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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 552 |
| Cds size | 534 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5661.13196.1 >prot_H-paniculata_contig5661.13196.1 ID=prot_H-paniculata_contig5661.13196.1|Name=mRNA_H-paniculata_contig5661.13196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
MRIDGSAGGRRERFDSWTSRFPLSNGISFSTGTMKPKSASARPMLLYTPE
KDGTIMERAAAAFEEDLRSVSQYCEEEILSSLSQSGDEGCVQVAFEWSEV
VAAARGISSRNNMGKKPTDAPVRKMRSLHPYYSSGSEGDRDACERENTVD
QDDDNTSNVSAAPAERTRGGARGMLDPW back to topmRNA from alignment at H-paniculata_contig5661:3022..11136- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5661.13196.1 ID=mRNA_H-paniculata_contig5661.13196.1|Name=mRNA_H-paniculata_contig5661.13196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8115bp|location=Sequence derived from alignment at H-paniculata_contig5661:3022..11136- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGAAGTATATATTGGCAATGAGGATTGATGGTAGCGCAGGAGGCCGGAG
AGAAAGGTTTGATTCGTGGACATCTCGTTTTCCGCTGTCGAATGGGATAT
CTTTCTCAACCGGAACCATGAAGCCGAAAAGCGCATCTGCAAGGCCAATG
CTTCTTTACACCCCTGAGAAAGACGGTACAATCATGGAGAGAGCAGCTGC
GGCGTTCGAGGAGGACCTGCGATCGGTAAGCCAGTACTGCGAGGAAGAAA
TACTGTCATCGTTGAGTCAATCCGGTGATGAGGGCTGTGTGCAAGTGGCC
TTCGAGTGGTCGGAAGTGGTCGCGGCAGCGAGAGGAATATCGAGCCGTAA
TAATATGGTGAGTATCATGTGTCCAATGCGTCCAATCGTACAGTGTAGTA
CAGTCAGTGCCCAACAAGCGGAGCATTTGTTTTCTTACTTTTTCGGTTTC
CGGACCCTCATGTATGTATGGTGTTGAGAATATGGCGCATGTGCGCGACC
CTTTTCGTGTTATTTTGCTGACTATCCTGACATGGTGTTCATCATTGTTT
GCTGCGTGTGCAGCCTGGGAAAGACTGCCTAACAGAGCAAGGTACTGCTG
TGTTATTGTGTTCATATCGCTCTCCATTTTATTCAGCAGTAAAAAATGAG
CGAATTGTATATATCCGGATTCGGCGCACATGATACATTCATGTGCTCCG
CTAGCACGGCACAGTACTGTTCGCATGCGGCTGCATTCAGTAATGGGATC
TAAACATAATTTTCTCATTGGTTCGTGGCGCCCGGGTGGTGGGGGGCGTC
ATCGTGGTGACCCTGGAAATGTGTCCTCTGTGACCCCAACTCCAATTTCG
AAAAATAAGAGGAGGCCAGAGCCAAATTGATATGGCCACCCTAGCCTCAT
TTTGCCTTATTCATGCTCGACCGTTACATAGTTGCATTTGTTTCGTGAAC
AAACCCTGGTGGCCTCAAAGAACCTTAATGTATGGTATAGCGATTTTGCT
TGTTGTGCCGTCTGATGAACCACAATTCTGGCGATCGAGGATGGAGCATG
TACAGCACACCCCATTGCGTTCACAACCAACTCAACAAAACCACGAAATA
TGAATAGGAGTCTTCAGACGTAATGTATCTGGTGGATCGCCCGATGTAAT
TTTGTAATTTTCGAAAGATCCTCCGGGAACGTAATAGGCACTTTGTATGA
TATCGTCCTGGATACCTGCGGTTATTATTTTAGGCGACGACAAAGGCATT
TTACGCTCCCACGGGTGTTCCTGGGGGTGTCTTTCAGATGTAAATGTGGT
GAAACAAGCTGTCCCCTAGTCAGCGCACTAGCCGTGTGAGCTGTACTACG
CGCACGAAACGTTGTTACATCAAGTCAATAACGAATATCTCCCATTTTTC
CTCCCTGCAGTGGGTGGGTCGAGTTCAAAAGATACCTGAAGAGTAAGATA
TAGAGTACGTCTACTACCCGGTAGTACTAGTGCTTTAGGGAGAGAATCTT
GGTTATTTTATCTTTTAGCACTTGCATACATTTTTTTTTTTCCAAACTTG
ATCTTCTTGTCGATGCTATACTTATTATGTGTAAAAGTGAATCGTACTTC
ACTGTGGTGCTATAAAGCTGCTGAATGTGCTGACCTTACTGTCACAATTG
ATGATCCGCGCATGCAATATATGTCACAGAACGCTGGTACAGCAAGCTGC
CACAACCTCCACACTAGTTGCATCCCAACCGAAGAGAAACATCAGAACCC
CTTGGCAAGAGAGAACGAACAGCGAAAATCCAGGCCTGCTTGCCCATTTG
ACAAAACTCACTGCTGAGAATCAACCATCTTAACATCTCTACTCTACTAA
TGTAATGCCACAAGTATTCAAGAGTAAATTACTCCACCGCAGTTTGTACC
CCTTTCCGGAAATACCATCGATGGCTGAAAGAGCCGCGCTATCGACAGGT
GTCGACAGCATCCGTCGTAAACCCCACTGCAATTTCGCTGGCGTGGAGAG
GGGGACACAAGCTTTTCTGGAATTTAGTTTTGTCGGGCAAGCGCCCGGGT
TGTTGTTTCGGTTAAATTACCTCTTGGAGTATTTGATGCGACGCGGAACT
TGGCTCCATCGAATGTACGAAGATATTGTGATGTCTTCCTGTCCTGTAAA
TGGAAGATATATGAAAAGTAACGAAACATAGTCCGTTTTTTCTCAGTGAA
GTAGAACGATCGCAGGGCTCAAGTAGTGCCCATGGATGGCAAGGGGGTGG
ACTCCTGGGTACGACACGACGTCACAGGTTTCTGGTTCATACAACGAGTA
ACTGTATGTGTCTATCGTGCGCATGTGTTTTTAGTTTGCTCCCCACGAAG
GTCAAACGAACTCATCCGATAGATACGACCTGCACTTGCTGACCGGTAAC
ACGTCAATATAGCCTCCCACTCATCATAGTTTTGTACACAGGTACAGACA
ATCATACAGGAGTACAACCGGTGTAAGATATCCGGGTATATGTCAGCATC
TTTACAAATAGAAGAAACACAGTACTTGTAGCCGGCAGTAGTTAGTTACT
GTTCACAGCGCACCCAGATATAGAACGGCACTTCTCCCCTTCGAACAATT
TCATCTCACCAACGGTTACAGAGTTGGGTGTTGGGGTCTTCGCTTATTTT
TTCAGGGTTGGTTTGTTGGGGAGATAGATCTCGATCCAAAGTGTGCGGGT
TGGCGGGTGAACAAAACTGAACGACTCGTCTTGGAAGTGACGAGAGCAAG
CACGTCAGCAAGGGCTGTTCTTGAACGAGCGAGGCTGATTTTCCGGTGTC
CGATTGTTTACCAGTTTATACGCATCAGCCATGTTGTAAGTGAGGCCATT
TTTGTCGGACCTTTCCGTTTTTCTGCTTTCTGAAAATTGGAAATCGCGAT
TAGCGAGCTGAAAAAAATGACGGCTGTGACGAGTGTGCATGAGACGTATG
TAAGCATACGGCGTTCTTGCCTCAATTTTGAGATCGCATGGCGATTTCAA
TTTGGGGAACCGGGAAAATCGGCCAAAAGATGGCTTCTTTATCTTAACAT
TGGAAACCACGTTAGCGACGACGACTTGACGACTGTGACCAATTGCACCA
GACGCCTGAGGGCAACAAACATGTGGTACACTTTTTCCTTAATCCTGATT
TCTAATCTATCCGTTTCCGAAAAATCAGAAAAAATAGATAACAAAAGGCC
TCGTTTTAGAATGACCCTAAACAGCCAATCATCGCATTTGAGCATCGATC
TTTTTATTGAGGATGAAACGGCTTTTGGTGATTTTACCAACAACGAATGC
TAAATCATTCTAAACCGTCTAAGACTGCGTCAAAGAGCATGAAGTCAGTA
TTCACAGAGCGATGTTCGTTTTCAAGCGAGCCTTTGGTTGCCGAGATATG
GGCGAAGTAGGAAGAACATACCGGTATATGGCTGGTAACGGTTTTTCTCG
ATTATTCCTGATTTCGGGTCATCTCGAGATTGGCTTGTCCAATCTAACCG
AAAGTAGGTGGGTTCAACAGCTATTGAGGAGAAGCATAAATTTTGACCCC
TCGGTATTTTGTGTTTGGCATGTGAGCAAAAATTATATTTCAAATGCATT
ATCCTGAATGAGAAGGTCGATCCTCAATTTTGAGGATCGGCTGTTCCCAC
ATGAACTGTGCCGCACTTGACTATGCGAAGATGCTGCAGGTACTGGCCTA
TTCGTTTGTATCCTAAGATCCTGAGCTGAAGAGCACCATATCATCAAAGC
AGCGTGTTGGTTGTTGGTGTCCTTTTCGAGGGAGAAAAGATGGGTCAAAA
TTATAAGTGCTAACTCTATTTATTTATATGTGCGTGTGGTACCCGGGTAC
CGTCCAACACCTGAACCGCTTAATGATAACCTCATTCGCTAATTGTGTTG
AATACAATGACGATTTCTCTGTCCCGCAAGAGGTAGAGCGAAATATGTCC
TCTTTTTCCAGGCGTTTATTGTGGCAACAGTTTGGTGAATGTGATGCATT
GTATAAGTTGCATATGACACACGAGGTCGTTTTCTGTCCGATCCTTTCAT
TTTTGCAGTTTTCTGAAAAGTGAAGCGGTGATAGCGGGCTGAACACGTTG
ACGACTGTGACTGTAGTACACCAGGCGTGTGAGGGCAATATGATGTATAG
TGTTTCCGCCTCGTTCTCTCGATTTTGAAGCTCGCTATCGCGATTTCCAA
TTTCGGAAACCGAAAAACAGAAATCTAGCAAAAAATGGTCTGAGTTAGAA
CCGCCTTAAGTATGTTGAAACGTTTCGAATGTTACCCTGCAAATTTTACA
CACCAGGTAGGTAGTGCTGCGTACAGTGGCAAGTCAACTCTTCTTCCCAT
ATACAGTATAATCTAAAAAATCACACTTCTGCATGCAAAACCAACAAAAA
AGAAGAAACTGTGATGTCCGGTCATGATACTACTGTGAGGAGCAGGGCCT
TTGCAATGTTTGTCTCCTCTGTACACACTCCGTGCCATCAAACGCCGGTT
GATACCGATAGACCTTACTGCGGTGGCAAGTCACGTGGTATGTATCTAGC
GGCTTATTTTCACCGGTGGCATGTGTTGGCTGTATTACTGCCTATACTAT
ACTGCAATGGTCAAAGCTTACTTACTGCGTGTAGATCATGCTGGCCACTT
GACCCTATCGCGTGACTACAATGTTGAACTGTCAAGGGAAATACGGTGCG
GGATTACGGTACTCGCACTCCAGCCCTATTCTGTTGTATTCCACGCCTCG
TTACCCCACTCCACTAAAATCTACCTCGCTCTTCACTCTGCATTCGCAGT
TTGTCGCTGCCCCATTGCCTTGTTGTTCGCGATTGCACTGGTTATTGTTT
TGGAGTAAAAAAGGCATAGAAAGTTCGAAAGGAGCATCAAGTGTCTTGTG
CAGTTGACTGAATGCCATCAACAGATTTCAGAAAGGTCGTTCCGATGACA
CAACTTCCAGCGCCACGAGCACCTGTAGTATGAAGTGGTTCAAGACGTCG
AATTTGAAAATGTTATCACCGAGGTAAATCATTGTGGTCGGCACAAAAGG
TGGTCGGAACCCCGAGAAAGGTTCAATAAAGACAGACCACCGGAACCGTT
GTTCGTACTGTCCATTGTAGCGTGCGGTGCTATCATCTCCGCCGAACATC
AACCCGAAGATGTCCGTTCACCGTTTGTATGAAGACTTTTTTTCAGCGTG
TGCTGCCGGTGAAGTAGGAAGGTAATGGTAGAACTAACCCCTCCTGGTGG
TGGAATTGGTTATACTTTTCTGAATGTAGCGGGAATGAGGCGGGTAGTAA
TGCTAAATGTTTTCATCTCTTGCTGAAAGTTCGGACTTTGATATTATACT
GTATACTCCCGCTGTAAGTCCTACTAAATATAGCGTCGTACTGACTGTTA
CATCAGATTCATACCCGTATGATGTTTTGTGGAGTACAGACATGTGAATC
CTCACAGAAGTCAGGCAGCTTTCCTAGCCGCGCTAACCCAATCCAATCTC
CACCTAAGTAGTCCTGACCCTGAATTCGAATCAACAGATCCCATTATAGT
GTGCGTTGGGAGGATGTACAGTTGTCCGAAACTTCGTTGGATGCTGAGTC
GCTTTCAAAAATCTAGGACGGGGGTGATGATGTAGTATACAGTTATGATC
CGCGGGGGGTAAAACAAGACATATGGCTATTTTTACTTCAGAACGGGTCG
TTGTGTGTGAAAGTACAGAGTACATTCCAGCTCTTCCCCGACGACTCTGC
CGCTGATTCGAGGCCATAAGTAATATGTGTACCATACTAAGCATGAGCAA
GTAACGTCGACCCCAGCTCAAAGACGCATGTCGTGAGCAGAAAATTGAAG
AACAAGTCGTTCAACGGTCGCGGGGGGGGTGGATTGGCCATTCTGTTGGC
CCTATTATTGGCGGAACATTGACGATTGTTGCAACCCATATATATGAACT
ATGTATATATATTTTCTTGATTCTCTTGCTCCCAGCCGCGTCCTTAAACA
CAGTGGGGGGGGAAGACAGGGGTGAAACCCATCCGTCGCTGCAGGGGAGC
AGATACCTCTTGATGAATCAACAACCTCCCGTTCGTTGAGCTATTCGTGC
GTTCGTAACGCTGGGTCATGTAACGTCCTTAAGGTACCCGGGATGGTAAA
CTCGCTATTCCTTCGTCTTTTAATTTGATGCTTCTTGTCAAGGAATCCCC
CCCTTCGACGAATTGAAATAATCTAGTACTGGAGTATGACTACGAATAGC
AACAGCTACGTCGGTGCAGAGCAGTTTGTGTGTGTCCTCGACTCATGGCC
TCGCTTCGGTCGGAGTGGGGGCGTGTGCAGTAAACTTTACTGCTCGCCGC
CGTTCGCATGAAGTATTTTTTTCAAGTACTTACCCTAGAAATGAAAAGAT
GCCCCGAAACAATGATGACGACGATAATGACAAAGAGAACGACGGCCACC
TTGCCATATTGAAGATGAGTGAAATACATGAATGGTTTACGAGTTTTTAG
TTGACCTTGCAAAATTCAGCGTTACAGGGATGCTGGAAATCATACCCCGG
TCTCAACTGTACTGTAGAGTGTTCTGTACTTGCTGTACATTGTAAAAAAA
CGTGCGAGGGGAGCAATTGCCCAAACATCAGACCTGTCCCGCAAATTATC
ACACGTCGCCTGTACCTTATCTCAACTCCGAGTTGCCCCGCACCTTTTCT
GTGCCTCTCGCGTAGTGGCATCGTGTACCGTACGAACAAAGCGCGACGCT
TTTTTTGTCTCGGCATAAGCGTCCTCTTCTCCGTTTACTCAGAGATGGGT
GCGAATCATTCAGCCATGTATTCAAGGCCGCTTCAAACGTCGAGTGTTTT
AATTTTTTTTTTAATGTTTCTGTTTTCCCTTTTTTCTTTTTTTTTTTTCA
TTTCGTGATAAAAAAAAAACAGTTCGCCTGGAGTGTTGCTTGTCTGGCGC
CATGTCGTAGGGCTGGGGTATCGTCATTTAAACACATGAAAAATAAAATG
TTGGTCGATTGGCGAAGCTAATATACTGTTTTCGTCAACGATACATCGGG
GACAATATATCGTCATTGCGGGTGGCTTGTAGCGAGCTCAATGCCCCCTC
CGGCTGATGAAGGGGCCTCGCCAGAAGCCAAAAATATACGCGTTTGGGCT
TAATCGTTTTTCAAAGTTGCGTAGTGCTCCTTTCGTTGGGTGATGACCAA
AGGATATGTACATTCAGCGGATCCTGTCAAGCTGCACTCTTTGCTCTAAC
ACATAGTGGCATCTATGTGTACCTTACGAGAACACATGTAGCGATCGAAT
AGCTGTTTATTGCGTCTGCTGACCTTCCTTGACCCTTGAGGAGTCTATGA
CCCGCTGCTCAGCTGTGCAGGGACTTGTTTACTTCGTGGCAATTACAAAA
CAGCCGCGCGATGTTTCGTTGTGCCTCTTCTCGCTCTATACCAGATTCAA
GGGGGGGGGGGGGAAGGCCCCAAACCGTAGAAAAATGACCCTCTTTTGCA
CCCGAGGTGTACTGTACTTGCCAGCTATCTAAAGCTGATGAAGCATTCCG
TCGACGTATTCGCCATGATTCACGACCGATGGTCGGCAAATCTATATTTT
CGTCGTTACGAAATATTGTTCTTGAAGGGCTAAGCGATGAGGCTTGTCGG
TGCCTTACATATTTGCAGTTGTTATCAAGAATAGGGAACCATCGATAGGT
CTCGCTCCTTGGCATATGATGAGTGAGACGTGCCCGCTAATCTCATTTCC
AAGCATTGTTACCGTTGAATAATATTCCCCAACCTTTCAAATATCTCAGC
CCCCCTACACCCCGCTCCCAAATCCATGTTAGTCTGCCATCTAATTATTG
CTTCGTTTTGAATTCCTGTTTTTTTTTTTTAATCGTCACGTACTCCCCCG
CTTATTTTCTTGGTACGCAGGGAAAGAAGCCTACAGACGCGCCTGTAAGA
AAAATGCGAAGCTTGCACCCGTACTACAGCAGCGGTAGCGAGGGTGATCG
GGACGCTTGCGAAAGGGAAAACACTGTCGACCAGGACGATGATAACACTA
GTAACGTATCCGCAGCTCCGGCGGAGCGAACCAGAGGGGGCGCGAGGGGA
ATGTTGGATCCTTGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5661:3022..11136- >mRNA_H-paniculata_contig5661.13196.1 ID=mRNA_H-paniculata_contig5661.13196.1|Name=mRNA_H-paniculata_contig5661.13196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig5661:3022..11136- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGATTGATGGTAGCGCAGGAGGCCGGAGAGAAAGGTTTGATTCGTG
GACATCTCGTTTTCCGCTGTCGAATGGGATATCTTTCTCAACCGGAACCA
TGAAGCCGAAAAGCGCATCTGCAAGGCCAATGCTTCTTTACACCCCTGAG
AAAGACGGTACAATCATGGAGAGAGCAGCTGCGGCGTTCGAGGAGGACCT
GCGATCGGTAAGCCAGTACTGCGAGGAAGAAATACTGTCATCGTTGAGTC
AATCCGGTGATGAGGGCTGTGTGCAAGTGGCCTTCGAGTGGTCGGAAGTG
GTCGCGGCAGCGAGAGGAATATCGAGCCGTAATAATATGATGAGGATTGA
TGGTAGCGCAGGAGGCCGGAGAGAAAGGTTTGATTCGTGGACATCTCGTT
TTCCGCTGTCGAATGGGATATCTTTCTCAACCGGAACCATGAAGCCGAAA
AGCGCATCTGCAAGGCCAATGCTTCTTTACACCCCTGAGAAAGACGGTAC
AATCATGGAGAGAGCAGCTGCGGCGTTCGAGGAGGACCTGCGATCGGTAA
GCCAGTACTGCGAGGAAGAAATACTGTCATCGTTGAGTCAATCCGGTGAT
GAGGGCTGTGTGCAAGTGGCCTTCGAGTGGTCGGAAGTGGTCGCGGCAGC
GAGAGGAATATCGAGCCGTAATAATATGGGAAAGAAGCCTACAGACGCGC
CTGTAAGAAAAATGCGAAGCTTGCACCCGTACTACAGCAGCGGTAGCGAG
GGTGATCGGGACGCTTGCGAAAGGGAAAACACTGTCGACCAGGACGATGA
TAACACTAGTAACGTATCCGCAGCTCCGGCGGAGCGAACCAGAGGGGGCG
CGAGGGGAATGTTGGATCCTTGGGGAAAGAAGCCTACAGACGCGCCTGTA
AGAAAAATGCGAAGCTTGCACCCGTACTACAGCAGCGGTAGCGAGGGTGA
TCGGGACGCTTGCGAAAGGGAAAACACTGTCGACCAGGACGATGATAACA
CTAGTAACGTATCCGCAGCTCCGGCGGAGCGAACCAGAGGGGGCGCGAGG
GGAATGTTGGATCCTTGG back to top
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