mRNA_H-paniculata_contig5710.13262.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: A0A6H5L3H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H7_9PHAE) HSP 1 Score: 205 bits (521), Expect = 2.210e-64 Identity = 105/145 (72.41%), Postives = 118/145 (81.38%), Query Frame = 1
Query: 7 STALFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGV------CPRDTEFEAAAIDIFESRT-GSDKFKVKVLDVIDYCCEQPEIRSWLDFFDDAAEENVVGDA 420
STALFKLLDTDNNGL+DAIEFV +AC SGMS T+TL FVL CYDFDGTGRLTIDEI+LAFKSTVTGMCKLEG GV CPRD +FEAAA++ FE R GSD+FKVK+ +VID+C EQPEIRSWLD+FDD AEE + A
Sbjct: 70 STALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLSCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGVDAGLKACPRDIDFEAAAMNAFERRAEGSDRFKVKMREVIDFCEEQPEIRSWLDYFDDPAEEEALAAA 214
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI) HSP 1 Score: 204 bits (519), Expect = 3.390e-58 Identity = 104/145 (71.72%), Postives = 117/145 (80.69%), Query Frame = 1
Query: 7 STALFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGV------CPRDTEFEAAAIDIFESRT-GSDKFKVKVLDVIDYCCEQPEIRSWLDFFDDAAEENVVGDA 420
STALFKLLDTDNNGL+DAIEFV +AC SGMS T+TL FVL CYDFDGTGRLTIDEI+LAFKSTVTGMCKLEG G CPRD +FEAAA++ FE R GSD+FKVK+ +VID+C EQPEIRSWLD+FDD AEE + A
Sbjct: 68 STALFKLLDTDNNGLIDAIEFVSAMACASGMSVTDTLEFVLNCYDFDGTGRLTIDEISLAFKSTVTGMCKLEGTGAGADAGLKACPRDVDFEAAAMNAFERRAEGSDRFKVKMREVIDFCQEQPEIRSWLDYFDDPAEEEALAAA 212
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: F0YHF1_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF1_AURAN) HSP 1 Score: 125 bits (314), Expect = 1.360e-30 Identity = 68/143 (47.55%), Postives = 88/143 (61.54%), Query Frame = 1
Query: 13 ALFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGVCPRDTEFEAAAIDIFES-----RTGSDK------------FKVKVLDVIDYCCEQPEIRSWLDFFDD 390
ALF +D+D N LVDAIEFV TLA TSGMSA + L FV C+DFDG G+L++DEITLAF+ T+ G+CKL G +CP + E E A+ F + + G D K+++LD I +C PE SWL+FFDD
Sbjct: 67 ALFIRMDSDENALVDAIEFVSTLAMTSGMSAHDKLEFVFTCFDFDGAGQLSVDEITLAFRCTLMGLCKLTGQ---ICPCEEELEVVAMRAFAAVNPSYKDGKDSEHPVDINTSLALAKLRILDAISFCLSDPEALSWLEFFDD 206
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: A0A7S3JT59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT59_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.680e-29 Identity = 59/134 (44.03%), Postives = 84/134 (62.69%), Query Frame = 1
Query: 16 LFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGVCPRDTEFEAAAIDIF------ESRTGSDKFKVKVLDVIDYCCEQPEIRSWLDFFDDAAE 399
LFK LDTD NGL+DA+E +C LA SGMS+ + L F+L C+DFDGT RL++DE+TLA + ++ G+CKL + P + E E AI ++ T S + + + +++ Y PE +WLDFFDD AE
Sbjct: 84 LFKRLDTDENGLIDALEMLCGLAVASGMSSGQKLSFLLRCFDFDGTSRLSVDEVTLALRCSLVGVCKLAIVGEAIPPTEDELEIIAIRALAYCQTEKTTTESIQSRAAISELVQYLLIDPEAVTWLDFFDDVAE 217
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: D0NLT0_PHYIT (Microtubule-associated protein, putative n=22 Tax=Phytophthora TaxID=4783 RepID=D0NLT0_PHYIT) HSP 1 Score: 119 bits (297), Expect = 2.650e-28 Identity = 67/145 (46.21%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 1 QRSTALFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGVCPRDTEFEAAAIDIFES--RTGSDKFKVKVLDVIDYCCEQPEIRSWLDFFDDAAEENVVGDAEDA 429
Q S ALF LDTD NGLVDA+EF+ T+A TS M + L FV CYDF+ TG+L++DE+TLAFKST+TG+CKL GG + CP + E A F+ + G D F + + + + + PE+ SW+D+FD AE D +D+
Sbjct: 67 QLSGALFTALDTDENGLVDALEFLGTMAMTSAMPIPQKLTFVYNCYDFNETGQLSLDELTLAFKSTLTGLCKLCGGLS--CPTELVLEDLAQHAFQKAQKPGVDAF-LSLSEFLRFADTTPEVNSWVDYFDCPAETVDEQDGDDS 208
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: A0A397CRK0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CRK0_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.460e-26 Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 16 LFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGVCPRDTEFEAAAIDIFESRTGSDKFKVKVLDVIDYCCEQPEIRSWLDFFD---DAAEENVVGDAE 423
LF +DTD NGLVDA+EF+ LA S M+ + + FV CYDF+ +G +TIDE+TLA KST+TG+CKL GR+ CP + E A+ F + + + I YC PE+ +W+ FFD D ++E + D++
Sbjct: 60 LFDAMDTDENGLVDALEFLGALALLSAMTIPQKITFVYNCYDFNESGEITIDELTLAMKSTLTGLCKLSIGRS--CPTELVLEEIALFAFRKAGKHPDKCITLPEYIKYCETTPEVNTWVYFFDAPQDLSDEYDLADSD 196
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: A0A024TA71_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TA71_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.550e-26 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = 1
Query: 16 LFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGVCPRDTEFEAAAIDIFESRTGSDKFKVKVLDVIDYCCEQPEIRSWLDFFD---DAAEENVVGDAE 423
LF +DTD NGLVDA+EF+ LA S M+ + + FV CYDF+ +G +TIDE+TLA KST+TG+CKL GR+ CP + E A+ F + + + I YC PE+ +W+ FFD D ++E+ +GD++
Sbjct: 72 LFDAMDTDENGLVDALEFLGALALLSAMTIPQKITFVYNCYDFNESGEITIDELTLAMKSTLTGLCKLSIGRS--CPTELVLEEIALFAFRKAGKHPDKCITLPEYIKYCETTPEVNTWVCFFDAPRDLSDEHDIGDSD 208
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: A0A6A4ZRG4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZRG4_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.850e-26 Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 16 LFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGVCPRDTEFEAAAIDIFESRTGSDKFKVKVLDVIDYCCEQPEIRSWLDFFD---DAAEENVVGDAE 423
LF +DTD NGLVDA+EF+ LA S M+ + + FV CYDF+ +G +TIDE+TLA KST+TG+CKL GR+ CP + E A+ F + + + I YC PE+ +W+ FFD D ++E + D++
Sbjct: 72 LFDAMDTDENGLVDALEFLGALALLSAMTIPQKITFVYNCYDFNESGEITIDELTLAMKSTLTGLCKLSIGRS--CPTELVLEEIALFAFRKAGKHPDKCITLPEYIKYCETTPEVNTWVYFFDAPQDLSDEYDLADSD 208
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: A0A397F5N2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F5N2_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.970e-26 Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 16 LFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGVCPRDTEFEAAAIDIFESRTGSDKFKVKVLDVIDYCCEQPEIRSWLDFFD---DAAEENVVGDAE 423
LF +DTD NGLVDA+EF+ LA S M+ + + FV CYDF+ +G +TIDE+TLA KST+TG+CKL GR+ CP + E A+ F + + + I YC PE+ +W+ FFD D ++E + D++
Sbjct: 99 LFDAMDTDENGLVDALEFLGALALLSAMTIPQKITFVYNCYDFNESGEITIDELTLAMKSTLTGLCKLSIGRS--CPTELVLEEIALFAFRKAGKHPDKCITLPEYIKYCETTPEVNTWVYFFDAPQDLSDEYDLADSD 235
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Match: A0A418ALB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ALB5_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.630e-26 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = 1
Query: 16 LFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGTGRLTIDEITLAFKSTVTGMCKLEGGRNGVCPRDTEFEAAAIDIFESRTGSDKFKVKVLDVIDYCCEQPEIRSWLDFFD---DAAEENVVGDAE 423
LF +DTD NGLVDA+EF+ LA S M+ + + FV CYDF+ +G +TIDE+TLA KST+TG+CKL GR+ CP + E A+ F + + + I YC PE+ +W+ FFD D ++E+ +GD++
Sbjct: 8 LFDAMDTDENGLVDALEFLGALALLSAMTIPQKITFVYNCYDFNESGEITIDELTLAMKSTLTGLCKLSIGRS--CPTELVLEEIALFAFRKAGKHPDKCITLPEYIKYCETTPEVNTWVCFFDAPRDLSDEHDIGDSD 144 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5710.13262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5710.13262.1 >prot_H-paniculata_contig5710.13262.1 ID=prot_H-paniculata_contig5710.13262.1|Name=mRNA_H-paniculata_contig5710.13262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp QRSTALFKLLDTDNNGLVDAIEFVCTLACTSGMSATETLGFVLGCYDFDGback to top mRNA from alignment at H-paniculata_contig5710:11674..13037- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5710.13262.1 ID=mRNA_H-paniculata_contig5710.13262.1|Name=mRNA_H-paniculata_contig5710.13262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1364bp|location=Sequence derived from alignment at H-paniculata_contig5710:11674..13037- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5710:11674..13037- >mRNA_H-paniculata_contig5710.13262.1 ID=mRNA_H-paniculata_contig5710.13262.1|Name=mRNA_H-paniculata_contig5710.13262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig5710:11674..13037- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |