mRNA_H-paniculata_contig5715.13266.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5715.13266.1
Unique NamemRNA_H-paniculata_contig5715.13266.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: D7G4Q4_ECTSI (Mtg2, mitochondrial Obg/CtgA-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q4_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 7.270e-101
Identity = 169/295 (57.29%), Postives = 202/295 (68.47%), Query Frame = 2
Query:  113 CSSGIGGSGXXXXXXASCVRHKTNGGVPRTKRKYEPGANKYQFVDKLRIVATGGKGGDGCISLEGESAIRKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPXXXXXXXXXXXXXGKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASS----GTPSEGRREAGWTEGMDSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGNLHVMSRNVGTKLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEYS 985
            C  G G  G      +  V ++  GG P  +R +      Y+FVDKLRI+A+GGKGGDGCISLEG++  RKRPSGGSGGAGG V+A+AD +LE+L S  HHFNG P             GKD Y+RVPCGTLVSEV++E+++  FH WA+A      G  S  +   G   G +SA +GD         + E   V+ VADLE  GD VLLA+GG PGLGNLHV SR VGTK+PGQRGESR+Y  ELRTIADVGL GYPNAGKSTLLGC+T+AKPKVA+YPFTTL+PVVG VEYS
Sbjct:   18 CHLGFGSPGCHAGVSSVLVLNRQAGGRPGKRRNHR---GDYKFVDKLRILASGGKGGDGCISLEGDNPTRKRPSGGSGGAGGNVYAIADGSLETLDSQLHHFNGQPGNAGGGSGKKGRTGKDAYIRVPCGTLVSEVVQEEEHYGFHPWALAGGIECGGEKSIAQGAEGEEGGEESAFDGDIYWGGDNGEEGEEEEVRYVADLEKDGDKVLLASGGKPGLGNLHVASRRVGTKIPGQRGESRHYRFELRTIADVGLVGYPNAGKSTLLGCITSAKPKVAMYPFTTLTPVVGHVEYS 309          
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: A0A6H5KQG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQG3_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 2.760e-61
Identity = 111/176 (63.07%), Postives = 132/176 (75.00%), Query Frame = 2
Query:  470 GKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASS----GTPSEGRREAGWTEGMDSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGNLHVMSRNVGTKLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEYS 985
            GKD Y+RVPCGTLVSEV++E++   FH WA+A      G  S  +   G   G +SA +GD+   + +  + E   V+ VADLE  GD VLLA+GG PGLGNLHV SR VGTK+PGQRGESR+Y  ELRTIADVGL GYPNAGKSTLLGC+T+AKPKVA+YPFTTL+PVVG VEYS
Sbjct:   17 GKDAYIRVPCGTLVSEVVQEEEKYGFHPWALAGGIECGGKKSIAQGAEGEEGGEESAFDGDSYWGE-DNHEEEEEEVRYVADLEKDGDKVLLASGGKPGLGNLHVASRRVGTKIPGQRGESRHYRFELRTIADVGLVGYPNAGKSTLLGCITSAKPKVAMYPFTTLTPVVGHVEYS 191          
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: A0A024FZD6_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024FZD6_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.480e-48
Identity = 112/280 (40.00%), Postives = 144/280 (51.43%), Query Frame = 2
Query:  173 HKTNGGVPRTKRKYEPGANKYQFVDKLRIVATGGKGGDGCISLEGESAIRKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPXXXXXXXXXXXXXGKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASSGTPSEGRREAGWTEGMDSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGNLHVMSRNV--GT--------KLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEY 982
            HK+    P+ +        K++FVD++RI   GG GG+GC S E + + RKRPSGG GGAGG V   AD  ++ L SS HHF G               G     RVPCGT+V++V++E               T   G  +   TE +++                       + DL+ HG+  + A GG PGLGN  ++SR    GT        K  GQ G S +Y LEL+TIADVGL GYPNAGKSTLL  L+ A PK+A YPFTTL P VG VE+
Sbjct:  122 HKSTQNKPKKR-------GKHRFVDRIRIKVVGGYGGNGCCSFEAKKSFRKRPSGGHGGAGGAVIVQADSAVQDLASSTHHFKGERGQNGKPNAGAGRCGSACIFRVPCGTIVNKVIRE---------------TIGTGCEDFDITERLEN-----------------------ICDLDRHGNQFVAAEGGKPGLGNRVLLSRTTTFGTLRNKMDEGKNLGQPGTSHHYELELKTIADVGLVGYPNAGKSTLLSRLSRASPKIAPYPFTTLHPFVGIVEF 356          
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: A0A0P1B492_PLAHL (Obg family gtpase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B492_PLAHL)

HSP 1 Score: 175 bits (444), Expect = 7.830e-48
Identity = 104/262 (39.69%), Postives = 135/262 (51.53%), Query Frame = 2
Query:  227 NKYQFVDKLRIVATGGKGGDGCISLEGESAIRKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPXXXXXXXXXXXXXGKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASSGTPSEGRREAGWTEGMDSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGNLHVMSRNVGT----------KLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEY 982
            +K +FVD++RI ATGG GG+GC S   ES  RKRP+GG GGAGG V   A+  +++L ++ HHF G               GK  Y++VPCGTLV  V + ++  D   + V                                         +++VADL+  G + L A GG PGLGN  +  +   +          K  G  G S+YY LEL+TIADVGL GYPNAGKSTLL  L+ A P +A YPFTTL P VG VE+
Sbjct:   82 SKRRFVDRIRIKATGGHGGNGCASFVAESTTRKRPNGGHGGAGGDVIIEANDKVQNLANATHHFKGESGTNGMPNDSAGKRGKYCYVKVPCGTLVKRVERYEREMDTGEYEVVD--------------------------------------RMEVVADLDKPGTTFLAAKGGKPGLGNRILAGKTTKSGRLRKLMPENKTRGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPAIAPYPFTTLHPYVGIVEF 305          
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: K3W6W2_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6W2_GLOUD)

HSP 1 Score: 173 bits (439), Expect = 1.060e-46
Identity = 105/262 (40.08%), Postives = 137/262 (52.29%), Query Frame = 2
Query:  227 NKYQFVDKLRIVATGGKGGDGCISLEGESAIRKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPXXXXXXXXXXXXXGKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASSGTPSEGRREAGWTEGMDSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGN--LHVMSRNVG--------TKLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEY 982
            +K +FVD++RI ATGG GG+GC S   ESA+RKRP+GG GGAGG V   AD  +++L ++ HHF G               GK  +++VPCGTLV  V + ++  +   + +                                         ++ V DL+  G + L A GG PGLGN  L   + N G         K  G  G S+YY LEL+TIADVGL GYPNAGKSTLL  L+ A P++A YPFTTL P VG VE+
Sbjct:  116 SKRRFVDRIRIKATGGHGGNGCASFFSESAMRKRPNGGHGGAGGNVVIEADDCIQNLANATHHFKGGAGLNGMPNDAAGRRGKHCFVKVPCGTLVKRVKRFERELENGEFEIVDK--------------------------------------METVCDLDQPGATFLAAIGGKPGLGNRILAGKTTNFGRLRKHMPDNKGVGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSTLSRATPEIAPYPFTTLHPYVGIVEF 339          
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: F0W392_9STRA (GTPase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W392_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.750e-46
Identity = 111/280 (39.64%), Postives = 139/280 (49.64%), Query Frame = 2
Query:  173 HKTNGGVPRTKRKYEPGANKYQFVDKLRIVATGGKGGDGCISLEGESAIRKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPXXXXXXXXXXXXXGKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASSGTPSEGRREAGWTEGMDSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGNLHVMSRNV--GT--------KLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEY 982
            HKT     +TK K      K++FVD++RI A GG GG+GC S   +++  KRPSGG GGAGG V   AD  ++ L SS HHF G               G     RVPCGT+V +V +E+   +   + V                                         ++ + DL+ HG   + A GG PGLGN  ++SR    GT        K  GQ G S +Y LEL+ IADVGL GYPNAGKSTLL  L+ A PKVA YPFTTL P VG VE+
Sbjct:  135 HKTT----QTKPKKH---GKHRFVDRIRIKAAGGYGGNGCCSFNAKNSFTKRPSGGHGGAGGAVIIQADSAVQDLASSTHHFKGGSGQNGKPNEGAGRCGSACIFRVPCGTIVKKVTREEIETECGDFDVFE--------------------------------------RLESIYDLDRHGSQFVAAEGGKPGLGNRVLLSRTTTFGTLKNKMDEGKNIGQPGTSNHYELELKIIADVGLVGYPNAGKSTLLSRLSRASPKVAPYPFTTLHPFVGIVEF 369          
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: A0A3R7ITC1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7ITC1_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.970e-46
Identity = 101/262 (38.55%), Postives = 134/262 (51.15%), Query Frame = 2
Query:  227 NKYQFVDKLRIVATGGKGGDGCISLEGESAIRKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPXXXXXXXXXXXXXGKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASSGTPSEGRREAGWTEGMDSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGNLHVMSRNVG----------TKLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEY 982
            +K +FVD++R+ ATGG GG+GC S   ESA RKRP+GG  GAGG V   A   +++L ++ HHF G               GK  Y++VPCGTLV  V + ++  +   + +                                         +++V DL+  G + L A GG PGLGN  +  +             TK  G  G S+YY LEL+TIADVGL GYPNAGKSTLL  L+ A P++A YPFTTL P VG VE+
Sbjct:   97 SKRRFVDRIRVKATGGHGGNGCASFFSESATRKRPNGGXXGAGGDVVIEASGKMQNLANATHHFKGGAGLNGMSNDAAGRRGKHCYVKVPCGTLVKRVERYERELENGEYEIVDQ--------------------------------------MEVVCDLDKPGSTFLAAQGGKPGLGNRILAGKTTKFGRLRKHMPETKGTGHPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEF 320          
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: A0A8K1FEH5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEH5_PYTOL)

HSP 1 Score: 168 bits (425), Expect = 1.350e-44
Identity = 109/299 (36.45%), Postives = 144/299 (48.16%), Query Frame = 2
Query:  119 SGIGGSGXXXXXXASCVRH-KTNGGVPRTKRKYEPGANKYQFVDKLRIVATGGKGGDGCISLEGESAIRKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPXXXXXXXXXXXXXGKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASSGTPSEGRREAGWTEGMDSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGN--LHVMSRNVGT--------KLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEY 982
            +G+G  G           H K    V R K       +K +FVD++RI ATGG GG+GC S   ESA+R+RP+G    AGG V   AD  +++L ++ HHF G               GKD  ++VPCGT++  V + ++  D   + +     P                                      V DL+ HG + + A GG PGLGN  L   + N G         K  G  G S+YY LEL+TIADVGL GYPNAGKSTLL  L+ A P++A YPFTTL P VG V++
Sbjct:   94 NGVGAEGFAAQTKRKVEEHVKQKVSVRRAKH------SKRRFVDRIRIKATGGHGGNGCASFFSESALRRRPNGXXXXAGGNVIIQADHRIQNLANATHHFKGGSGLNGMPNDAAGRRGKDCIVKVPCGTIIKRVDRYERDLDDGDFEIVDRMHP--------------------------------------VCDLDQHGTTFMAATGGKPGLGNRILAGKTTNFGRLRKYMPEGKGTGHPGTSQYYELELKTIADVGLVGYPNAGKSTLLSRLSRATPEIAPYPFTTLHPFVGIVDF 348          
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: A0A7S3M2T8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2T8_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.660e-44
Identity = 111/278 (39.93%), Postives = 143/278 (51.44%), Query Frame = 2
Query:  209 KYEPGANKYQFVDKLRIVATGGKGGDGCISLEGESAIRKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPXXXXXXXXXXXXXGKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASSGTPSEGRREAGWTEGMDSAGEGDNER----PKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGNLHVMSRNVG---------------TKLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEYS 985
            +Y  G    +F D+ +I   GGKGG+GC+S E  S  RKR SGGSGG GG VF   D  + SL    +HFNG               G+DVY++VP GT++SE   +++ D+             E   +A   EG   + EGDN      P+ EE   +         +++     L+A GG  G+GN  +M    G               T +PGQ GESR   LEL+ IADVGL G+PNAGKS+LL  L+NA PKVA Y FTTL P VG VEYS
Sbjct:   40 EYLDGHTAQRFADRAQIEVHGGKGGNGCVSHEILSPGRKRASGGSGGKGGNVFIQGDPNMFSLKFETYHFNGGNGRHGGSAGLTGRSGEDVYIKVPLGTIISERFPDEEDDEEDLSMYDDEEIFDESDLDATEEEGEGESEEGDNNGWELLPEGEEPVEDRSQGPEPVHIDNPRVVYLVARGGAAGIGNKMMMKSKNGSEAGGTNQQLQSMPKTYIPGQHGESRSLVLELKIIADVGLVGFPNAGKSSLLRALSNAVPKVASYRFTTLHPSVGVVEYS 317          
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Match: A0A484DR68_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DR68_BRELC)

HSP 1 Score: 165 bits (418), Expect = 7.380e-44
Identity = 107/265 (40.38%), Postives = 139/265 (52.45%), Query Frame = 2
Query:  227 NKYQFVDKLRIVATGGKGGDGCISLEGESAIRKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPXXXXXXXXXXXXXGKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASSGTPSEGRREAGWTEGMDSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGNLHV-------------MSRNVGTKLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNAKPKVALYPFTTLSPVVGQVEY 982
            +K +FVD++R+ ATGG GG+GC S   ESA RKRP+     AGG V   A   +++L ++ HHF G               GK  +L+VPCGTLV  V   ++Y+  H               E+G  E +D                     +++VADL+  G + L A+GG PGLGN  +             M  N  T LPG    S+YY LEL+TIADVGL GYPNAGKSTLL  L+ A P++A YPFTTL P VG VE+
Sbjct:   82 SKRRFVDRIRVKATGGHGGNGCASFFSESATRKRPNXXXXXAGGDVVIEASAQMQNLANATHHFKGGSGTNGMPNDAAGRRGKHCFLKVPCGTLVKRV---ERYEREH---------------ESGEFEIVDK--------------------MEIVADLDKPGTTFLAASGGKPGLGNRILAGKTTMFGQLRKHMPENKTTGLPGT---SQYYELELKTIADVGLVGYPNAGKSTLLSVLSCATPEIAPYPFTTLHPYVGIVEF 305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5715.13266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q4_ECTSI7.270e-10157.29Mtg2, mitochondrial Obg/CtgA-like GTPase n=1 Tax=E... [more]
A0A6H5KQG3_9PHAE2.760e-6163.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024FZD6_9STRA2.480e-4840.00Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
A0A0P1B492_PLAHL7.830e-4839.69Obg family gtpase n=1 Tax=Plasmopara halstedii Tax... [more]
K3W6W2_GLOUD1.060e-4640.08Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
F0W392_9STRA1.750e-4639.64GTPase putative n=1 Tax=Albugo laibachii Nc14 TaxI... [more]
A0A3R7ITC1_9STRA3.970e-4638.55Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A8K1FEH5_PYTOL1.350e-4436.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3M2T8_9STRA1.660e-4439.93Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A484DR68_BRELC7.380e-4440.38Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5715contigH-paniculata_contig5715:302..5190 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.7
Seed ortholog evalue5e-83
Seed eggNOG ortholog2880.D7G4Q4
Preferred nameMTG2
KEGG koko:K03979,ko:K10277,ko:K15334
Hectar predicted targeting categorymitochondrion
GOsGO:0000166,GO:0000313,GO:0001882,GO:0001883,GO:0002181,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019222,GO:0019538,GO:0019866,GO:0019898,GO:0031090,GO:0031312,GO:0031314,GO:0031323,GO:0031326,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032268,GO:0032543,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0043021,GO:0043022,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043576,GO:0043603,GO:0043604,GO:0044057,GO:0044065,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051239,GO:0051246,GO:0060255,GO:0065007,GO:0070013,GO:0070129,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:0098798,GO:0140053,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112
EggNOG free text desc.GTP-binding protein
EggNOG OGsCOG0536@1,KOG1489@2759
Ec32 ortholog descriptionMtg2, mitochondrial Obg/CtgA-like GTPase
Ec32 orthologEc-20_000780.1
EC1.14.11.27,2.1.1.202
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03016,ko03036
Exons7
Model size985
Cds size966
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5715.13266.1prot_H-paniculata_contig5715.13266.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5715 302..5171 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930614.495068-CDS-H-paniculata_contig5715:301..4931622930614.495068-CDS-H-paniculata_contig5715:301..493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 302..493 -
1691481373.174761-CDS-H-paniculata_contig5715:301..4931691481373.174761-CDS-H-paniculata_contig5715:301..493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 302..493 -
1622930614.5180233-CDS-H-paniculata_contig5715:836..9651622930614.5180233-CDS-H-paniculata_contig5715:836..965Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 837..965 -
1691481373.1847897-CDS-H-paniculata_contig5715:836..9651691481373.1847897-CDS-H-paniculata_contig5715:836..965Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 837..965 -
1622930614.53405-CDS-H-paniculata_contig5715:1600..17381622930614.53405-CDS-H-paniculata_contig5715:1600..1738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 1601..1738 -
1691481373.192405-CDS-H-paniculata_contig5715:1600..17381691481373.192405-CDS-H-paniculata_contig5715:1600..1738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 1601..1738 -
1622930614.546794-CDS-H-paniculata_contig5715:2176..22561622930614.546794-CDS-H-paniculata_contig5715:2176..2256Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 2177..2256 -
1691481373.2003977-CDS-H-paniculata_contig5715:2176..22561691481373.2003977-CDS-H-paniculata_contig5715:2176..2256Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 2177..2256 -
1622930614.560594-CDS-H-paniculata_contig5715:2687..28281622930614.560594-CDS-H-paniculata_contig5715:2687..2828Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 2688..2828 -
1691481373.210309-CDS-H-paniculata_contig5715:2687..28281691481373.210309-CDS-H-paniculata_contig5715:2687..2828Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 2688..2828 -
1622930614.5738597-CDS-H-paniculata_contig5715:4095..41621622930614.5738597-CDS-H-paniculata_contig5715:4095..4162Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 4096..4162 -
1691481373.2183814-CDS-H-paniculata_contig5715:4095..41621691481373.2183814-CDS-H-paniculata_contig5715:4095..4162Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 4096..4162 -
1622930614.5853343-CDS-H-paniculata_contig5715:4952..51711622930614.5853343-CDS-H-paniculata_contig5715:4952..5171Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 4953..5171 -
1691481373.2269533-CDS-H-paniculata_contig5715:4952..51711691481373.2269533-CDS-H-paniculata_contig5715:4952..5171Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5715 4953..5171 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930614.5989661-UTR-H-paniculata_contig5715:5171..51901622930614.5989661-UTR-H-paniculata_contig5715:5171..5190Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5715 5172..5190 -
1691481373.2348444-UTR-H-paniculata_contig5715:5171..51901691481373.2348444-UTR-H-paniculata_contig5715:5171..5190Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5715 5172..5190 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5715.13266.1

>prot_H-paniculata_contig5715.13266.1 ID=prot_H-paniculata_contig5715.13266.1|Name=mRNA_H-paniculata_contig5715.13266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp
MLLLGRRCVVHTSLLPLRRISPYLPSLVDGHCSSGIGGSGGAAAAAASCV
RHKTNGGVPRTKRKYEPGANKYQFVDKLRIVATGGKGGDGCISLEGESAI
RKRPSGGSGGAGGRVFAVADKTLESLHSSEHHFNGAPGGQGGGAGKKGRR
GKDVYLRVPCGTLVSEVMKEDKYDDFHSWAVASSGTPSEGRREAGWTEGM
DSAGEGDNERPKAEETDHEGYTVKLVADLEDHGDSVLLANGGVPGLGNLH
VMSRNVGTKLPGQRGESRYYSLELRTIADVGLAGYPNAGKSTLLGCLTNA
KPKVALYPFTTLSPVVGQVEYS
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mRNA from alignment at H-paniculata_contig5715:302..5190-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5715.13266.1 ID=mRNA_H-paniculata_contig5715.13266.1|Name=mRNA_H-paniculata_contig5715.13266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4889bp|location=Sequence derived from alignment at H-paniculata_contig5715:302..5190- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGATACCTCTGGGGTGGTGATGCTGCTGCTCGGTCGCAGATGTGTAGTTC ATACCAGCCTACTTCCTTTAAGGAGGATTTCTCCATATTTACCCTCGTTG GTCGATGGGCATTGTAGCAGTGGAATTGGAGGTTCTGGTGGTGCTGCTGC CGCTGCTGCTTCTTGTGTCCGCCACAAAACGAACGGGGGGGTGCCTCGAA CAAAACGGAAATACGAGCCAGGCGCGAACAAGTACCAGGTAAATTACACG GTGCATGGTGCGGTATCATATGGTAGTAGATCGCCTCTGTGCGTCCCGAC TGCCTGGAACAATAGCTCTGGAATTGTTGGAGGTTTTCCTCTCTGCGTCG CAGTAGTAGAGGCCTGAGAAGATACGGTGAGGTCTGGTGTGATAAGGATC ATGTATCCCAATACCCAGTATCGCGGAGCATCGCTGTTCTCTTTTGACCC GTGTGTTCTGTGACACGATATGTACTGCCTGTCGAATGTGTGAGATGTGG GACAGTTTCATGAGATGGGATGCGGTACGAAACGCACAGGCGTCGAGTAG AGTTAACATGTACCCCTTCTACCCAACCGGCAAACTCTAAGTGACCACCC TTGAGTTTGTTCAGTTTATGGATAAATAATTCACACCTCGGACGAAGGTC CTTCATCCGTCGATGAAGGATGTCGCAGGTTTTGGAACTATACCAGCAAG AGAATACCTGGTGCCTTCCGAAACCCATAAATCGATAGCATGGATACCCT GCACACATTCGAAGAGTGTTCGACCTCTGAGTACTAGCGCACCTCCCCAG ATGTTTCTACTTTTGAGCATGAAGGGATGACGGTTCAGTTGCGTGTTAAT TACTTGAAAATTAAACCTTAGTCCGAGCTGTGAAATTATTCAGTTTTCTA CGGTACTGCAAGTTGTGAATCCCTTCTTGTACTTTTGATATGCTCTTTAC TCTATGGTACTTTATCCAAACCCCACCCCCTGTGCCCGTTGCTCTGGGTT CCCGTTGTTGTACATTGTTCTCCCACAGTTTGTAGACAAACTTCGTATCG TTGCTACTGGCGGTAAGGGCGGCGACGGCTGCATCAGCCTTGAAGGTGAA TGGTGAATATTTCATCTGTAGGGGGTGTGGCACGGTTATTCTAGTGTACA TCGGTGTTCTCTCCTCACCTACTGTCTGTATACACCTGACTGTACCCAAT CTATAGTACTTCAGGAGACTCCATGAACGGAGCTCCGAGGATCTGGTGTA ATTGCGGCATATCGCAATGTAAGCAAAATGGACGCCAAGTTTTTGTCGTT AACCTCGATGCGATACGAGTATGATCCAGCAGGACAGGAGAGTATTCTAC GCTTGGTTCGATTTTGTAAAGGCGGATGGCCAAAATAAGATATACCTGTA CATTGGTGTGTTCCAGCCGTTCAAAGGCAAAGGAGAGGTAAGCTGAGCAT GTGGGGGTGTTGCACACGCTCTGCCACGTCAGCTTGGTCAGATGGAATCA GCTTGCCAACAGGTGGGCCTGTCTAGTGCTCTCGATGGAAAGCCCAATAG AAACGGCCCGTGTAGGGATGGTTTCAAATCGCTTGTTTCAAAATGCTAAG GAAAAATCCCGGGTTGGCCAGGAAAAGATGCTAAATTGGCCAACGCAGGA GATACCCTCAGCCGAAAAAAGGATAAGCCCAATCTTTTCAGAAAATATCC GCTGCGCCTTCAGCAAGTGTGTTCAATCCAAGCGAAGTTGGCTTTGAGGT AGAAGCATCCATTAGGAAGTGAGCGGGTACAAGGCAATTACTGCTTCTTT TCGCGGGAAAAGAGTGGTGGTGTGGTCTCGCAGGTGTCGTTGACCTCCCT GATCGAGAACATGTTGTTTCGAGTGCGCAAAGCGCACGTACCAGGGGTTC CTCGCAGCGGCCGTGGGCGGTACCCTTGAAAGGCACAACTTTTTTTGGCT GTTGACTGTCTAAAAATTGCTCCAAGTGGCTGTGTAGCTTTAATTTTTAT AACTGTTCAAACATATTCGAGCGCGCAACAAGACGGTCCTTTGCGCTCTA CGTTACGCGGTACTATAAGCAGTCGAGGCCAGCATACCCGGACCCTTTGG GCGCGGGACCAAATAGTCAAGTCATTGCATCTTTTTCTCACGTCACATCA CATGTATTGCTGATAACACGCCATCAGCTATGCTACGCTATAGTACAGAC AGGACGCGCTTACCGGGACAATTTGCCACGCTGCCTTACTTGGTATTACA GGTACGGCAAATGGGCGAGACACCCTTCTTCCATGTAGCACACGCACCAG AGATTACATCGCTCTAAACCCTGCACTACCTGTTACCGCATGCAAATACT GTACAACGACAGGGGAGAGTGCCATCAGGAAGCGGCCATCTGGTGGTTCG GGAGGGGCCGGCGGGCGCGTCTTCGCTGTTGCAGACAAAACATTGGAGTC ATTGCATTCTTCGGAGCATCACTTCAATGGAGCGCCCGGAGGACAGGGAG GGGGTACGTGCTTCGTGCTGTAGTGTCATACTTTGGTGAAGTTGGGGGTG ACTGGCATTTTTTTTCTCTGAATAGTATGGCCATCGTGCGTGTAGTCCTT GCCGTTCCCGGAGCATGAAGCAAACGGCCTGGGACGACGGGCGGAGGTGC TTATGGTCATACTCTAATGTCTTACAACACTCTGGTGGGATTGGGCGAGG GGTTTTTATGTCACGCCCTGTAAGGTACGGTGAATATATTTTGTGTGTGC ACAATGCTTGTAGGTGGTGCTTGCATTCGAGGTGTCGCATTCTTCTTTCT CGTGTCTTTCGTGATGTAAGGTTTCATGGGGTGCTTTTCTACGCTCTCCG GCCTCTTGTGGCCATTTTTTCTCCTCATCTGTGATGAAAGTCTTGTCTTG TCTTGTCTTGTGTTTGCTTTGCTTCGGTCCTCAGGGGCTGGCAAGAAAGG CAGGAGGGGCAAGGACGTGTACCTTCGAGTACCATGCGGTACTCTCGTGT CGGAAGTGATGAAGGTGCGGACGTGCCATGCGCCATATCTTAGCTCTACA TGGGTGCAATATCGAAAACAAGAGCACAATGTTTTACAGTGTACCGCTGC TATATCACGAAACATTACGCAACATTGTAGGTTTGTGAAACTTGACACTT GTCAGCTGCCACAAGGAAAAAAATAATCCCGATAGTATACTGCTGTTGTT TGGTTTTTGTTTACCCATGCTCTCCCGTCAAAAGTTGTAACTGCTAAATT GAACCTTGATGGGAAAAAATAGTAGGTACTGTAGGTACACACATAAAGAA TAAGTGTATTACATCCATCTCTCGCGTGTCACAGGAGTGCGTTAGATCGT CCCGATTTTCACACCGTCCCCAGGTTTTGCGGGAAAAAAAATGCACCCGA ACCGAACGAAACATGCCACTCTCTTCTGTTACGGTATCGAAACATCAAGA AGGAGGATAAATATGATGACTTCCACTCCTGGGCTGTGGCCTCTAGCGGC ACGCCAAGCGAGGGGAGGCGAGAGGCCGGCTGGACGGAGGGCATGGATAG TGCTGGCGAGGGGGACAACGAGCGACCAAAGGCCGAAGAGGTGGGACGAG ATGAAGCAGAGGAGGAGTGGGACGCGTTGGTCGGTGGTGGTTGGAGCGAT GATGAGGGAGGCGAAGACCAGGACAGTGATGATGAAGAGGGGCAGGATAA TGACGGGTACACGCAGGTGTTTTTTTGTTGTTGTCAACATGGTGGAAAAC GTTGGTTTTGTTTTTCAAAGCGGGTGGTTCGTAGAAATATGTACGATTGT TGGGTCGCGTAGCTTACACGTTATGAATTAAAAAACGGTGTTTTTTTTTC AATATTATTTGCCGCGTTTATGTGAGTTTGCTCATCGTGACGAGCTATGT ACGATAAAACGGCCATGCACAGAACGGCAGAGCCTCGAAAACGCTACACT GCTGTCTGTCTATGCCTATTTGTTCTGCCATTATGCATACCGTATTTAGA GCGTGAGCGAATTTTACCTTGCGAATCACCTAGATTCGTTGCGGATATTA CCAATCAAGATGACACTTGACTTGTTACACGAACAAGATCACGTCATTCT GCTAAAAAACACAACCATCTTACGTTGCGCTACGTACACTGACACTGACA GAAGCCATATCTTGGGAGTTGTAGTCAACCAGGACTATGCTGTGTCTGGG GTTCGCATGTTTTTCCCAGGACGAGACGGACCACGAAGGGTACACGGTAA AGCTTGTGGCCGACTTGGAGGATCACGGGGATAGCGTACTGTTGGCAAAC GGTGGGGTTCCTGGATTGGGAAACCTTCACGTCATGTCACGCAATGTGGG GACGGTAAGTCATGGGGCGCTTGGTTCGTCTTCTTGCTTGTGATTTTGGC GGAGCGCCGAAGAAGGTAGAGAGGTACTGGCAGCGGTTTCCAAGAAGACT TTGGTATGCTATCGTTCATGTGCGGATCTGCATGTATCGATTATTAGAAT GTACATGTGCATACGATGGTGTACGTCCGCGCCAGTTGTGTGGTCTGTGC GTCGATATGCCTGTCTTGGTGCCGAAACCTGTGTACTGCATTTGAACCCT CGATTCTTACTAGACGTCGAGCCAAAGCGTATAAAATGCCGCATGCCTCT GCTTTCAAACGTCCCGGTGATTGTCTATTTCTCATGAATTATGATAGAAA CTGCCTGGGCAACGAGGCGAGAGTCGCTACTATTCGCTGGAGCTACGAAC AATAGCAGACGTGGGGCTCGCCGGCTATCCCAACGCGGGCAAGTCCACCC TGCTGGGATGTCTCACGAACGCCAAACCTAAGGTGGCCTTGTACCCCTTT ACTACGCTCAGCCCAGTGGTGGGGCAGGTTGAGTACTCG
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Coding sequence (CDS) from alignment at H-paniculata_contig5715:302..5190-

>mRNA_H-paniculata_contig5715.13266.1 ID=mRNA_H-paniculata_contig5715.13266.1|Name=mRNA_H-paniculata_contig5715.13266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig5715:302..5190- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGCTGCTCGGTCGCAGATGTGTAGTTCATACCAGCCTACTTCCTTT
AAGGAGGATTTCTCCATATTTACCCTCGTTGGTCGATGGGCATTGTAGCA
GTGGAATTGGAGGTTCTGGTGGTGCTGCTGCCGCTGCTGCTTCTTGTGTC
CGCCACAAAACGAACGGGGGGGTGCCTCGAACAAAACGGAAATACGAGCC
AGGCGCGAACAAGTACCAGATGCTGCTGCTCGGTCGCAGATGTGTAGTTC
ATACCAGCCTACTTCCTTTAAGGAGGATTTCTCCATATTTACCCTCGTTG
GTCGATGGGCATTGTAGCAGTGGAATTGGAGGTTCTGGTGGTGCTGCTGC
CGCTGCTGCTTCTTGTGTCCGCCACAAAACGAACGGGGGGGTGCCTCGAA
CAAAACGGAAATACGAGCCAGGCGCGAACAAGTACCAGTTTGTAGACAAA
CTTCGTATCGTTGCTACTGGCGGTAAGGGCGGCGACGGCTGCATCAGCCT
TGAAGTTTGTAGACAAACTTCGTATCGTTGCTACTGGCGGTAAGGGCGGC
GACGGCTGCATCAGCCTTGAAGGGGAGAGTGCCATCAGGAAGCGGCCATC
TGGTGGTTCGGGAGGGGCCGGCGGGCGCGTCTTCGCTGTTGCAGACAAAA
CATTGGAGTCATTGCATTCTTCGGAGCATCACTTCAATGGAGCGCCCGGA
GGACAGGGAGGGGGGGAGAGTGCCATCAGGAAGCGGCCATCTGGTGGTTC
GGGAGGGGCCGGCGGGCGCGTCTTCGCTGTTGCAGACAAAACATTGGAGT
CATTGCATTCTTCGGAGCATCACTTCAATGGAGCGCCCGGAGGACAGGGA
GGGGGGGCTGGCAAGAAAGGCAGGAGGGGCAAGGACGTGTACCTTCGAGT
ACCATGCGGTACTCTCGTGTCGGAAGTGATGAAGGGGCTGGCAAGAAAGG
CAGGAGGGGCAAGGACGTGTACCTTCGAGTACCATGCGGTACTCTCGTGT
CGGAAGTGATGAAGGAGGATAAATATGATGACTTCCACTCCTGGGCTGTG
GCCTCTAGCGGCACGCCAAGCGAGGGGAGGCGAGAGGCCGGCTGGACGGA
GGGCATGGATAGTGCTGGCGAGGGGGACAACGAGCGACCAAAGGCCGAAG
AGGAGGATAAATATGATGACTTCCACTCCTGGGCTGTGGCCTCTAGCGGC
ACGCCAAGCGAGGGGAGGCGAGAGGCCGGCTGGACGGAGGGCATGGATAG
TGCTGGCGAGGGGGACAACGAGCGACCAAAGGCCGAAGAGACGGACCACG
AAGGGTACACGGTAAAGCTTGTGGCCGACTTGGAGGATCACGGGGATAGC
GTACTGTTGGCAAACGGTGGGGTTCCTGGATTGGGAAACCTTCACGTCAT
GTCACGCAATGTGGGGACGACGGACCACGAAGGGTACACGGTAAAGCTTG
TGGCCGACTTGGAGGATCACGGGGATAGCGTACTGTTGGCAAACGGTGGG
GTTCCTGGATTGGGAAACCTTCACGTCATGTCACGCAATGTGGGGACGAA
ACTGCCTGGGCAACGAGGCGAGAGTCGCTACTATTCGCTGGAGCTACGAA
CAATAGCAGACGTGGGGCTCGCCGGCTATCCCAACGCGGGCAAGTCCACC
CTGCTGGGATGTCTCACGAACGCCAAACCTAAGGTGGCCTTGTACCCCTT
TACTACGCTCAGCCCAGTGGTGGGGCAGGTTGAGTACTCGAAACTGCCTG
GGCAACGAGGCGAGAGTCGCTACTATTCGCTGGAGCTACGAACAATAGCA
GACGTGGGGCTCGCCGGCTATCCCAACGCGGGCAAGTCCACCCTGCTGGG
ATGTCTCACGAACGCCAAACCTAAGGTGGCCTTGTACCCCTTTACTACGC
TCAGCCCAGTGGTGGGGCAGGTTGAGTACTCG
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