRNA_H-paniculata_contig5725.13274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=257bp
MGAQRRGCNEGTPQRKGKGERVRAVLPDPVVNEIKWWGRRGMWQKAEEAL
EKTIRAGGPPNISAYEAAIFAMGHSTKWQKALLLLDKMVANGIEPDERCY
AEAIKACGKAGKFDEAVGLLETMVKNDSSPSLAIFNMVLESCLIQKRAEQ
VPGVLVKMRQCGVQPNDETDRLAMLAVVAGRDWSQIVAMWKTLTKGGNRV
RGLKPKELLTIAKALGGLGEWKMVLQVLDVSALERYDGLPLLTLERCLNV
LGRGCR* back to topmRNA from alignment at H-paniculata_contig5725:3613..6636- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5725.13274.1 ID=mRNA_H-paniculata_contig5725.13274.1|Name=mRNA_H-paniculata_contig5725.13274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3024bp|location=Sequence derived from alignment at H-paniculata_contig5725:3613..6636- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AATGGGTGCACAGAGGAGGGGGTGCAATGAAGGCACCCCGCAACGGAAGG
GAAAAGGAGAGAGAGTAAGGGCGGTCTTACCTGATCCAGTCGTGAATGAG
ATTAAGTGGTGGGGCAGGCGTGGAATGTGGCAGAAAGCCGAGGAGGCGTT
GGAAAAAACGATCAGAGCGGGCGGTCCACCGGCAAGTGCGGTGGAACAGC
CCTAAAATGTACCCGCAGGCTGAGTTGCACTTGTGTTATTGGCTTACTCA
TGCACACTCCATGGTTGGTGTATTTTGATTTTAGAATCAGAGCAGTGTGT
TTTGGTCACGAAAAGCTCTTTTGATTTCAGATTTAATGTAGTCTTTGCAC
TGCAATCACGTCTGTTTTCCATTGCTGTATTCCTTCAGACGAGAATATCA
CAACAGCGATGGATCTTCGCGAAAGGTTTGCGACTCATGTGCTAAGATAG
GCACTTTTATTTTACTAGATAATTGAAAATCAGCTGTCGATTTTCATGAG
AAACGAGCTTGATTGTCTTTCCTGGTTCTTGCCGACCTTGAACTACAAAG
TACCGTGCACGCACGGGAGGCTGCTCTCGTTCTTTTACAAACGGTATGCA
GGTTACACCGATGTGCTTGTCCAAAGCCCAAACGAGTAGCGTGTATTAAT
AGTATAAGCAACGTGACTGCCCCCTCGTTTCAACAAGGTCTCTTCGACTG
TCACTGCGTTGTTAGTGCGATATCGTGCTGTTGTCCAGTCCAACCTTGCG
GTGGCATTTATGGTTGCTTTTTAAACAAGATATGTACATGATTCTCTCTC
TCCCCCACTCTGTCTCTGAATTCTTGCATGTATTCAGAACATTAGTGCGT
ACGAGGCGGCTATCTTCGCGATGGGACACAGTACTAAGTGGCAAAAAGCC
TTGCTGTTGTTGGATAAAATGGTTGCCAACGGCATAGAACCCGATGAAAG
GTGCTACGCAGAGGCTATCAAGGCGTGCGGCAAGGTAAAATGCCGCCACG
ATTTTTTTTTTGTCGGGATCTTTCAACAGCGACACAAATAATTAGACCGG
CAATGGCTACACCGGTGGGGCTTCATTTTCGCCAATGCTGTAGTTTGGTT
CATGCGGAGGCATGGTGCTGTCTCTTTTTATGATGCTGGTAATTCATGCT
GGTCACAAAATACCCTTTCAATGTTGGGTATACATTTTATGGTGTGACGG
TCTCGCGACACAACGAGGAAGTTTTGGTCGTCCTTCAAGTGGTACGGTTA
GAGTAGCTCAAATAGGGGAAGGGTGTATTATTTCGAGATCTGTTTGAACA
CAGACAACAGTTAGGATTATACAAGTTGAAGCTTGGCGGATAACCGTGTA
GCACACTTGTCCAGCACGAGCTTCTACACTGCTACACCGAAATTTTCTTC
ACACGCTTACTCTCGCGTGTTTTTCTATGTAGCTCGGTCTTCTTATATGC
ATTTGACTATCGAGATACGCCGTGTGGTTGTGGGTGTTTACGTGTTTCTC
TTGGGTGTCTACCGCCTGGTACGTGACAGGCCGGCAAGTTTGACGAGGCA
GTGGGTCTTTTGGAAACGATGGTGAAGAACGACTCGTCCCCTTCCCTGGC
CATCTTCAACATGGTGCTAGAGTCCTGCTTGATCCAGAAGAGAGCTGAGC
AAGTGAGACAAACTGCTATCGTATGTTTCCCGTCGCCGGACGCTGTTGAC
ACCGTTTCGTTTGGCTCGCTCTACACGGCGAATACCCCTGGCAATGCTCG
TGCACCAGCAGAGAATTTTAACCGTAAGTGCAGCGTATAGGAGTATGGCG
CAAACCTCGACAAACAGTAAAGCTTTGAAATTTTCTTTTCTATCTGACAA
GCCGATATTTCGATTCCCAGGTGCCTGGTGTGTTAGTAAAGATGCGACAG
TGCGGGGTGCAGCCAAATGACGAGACGGATCGACTAGCAATGTTGGCCGT
GGTGGCGGGGCGCGATTGGTCTCAGGTGAGTCACGAAACTGGCGGACTCT
GATTTTGTCATTTTCCACTGCTCCTTTTTTGGCAAGTCACGTCCATTGTT
TTAGAGAAGCAGTGCACATTCAATGGTCTTGCTTCACATCACCTAGTGGC
CACCGTACGTCTTGTCACTCTAAACATTTGATTAGACACTGGGAAAACCT
CGCAGTAAATTGTCATTATCATGGCAGTGTTATACAGTTATTCACGGTGG
GACCGACAAAGCCAGAAACTAATATCCGAAAAGATCCTTGGTCTGACCGT
AGATTTGTTCACGCTGATCCACTGGATGTCAACACACTCAGATGTTGGGC
GAGAGAGAAAGTGGGGGACTACATTAAGCGACGCGATGGGGCGCAGACTT
AAGTGCACCCATCTTAATGATAACCTCGCTCACGCCCATCCCTCGTTGTT
TTCTACTACCCTCCTCCAAAAAACCATGATGTTATGCTTGAAGATCGTGG
CCATGTGGAAAACTCTGACGAAGGGGGGAAATAGGGTGCGAGGATTGAAA
CCCAAGGAGCTCCTGACAATCGCCAAAGCGCTTGGCGGCCTCGGAGAGTG
GAAAATGGTTTTACAAGTGCTTGACGTTTCGGCGCTCGAGAGATACGATG
GTCTCCCTCTATTGACCCTGGAAAGGTGCTTGAATGTGCTCGGTCGGGGG
TGCCGATAATATGTCAAGTTTGCATGTACTAGTCAATTACATATACCGAC
AGCTGCATGGAGGGTTACTGTTTCCTCCCTGCTCTGGACAACTGTGGTTT
TTGTCGGCTACCACTGATTTCTCATCTCATGAGTGGCCAAGGTTTGGTCG
GCGATAAAGGGGTCAACGAATGTTGGAGAGGATGCCGCAGGCTCGTGTCT
TGAAGAGGATGCCTTCTGTCTTGTTTGATACCCCTACCCGCCCGAAACGG
TGCCGTGTGAACGTTTGATTTCACAGGGTAACATCAGGCATCTTGTGTGC
TGTTGTACCGCTGTGCTAACTGCATGTGCTGTCCTATTTGCTGTGCAACA
TGTCCATGTCTTCTCTCTTGGCAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5725:3613..6636- >mRNA_H-paniculata_contig5725.13274.1 ID=mRNA_H-paniculata_contig5725.13274.1|Name=mRNA_H-paniculata_contig5725.13274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1542bp|location=Sequence derived from alignment at H-paniculata_contig5725:3613..6636- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTGCACAGAGGAGGGGGTGCAATGAAGGCACCCCGCAACGGAAGGG
AAAAGGAGAGAGAGTAAGGGCGGTCTTACCTGATCCAGTCGTGAATGAGA
TTAAGTGGTGGGGCAGGCGTGGAATGTGGCAGAAAGCCGAGGAGGCGTTG
GAAAAAACGATCAGAGCGGGCGGTCCACCGATGGGTGCACAGAGGAGGGG
GTGCAATGAAGGCACCCCGCAACGGAAGGGAAAAGGAGAGAGAGTAAGGG
CGGTCTTACCTGATCCAGTCGTGAATGAGATTAAGTGGTGGGGCAGGCGT
GGAATGTGGCAGAAAGCCGAGGAGGCGTTGGAAAAAACGATCAGAGCGGG
CGGTCCACCGAACATTAGTGCGTACGAGGCGGCTATCTTCGCGATGGGAC
ACAGTACTAAGTGGCAAAAAGCCTTGCTGTTGTTGGATAAAATGGTTGCC
AACGGCATAGAACCCGATGAAAGGTGCTACGCAGAGGCTATCAAGGCGTG
CGGCAAGAACATTAGTGCGTACGAGGCGGCTATCTTCGCGATGGGACACA
GTACTAAGTGGCAAAAAGCCTTGCTGTTGTTGGATAAAATGGTTGCCAAC
GGCATAGAACCCGATGAAAGGTGCTACGCAGAGGCTATCAAGGCGTGCGG
CAAGGCCGGCAAGTTTGACGAGGCAGTGGGTCTTTTGGAAACGATGGTGA
AGAACGACTCGTCCCCTTCCCTGGCCATCTTCAACATGGTGCTAGAGTCC
TGCTTGATCCAGAAGAGAGCTGAGCAAGCCGGCAAGTTTGACGAGGCAGT
GGGTCTTTTGGAAACGATGGTGAAGAACGACTCGTCCCCTTCCCTGGCCA
TCTTCAACATGGTGCTAGAGTCCTGCTTGATCCAGAAGAGAGCTGAGCAA
GTGCCTGGTGTGTTAGTAAAGATGCGACAGTGCGGGGTGCAGCCAAATGA
CGAGACGGATCGACTAGCAATGTTGGCCGTGGTGGCGGGGCGCGATTGGT
CTCAGGTGCCTGGTGTGTTAGTAAAGATGCGACAGTGCGGGGTGCAGCCA
AATGACGAGACGGATCGACTAGCAATGTTGGCCGTGGTGGCGGGGCGCGA
TTGGTCTCAGATCGTGGCCATGTGGAAAACTCTGACGAAGGGGGGAAATA
GGGTGCGAGGATTGAAACCCAAGGAGCTCCTGACAATCGCCAAAGCGCTT
GGCGGCCTCGGAGAGTGGAAAATGGTTTTACAAGTGCTTGACGTTTCGGC
GCTCGAGAGATACGATGGTCTCCCTCTATTGACCCTGGAAAGGTGCTTGA
ATGTGCTCGGTCGGGGGTGCCGATAAATCGTGGCCATGTGGAAAACTCTG
ACGAAGGGGGGAAATAGGGTGCGAGGATTGAAACCCAAGGAGCTCCTGAC
AATCGCCAAAGCGCTTGGCGGCCTCGGAGAGTGGAAAATGGTTTTACAAG
TGCTTGACGTTTCGGCGCTCGAGAGATACGATGGTCTCCCTCTATTGACC
CTGGAAAGGTGCTTGAATGTGCTCGGTCGGGGGTGCCGATAA back to top
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