mRNA_H-paniculata_contig5632.13159.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5632.13159.1
Unique NamemRNA_H-paniculata_contig5632.13159.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: A0A6H5JRW8_9PHAE (3'(2'),5'-bisphosphate nucleotidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRW8_9PHAE)

HSP 1 Score: 727 bits (1877), Expect = 5.970e-252
Identity = 405/710 (57.04%), Postives = 495/710 (69.72%), Query Frame = 1
Query:  313 HDVNAERRLHSLATAIETEHGGRVAMEGRVAVEEACVVNLDTPTGLSNEDDCADTISTN---------VPMFVFEKSGLAIDEYHAYGSTAYEDEVQKRVKAALSLSRSKDASTLKELWSPDVTGGNYRDDMSVATYAVQVASIVARELQAELCKQGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPVSLAAVLEVVRKALDPE-LTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAH--DARGLLYSAALGEGTFVRALSGAGDDTRRVMVDHARRPCETRVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLPRWGYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVGIVATSGKIHGEVVRAVESRQVEDWARIIAEAKRRGWEN----GDVAPPLPGVDWSFGLEEGVDRLDDERW-SSAVVQQQPLVMRTSGQFYGALERGWDKVVAVLFHGSWTQESQHAVGLLQHLAW-----------------------RRHQHQGPGSSSRVAPQAT-NYRRADIAGK----GTDRLMAD--------VVFAEADVMTLIDVADRQAIAALPSVHLHLGGREVLRFPVKRDESVESVGAKID 2283
            H V  + R+  L   + ++  GRVA+  R+    +         G   ED+ +D +  N         +P F FE+ GLA DEYH +G   +E+E+ KRV+AALSLSR +D STLKELWSPD  GG+YRD+M+VATY VQ+AS VARELQ ELCK  AISK DSSPVTV DF+VQA+VL +L+RYFPG+GFIAEE+S+VLRQDP SL+ VL VVR  L  + L EA+LCAAIDLG RGHG   R R  +GGRTWVLDPIDGTKGFLRGEQFCVALGLL+ GKAVAG+LGCPNL        P +      +  A   +ARGLLY+AALGEGTFVR +S   DD+RRV VDHAR+PC+TRVLESVEAGHTSH VAA VC+DLGI L PIR+D QCKYGLLSEGQGGIYLRLPRWGYVENIWDH AG+VVI+EAGGKVTD+RG PLDFSLG KLPREVVG+VA+ G++H +V+RAV++RQ+EDWAR++A A+ +  E+    G  AP LPGV+W    ++       E W ++A+ Q++PLVMRTS QFYG L R W K+VAVLFHG  T  SQHAVG+L+ LA                        RRH+    G+     P+A  +  R  +A      GT +  A+        V+ AEA+VM+LI+VADRQAI  LPS+HLHLGGRE+LR PV   E+VES+G +ID
Sbjct:   68 HFVPGDGRIEILTNDLLSKAQGRVAI--RLRPHASSSEEEGVRGGRGAEDEGSDGVEVNDGMVFSKDCLPAFRFERGGLAFDEYHTHGDVPFEEELAKRVEAALSLSRPEDTSTLKELWSPDAEGGDYRDEMAVATYVVQIASHVARELQGELCKAEAISKTDSSPVTVADFTVQALVLGVLSRYFPGHGFIAEESSSVLRQDPESLSHVLSVVRTVLGRQGLAEADLCAAIDLGTRGHGKNKRGRRGKGGRTWVLDPIDGTKGFLRGEQFCVALGLLDGGKAVAGVLGCPNL--------PCHKHPSEFSGWAQGGEARGLLYTAALGEGTFVRGISAGADDSRRVFVDHARKPCDTRVLESVEAGHTSHAVAAQVCNDLGITLPPIRVDGQCKYGLLSEGQGGIYLRLPRWGYVENIWDHCAGSVVIREAGGKVTDTRGEPLDFSLGTKLPREVVGVVASCGRVHSDVLRAVDNRQLEDWARVVARAETKSRESEPPPGSAAPSLPGVEWMPLNDDIGGSSVGEAWQATALSQRRPLVMRTSDQFYGTLARNWHKLVAVLFHGG-TSYSQHAVGILESLALLQQEPPKSQXXXXXXXXXXXXEQRRHRSGLSGAKPPSPPRAQPDLERESVAAATTTTGTIQPEAEEPRAERVPVLLAEANVMSLIEVADRQAIGRLPSLHLHLGGREILRIPVNFGETVESLGKRID 766          
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: A0A4D9D727_9STRA (3'(2'),5'-bisphosphate nucleotidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D727_9STRA)

HSP 1 Score: 285 bits (728), Expect = 2.580e-85
Identity = 167/366 (45.63%), Postives = 218/366 (59.56%), Query Frame = 1
Query:  652 VTGGNYRDDMSVATYAVQVASIVARELQAELC--KQGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPVSLAAVLEVVR-KALDPELTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAHDARGLLYSAALGEGTFVRALSGAGDDTRR-------VMVDHARRPCETRVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLPRWGYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGA-----KLPREVVGIVATSGKIHGEVVRAVES 1704
            +T  N +D+++VA    + A I A+ LQ  L   K+ AI K DSSPVT+ D++VQA+V+  L   FPG   +AEETS VLRQDPV+LAAV++V R ++ +  +TE  LC  +D     HG L       G RTW+LDPIDGTKGF+RGE FCVALG+   GK V G+L CPN       +P   S     +N A    G ++ A  G+G F+  L   G            + V  A    E R  ESVE  H+SH V A     LG+   P+++DSQCKYGLL+ G+G + LRLPR GY+ENIWDHA   VVI EAGG+VTD+ G  LDF+ G      K+ REV GIV T+G++H  VV ++ S
Sbjct:   40 MTTTNLQDELTVAISTARKAGIAAKRLQKTLIETKRAAIEKSDSSPVTIADYTVQALVIAALRVSFPGDQVVAEETSGVLRQDPVALAAVMDVFRLESGETYVTEESLCEILD-----HGRLP------GPRTWILDPIDGTKGFIRGEHFCVALGMALEGKPVLGVLACPN-------VPSSTS----RSNGASLGDGCVFFALKGQGAFMLPLEANGSSLAEEITHAVPIRVSPATAGEEARFFESVETAHSSHSVGAEAARALGVLTPPVQMDSQCKYGLLARGEGEVMLRLPRLGYIENIWDHAPAYVVITEAGGRVTDTEGKELDFAEGCRSGTGKMGREVTGIVTTNGRLHDLVVESLRS 383          
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: A0A7S3AAM8_9RHOD (3'(2'),5'-bisphosphate nucleotidase n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAM8_9RHOD)

HSP 1 Score: 266 bits (679), Expect = 4.760e-79
Identity = 162/350 (46.29%), Postives = 213/350 (60.86%), Query Frame = 1
Query:  664 NYRDDMSVATYAVQVASIVARELQAELCKQ-GAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPVSLAAVLEVVRKALD--PELTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAHDARGLLYSAALGEGTFVRALSGAGDDTRRVMVDHARRPCET-RVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLPRWGYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVGIVATSGKIHGEVVRAVE 1701
            +Y D +  A   V+VAS +++ +Q    ++ G +SKMD+SPVTV DF+VQA++L  L+     + FIAEETSA L+++   L  V + V  AL   P L+E ++C AIDLG    G+           TWVLDP+DGTKGF+R EQ+C+ALGLL+ GK V G+LGCPNL              DA      D  G ++ A  G G F  ++ G    T R +   AR    T R +ESVE+ H+S   +A V S LG+   P+R+DSQCKYG L+ G G IY+R PR GY ENIWDHAAG++VI+EAGG VTD  G PLDF LG K+  E  GIVAT+G  H  V+ AV+
Sbjct:    2 SYEDFLQRAISVVRVASSMSKTVQKRFRQETGTLSKMDTSPVTVADFAVQALILSELDD--GTFKFIAEETSAQLKENSELLKDVTDTVNSALPGRPALSENQICGAIDLGSYAGGDSLL--------TWVLDPVDGTKGFMRMEQYCIALGLLDRGKVVLGVLGCPNL------------PFDA------DETGCIFYAQSGSGAFCVSVDGT--HTPRQIKVSAREDVSTCRFMESVESAHSSFEQSAKVASILGVKEPPLRMDSQCKYGALARGDGQIYMRFPRAGYEENIWDHAAGSIVIEEAGGTVTDGIGHPLDFGLGRKMKNEG-GIVATNGVFHEAVICAVK 320          
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: R7QQQ1_CHOCR (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQQ1_CHOCR)

HSP 1 Score: 256 bits (655), Expect = 2.970e-75
Identity = 146/358 (40.78%), Postives = 206/358 (57.54%), Query Frame = 1
Query:  655 TGGNYRDDMSVATYAVQVASIVARELQAELCKQGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPVSLAAVLEVVRKALDPELTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAHDARGLLYSAALGEGTFVRALSGAGDDTR---------RVMVDHARRPCETRVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLPRWGYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVGIVATSGKIHGEVVRAVE 1701
            +   Y  + + A  +V +AS +AR LQ  L    A++K D+SPVTV DF+VQA+++  L+  FP   FIAEE++  LR+DP  L AV +        ++ E+ L   IDL     G+        G RTW+LDPIDGTKGF+   Q+C+ALGL++ G A  G+LGCPNL +     P   S +           G ++ A  GEGT++ A       T+         R +V     P  T   ESVE GH+SH ++A V   L +   P+R+DSQ KYG ++ G   I+LR PR GYVEN+WD A  A++++EAGG+VTD RG PL+F+LG KL  +  GIVAT+G +H  ++ AV+
Sbjct:    5 SASKYSAERAAAVTSVALASALARRLQHALSGSKAVAKADASPVTVADFAVQAVIVSHLHSRFPNDRFIAEESTPALRKDPALLRAVCDAA------DMDESHLLKIIDLCDHEGGD--------GARTWILDPIDGTKGFIAMRQYCIALGLIDGGVARVGVLGCPNLPLTGMEAPDTGSDI-----------GCIFHAEQGEGTWMLAEGDVDTSTKSTTATVGGKRCVVSKVAEPSWTEFCESVERGHSSHELSARVAEILKVTAPPVRMDSQAKYGCMARGDVSIFLRFPRDGYVENVWDSAPAAIIVEEAGGRVTDGRGRPLNFNLGRKLDNDD-GIVATNGYMHDAIIAAVQ 336          
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: A0A7C8CU36_9DELT (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C8CU36_9DELT)

HSP 1 Score: 254 bits (648), Expect = 2.080e-74
Identity = 157/348 (45.11%), Postives = 194/348 (55.75%), Query Frame = 1
Query:  664 NYRDDMSVATYAVQVASIVARELQAELCKQGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPVSLAAVLEVVRKALD--PELTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAHDARGLLYSAALGEGTFVRALSGAGDDTRRVMVDHARRPCETRVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLP-RWGYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVGIVATSGKIHGEVVRAV 1698
            +Y  +  +A  AV+ AS + R +QA L  + ++ K D SPVTV DF  QA+V +IL   FP    + EE +A LR DP + A   +VV    D  P L   E+   ID G    G+         GR W LDPIDGTKGFLR +Q+ VAL L+E G+ V G+LGCPN+ +G D+                   G L+ A  GEG F RALSG   D + V V    R       ESVEA H+S   +A V   LGI   P RIDSQCKYG +S G   IYLRLP R  Y E IWDHAAGA+V+ EAGGKVTD  G  LDFSLG  L R   G++ T+G +H  V+ AV
Sbjct:    2 SYAAERRIALEAVEKASFLCRTVQANLVAEASMDKRDKSPVTVADFGAQAVVTHILRGAFPDLPLVGEEDAAALR-DPENHALASQVVAHVRDTLPGLGADEVLDLIDYGTFEGGSS--------GRHWTLDPIDGTKGFLRMDQYAVALALIEDGEVVLGVLGCPNMPMGGDL-----------GGDPDGEPGCLFIAVRGEGAFQRALSGG--DEQPVRVTDISRTEAANFCESVEAAHSSQSDSAQVAQRLGITAEPFRIDSQCKYGAVSRGDASIYLRLPTRKDYEEKIWDHAAGAIVVSEAGGKVTDVMGRDLDFSLGRTL-RNNSGVIVTNGVLHDPVIAAV 326          
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: A0A2D5ZT17_9BACT (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2D5ZT17_9BACT)

HSP 1 Score: 251 bits (641), Expect = 1.970e-73
Identity = 158/350 (45.14%), Postives = 205/350 (58.57%), Query Frame = 1
Query:  667 YRDDMSVATYAVQVASIVARELQAELCKQGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPVSLAAVLEVVR--KALDPELTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAHDARGLLYSAALGEGTFVRALSGAGDDTRRVM-VDHARRPCETRVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLP-RWGYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVGIVATSGKIHGEVVRAVES 1704
            Y  +  +A  AV  AS + R +QA L ++    K D SPVTV DF  QA+V   L  +FP    + EE +A LR+   ++    +VVR   A+ PEL++ ++ AAID     HG  A   PE  GR W LDPIDGTKGFLRG+Q+ VAL L+E GK V G+LGCPNL                +A      RG +++A  GEG  +R +  A +   RV  +D    P      ESVE  H+S   AA V + LGI++ P RIDSQCKY  ++ G   IYLRLP R GY E IWDHAAGA+VI EAGG+VTD RG  LDFS+G  L R+ +G++ T+G++H  VV AV S
Sbjct:    3 YELEREIALKAVLKASRLCRSVQANLVEEATHVKKDRSPVTVADFGAQAVVSRDLMTHFPADRLVGEEDAADLRESS-NMKIREQVVRHVSAIHPELSDDQVLAAID-----HGTYAGG-PE--GRHWTLDPIDGTKGFLRGDQYAVALALIEEGKVVLGVLGCPNL--------------PHDATPREGERGCVFTAVKGEGATMRTMEDAVEFPIRVTDIDD---PTRASFCESVEKAHSSQSDAARVAARLGIEVEPFRIDSQCKYAAVARGDASIYLRLPTRKGYEEKIWDHAAGAMVITEAGGRVTDVRGDELDFSIGRTL-RDNLGVIVTNGRLHDRVVAAVRS 325          
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: A0A5J4Z461_PORPP (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z461_PORPP)

HSP 1 Score: 253 bits (645), Expect = 2.260e-73
Identity = 157/350 (44.86%), Postives = 201/350 (57.43%), Query Frame = 1
Query:  685 VATYAVQVASIVARELQAELCKQGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPVSLAAVLEVV---RKALDPELTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAHDAR---GLLYSAALGEGTFVRALSGAGDDTRRVMVDHARRPCETR------VLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLPRWGYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVGIVATSGKIHGEVVRAV 1698
            VA   V  A  V+R +Q        +SK D+SPVTV DF+VQA+VLY L   FP + FIAEE++  LR DPV    VL+ V   RKA    L+ +++C AIDLG    G+L          TWVLDPIDGTKGF+R +Q+C+ALG L +G    G+LGCPNL             L+  A +   A    G ++ A + +       +   +      V    R CE +       +ESVEA H+SHG++A V S LG+   P+R+DSQ KYG LS G   I+LR PR GYVENIWDHAAG VV+  AGG V+D  G PLDFS G KL  ++ GIVAT+G +H  VV AV
Sbjct:   40 VAVDVVSRACAVSRRVQLGFQFGNQLSKNDASPVTVADFAVQALVLYELKSAFPEHVFIAEESAEPLRNDPVLAKYVLDAVNSGRKAGHALLSVSDICGAIDLGLHVGGDLKD--------TWVLDPIDGTKGFMRKQQYCIALGFLRNGIPSLGVLGCPNLP----------ERLENTATYEARAEVEGGSIFHAVVADHVAYMQSASVPEPLYNTPV----RVCEEKEAMMAVFMESVEAAHSSHGISAQVASLLGVSQPPVRMDSQVKYGSLSRGDATIFLRFPRGGYVENIWDHAAGVVVLSAAGGHVSDGTGAPLDFSKGRKLNNQM-GIVATNGVLHDAVVEAV 366          
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: A0A2D7I2V5_9DELT (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7I2V5_9DELT)

HSP 1 Score: 251 bits (640), Expect = 2.930e-73
Identity = 157/349 (44.99%), Postives = 202/349 (57.88%), Query Frame = 1
Query:  664 NYRDDMSVATYAVQVASIVARELQAELCKQGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQ-DPVSLAA-VLEVVRKALDPELTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAHDARGLLYSAALGEGTFVRALSGAGDDTRRVMVDHARRPCETRVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLP-RWGYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVGIVATSGKIHGEVVRAVE 1701
            +Y  +  +A  AV+ AS + R +Q EL    ++SK D SPVTV DF  QA+V + L    P    + EE +A LRQ +   LAA V+  V++++ PEL +AE+   ID G    G          GR W LDPIDGTKGFLR +Q+ VAL L+E G+ V G LGCPNL+V D   P G              RG L+ A  GEG+F+R L G   D + + V    R  +  + ESVEAGH+S    A V   LGI   P RIDSQCKY  ++ G   IYLRLP R  Y E IWDHA G++V+ EAGG+++D  G PLDFSLG  L R   G+V T+G +H EVV AV+
Sbjct:    2 SYSIERRLAVEAVERASRLCRRVQQELVSGSSLSKDDKSPVTVADFGAQAVVSHCLATALPDVPLVGEEDAAALRQPENEGLAAKVVSAVQESV-PELEKAEILNLIDRGTFEGG--------ASGRHWTLDPIDGTKGFLRLDQYAVALALIEDGELVMGALGCPNLLV-DAAQPEG-------------PRGCLFIAVKGEGSFMRPLDGG--DEQPIHVTDIDRGADANLCESVEAGHSSQSDTARVAEMLGISSPPFRIDSQCKYAAVARGDASIYLRLPTRKDYEEKIWDHAGGSMVVSEAGGRISDVDGQPLDFSLGRTL-RNNTGVVVTNGHVHDEVVAAVK 324          
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: A0A3M1P2I4_9BACT (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M1P2I4_9BACT)

HSP 1 Score: 250 bits (639), Expect = 3.730e-73
Identity = 148/346 (42.77%), Postives = 192/346 (55.49%), Query Frame = 1
Query:  664 NYRDDMSVATYAVQVASIVARELQAELCKQGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPVSLAAVLEVVRKALDPELTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAHDARGLLYSAALGEGTFVRALSGAGDDTRRVMVDHARRPCETRVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLPRWG-YVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVGIVATSGKIHGEVVRAV 1698
            NY+ +++ A  AV+ A  + RE+Q +L    ++ K D SPVT+ D   QAIV   L R FPG   + EE S  LR++      V  ++ + +DP + +A L  AID G +     AR         W LDPIDGTKGFLRGEQ+ VAL L+E G+ V G+LGCPNL +              +  H     G L  A  GEG ++  L G   +   V VD    P E R  ES+E  H SH V   +   +GI   P RIDSQCKY  ++ G   IY RLPR   Y E IWDHAAG VV++EAGGKVTD RG PLDFS G KL   + G+VAT+G +H   ++A+
Sbjct:    2 NYQKELTFAIEAVRKAGKLCREVQHKLVSADSMEKKDRSPVTIADLGSQAIVTLSLQRDFPGEMLVGEEDSTPLRENAELKERVHLLLAQFIDP-INDATLYEAIDFGNQDPNGTAR--------FWTLDPIDGTKGFLRGEQYAVALALIEQGQVVLGVLGCPNLPL--------------SYQHLEKGEGCLLYAVRGEGCWMEPLDGG--ERIPVKVDGFTNPAEARFCESIEKEHASHEVHEQISRVMGIHRPPFRIDSQCKYAAVARGDASIYFRLPRSSSYREKIWDHAAGVVVLEEAGGKVTDFRGFPLDFSCGKKLENNI-GLVATNGALHDLTLKAI 321          
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Match: A0A523IZW8_9BACT (3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A523IZW8_9BACT)

HSP 1 Score: 249 bits (637), Expect = 7.740e-73
Identity = 149/347 (42.94%), Postives = 202/347 (58.21%), Query Frame = 1
Query:  667 YRDDMSVATYAVQVASIVARELQAELCKQGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPVSLAA--VLEVVRKALDPELTEAELCAAIDLGGRGHGNLARERPERGGRTWVLDPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSALDANANHAHDARGLLYSAALGEGTFVRALSGAGDDTRRVMVDHARRPCETRVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYLRLPRW-GYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVGIVATSGKIHGEVVRAV 1698
            Y  ++++A  AV+ A  +   +Q+ L  +  + K D SPVTV DF VQAI+ + L + FP    +AEE SA L+ +     +  V E   K L PEL E E+ A ID G    G      PE  GR W LDPIDGTKGFLRG+Q+ VAL L+E+G+ V G+LGCPNL            A D     +H  +G ++SA +GEG++++      D  +++ V     P      ESVE+ H+SHG +  +   LG+   PIRIDSQCKY +L+ G   IYLRLP    YVE IWDHAAG ++++EAGG+VTD  G  LDFSLG  L     G+V T+G++H  V+ AV
Sbjct:    3 YDSELNIAIEAVKKACSLCITVQSSLVSEETMIKKDKSPVTVADFGVQAIICHELKKAFPNDPIVAEEDSADLKTEEGKALSQKVFEYASKVL-PELKEEEIHATIDSGDYDGG------PE--GRFWTLDPIDGTKGFLRGQQYAVALALVENGEVVLGVLGCPNL------------ARDLEKPESH--KGAIFSAVIGEGSYIQFFEDISD--KKINVSDIDHPTLAPFCESVESAHSSHGDSKQIAQILGVTAEPIRIDSQCKYAVLARGDASIYLRLPTSKDYVEKIWDHAAGYIIVKEAGGRVTDILGSDLDFSLGRTLSNNK-GVVGTNGELHDLVISAV 323          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5632.13159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRW8_9PHAE5.970e-25257.043'(2'),5'-bisphosphate nucleotidase n=2 Tax=Ectoca... [more]
A0A4D9D727_9STRA2.580e-8545.633'(2'),5'-bisphosphate nucleotidase n=2 Tax=Monodo... [more]
A0A7S3AAM8_9RHOD4.760e-7946.293'(2'),5'-bisphosphate nucleotidase n=4 Tax=Rhodos... [more]
R7QQQ1_CHOCR2.970e-7540.783'(2'),5'-bisphosphate nucleotidase n=1 Tax=Chondr... [more]
A0A7C8CU36_9DELT2.080e-7445.113'(2'),5'-bisphosphate nucleotidase n=1 Tax=Myxoco... [more]
A0A2D5ZT17_9BACT1.970e-7345.143'(2'),5'-bisphosphate nucleotidase n=1 Tax=Gemmat... [more]
A0A5J4Z461_PORPP2.260e-7344.863'(2'),5'-bisphosphate nucleotidase n=1 Tax=Porphy... [more]
A0A2D7I2V5_9DELT2.930e-7344.993'(2'),5'-bisphosphate nucleotidase n=1 Tax=Deltap... [more]
A0A3M1P2I4_9BACT3.730e-7342.773'(2'),5'-bisphosphate nucleotidase n=1 Tax=Caldit... [more]
A0A523IZW8_9BACT7.740e-7342.943'(2'),5'-bisphosphate nucleotidase n=1 Tax=Candid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5632contigH-paniculata_contig5632:3028..9935 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score611.3
Seed ortholog evalue6.1e-172
Seed eggNOG ortholog2880.D7FJF3
KEGG rclassRC00078
KEGG koko:K01082,ko:K15422,ko:K21398
KEGG TC2.A.55.2.1,2.A.55.2.2
KEGG ReactionR00188,R00508,R03393,R03427
KEGG Pathwayko00562,ko00920,ko01100,ko01120,ko01130,ko04070,ko04142,ko04216,ko04978,map00562,map00920,map01100,map01120,map01130,map04070,map04142,map04216,map04978
KEGG ModuleM00131
Hectar predicted targeting categoryother localisation
EggNOG free text desc.3'(2'),5'-bisphosphate nucleotidase activity
EggNOG OGsCOG1218@1,KOG1528@2759
Ec32 ortholog descriptionInositol monophosphatase
Ec32 orthologEc-14_006130.1
EC3.1.3.57,3.1.3.7
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03016
Exons11
Model size2287
Cds size2286
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930599.6032598-CDS-H-paniculata_contig5632:3027..33621622930599.6032598-CDS-H-paniculata_contig5632:3027..3362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 3028..3362 +
1691481366.07902-CDS-H-paniculata_contig5632:3027..33621691481366.07902-CDS-H-paniculata_contig5632:3027..3362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 3028..3362 +
1622930599.6173422-CDS-H-paniculata_contig5632:4094..43811622930599.6173422-CDS-H-paniculata_contig5632:4094..4381Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 4095..4381 +
1691481366.091407-CDS-H-paniculata_contig5632:4094..43811691481366.091407-CDS-H-paniculata_contig5632:4094..4381Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 4095..4381 +
1622930599.6353037-CDS-H-paniculata_contig5632:4605..47471622930599.6353037-CDS-H-paniculata_contig5632:4605..4747Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 4606..4747 +
1691481366.1009946-CDS-H-paniculata_contig5632:4605..47471691481366.1009946-CDS-H-paniculata_contig5632:4605..4747Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 4606..4747 +
1622930599.6506555-CDS-H-paniculata_contig5632:4995..53381622930599.6506555-CDS-H-paniculata_contig5632:4995..5338Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 4996..5338 +
1691481366.111216-CDS-H-paniculata_contig5632:4995..53381691481366.111216-CDS-H-paniculata_contig5632:4995..5338Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 4996..5338 +
1622930599.664159-CDS-H-paniculata_contig5632:5646..57741622930599.664159-CDS-H-paniculata_contig5632:5646..5774Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 5647..5774 +
1691481366.1228626-CDS-H-paniculata_contig5632:5646..57741691481366.1228626-CDS-H-paniculata_contig5632:5646..5774Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 5647..5774 +
1622930599.6772022-CDS-H-paniculata_contig5632:6405..66551622930599.6772022-CDS-H-paniculata_contig5632:6405..6655Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 6406..6655 +
1691481366.131868-CDS-H-paniculata_contig5632:6405..66551691481366.131868-CDS-H-paniculata_contig5632:6405..6655Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 6406..6655 +
1622930599.689892-CDS-H-paniculata_contig5632:6837..69181622930599.689892-CDS-H-paniculata_contig5632:6837..6918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 6838..6918 +
1691481366.1405153-CDS-H-paniculata_contig5632:6837..69181691481366.1405153-CDS-H-paniculata_contig5632:6837..6918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 6838..6918 +
1622930599.7033043-CDS-H-paniculata_contig5632:7510..75851622930599.7033043-CDS-H-paniculata_contig5632:7510..7585Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 7511..7585 +
1691481366.149583-CDS-H-paniculata_contig5632:7510..75851691481366.149583-CDS-H-paniculata_contig5632:7510..7585Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 7511..7585 +
1622930599.7177227-CDS-H-paniculata_contig5632:8007..80931622930599.7177227-CDS-H-paniculata_contig5632:8007..8093Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 8008..8093 +
1691481366.1625116-CDS-H-paniculata_contig5632:8007..80931691481366.1625116-CDS-H-paniculata_contig5632:8007..8093Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 8008..8093 +
1622930599.7289894-CDS-H-paniculata_contig5632:9115..93071622930599.7289894-CDS-H-paniculata_contig5632:9115..9307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 9116..9307 +
1691481366.179879-CDS-H-paniculata_contig5632:9115..93071691481366.179879-CDS-H-paniculata_contig5632:9115..9307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 9116..9307 +
1622930599.7593873-CDS-H-paniculata_contig5632:9568..99351622930599.7593873-CDS-H-paniculata_contig5632:9568..9935Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 9569..9935 +
1691481366.188631-CDS-H-paniculata_contig5632:9568..99351691481366.188631-CDS-H-paniculata_contig5632:9568..9935Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5632 9569..9935 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5632.13159.1prot_H-paniculata_contig5632.13159.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5632 3028..9935 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5632.13159.1

>prot_H-paniculata_contig5632.13159.1 ID=prot_H-paniculata_contig5632.13159.1|Name=mRNA_H-paniculata_contig5632.13159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=762bp
MPSVKFVCDISNAVCTQQTRACPQIRAERTHKILRPHHTKWSISRAVLLD
AFSILSTSCGTASRYQGLIAKSAGEQGGVQPEQQLATPPHAHQHELHVVV
RFPRHDVNAERRLHSLATAIETEHGGRVAMEGRVAVEEACVVNLDTPTGL
SNEDDCADTISTNVPMFVFEKSGLAIDEYHAYGSTAYEDEVQKRVKAALS
LSRSKDASTLKELWSPDVTGGNYRDDMSVATYAVQVASIVARELQAELCK
QGAISKMDSSPVTVGDFSVQAIVLYILNRYFPGYGFIAEETSAVLRQDPV
SLAAVLEVVRKALDPELTEAELCAAIDLGGRGHGNLARERPERGGRTWVL
DPIDGTKGFLRGEQFCVALGLLESGKAVAGILGCPNLVVGDDVLPPGNSA
LDANANHAHDARGLLYSAALGEGTFVRALSGAGDDTRRVMVDHARRPCET
RVLESVEAGHTSHGVAANVCSDLGIDLAPIRIDSQCKYGLLSEGQGGIYL
RLPRWGYVENIWDHAAGAVVIQEAGGKVTDSRGMPLDFSLGAKLPREVVG
IVATSGKIHGEVVRAVESRQVEDWARIIAEAKRRGWENGDVAPPLPGVDW
SFGLEEGVDRLDDERWSSAVVQQQPLVMRTSGQFYGALERGWDKVVAVLF
HGSWTQESQHAVGLLQHLAWRRHQHQGPGSSSRVAPQATNYRRADIAGKG
TDRLMADVVFAEADVMTLIDVADRQAIAALPSVHLHLGGREVLRFPVKRD
ESVESVGAKIDE
back to top

mRNA from alignment at H-paniculata_contig5632:3028..9935+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5632.13159.1 ID=mRNA_H-paniculata_contig5632.13159.1|Name=mRNA_H-paniculata_contig5632.13159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6908bp|location=Sequence derived from alignment at H-paniculata_contig5632:3028..9935+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCAGTGTCAAGTTTGTCTGTGACATCTCAAATGCCGTTTGTACACA GCAGACCCGAGCTTGCCCACAAATCAGAGCCGAGCGTACTCATAAAATCT TGCGTCCACACCATACCAAATGGTCAATCTCCCGCGCCGTGCTCCTGGAC GCATTTTCTATTCTATCGACAAGTTGTGGGACCGCTAGTAGATATCAAGG ACTGATCGCGAAGTCAGCGGGGGAGCAGGGGGGGGTACAGCCAGAGCAAC AGCTGGCAACGCCCCCGCACGCGCATCAGCACGAGCTGCATGTTGTCGTA CGGTTTCCGAGGCACGATGTCAATGCCGAGAGGAGGTGAGAAAAGGTTGC AGCTGCTGGCTTTGAGAATTAGTTCAACGAGGAGCTCCCGCTCAGCCTCT TTCTTCCAGTGCGACACCCGTACCCTATCTGGATTTCAGTACACTTGAAC TTGAAGTATCATAACAGGGAACACCAGGTAAGTAGAGCCAGTGTACAGTC AGGCAATAAGGCAGCTAGTTTCTTGTCGATTGGTAACACCACGTACTTCG TACAACCATTCGTCAAAAACCAGGGTATTAACCTGCAAGTTTCCGACACA GCTGGATCTATTTTTCTCCTCCTTTGATTGTTGGAAAGAGGGCGTTTGCG AAAACAAAACGACTTCAAGAGACGGAAAAGTGGGCTAGACTCTTCTACTT ACAGCTCTCGAGGCATGTGACATCGATAACTCCTCCTCCAATCGGACAAA AACATCGATAAACATCTAATAATCAAGTTTCCGACGACGAAAGATTCGAT GCCTGTAAGATGCATTTGAAATATAGATCGGGAGGATGGAGAGATGTCTA TGAACGACGTCGTAGAAGTTGAGCCTTCAGCTGGATACTCCACTACCCCC TGATTGAACACTGTGTTGAACTTCTGTAATATGGTACTTCAAAGATTGAA CCGGCTGGAAGTGGAGCCAGTGTGCAGTGGGAAATTATTGTTTCATAAAC TGTGGAGCCCATACCTCGCCTCCTGAGTCCAAGCGGGTTCGTTTCCCACG ATCGATTGTTGAAACAGATTGCATTCCCTCGCGACGGCGATAGAGACTGA GCATGGGGGCAGGGTCGCAATGGAGGGTCGTGTGGCGGTAGAAGAAGCGT GTGTTGTCAATTTAGACACGCCGACCGGGTTGTCTAATGAAGACGATTGC GCAGATACCATCAGCACCAATGTCCCCATGTTCGTGTTCGAGAAGTCGGG TCTCGCGATAGACGAGTACCACGCGTACGGCAGCACCGCCTACGAGGACG AGGTACAAAAGAGGGTGAAAGCTGCGCTCTCGCTTTCTCGGTCGAAGGAC GCATGTGAGTCGACAACCACAGCACTTTCGGCGTATTTTTCGCCGCAATG ATTCTTGTGTACTTAATGCACGCTGTAGATGATGCACGCTGTAGATGATG CACTGCCTACTCCTGTACTGTCTGTTTCACGGTCGATATTGTTCTCGTCA AATCTGCCACTTTGTCGGTGTTGGTAAACTGAACTTTTATGTGACTTTTC CTGTGCCCGATTTCTTGGTCGTGTGCAGCGACCCTGAAAGAGCTATGGTC TCCCGACGTAACGGGCGGAAACTATCGTGACGATATGTCAGTGGCAACCT ATGCTGTTCAAGTGGCCAGTATTGTTGCACGAGAGCTGCAGGCAGAGCTA TGCAAGCAAGGCGCCATAAGGTACTGCTACGTGCGTATATGCAAGGGGTA CACTACTCCTCGCACGTAGCCTGGTGTCAGTGCTGGTTTGTGTTGTGCAA TAAGCCCAGCACCGCACACCAAGCACTCGTTCCCAGTAGTTACATTGGGC AATAGCCCAATAACGACACGCCTCCTTGCGGCGAATGATCGAAACTTCCG TACTGACACCCAGTCCTTCCTCGCGTTGTTCCATGTACGTGAATCCACCG TCTGTCCCTACTTGTCAGCAAAATGGACTCCTCTCCCGTTACCGTCGGCG ACTTCAGCGTCCAAGCCATCGTCCTGTACATCCTCAACCGTTACTTTCCC GGATACGGTTTCATCGCAGAAGAGACCTCCGCAGTTCTCCGACAAGACCC TGTCTCTCTCGCCGCCGTTTTGGAGGTTGTGAGGAAGGCTTTAGATCCAG AACTCACCGAGGCTGAACTGTGTGCAGCAATCGACCTCGGCGGCAGAGGC CACGGAAACCTCGCGCGGGAGCGCCCGGAGCGGGGAGGGCGAACTTGGGT ACTCGACCCTATCGATGGCACGAAAGGTTTCCTCAGGGGGGAACAATTCT GTGTGGCCTTGGTGAGAGGAGGCAGGATTTTCTGGGCTGTTGCGCGGGAA GCGGCTGCGGAGATCCATGGGGCTTTTCGTGATGTGATTGATTTTCGCAG TGCGCTGAAACTTGCGTTAACGAGGTGCTTCTACTGACAGGAGGTTAGGG GAAGTCTGGGGTCGCTAGTGACGCTCTCTGTGCGGCTTTCTCTGCAGGGA CTTGACTGTTGGCTTCAATTTTGAGTCTGCTCTTGAGGAGAAAAAAGGTT TTCGTTTGCCCTTCCTTCACCCCGTTCTTCACCCCGTCGCCTCGGTACTA CCAAATACTCGTATTTCAGGGTCTCTTGGAAAGCGGCAAGGCGGTCGCGG GAATTTTGGGCTGTCCGAACCTCGTAGTTGGCGATGACGTTCTCCCACCG GGGAACAGTGCACTGGATGCGAATGCGAACCATGCACATGATGCCAGGCG AGTTATTCGGCGCGGGCTGTAGTTTTAGCGCTACCGCAATATGCACGCAA CTTCAAATCGAAGACACGCCTCGATATGTGATGTTGCGGAAGTGGGAAGT CAAGTGGAAACCCTGCTAGGTCCCCTGACATATGGTCAAGTATTTACAAG GCGAAAGAAGCACTTCCGTTGGTCTTCTCCTCTAAATAGATCAATAATAA ACACCTCCAACACATCACAATCCCGTACTTAACGCACGTGCCCCTTCAAA TAAAATACAAAAACCAACCACAATCCTCCGGTCGTAACCAACAACCCAAG TCAACCAACTAGCACTTTATTTATTAAGATCTATATTATAATGAGCCCCA ATAAATTGATTTTACATATTACCCTCACCGTCATGTTCCCTCGTATGCAG CTCCCCGGAAATCCCTCACCACGCCGCTCTTACATTGCCAAGCCCCAGTT GCTAGACATCAAAGCGGGTATCACCCGGCTGACGAGTGCTATCGATCTAG CCTTTGTTTTTCTCTTGAACCCAACCTCTTCACGATGCTGTTTATCCTCG CACTGTCAAAGACGCGCACTCTTGAGGCAACTCCTGGATGAACAGCAATC TTCCTTATCGCCTTCTCCTGAAAAGCAGGGGGCTACTTTACAGCGCAGCT CTTGGAGAAGGCACGTTCGTACGGGCGCTCTCGGGCGCGGGCGACGACAC CCGAAGGGTTATGGTGGACCATGCTAGGCGGCCATGTGAGACTCGAGTGT TGGAGTCTGTCGAAGCTGGACACACGTCGCACGGGGTGGCCGCGAATGTG TGCTCGGACCTGGGGATAGATCTTGCCCCGATTAGGATAGACAGCCAATG CAAGTACGGCCTGCTCTCTGAGGGACAGGTAAGAGTTCAGTGTTGAGTGT TTTTCCTTGTGATGTTTTTGAGAAGGCCGGGCGCTTGGCTGCTGTTGAAA CGGATTGAGTTGATCCGCTCTCTAGACTTGTATATCTTTACCCCCGCAGC CCGCAACGGAGATAGCTGTGTTGTGGTATTTACTCGGAACAACCCTAACG TTGTTGACAGGGGGGTATCTATCTGCGCCTGCCACGGTGGGGCTATGTGG AGAATATATGGGACCACGCGGCAGGAGCCGTTGTTATTCAGGTAAGCCTG CCTTGCAGTATTCTACACTATTAAGTGCTGTCCTTATCGCCGTATATGGC CCAATGATACGCCAAGCTCAAGTCTTCTACGGGCAGCTGCCTGGTTTCCT TCGAATGGTTTGATCTGTTTCATGTCACGCAACAGGACTGCTGCACTCTA CTGTGTTTTTAGCCCCAGTGTTAGTGAGTAGAATGCATTACGTGATAACG ATGGATTTGCTGTGAAAAAGTCAGGTGAAGCAAGATTGCCTGGTTTTAAG ACTGCCTTTTTCGGATCGCCCTCCCCCCCTCCCCCAAGTATTAATGCCTG TACTGCTGTCGATGTAAGAGATATATGGAGCTTCAGCTACAGTCTCCGAG AGTATTAGAGGGTATTGAAGAAAAAGAGTACAGGCCCTAAATTGCGTCAC TTGGTTGTGATCCTATGGCCCTTGTCAATGGTTGAAATATTTAAATTATG TACTTGATATAACATATATCATCCTGCAGTAAAGATCCCAAATTAATGGC GCGCGAGAGGGGAACGTAGCATTCGGCTGAGATCAAGCGTTCTATCCAGC CTCACTGTCGTTCGGTCATTACTTGCTTGACAGGAGGCCGGAGGTAAGGT GACCGACAGCCGAGGGATGCCGCTGGACTTTTCTCTCGGGGCCAAACTTC CGAGGGAGGTATGTCCGTGTTGCAGTTAAAAAAGCCGCTTGCGGGAAGGA TAGTGATGATCTCAGAGAAGAGTGTGTTGTGGAGTCATTCCGTGGCAGGC TTACCGATGGAGCGGTTCCACGTGGAAAGGTCCCAAGTGGGGAGATATCA TTGGGAATTCAGTACAAGAGCATTGATTATGGGTCAGCAATTTATGTGGT CGCGGGTTCCGTGTTGATATGAGACCTAGTTCGATGCGCTGAAACGGGTC TTTCCGAAGCACACTTCTCCGAAAATTGAATGTGTCCTCGCTCGAGGGAG AGTCCAATCACGTGTTCGATGAAGACCTATTTTCACGGCACGCCGAGCTA GGTGCACTCACTGTGCATTTACCTGCACAGCCTTCGCGTTAACCACATTT GCGTCGAACCGAATGTATAAAACGCCCCAGGTGGTGGGTATCGTCGCCAC AAGCGGGAAGATACACGGGGAGGTCGTTCGCGCCGTAGAATCTAGACAGG TGGAAGACTGGGCAAGGTGAGCATTGACCGGTTCGCAGCGGTCCAGATGT TAGAGGTGCGCCGTGACCCACCTTCATGAACATACGCGCTTTTAGCCATC GTCATATCCCTCGAGTACACACAATGTAGCCCATCATCTGCGAGCGACGT AGTTTTGTGTTAACTCTTTCAGCGCGACTTGGTCATGATCCTGTGCTCCT TGTTCATGGTTGAGAGCTGTAAAGCTATGTATATACTCGAGTAATATGCA ATCGTTCCTGGGATAAAGATCCCAAATGAGTGGTGCTGAAAAAGGTTAAC CCTTCATGCACTACGTTTGATTATTCTGAACATGTGGAGTTGACAGTTCA GTGTCCTTGCGGGGGGTGACATATGAAAGGGGGCGAGAGGTGTGAGGGGG ATCGGTGAAACTTGGAAAACGGCCAGTACGACGTGCGTGGACGAACTACA ATCGGACCATCGCAGCGGTATTTGTGTTGTGCTCGTTTCTCGTGTTGGCT GAACCGCGACCACAGCGAACCACTCAGAGTTAACCTGGATTTTCCTGGAA ATACTCTGCCCTCTCACCATCATGGTGACGTGGGCTGTTGTGCTCTGTTG AAGGGCATGAAGCATGGAGTGATGGGTTACATTGAGGTGCCGTCTTTTAT TTTGCTGCCATGGCGTGAGAACACGACACAGTCAGAGCACGATAGCCGAA GGCAACACACCATCTCTCACTCCCTTATCATTCGGCTGTCTGTATTTTAG AGTCTAAGTGCCGGCTTGACTAAATTATAACGCTACAATATAACTATATA TATTCCTGGCACCCGGGCTGAATTTCCCAGTATCTGTATACAGGCGTTGT CATATAAAAGCCTAGAAAGATGCGTTCCTTCCATATGTTCGGTATGATAT ATCTACCATTCGTTTGGGATTGTGGTGCCAAAAAAATTCAAGAGCGATAC CAGATATATTGTCTTGTCGGGTTAGAGATTTTTCGTGGAGGTGTGACAAT AACTTTGTGTACCTTCCCGCTCTCTCGGATACTTGCAGAATTATCGCGGA GGCCAAACGCCGGGGTTGGGAAAATGGGGACGTGGCACCACCCCTTCCCG GAGTGGACTGGTCGTTCGGTTTGGAAGAGGGCGTCGATAGGCTTGACGAT GAGCGGTGGTCGTCGGCTGTGGTGCAGCAGCAACCTTTGGTCATGCGGAC AAGCGGGCAGTTCTATGGTGCCCTTGAGCGGTGAGGCTGCCATTAGGAAA TAATTGATAGCTACGTGTTAATGTGGTGTGGGGTGCGACATTTCGAAGTC ATCGTGAGCCCCCCACACGTTTCGGCTCAAACACCATCCAGTCTCGACTG TGCCCCCTTTATGGCACTTCATGTACTACTCGCCGAACTTGTATAGTGTT GTACATATGTTCGGCTGATATGCTTGACCTCACGCTCGCCAACTTCCCCC ACTGTCATATTGTGAAAAACAAACTATTGTCATTTTTACAGAGGCTGGGA TAAGGTGGTTGCGGTGCTCTTTCATGGCAGCTGGACGCAGGAGTCCCAAC ACGCGGTGGGCCTTTTACAACACCTCGCCTGGCGGCGGCACCAACATCAG GGGCCGGGCTCCTCATCAAGAGTCGCGCCGCAAGCCACCAACTACCGCAG AGCCGACATCGCGGGCAAGGGTACCGATAGACTAATGGCGGATGTAGTCT TCGCGGAGGCCGACGTTATGACTCTAATCGATGTTGCGGATCGACAAGCG ATCGCTGCGCTACCCTCGGTGCACCTACACTTGGGGGGGCGGGAGGTCTT GAGATTCCCAGTCAAGCGAGACGAGAGTGTCGAGTCAGTGGGTGCCAAGA TAGACGAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5632:3028..9935+

>mRNA_H-paniculata_contig5632.13159.1 ID=mRNA_H-paniculata_contig5632.13159.1|Name=mRNA_H-paniculata_contig5632.13159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4572bp|location=Sequence derived from alignment at H-paniculata_contig5632:3028..9935+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCAGTGTCAAGTTTGTCTGTGACATCTCAAATGCCGTTTGTACACA
GCAGACCCGAGCTTGCCCACAAATCAGAGCCGAGCGTACTCATAAAATCT
TGCGTCCACACCATACCAAATGGTCAATCTCCCGCGCCGTGCTCCTGGAC
GCATTTTCTATTCTATCGACAAGTTGTGGGACCGCTAGTAGATATCAAGG
ACTGATCGCGAAGTCAGCGGGGGAGCAGGGGGGGGTACAGCCAGAGCAAC
AGCTGGCAACGCCCCCGCACGCGCATCAGCACGAGCTGCATGTTGTCGTA
CGGTTTCCGAGGCACGATGTCAATGCCGAGAGGAGATGCCCAGTGTCAAG
TTTGTCTGTGACATCTCAAATGCCGTTTGTACACAGCAGACCCGAGCTTG
CCCACAAATCAGAGCCGAGCGTACTCATAAAATCTTGCGTCCACACCATA
CCAAATGGTCAATCTCCCGCGCCGTGCTCCTGGACGCATTTTCTATTCTA
TCGACAAGTTGTGGGACCGCTAGTAGATATCAAGGACTGATCGCGAAGTC
AGCGGGGGAGCAGGGGGGGGTACAGCCAGAGCAACAGCTGGCAACGCCCC
CGCACGCGCATCAGCACGAGCTGCATGTTGTCGTACGGTTTCCGAGGCAC
GATGTCAATGCCGAGAGGAGATTGCATTCCCTCGCGACGGCGATAGAGAC
TGAGCATGGGGGCAGGGTCGCAATGGAGGGTCGTGTGGCGGTAGAAGAAG
CGTGTGTTGTCAATTTAGACACGCCGACCGGGTTGTCTAATGAAGACGAT
TGCGCAGATACCATCAGCACCAATGTCCCCATGTTCGTGTTCGAGAAGTC
GGGTCTCGCGATAGACGAGTACCACGCGTACGGCAGCACCGCCTACGAGG
ACGAGGTACAAAAGAGGGTGAAAGCTGCGCTCTCGCTTTCTCGGTCGAAG
GACGCATATTGCATTCCCTCGCGACGGCGATAGAGACTGAGCATGGGGGC
AGGGTCGCAATGGAGGGTCGTGTGGCGGTAGAAGAAGCGTGTGTTGTCAA
TTTAGACACGCCGACCGGGTTGTCTAATGAAGACGATTGCGCAGATACCA
TCAGCACCAATGTCCCCATGTTCGTGTTCGAGAAGTCGGGTCTCGCGATA
GACGAGTACCACGCGTACGGCAGCACCGCCTACGAGGACGAGGTACAAAA
GAGGGTGAAAGCTGCGCTCTCGCTTTCTCGGTCGAAGGACGCATCGACCC
TGAAAGAGCTATGGTCTCCCGACGTAACGGGCGGAAACTATCGTGACGAT
ATGTCAGTGGCAACCTATGCTGTTCAAGTGGCCAGTATTGTTGCACGAGA
GCTGCAGGCAGAGCTATGCAAGCAAGGCGCCATAAGCGACCCTGAAAGAG
CTATGGTCTCCCGACGTAACGGGCGGAAACTATCGTGACGATATGTCAGT
GGCAACCTATGCTGTTCAAGTGGCCAGTATTGTTGCACGAGAGCTGCAGG
CAGAGCTATGCAAGCAAGGCGCCATAAGCAAAATGGACTCCTCTCCCGTT
ACCGTCGGCGACTTCAGCGTCCAAGCCATCGTCCTGTACATCCTCAACCG
TTACTTTCCCGGATACGGTTTCATCGCAGAAGAGACCTCCGCAGTTCTCC
GACAAGACCCTGTCTCTCTCGCCGCCGTTTTGGAGGTTGTGAGGAAGGCT
TTAGATCCAGAACTCACCGAGGCTGAACTGTGTGCAGCAATCGACCTCGG
CGGCAGAGGCCACGGAAACCTCGCGCGGGAGCGCCCGGAGCGGGGAGGGC
GAACTTGGGTACTCGACCCTATCGATGGCACGAAAGGTTTCCTCAGGGGG
GAACAATTCTGTGTGGCCTTGCAAAATGGACTCCTCTCCCGTTACCGTCG
GCGACTTCAGCGTCCAAGCCATCGTCCTGTACATCCTCAACCGTTACTTT
CCCGGATACGGTTTCATCGCAGAAGAGACCTCCGCAGTTCTCCGACAAGA
CCCTGTCTCTCTCGCCGCCGTTTTGGAGGTTGTGAGGAAGGCTTTAGATC
CAGAACTCACCGAGGCTGAACTGTGTGCAGCAATCGACCTCGGCGGCAGA
GGCCACGGAAACCTCGCGCGGGAGCGCCCGGAGCGGGGAGGGCGAACTTG
GGTACTCGACCCTATCGATGGCACGAAAGGTTTCCTCAGGGGGGAACAAT
TCTGTGTGGCCTTGGGTCTCTTGGAAAGCGGCAAGGCGGTCGCGGGAATT
TTGGGCTGTCCGAACCTCGTAGTTGGCGATGACGTTCTCCCACCGGGGAA
CAGTGCACTGGATGCGAATGCGAACCATGCACATGATGCCAGGGTCTCTT
GGAAAGCGGCAAGGCGGTCGCGGGAATTTTGGGCTGTCCGAACCTCGTAG
TTGGCGATGACGTTCTCCCACCGGGGAACAGTGCACTGGATGCGAATGCG
AACCATGCACATGATGCCAGGGGGCTACTTTACAGCGCAGCTCTTGGAGA
AGGCACGTTCGTACGGGCGCTCTCGGGCGCGGGCGACGACACCCGAAGGG
TTATGGTGGACCATGCTAGGCGGCCATGTGAGACTCGAGTGTTGGAGTCT
GTCGAAGCTGGACACACGTCGCACGGGGTGGCCGCGAATGTGTGCTCGGA
CCTGGGGATAGATCTTGCCCCGATTAGGATAGACAGCCAATGCAAGTACG
GCCTGCTCTCTGAGGGACAGGGGGCTACTTTACAGCGCAGCTCTTGGAGA
AGGCACGTTCGTACGGGCGCTCTCGGGCGCGGGCGACGACACCCGAAGGG
TTATGGTGGACCATGCTAGGCGGCCATGTGAGACTCGAGTGTTGGAGTCT
GTCGAAGCTGGACACACGTCGCACGGGGTGGCCGCGAATGTGTGCTCGGA
CCTGGGGATAGATCTTGCCCCGATTAGGATAGACAGCCAATGCAAGTACG
GCCTGCTCTCTGAGGGACAGGGGGGTATCTATCTGCGCCTGCCACGGTGG
GGCTATGTGGAGAATATATGGGACCACGCGGCAGGAGCCGTTGTTATTCA
GGGGGGTATCTATCTGCGCCTGCCACGGTGGGGCTATGTGGAGAATATAT
GGGACCACGCGGCAGGAGCCGTTGTTATTCAGGAGGCCGGAGGTAAGGTG
ACCGACAGCCGAGGGATGCCGCTGGACTTTTCTCTCGGGGCCAAACTTCC
GAGGGAGGAGGCCGGAGGTAAGGTGACCGACAGCCGAGGGATGCCGCTGG
ACTTTTCTCTCGGGGCCAAACTTCCGAGGGAGGTGGTGGGTATCGTCGCC
ACAAGCGGGAAGATACACGGGGAGGTCGTTCGCGCCGTAGAATCTAGACA
GGTGGAAGACTGGGCAAGGTGGTGGGTATCGTCGCCACAAGCGGGAAGAT
ACACGGGGAGGTCGTTCGCGCCGTAGAATCTAGACAGGTGGAAGACTGGG
CAAGAATTATCGCGGAGGCCAAACGCCGGGGTTGGGAAAATGGGGACGTG
GCACCACCCCTTCCCGGAGTGGACTGGTCGTTCGGTTTGGAAGAGGGCGT
CGATAGGCTTGACGATGAGCGGTGGTCGTCGGCTGTGGTGCAGCAGCAAC
CTTTGGTCATGCGGACAAGCGGGCAGTTCTATGGTGCCCTTGAGCGAATT
ATCGCGGAGGCCAAACGCCGGGGTTGGGAAAATGGGGACGTGGCACCACC
CCTTCCCGGAGTGGACTGGTCGTTCGGTTTGGAAGAGGGCGTCGATAGGC
TTGACGATGAGCGGTGGTCGTCGGCTGTGGTGCAGCAGCAACCTTTGGTC
ATGCGGACAAGCGGGCAGTTCTATGGTGCCCTTGAGCGAGGCTGGGATAA
GGTGGTTGCGGTGCTCTTTCATGGCAGCTGGACGCAGGAGTCCCAACACG
CGGTGGGCCTTTTACAACACCTCGCCTGGCGGCGGCACCAACATCAGGGG
CCGGGCTCCTCATCAAGAGTCGCGCCGCAAGCCACCAACTACCGCAGAGC
CGACATCGCGGGCAAGGGTACCGATAGACTAATGGCGGATGTAGTCTTCG
CGGAGGCCGACGTTATGACTCTAATCGATGTTGCGGATCGACAAGCGATC
GCTGCGCTACCCTCGGTGCACCTACACTTGGGGGGGCGGGAGGTCTTGAG
ATTCCCAGTCAAGCGAGACGAGAGTGTCGAGTCAGTGGGTGCCAAGATAG
ACGAGAGGCTGGGATAAGGTGGTTGCGGTGCTCTTTCATGGCAGCTGGAC
GCAGGAGTCCCAACACGCGGTGGGCCTTTTACAACACCTCGCCTGGCGGC
GGCACCAACATCAGGGGCCGGGCTCCTCATCAAGAGTCGCGCCGCAAGCC
ACCAACTACCGCAGAGCCGACATCGCGGGCAAGGGTACCGATAGACTAAT
GGCGGATGTAGTCTTCGCGGAGGCCGACGTTATGACTCTAATCGATGTTG
CGGATCGACAAGCGATCGCTGCGCTACCCTCGGTGCACCTACACTTGGGG
GGGCGGGAGGTCTTGAGATTCCCAGTCAAGCGAGACGAGAGTGTCGAGTC
AGTGGGTGCCAAGATAGACGAG
back to top