mRNA_H-paniculata_contig5611.13131.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: D7G6B0_ECTSI (KH type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B0_ECTSI) HSP 1 Score: 414 bits (1064), Expect = 1.780e-141 Identity = 214/221 (96.83%), Postives = 217/221 (98.19%), Query Frame = 1
Query: 259 SKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEMVMEVTPNFG 921
SKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRF+F DDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPK PLSDVITILPPKEE+ +E TPNFG
Sbjct: 2 SKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEATPNFG 222
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: A0A7S2UUD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUD3_9STRA) HSP 1 Score: 378 bits (970), Expect = 3.890e-127 Identity = 194/225 (86.22%), Postives = 210/225 (93.33%), Query Frame = 1
Query: 244 MATNQSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEMVMEVTPNF 918
MA+N SKKRKFVADGVFYAELN+LLT ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRF+F DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV+V+GKLRAQRAK+MKFRDGYMIKSG + +YVD+AVRHV+MRQGVLGV VSIMLPHDPTGK GPKIPLSDV+TIL PKE+ V++ TP+
Sbjct: 1 MASNISKKRKFVADGVFYAELNQLLTSELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFNFADDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVVVSGKLRAQRAKSMKFRDGYMIKSGAAQREYVDYAVRHVLMRQGVLGVKVSIMLPHDPTGKTGPKIPLSDVVTILEPKEDAVLQPTPDI 225
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: A0A6V2VE19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VE19_HETAK) HSP 1 Score: 370 bits (950), Expect = 4.000e-124 Identity = 192/224 (85.71%), Postives = 208/224 (92.86%), Query Frame = 1
Query: 244 MATNQSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEMVMEVTPN 915
MA N SKKRKFVADGVFYAELNELLT+ELAE+GYAG+EVR TP+RTEIII ATR Q+VLGEKGQRIRELTSVVQKRF+FNDDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRAQRAKAMKFRDGYMIKSG+ +DYVD+AVRHV+MRQGVLGV VSIM+ HDP+GK GPK PLSDVITIL PKEE+ + TP+
Sbjct: 1 MAPNISKKRKFVADGVFYAELNELLTRELAEDGYAGLEVRTTPIRTEIIIRATRTQSVLGEKGQRIRELTSVVQKRFNFNDDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAQRAKAMKFRDGYMIKSGQASKDYVDYAVRHVLMRQGVLGVKVSIMMQHDPSGKTGPKKPLSDVITILEPKEEIELPPTPS 224
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: A0A836CGW2_9STRA (Prokaryotic type K homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW2_9STRA) HSP 1 Score: 369 bits (948), Expect = 7.480e-124 Identity = 193/225 (85.78%), Postives = 204/225 (90.67%), Query Frame = 1
Query: 244 MATNQSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEMVMEVTPNF 918
M TN SKKRKFVADGVFYAELNEL+ +ELAE+GY+GVEVRVTPLRTEIII AT+PQNVLGEKGQRIRELTSVVQKRFSF D+AVELYAERVA RGLCAQTQAESLKYKL+GGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRA RAKAMKF DGYMIKSGR DYVD AVRHV MRQG+LGV V IMLPHDPTGKEGPK PLSDVITIL PKEE +E TP +
Sbjct: 1 MTTNISKKRKFVADGVFYAELNELMRRELAEDGYSGVEVRVTPLRTEIIIRATQPQNVLGEKGQRIRELTSVVQKRFSFPDNAVELYAERVAVRGLCAQTQAESLKYKLVGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAARAKAMKFADGYMIKSGRATVDYVDRAVRHVAMRQGMLGVIVRIMLPHDPTGKEGPKTPLSDVITILEPKEEAPLEATPVY 225
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: W7TS51_9STRA (40s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS51_9STRA) HSP 1 Score: 351 bits (900), Expect = 2.570e-116 Identity = 180/234 (76.92%), Postives = 202/234 (86.32%), Query Frame = 1
Query: 244 MATNQSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEMVMEVTPNFG*SHSSTSG 945
M TN SKKRKF+ADGVFYAELNELLT+ELAE+GYAGVEVRV PLRTEIIISATR QNVLGEKGQRIRELT+V+QKRF+F D VEL+AE+VA RGLCAQ QAESLKYKLLGGLAVRRACYGVLRF+ME GAKGAEVIV+GKLRAQRAK+MKF+DGYMIKSG+ + +YVD+AVRHV+MRQGVLGV V IMLPHDP GK GPK LSDV+ +L PKEE+ + V S+ G
Sbjct: 1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLGEKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACYGVLRFVMEQGAKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQGVLGVKVKIMLPHDPAGKIGPKAKLSDVVNVLEPKEEIELPVPEPVTMSYGGMGG 234
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: F0YDG3_AURAN (KH type-2 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YDG3_AURAN) HSP 1 Score: 347 bits (889), Expect = 7.770e-115 Identity = 182/220 (82.73%), Postives = 196/220 (89.09%), Query Frame = 1
Query: 259 SKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEMVMEVTPNF 918
SKKRKFVADG+FYAELNELLT+ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRF F D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRACYGV+RF+MESGAKG EV+V+GKLRAQRAKAMKF DGYMIK+G + +YVD AVRHV+MRQGVLGV VSIMLPHD +GK GPK L+DV+TIL PKEE M V NF
Sbjct: 5 SKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACYGVVRFVMESGAKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQGVLGVKVSIMLPHDASGKTGPKNTLADVVTILEPKEEAPMPVA-NF 223
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: A0A7S2RY40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY40_9STRA) HSP 1 Score: 339 bits (869), Expect = 1.480e-111 Identity = 176/231 (76.19%), Postives = 197/231 (85.28%), Query Frame = 1
Query: 205 LHLLNYVFP*AVAMATNQSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEMV 897
LH + P +A N SKKRKFVADGVFYAELNE L +ELAEEGYAGVE+R TP+RTEIII ATR Q+VLGEKG+RIRELTSVVQKRF+F D AVELYAERVA +GLCAQ QAESLKYKL+GGLAVRRACYGVLRFIMESGA GAEV V+GK R QRAKAMKF+DGYMIK+G+V ++YVD AVRHV+MR GVLGV V IMLPHDP G +GPK PLSD ITI+ PKEE++
Sbjct: 6 LHRRRRLPPCTMANTQNISKKRKFVADGVFYAELNEFLIRELAEEGYAGVEIRATPIRTEIIIRATRTQSVLGEKGRRIRELTSVVQKRFNFADGAVELYAERVANKGLCAQAQAESLKYKLIGGLAVRRACYGVLRFIMESGANGAEVTVSGKARGQRAKAMKFQDGYMIKTGKVAQEYVDTAVRHVLMRLGVLGVRVEIMLPHDPKGIQGPKTPLSDKITIIEPKEEVI 236
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: M4B627_HYAAE (KH type-2 domain-containing protein n=26 Tax=Eukaryota TaxID=2759 RepID=M4B627_HYAAE) HSP 1 Score: 335 bits (859), Expect = 4.790e-110 Identity = 172/217 (79.26%), Postives = 192/217 (88.48%), Query Frame = 1
Query: 244 MATNQSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEM 894
MA N SKKRKFVADGVFYAELNELL +EL +GY+GVEVRVTP+RTEIII ATR Q VLGEKGQRIR LTSVVQKRF+F D AVELYAERVA RGLC+Q QAESLKY+LLGGLAVRRACY V+RF+ME+GAKG +VIV+GKLRAQRAKAMKF +GYM+K+G ++YVD AVRHVMMRQGVLGV VSIMLPHDPTGK+GPK L DV+TIL PKEE+
Sbjct: 1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLGEKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACYSVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVMMRQGVLGVKVSIMLPHDPTGKQGPKRALDDVVTILEPKEEV 217
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: A0A7S2PJ71_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PJ71_9STRA) HSP 1 Score: 334 bits (857), Expect = 6.550e-110 Identity = 171/212 (80.66%), Postives = 187/212 (88.21%), Query Frame = 1
Query: 259 SKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEM 894
S KRKFVADGVFYAELNELLT ELAE+GYAGVEVR TP RTE+II ATR QNVLGEKGQRIRELTSVVQKRF F D AVELYAERVA RGLCAQ QAESLK+KLLGGLAVRRACYGV+RF+ME+ AKG EVIV+GKLR QRAKAMKF DGYMIK+G + Y D AVRHVM+RQG++GV VSIMLPHDP+GK+GPKIPL D +TIL PKEE+
Sbjct: 5 STKRKFVADGVFYAELNELLTSELAEDGYAGVEVRTTPHRTEVIIRATRTQNVLGEKGQRIRELTSVVQKRFDFADGAVELYAERVANRGLCAQAQAESLKFKLLGGLAVRRACYGVVRFVMEANAKGVEVIVSGKLRGQRAKAMKFCDGYMIKTGHAGQVYTDTAVRHVMLRQGIIGVRVSIMLPHDPSGKDGPKIPLDDAVTILEPKEEV 216
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Match: A0A024UIL6_9STRA (40S ribosomal protein S3 n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UIL6_9STRA) HSP 1 Score: 334 bits (857), Expect = 7.030e-110 Identity = 173/217 (79.72%), Postives = 194/217 (89.40%), Query Frame = 1
Query: 244 MATNQSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFSFNDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKIPLSDVITILPPKEEM 894
MA N SKKRKFVADGVF+AELNELL +ELAE+GYAGVEVRVTPLRTE+II AT+ Q VLGEKGQRIRELTSVVQKRF+F D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRA GVLRF++E+GAKG EVIV+GKLRAQRAKAMKF++G+M+K+G ++YVD AVRHV+MRQGVLGV VSIMLPHDPTG+ GPK L DV+TIL PKEE+
Sbjct: 1 MALNISKKRKFVADGVFFAELNELLQRELAEDGYAGVEVRVTPLRTEVIIRATKTQEVLGEKGQRIRELTSVVQKRFNFADGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRAAMGVLRFVLEAGAKGCEVIVSGKLRAQRAKAMKFKEGFMVKTGDANKEYVDTAVRHVLMRQGVLGVKVSIMLPHDPTGRMGPKRNLDDVVTILEPKEEV 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5611.13131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5611.13131.1 >prot_H-paniculata_contig5611.13131.1 ID=prot_H-paniculata_contig5611.13131.1|Name=mRNA_H-paniculata_contig5611.13131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp MATNQSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIIback to top mRNA from alignment at H-paniculata_contig5611:715..4215- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5611.13131.1 ID=mRNA_H-paniculata_contig5611.13131.1|Name=mRNA_H-paniculata_contig5611.13131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3501bp|location=Sequence derived from alignment at H-paniculata_contig5611:715..4215- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5611:715..4215- >mRNA_H-paniculata_contig5611.13131.1 ID=mRNA_H-paniculata_contig5611.13131.1|Name=mRNA_H-paniculata_contig5611.13131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1362bp|location=Sequence derived from alignment at H-paniculata_contig5611:715..4215- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |