mRNA_H-paniculata_contig5674.13211.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI) HSP 1 Score: 197 bits (500), Expect = 4.440e-51 Identity = 131/306 (42.81%), Postives = 170/306 (55.56%), Query Frame = 1
Query: 1246 GKCPGESISATGLPPCTACPEGLWAQSGTTFCTDAALRGLGLPEALANAMTEDAVGGFAGPGDVDIDGEIILGWNQMFVLDEEDAGTLHVSGRFFRDDPDATIPASIALFLYLENEDTPDDFVRGRAEIDASTGTFTATFTDIPPKYSKLYLSFVVMDLADAAGPDERVQNSVFSLNVINEGCSKAMRVTLEWDGN-DDINLWVTEPGGTRLSSYTESKIGDFGYLNIRNGGGWTAGNPDL-GFEGGREEYVVFSG--QTGDAMLGEYTFSVKPSYSPSGVT--WTLTALVGDAVVWSETGSFESS 2145
G C S S+TG PPCT CP+G + +G T C L GL LPE +A AM DA+GGFAGPG + L EED G++ +SG F RDD A +P+S ++F+Y EN PDDFVRG+ +D STG F+ TDIP S+L LSFVV+D A+A D ++ F+L+V N C ++ +TLEW G D++L+V EPGG + Y ++ GD G+L+ N D GF G E Y++ S +LGEY VK YS T W LTA V VVW E G F SS
Sbjct: 138 GLCASNSFSSTGAPPCTTCPDGEVSGTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPG------SLTTTPAGTIQLTEEDGGSVSLSGTFVRDDG-AALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEAL--DTAGADTAFALDVSNSACVPSLTITLEWTGEISDVDLYVVEPGGEVV--YFSNRGGDVGFLD----------NDDTYGF--GPENYIIDSALDPAASQVLGEYETYVK-LYSGDAATETWRLTARVSGEVVWIEEGDFISS 419
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI) HSP 1 Score: 191 bits (486), Expect = 4.300e-48 Identity = 128/299 (42.81%), Postives = 167/299 (55.85%), Query Frame = 1
Query: 1267 ISATGLPPCTACPEGLWAQSGTTFCTDAALRGLGLPEALANAMTEDAVGGFAGPGDVDIDGEIILGWNQMFVLDEEDAGTLHVSGRFFRDDPDATIPASIALFLYLENEDTPDDFVRGRAEIDASTGTFTATFTDIPPKYSKLYLSFVVMDLADAAGPDERVQNSVFSLNVINEGCSKAMRVTLEWDGN-DDINLWVTEPGGTRLSSYTESKIGDFGYLNIRNGGGWTAGNPDL-GFEGGREEYVVFSG--QTGDAMLGEYTFSVKPSYSPSGVT--WTLTALVGDAVVWSETGSFESS 2145
S+TG PPCT CP+G + +G T C L GL LPE +A AM DA+GGFAGPG + L EED G++ +SG F RDD A +P+S ++F+Y EN PDDFVRG+ +D STG F+ TDIP S+L LSFVV+D A+A D ++ F+L+V N C ++ +TLEW G D++L+V EPGG + Y ++ GD G+L+ N D GF G E Y++ S +LGEY VK YS T W LTA V VVW E G F SS
Sbjct: 271 FSSTGAPPCTTCPDGEVSGTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPG------SLTTTPAGTIQLTEEDGGSVSLSGTFVRDDG-AALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEAL--DTAGADTAFALDVSNSACVPSLTITLEWTGETSDVDLYVVEPGGEVV--YFSNRGGDVGFLD----------NDDTYGF--GPENYIIDSALDPAASQVLGEYETYVK-LYSGDAATETWRLTARVSGEVVWIEEGDFISS 545
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE) HSP 1 Score: 158 bits (400), Expect = 1.140e-35 Identity = 108/310 (34.84%), Postives = 157/310 (50.65%), Query Frame = 1
Query: 1246 GKCPGESISATGLPPCTACPEGLWAQSGTTFCTDAALRGLGLP-EALANAMTEDAVGGFAGPGDVDIDGEIILG----------WNQMFVLDEEDAGTLHVSGRFFRDDPDATIPASIALFLYLENEDTPDDFVRGRAEIDASTGTFTATFTDIPPKYSKLYLSFVVMDLADAAGPDERV--QNSVFSLNVINEGCSKAMRVTLEWDGNDDINLWVTEPGGTRLSSYTESKIGDFGYLNIRNGGGWTAGNPDLGFEGGREEYVVFSGQTGDA--MLGEYT----FSVKPSYSPSGVTWTLTALVGDAVVW 2118
G C + S+TG PPCT CP G + G C + + LP EA+ AM DA GGFAGPG + IDG ++ G W ++ + D G+++VSG+F R D A +P S A+F Y+EN D PDD RG ++I ++G F+ D+PP S+L+LSFV+ D A+A V S+FSL + N C ++ +T EW G + +TEP T + S + G G W +P + Y+++SG D +LGEY + PS +P TW +TA V +V+
Sbjct: 760 GLCTTNTFSSTGTPPCTDCPAGEVSGRGAKVCVPQGVPAVALPSEAIVAAMLADATGGFAGPGSL-IDGGVMGGFGVTEVDIQPWGEIELTDAN-LGSVYVSGKFVRHDS-APLPFSSAVFFYIENADQPDDIARGSSKIRGTSGDFSMVVMDVPPGNSRLFLSFVIKDPAEALNVAAEVVPATSIFSLQISNMACVPSLTITHEWIGGNFAPYEITEPDLTTIHSGHGNYSGGVGVFQDN----WAGSSPAA------KRYILYSGLDVDTSQVLGEYKGRKFLPILPSETPP--TWRITARVSGEIVY 1054
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: D8LKE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE7_ECTSI) HSP 1 Score: 121 bits (304), Expect = 8.820e-27 Identity = 86/254 (33.86%), Postives = 129/254 (50.79%), Query Frame = 1
Query: 1405 AVGGFAGPGDVDIDGEIILG----------WNQMFVLDEEDAGTLHVSGRFFRDDPDATIPASIALFLYLENEDTPDDFVRGRAEIDASTGTFTATFTDIPPKYSKLYLSFVVMDLADAAGPDERV--QNSVFSLNVINEGCSKAMRVTLEWDGNDDINLWVTEPGGTRLSSYTESKIGDFGYLNIRNGGGWTAGNPDLGFEGGREEYVVFSGQTGDA--MLGEYTFSVKPSY--SPSGVTWTLTALVGDAVVW 2118
A GGFAGPG + IDG ++ G W ++ + D G+++VSG+F R D A +P S A+F Y+EN D PDDF RG +I ++G + TD+PP S+L+LSFV+ D A+A V S+FSL++ N GC ++ +T EW G + +TEP ++S G G W +P + Y+++SG D +LGEY + + S + TW TA V +V+
Sbjct: 10 ATGGFAGPGSL-IDGGVMGGFGVTEVDIQPWGEIELTDAN-LGSVYVSGKFVRHDS-AALPFSSAVFFYIENADQPDDFARGSFKIRGASGDLSMLVTDVPPGNSRLFLSFVIEDPAEALNVAAEVVPATSIFSLDISNMGCVPSLTITHEWIGGNFAPYEITEPDLNTINSDHGDVSGGVGVFQDN----WAGSSPAA------KRYILYSGLDVDTSQVLGEYKGRMFLPFVTSETPPTWRSTARVSGEIVY 250
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: D7G122_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G122_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 5.130e-17 Identity = 50/142 (35.21%), Postives = 77/142 (54.23%), Query Frame = 1
Query: 37 ANAWDTRADGYG-CAPRGCVAENVLDDSVEDASRWSCRANFMQXXXXXXXXXXXKLTFVFDEPRDIMEIRMALWRGDDRVRSVNVWVDGALVSTITSSGKTLKYEAYQLIAPQATTIMLQ---YDDSLTDWLSVTGVKFMAE 450
ANA+D R YG C P GC A D S +D SRWSC K+T+ F+EP+DI+ I++ ++GD+RVR++ + TITSSG + KYE + + + + ++ DD +W+S+T V+FM +
Sbjct: 17 ANAYDDRTSEYGGCDPDGCKASLTRDQSWQDESRWSCSEKLEDAQC--------KITYKFEEPQDIVRIKIKFYKGDERVRTLKLKGSDGFEKTITSSGTSSKYETWDINTDETKWLSMEALNLDDD--EWISITEVRFMVD 148
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 3.040e-16 Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 1
Query: 475 SPAPTDPDYVGCFSDTVGDRLLFTVEIDQALTPEACAATCAEDNKYFYGLQQGNECWCAGCDLTERDTNSNYDRHGVGRCSTPCAGDSTQMCGGDMEISLYQYATCLTTPSPTPPIPASDCPSASTPA 858
+PAP D +YVGC++D+ GDR+LF + +T C CA+ + +YG Q +ECWC D ++Y+RHG G C C+GD T CGG SL+++ TP+ P +D P ST A
Sbjct: 894 APAPEDEEYVGCYADSKGDRVLFDMISSDNMTAGVCREHCADKDAPYYGTQFSSECWCG-----TSDDEADYERHGEGVCHMACSGDGTVACGGYDAYSLFKHDNGGKTPTMAP---VTDSPDTSTMA 1013
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 1.230e-15 Identity = 66/218 (30.28%), Postives = 104/218 (47.71%), Query Frame = 1
Query: 16 VHGITASANAWDTRAD-GYGCAPRGCVAENVLDDSVEDASRWSCRANFMQXXXXXXXXXXXKLTFVFDEPRDIMEIRMALWRGDDRVRSVNVWVDGALVSTITSSGKTLKYEAYQLIAPQATTIMLQYDDSLTDWLSVTGVKFMAESALEESPSSPA-----PTDPDYVGCFSDTVGDRLLFTVEIDQALTPEACAATCAEDNKYFYGLQQGNECWCA 651
V +T A+ +DTR+ YGC P GCVA N D + D SRWSCR + +TF ++ + +IR+AL++GD R R+++++VDG ++T TSSG T +E+ L+ Q + L D + +WLS+ V+ + + + + + V +D RL TV D PE C A D + +G+ CA
Sbjct: 30 VMSVTPEASVFDTRSTLPYGCPPDGCVAANTRDGDMSDESRWSCRPSL------DASGSGCSITFTLEKVEYLGDIRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESV-LLMDQGQVVELVGDLNDDEWLSILEVEIDVDDGIVDDDTVVVLDVVEAAEMGTVTATADLYDTRLGDTVGCD----PEGCTAALTRDGD----MSEGSRWSCA 232
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 1.730e-15 Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 475 SPAPTDPDYVGCFSDTVGDRLLFTVEIDQALTPEACAATCAEDNKYFYGLQQGNECWCAGCDLTERDTNSNYDRHGVGRCSTPCAGDSTQMCGGDMEISLYQYATCLTTPSPTPPIPASDCPSASTPAS 861
+PAP D +YVGC++D GDR+L + +T C CA+ + +YG Q +ECWC D +++Y+RHG G C C+GD T CGG SL++Y P+ P + D P+ + A+
Sbjct: 1240 APAPEDEEYVGCYTDNKGDRVLSDMISSDDMTAAVCREHCADKDAPYYGTQFSSECWCG-----TSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKYDNGGEAPTTAPVTDSPDTPTMAPTAT 1363
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 2.320e-14 Identity = 59/160 (36.88%), Postives = 83/160 (51.88%), Query Frame = 1
Query: 25 ITASANAWDTR-ADGYGCAPRGCVAENVLDDSVEDASRWSCRANFMQXXXXXXXXXXXKLTFVFDEPRDIMEIRMALWRGDDRVRSVNVWVDGALVSTITSSGKTLKYEAYQL--IAPQATTIMLQYDDSLTDWLSVTGVKFMAESALEESPSSPAPTDP 495
+TA++ +D R D GC P GC AE D V D SRWSC + +++ D+ E+R+AL++G RVR+V+V VDG+L +T TSSG T +E L + Q T+ DDS +W+S+T M S SP SP+ T P
Sbjct: 194 VTATSALFDPRLGDSNGCDPAGCTAELTRDGDVSDGSRWSCAPSL---------GGTCSISYDLGAVYDLSELRLALYKGTTRVRTVDVTVDGSLATTWTSSGTTDGFENVDLSGYSGQDVTVTGVLDDS--EWVSITETDIMVLSDSVVSPPSPSTTTP 342
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Match: D7FQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI3_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 1.040e-12 Identity = 46/110 (41.82%), Postives = 58/110 (52.73%), Query Frame = 1
Query: 457 LEESPSSPAPTDPDYVGCFSDTVGDRLLFTVEIDQALTPEACAATCAEDNKY--FYGLQQGNECWCAGCDLTERDTNSNYDRHGVGRCSTPCAGDSTQMCGGDMEISLYQ 780
LE AP +YVGCF+D DR+L + ++TPE CAA CA+D+ +Y Q G ECWCA RD + Y RHG G C C GDS CGG L++
Sbjct: 168 LESEGLPVAPMGDNYVGCFADDKEDRVLGSKMSSGSMTPEVCAAYCADDSPSHTYYATQWGRECWCA------RDVD--YSRHGEGSCDYTCTGDSGTTCGGYDAFDLFK 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5674.13211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5674.13211.1 >prot_H-paniculata_contig5674.13211.1 ID=prot_H-paniculata_contig5674.13211.1|Name=mRNA_H-paniculata_contig5674.13211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=764bp MQEYVEDAVFTPCKLTFVFDEPRDIMEIRMALWRGDDRVRSVNVWVDGALback to top mRNA from alignment at H-paniculata_contig5674:2799..10010+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5674.13211.1 ID=mRNA_H-paniculata_contig5674.13211.1|Name=mRNA_H-paniculata_contig5674.13211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7212bp|location=Sequence derived from alignment at H-paniculata_contig5674:2799..10010+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5674:2799..10010+ >mRNA_H-paniculata_contig5674.13211.1 ID=mRNA_H-paniculata_contig5674.13211.1|Name=mRNA_H-paniculata_contig5674.13211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4584bp|location=Sequence derived from alignment at H-paniculata_contig5674:2799..10010+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |