mRNA_H-paniculata_contig5602.13123.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig5602.13123.1
Unique Name	mRNA_H-paniculata_contig5602.13123.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: A0A6H5KP90_9PHAE (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP90_9PHAE)

HSP 1 Score: 615 bits (1587), Expect = 8.300e-205
Identity = 384/813 (47.23%), Postives = 472/813 (58.06%), Query Frame = 1

Query:    1 GTSATEATVGITQFVGESSTGFSGILKQRYSDFIVKEVARDGEVSTAIDFPGLLRPF-HETHPMVHNNKNEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKESNVGD----------------------------------AVNKEQGNGAAAESEKQQEPEQEN-----------FETVVKAGVCTLLPVLGEEVTTKVEAFILEGLSMEGVDRRKLTLPSTDKSARTEVYNLLKKSLSKFILAVTVDEPSTDXXXXXXXXXXXXXXKVQDDDDGKDKTGKAKEGDNKDTPMTAGTTNEESKPSGNESNPANGAAADIAESTVEGGGGSDVT-------AAGNGAKPVAKAGTL------NPNRPKCVQIKMKPDWKK--HGNKRRRGDLEGRGRGGR--------VWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPKHVTQDIDMESTEIEPDLQLLD-GVDSPAADADSGGVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLPEVHVVTEEDVEKETFDVTEVVLPMPG 2229
            G  A E+TVGIT F+ E+ TGFSG+LKQRYSDFIV EV RDGEV    DFPGLLRP  HE  P    +                                   K     GD                                  AV+   G G                           +   K+G   LLPV+GE+V  KVEAF+LEGL + G D+R LTLP+ DK+ R +VY LLK++LSK++LAVTVD+P++                       K +T +AK+ ++ D   TAG ++++S   G       G   +   S   G  G           A    A   A AGT       +PN PKCVQ+KMKPDW+    GNKRRRGDL+  G            VWP   PE+CRFVLYKEN DTM AVSR+CK L+  +K +GYAGTKDKR +T+QWCT KRK+ EE+  FNRPL AF GSI L+G FSYV+EPLKLGDL GN F IVLRNL++P      A         A   + +  + + +E  +VE G +LK+ +D RC  VKE GFINYFGLQRFG+GGAPTSEVG+AMLKEDWAGAVRLIMTPR+GENEATH SKVHYLK PTD++GTL KLPFFM+AEK+MMQA+++GGP++HI AL+AVPKNLQLMYLHAFQSL+WNLAASER+KLYGRD  V GDLVFP+      D  +  IE D  L+D  + + A DA       E +GDGE+          +AKR++    SLP VHVVT+EDVE+ TF +T+VVLPMPG
Sbjct:    2 GERAKESTVGITHFITENDTGFSGVLKQRYSDFIVHEVTRDGEVCKGTDFPGLLRPIEHERQPPPPAHGQPTAAAAHKETPSDSTASPTAARGSDAVEDGSKDKDGEGKGDGEGSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDGSSGGGMXXXXXXXXXXXXXXXXXXXXXXXXXLKKQAKSGAEALLPVVGEQVAAKVEAFMLEGLGVTGKDKRTLTLPTADKNTRAKVYGLLKQNLSKYLLAVTVDDPASAPPPMAS----------------KTETFEAKDAEDGDAKATAGASDDKSGAGGEAPAAKEGNGTENPSSEKGGENGXXXXXXXXXEPAEKTAANTKASAGTPAAAKKPDPNGPKCVQLKMKPDWRNIDGGNKRRRGDLDRSGXXXXXXXXXRRWVWPEGRPEFCRFVLYKENSDTMGAVSRICKHLRFSSKVVGYAGTKDKRGVTAQWCTVKRKSIEELRSFNRPLGAFQGSIVLLGNFSYVAEPLKLGDLSGNRFGIVLRNLSLPSGGENGAXXXXXGGQDASADEASKKEAEYAEAAVVETGAKLKETVDRRCAWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRMGENEATHASKVHYLKNPTDIQGTLNKLPFFMDAEKSMMQALLKGGPNAHIDALKAVPKNLQLMYLHAFQSLLWNLAASERIKLYGRDAAVEGDLVFPR------DSPAAAIEDDATLVDPAIGAAAVDA------AERDGDGEDEGGEGQQP--EAKRAKTAETSLPPVHVVTKEDVEEGTFRLTDVVLPMPG 784

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: A0A4P1QUC6_LUPAN (TRUD domain-containing protein n=4 Tax=Lupinus TaxID=3869 RepID=A0A4P1QUC6_LUPAN)

HSP 1 Score: 218 bits (555), Expect = 1.410e-57
Identity = 151/433 (34.87%), Postives = 232/433 (53.58%), Query Frame = 1

Query:  934 KCVQIKMKPDWKKHGNKRR-RGDLEGRGRGGRVWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPKHVTQDIDMESTEIEPDLQLLDGVDSPAADADSGGVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLPEVHVVTEEDVEKETFDVTEVVLPMPG 2229
            KC++++ K +  ++  KR+ RG      RG   WP ++ ++ RF LYKEN DT  A+  +   L +  ++ G+AGTKDKRA+T+Q  T  +K   ++   N+ L         VG F YV+E L LG L GN F I LR + VP+  T               ++G  +D               +D I      + + GFINYFGLQRFG+G  PT  +G A+L+ +W  AV LI+ PR G+      ++ +Y K   DVEGTL++LP F+ AE+ ++Q++ +  P ++ QAL+++P+ L++MY+H++QS +WN AAS RV+ YG ++VV+GDLV+ K +     ME   +EP+      VD  +A  D+     E E  G+           D K S         V VVT E +    + + +V+LP+PG
Sbjct:  151 KCIRVRSKSEKGRNSKKRKERGGKPFDSRGSEDWPENVGKFLRFNLYKENKDTQEALGVIGNMLSVQPRSFGFAGTKDKRAVTTQRVTVYKKQASKLASLNKRLIGIK-----VGDFCYVNEGLLLGQLWGNRFTITLRFIFVPRALTYF-------------LRGIVSD--------------TEDTIKASADALGKRGFINYFGLQRFGSGSVPTHLIGAALLRGEWEVAVDLILDPRDGD--ILFIARKYY-KGSDDVEGTLKQLPRFLVAERAVLQSLKKS-PGNYQQALKSIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTEQVVLGDLVYSKEIPNGKVMEL--VEPEC-----VDDCSATYDNDNNNNEDEVSGDI---------HDEKNSN--------VKVVTSEVLNSGCYTIDDVILPLPG 523

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: A0A8J4AYV4_9CHLO (TRUD domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AYV4_9CHLO)

HSP 1 Score: 219 bits (558), Expect = 1.090e-56
Identity = 161/415 (38.80%), Postives = 222/415 (53.49%), Query Frame = 1

Query: 1006 GRGRGGRVWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPT-KTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTV----PKPATATAANGSEPQDYAGNIQGT-GADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPKH-VTQDIDMESTEIEPDLQLLDGVDSPAADADSGGVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLPEVHVVTEEDVEKETFDVTEVVLPMPG 2229
            GR RGG  W      + RFVLYKENMDT  A++ L + L +P     G+AGTKDKR +T Q+ TA + +   +   N  L         VG FS+  + L+LG L GN F +++R++ +    P  ATA A          G   GT GA   K E +++ +       + + C  V   GFINYFGLQRFGTGGA T EVG A+L+ ++  A RL++T R  E  A +        +  D +G LR+LP FM  E+ ++ A++   P     A+RAVP+ +++MYLHA+QS VWN +AS R++ YGRD+VV GDLV P+   T     ES      L+L  GVD         G  +E E DG E        G     SR+    L  V +VT+ DVE   +D+ +VVLP+PG
Sbjct:  379 GRRRGG-GWEGGKHSFVRFVLYKENMDTQVALTILSRHLGMPGGHNFGFAGTKDKRGVTCQFATAFKVSPFRLSAVNSHLRGIR-----VGNFSFCDDGLRLGCLLGNEFHLLMRDVRLVGSEPPAATAEAVTAE------GEEMGTEGASGTKVEVDVIGQ-------VTIACETVARSGFINYFGLQRFGTGGAATQEVGKALLRGEYERAARLVLTGRADER-ADYAEARKLFSEMGDAKGALRRLPHFMLGERAVL-AVLATNPTDWAGAMRAVPRTMRMMYLHAWQSYVWNSSASHRIRTYGRDRVVAGDLVLPRSGATASGGAES------LELGGGVDDS-------GEGMEAE-DGSE--------GSAGTVSRR----LALVRLVTDADVEAGRYDIFDVVLPLPG 746

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: A0A0D2SL97_GOSRA (TRUD domain-containing protein n=22 Tax=Gossypium TaxID=3633 RepID=A0A0D2SL97_GOSRA)

HSP 1 Score: 215 bits (548), Expect = 2.210e-56
Identity = 148/440 (33.64%), Postives = 217/440 (49.32%), Query Frame = 1

Query:  934 KCVQIKMKPDWKKHG---NKRRRGDLEGRGRGGRVWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPKHVTQDIDMESTEIEP----DLQLLDGVDSPAADADSG-GVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLPEVHVVTEEDVEKETFDVTEVVLPMPG 2229
            KC+++++    K  G   NKR+RGD     RG   WP  L  + RF L+KEN DT  A+  + K L I  ++ G+AGTKDKR++++Q  T  ++    +   N  L         VG F YV + L LG L GN F IVLR +      T  A+  S                                        +   GFINYFGLQRFG+G  PT  +G  +L+ +W  A   I+ PR GE      ++ +Y K+  D++GTL++LP  + AE+ M+Q + +  P +++QAL+A+P+ L++MY+H++QS +WN AAS RV+ YG  +VV+GDLV+ K      D E TE+ P    D  L D  D    D  SG  + LE                         + +L  V V+T  D+    +++ +VVLPMPG
Sbjct:  187 KCIRVRLNSGNKNKGRNSNKRKRGDRPYDSRGSSHWPAHLGNFLRFHLFKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQYASRLAALNDRLIGIK-----VGDFCYVKDDLLLGQLLGNRFTIVLRGVVADSEDTIQASAES----------------------------------------LGRHGFINYFGLQRFGSGSIPTHHIGATLLRGEWKAAASTILDPREGERNIISKAREYY-KQTGDIDGTLKQLPRHLVAERAMLQCLKKS-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKYGSSEVVLGDLVYSKGD----DAEKTEVVPPEHEDNSLEDAYDCGQLDEISGKDLPLE-------------------------KNNL--VKVITASDISTGNYNIEDVVLPMPG 548

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: A0A6J1KMR0_CUCMA (multisubstrate pseudouridine synthase 7 isoform X1 n=4 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KMR0_CUCMA)

HSP 1 Score: 214 bits (545), Expect = 4.730e-56
Identity = 149/445 (33.48%), Postives = 219/445 (49.21%), Query Frame = 1

Query:  934 KCVQIKMKPDWKKHGNK-----RRRGDLEGRGRGGRVWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPK--HVTQDIDMESTEIEPDLQLLDGVDSPAADADS-GGVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLP-----EVHVVTEEDVEKETFDVTEVVLPMPG 2229
            KCV++++    + +  +     + RGD     RG   WP  + ++ RF LYKEN DT  A+  + K L I T++ G+AGTKDKRAIT+Q  T  ++    +   N  L         +G FSY+ E L LG L GN F I LR +                                            +D I      +   GFINYFGLQRFG+G  PT  VG ++L+ +W GAV +I+ PR GE     +++ +Y K+  D++GTL++LP ++ AE+ ++Q + +  P +++QAL+A+P+ L++MY+H++QS +WN AAS RV+ YG DKVVVGDLV+ K  H       +S E          VD    DA++     LE                        C   LP      V  V+ EDV+   F + +VVLP+PG
Sbjct:  184 KCVRVRVDSGLQNNRGRVSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRAITTQRVTVFKQHASRLAALNDRLIGIK-----LGNFSYIQEGLLLGQLLGNRFTITLRGVVADS----------------------------------------EDTIKTSAEALGRLGFINYFGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGETNVIAEAR-NYYKESNDIDGTLKQLPRYLVAERAILQCLKKC-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKENHTATAAVQKSEE---------NVDEDCGDANTYDSCHLE----------------------EICTLDLPTERNKHVKAVSAEDVQSGNFTIDDVVLPLPG 550

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: A0A067JUI6_JATCU (TRUD domain-containing protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JUI6_JATCU)

HSP 1 Score: 212 bits (540), Expect = 4.900e-56
Identity = 142/437 (32.49%), Postives = 214/437 (48.97%), Query Frame = 1

Query:  934 KCVQIKMKPDWKKHGNK-----RRRGDLEGRGRGGRVWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPKHVTQDIDMESTEIEPDLQLLDGVDSPAADADSGGVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLPEVHVVTEEDVEKETFDVTEVVLPMPG 2229
            KC++I++     K+G +     + RGD     RG   WP  L ++ RF LYKEN DT  A+S + K L +  ++ G+AGTKDKRAI++Q  T  ++    +   N  L         VG F +V E L LG L GN F + LR +                                            +D I      +   GFINYFGLQRFG+G  PT  +G A+ + +W   V +I+ PR GE +A   ++ +Y K+  D+EGTLR+LP ++ AE+ ++Q + +  P ++ QAL+++P+ L++MY+H++QS +WN AAS RV+ YG D+VVVGDLV+ K    + D E    + + +  DG      D  +                     G D    +        V  VT ED+    ++V +V+LPMPG
Sbjct:  194 KCIRIRLNSGGHKNGGRNSKKRKERGDKPFDSRGSDDWPEHLGKFLRFHLYKENKDTQEAMSLIGKMLGLQPRSFGFAGTKDKRAISTQRVTVFKQHASRLAALNDRLIGIK-----VGDFCHVKEGLLLGQLLGNRFTVTLRGVVADS----------------------------------------EDTIKRSADSLGRNGFINYFGLQRFGSGSVPTHLIGAALFRGEWKNVVSMILDPREGERDAVRKAREYY-KETGDIEGTLRQLPRYLIAERAILQCLKKC-PGNYSQALKSIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDQVVVGDLVYCK----ENDTEKDAADFNSECEDGSCGDIYDCSN----------------LDETTGTDCPERKNAL-----VKAVTAEDISTGNYNVDDVILPMPG 558

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: A0A067DBE6_CITSI (TRUD domain-containing protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067DBE6_CITSI)

HSP 1 Score: 210 bits (534), Expect = 5.940e-56
Identity = 141/425 (33.18%), Postives = 207/425 (48.71%), Query Frame = 1

Query:  982 KRRRGDLEGRGRGGRVWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPKH---------VTQDIDMESTEIEPDLQLLDGVDSPAADADSGGVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLPEVHVVTEEDVEKETFDVTEVVLPMPG 2229
            ++ RGD     RG   WP  L ++ RF LYKEN DT  A+  + K L I  ++ G+AGTKDKR++++Q  T  ++   ++   N+ L         +G F YV E L LG L GN F I LR + V                                          +D+I      +   GFINYFGLQRFG+G  PT  VG  +L+ +W  AV++I+ PR GE      ++ +Y K+  D++GTLRKLP  + AE+ ++Q + +  P +++QAL+A+P+ L++MY+H++QS +WN AAS RV+ +G + VVVGDLVF K          V  + + ES+    D   LD V  P  D   G                              R +L  V  VT  D+    + + +VVLP+PG
Sbjct:    8 RKERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIR-----LGDFCYVKEGLLLGQLLGNRFTITLRGVVVDS----------------------------------------EDVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYY-KETDDIDGTLRKLPRHLVAERAILQCLKKC-PGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEV--PETDHPDG------------------------------RHNL--VKTVTAADINSGKYTIDDVVLPLPG 351

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: UPI000B795F5D (multisubstrate pseudouridine synthase 7-like isoform X2 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B795F5D)

HSP 1 Score: 210 bits (534), Expect = 1.120e-55
Identity = 143/439 (32.57%), Postives = 216/439 (49.20%), Query Frame = 1

Query:  934 KCVQIKMKPDWKKHG--NKRRRGDLEGR---GRGGRVWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPK--HVTQDIDMESTEIEPDLQLLDGVDSPAADADSGGVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLPEVHVVTEEDVEKETFDVTEVVLPMPG 2229
            KC+++++ P    +G  N ++R D  G+    RG   WP  L ++ RF LYKEN DT  A+  + K L I  ++ G+AGTKDKR++++Q  T  R+    +   N  L         VG F +V E L LG L GN F + LR +      T   +  S                                        +   GFINYFGLQRFG+G  PT  +G A+L+ +W  A  +I+ PR GE +    ++ +Y ++  D+EGTLR+LP  + AE+ ++Q M +  P +++ AL+A+P+ L++MY+H++QS +WN AAS RV+ YG D+VVVGDLV+ K     ++    ++E E D    D  D    D  SG    E +                         + P V  VT ED+    + + +V+LPMPG
Sbjct:  155 KCIRVRLNPGGHNNGGRNSKKRKDRSGKPFDSRGSYHWPEHLGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFRQHASRLAALNDRLIGIK-----VGNFCHVKEGLVLGQLLGNRFTVTLRGVIADSETTIKGSADS----------------------------------------LGRHGFINYFGLQRFGSGSVPTHLIGAALLRGEWKSAASMILDPREGERDVVRKAREYY-RESNDIEGTLRQLPRHLIAERAILQCMKKC-PGNYLLALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKYGIDRVVVGDLVYCKGDDTARETSGFNSECE-DHSCDDMYDCSNLDETSGTYVPEWK-------------------------NTP-VKAVTAEDISSGNYTIDDVILPMPG 519

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: A0A1S3CHJ1_CUCME (pseudouridylate synthase 7 homolog isoform X1 n=10 Tax=Benincaseae TaxID=1003877 RepID=A0A1S3CHJ1_CUCME)

HSP 1 Score: 213 bits (542), Expect = 1.230e-55
Identity = 151/445 (33.93%), Postives = 220/445 (49.44%), Query Frame = 1

Query:  934 KCVQIKMKPDWKKHGNK-----RRRGDLEGRGRGGRVWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPK--HVTQDIDMESTEIEPDLQLLDGVDSPAADADS-GGVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLPE-----VHVVTEEDVEKETFDVTEVVLPMPG 2229
            KCV++++    + +  +     + RGD     RG   WP  + ++ RF LYKEN DT  A+  + K L I T++ G+AGTKDKR+I++Q  T  ++    +   N  L         +G FSY+ E L LG L GN F I LR +          AN                                +D+I      +   GFINYFGLQRFG+G  PT  VG ++L+ +W GAV +I+ PR GE      ++ +Y K+  D++GTL++LP ++ AE+ ++Q + +  P +++QAL+A+P+ L++MY+H++QS +WN AAS RV+ YG DKVVVGDLV+ K  H        S E E         D    DA+S     LE                        C+  LP      V  VT EDV    F + +VVLP+PG
Sbjct:  184 KCVRVRVDSGVQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAALNDRLIGIK-----LGNFSYIQEGLLLGQLLGNRFTITLRGVV---------ANS-------------------------------EDVIKASAEALGTHGFINYFGLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGETNEIAKAREYY-KESDDIDGTLKQLPRYLVAERAILQCLKKC-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKENHTETAAVQNSEEYE---------DEDCGDANSYDSCHLE----------------------EMCKLGLPTERNKLVKAVTAEDVLSGNFTIDDVVLPLPG 550

[Close]

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Match: UPI001922DB83 (LOW QUALITY PROTEIN: multisubstrate pseudouridine synthase 7-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001922DB83)

HSP 1 Score: 213 bits (542), Expect = 1.360e-55
Identity = 143/435 (32.87%), Postives = 216/435 (49.66%), Query Frame = 1

Query:  934 KCVQIKMKPDWKKHGN---KRRRGDLEGRGRGGRVWPNDLPEYCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAKRKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRNLTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIIDLRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPRLGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSHIQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPKHVTQDIDMESTEIEPDLQLLDGVDSPAADADSGGVALEGEGDGEEXXXXXXXXGRDAKRSRKCRESLPEVHVVTEEDVEKETFDVTEVVLPMPG 2229
            KC+++++       G    KR+RGD     RG   WP  L ++ RF L+KEN DT  A+  + K L I T++ G+AGTKDKR++++Q  T  ++    +   N  L         +G F YV + L LG L GNHF I LR +      T  A+  S                                        +   GFINYFGLQRFG+G  PT  +G  +L+ +W  A  +I+ PR GE      ++ +Y K+  D++GTLR+LP  + AE+ M+Q + +  P +++QAL+A+P+ L++MY+H++QS +WN AAS RV+ YG ++VV+GDLV+     +  D E  ++ P     +  D    DAD      E  G                K     + +L  V V+T  D+   T+ + +VVLPMPG
Sbjct:  192 KCIRVRLNSGNNNRGGNFKKRKRGDKPFDSRGSSHWPEHLGKFLRFHLFKENKDTQEALGLIGKMLAIQTRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIK-----MGDFCYVKDDLLLGQLLGNHFTITLRGVVADSEDTIKASAES----------------------------------------LGRHGFINYFGLQRFGSGSIPTHHIGATLLRGEWKAAASIILDPREGERNIISKAREYY-KETGDIDGTLRQLPRHLVAERAMLQCLKKC-PGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKYGSNEVVLGDLVY----IEGDDAEKMKVVP----FENEDDSIEDADDCSQLDEISG----------------KNLPLEKNNL--VKVITAADISAGTYTIEDVVLPMPG 553

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5602.13123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KP90_9PHAE	8.300e-205	47.23	TRUD domain-containing protein n=2 Tax=Ectocarpus ...	[more]
A0A4P1QUC6_LUPAN	1.410e-57	34.87	TRUD domain-containing protein n=4 Tax=Lupinus Tax...	[more]
A0A8J4AYV4_9CHLO	1.090e-56	38.80	TRUD domain-containing protein n=1 Tax=Volvox afri...	[more]
A0A0D2SL97_GOSRA	2.210e-56	33.64	TRUD domain-containing protein n=22 Tax=Gossypium ...	[more]
A0A6J1KMR0_CUCMA	4.730e-56	33.48	multisubstrate pseudouridine synthase 7 isoform X1...	[more]
A0A067JUI6_JATCU	4.900e-56	32.49	TRUD domain-containing protein n=2 Tax=Jatropha cu...	[more]
A0A067DBE6_CITSI	5.940e-56	33.18	TRUD domain-containing protein n=1 Tax=Citrus sine...	[more]
UPI000B795F5D	1.120e-55	32.57	multisubstrate pseudouridine synthase 7-like isofo...	[more]
A0A1S3CHJ1_CUCME	1.230e-55	33.93	pseudouridylate synthase 7 homolog isoform X1 n=10...	[more]
UPI001922DB83	1.360e-55	32.87	LOW QUALITY PROTEIN: multisubstrate pseudouridine ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5602	contig	H-paniculata_contig5602:446..9601 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	634.0
Seed ortholog evalue	8.6e-179
Seed eggNOG ortholog	2880.D7G805
Preferred name	PUS7
KEGG ko	ko:K06176,ko:K08831
Hectar predicted targeting category	other localisation
GOs	GO:0000154,GO:0000455,GO:0001522,GO:0002682,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005732,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006417,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009982,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016556,GO:0016853,GO:0016866,GO:0017148,GO:0019222,GO:0019899,GO:0022613,GO:0031118,GO:0031119,GO:0031120,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031429,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034470,GO:0034641,GO:0034660,GO:0040031,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045595,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051171,GO:0051172,GO:0051239,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0072588,GO:0080090,GO:0090304,GO:1901360,GO:1901532,GO:1902036,GO:1902494,GO:1903706,GO:1990481,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000380,GO:2000736
EggNOG free text desc.	pseudouridine synthase activity
EggNOG OGs	COG0585@1,KOG2339@2759
Ec32 ortholog description	tRNA Pseudouridine Synthase D domain-containing protein
Ec32 ortholog	Ec-06_009680.1
EC	2.7.11.1,5.4.99.27
COG Functional cat.	L
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko01000,ko01001,ko03016,ko03041
Exons	9
Model size	2232
Cds size	2232
Stop	1
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5602.13123.1	prot_H-paniculata_contig5602.13123.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig5602 446..9601 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig5602:446..9601-
coding sequence from alignment at H-paniculata_contig5602:446..9601-

protein sequence of mRNA_H-paniculata_contig5602.13123.1

>prot_H-paniculata_contig5602.13123.1 ID=prot_H-paniculata_contig5602.13123.1|Name=mRNA_H-paniculata_contig5602.13123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=744bp
GTSATEATVGITQFVGESSTGFSGILKQRYSDFIVKEVARDGEVSTAIDF
PGLLRPFHETHPMVHNNKNEDKNNNKDNDDGNNNANDKKDQSNTTDNDPD
PDKKESNVGDAVNKEQGNGAAAESEKQQEPEQENFETVVKAGVCTLLPVL
GEEVTTKVEAFILEGLSMEGVDRRKLTLPSTDKSARTEVYNLLKKSLSKF
ILAVTVDEPSTDDNPPTSDTPVERETKVQDDDDGKDKTGKAKEGDNKDTP
MTAGTTNEESKPSGNESNPANGAAADIAESTVEGGGGSDVTAAGNGAKPV
AKAGTLNPNRPKCVQIKMKPDWKKHGNKRRRGDLEGRGRGGRVWPNDLPE
YCRFVLYKENMDTMSAVSRLCKFLKIPTKTLGYAGTKDKRAITSQWCTAK
RKAQEEVMMFNRPLAAFHGSISLVGKFSYVSEPLKLGDLKGNHFEIVLRN
LTVPKPATATAANGSEPQDYAGNIQGTGADDDKSEEEIVEEGKRLKDIID
LRCTMVKEGGFINYFGLQRFGTGGAPTSEVGIAMLKEDWAGAVRLIMTPR
LGENEATHDSKVHYLKKPTDVEGTLRKLPFFMNAEKNMMQAMMRGGPHSH
IQALRAVPKNLQLMYLHAFQSLVWNLAASERVKLYGRDKVVVGDLVFPKH
VTQDIDMESTEIEPDLQLLDGVDSPAADADSGGVALEGEGDGEEGDEEAE
EEGRDAKRSRKCRESLPEVHVVTEEDVEKETFDVTEVVLPMPG*

mRNA from alignment at H-paniculata_contig5602:446..9601-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig5602.13123.1 ID=mRNA_H-paniculata_contig5602.13123.1|Name=mRNA_H-paniculata_contig5602.13123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9156bp|location=Sequence derived from alignment at H-paniculata_contig5602:446..9601- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAACGAGTGCTACAGAGGCCACGGTAGGCATAACACAGTTTGTCGGCGA
GAGTAGCACGGGTTTTTCGGGGATCCTGAAGCAGCGCTACTCTGACTTCA
TCGTGAAAGAGGTGTATCTCGTGTATGTGTGTCGTCGTCCATCCTAAAGT
ACAATCTGTGTGTGGCAGTTGATAGTAGTCAGAGACTTCAGGTTTTATTC
TGTCGTAATCCACACATCTTGCAAAATTTTGTCATAGTCCATACATGTTA
CAAGACATCAAAAGTGAAAATTACTTTCCATCCTACATGTGGGATAGAGT
GGCTCTTTCGTGGCTAGCCCTTCTTGTGTTCACCAAGTCTGATGTTCGTC
CATTAATATTACCAGTACCTCCAACTCGTAACTCCTCAAGTAATTCTGAG
TTTCGTACGAGGCCGGCGCAAGAGAAACATGATCAAAACTTAGGTCAACT
CTGGTGATTGATTGATGGTACCGTCATGGAGGGCCGAAACAATCATATTT
GTTCCTTATTGAGTAAGGATATCACCATGGGGATTGCCACCGTAACCACC
CTACCATACGCGTATTCCATCCCCAGGTCGCAAGAGATGGCGAAGTGAGC
ACAGCCATCGACTTCCCGGGCCTACTACGACCCTTCCATGAGACGCACCC
CATGGTGCATAACAACAAGAACGAAGACAAAAACAACAATAAGGACAACG
ATGACGGCAACAACAATGCCAATGACAAAAAGGACCAAAGCAACACCACC
GACAACGACCCCGATCCCGACAAGAAGGAAAGTAATGTAGGCGACGCTGT
GAACAAGGAGCAGGGCAATGGAGCAGCAGCTGAGAGTGAGAAGCAGCAAG
AGCCGGAACAGGAGAATTTTGAGACGGTGGTCAAGGCCGGCGTTTGCACT
CTGTTGCCCGTGCTAGGAGAGGAGGTCACGACGAAGGTAACATGAGCTGT
TCTCCTATACATTGTCCCTCGTGTTTTGCGGTGGGGAGGTAATTTTGGGT
GATGATCATTTGGGAACCGTTGTTTTCTTAGGAGTCAAGCATGGGAAAGT
TGTGCCTACATGCTGACGTTTTGGAAGATTTCTTTCAGCTGCACACTCGA
GTTACTTCTGAAAACAGATGTTCATGGGGACATCTGTGCCTACATGCGAG
CGCAGCGTGTGCGTGGGGTCATGACATAGATTTTGGGCTAATAATCAAGT
GAAAACACTGGCTGGATGGGCCTAGGCGTCACATAAGTAATAGCAGGTAG
TGATGTTGATGATAGGCAATACATAATATGACACTTGACGTATCAGTAGC
GCAATGTCGCTGTGTGCTTCTGGCCTTGTTGTCCTCAAGCTTTAGATAGG
GTTTTGGTCATTCGTGTTGATATTTATAATGGAACTCGTTTGTGCGTCCA
TCTTTTTTGCCTTCCTTTACTGGCTTGTGCCGCAATGCCTCAAATGAAGC
ATGTACTTGTACTCTCCACCTCACATTTTGCGTTCTCTTTTCTCCGGCAC
TGCAATGCCGTGCTTTGAGTGTGGAATCGGTTGACTTGGTCGATAACCCG
CAGCTGGACGGCATGTTACCGAAAAATGTCAAGCTTCCTCGCGCGTGTAT
AAACCCCCCACATTACATGATATCCAGTTGACCTTTCGCTTCTGCAATGC
AACAGAAGAGCTAAATCTCAGCTCTTGAATCACCTTGGCTATCCCGTGGA
CTACTAACTTGAAAGTTTTCCCCACCCCCCCCGCGGGATGTGTAAATATT
TCAAGTCAGATGTCACACATAACTTTCGTGTCCTGTTTTGATTTGTCTGA
GGTCGAACAACTTGTAGGTTGAAAAAAACTCATGCTTGCTCTGTCAGAAC
CAGAAGTAACGGGTTTGACCTCATGATGGTCTGAGTTGCGTGATAACGAC
TTGTAAACGTTCCAACTAGCCTTGTCCTGAATGATAGATGTAGCCTCGAG
CCGTACGCTCAACGACATTTTGTGCAAATATAGGCTTTTGAGTGTGTGCG
TAAGGTGTGTACATACGCCAATATTTTGAAGGAATAACAGTCACGCCGTT
CAGCGAACATCTGATAAAAAAAACACACTTATAAATATTGCCATGATCTA
AATAGATTTTCACAGGTGGTGAAATCCGCCCAGAATGTCGTGTATCTGAC
TTTGACTGTTGTCTTTCACGCCTGGTGTTGCCATGATGTATTATGTGGGA
TGTGTCGTGCAGGTGGAGGCATTCATTTTGGAAGGGCTTAGTATGGAAGG
GGTGGACAGGCGGAAGCTGACTCTTCCCTCCACTGACAAGTCTGCTCGTA
CCGAGGTAAACAAAAAAACTCCCTGAGACATGAGTCGCTAGACCCATAAT
CAGAAAATTAAGTTTTTTTTCTTTTTCAGAGTCCCCTGAAAAGCGTGCTG
TAAAACGCTACACTTGAAACATGTATAACATGAGTATACATTCAAGTATG
ACCCAAGTATAACTCATACAGACGTACACTTCCAAAGCGTATGTTTTCAT
GTTCCTCGGAACGAGGTGTACGTTGTTGTCCTTGATTGGTCTTGCCCATA
CCGCCAACCTGTGTGGGTCTGTGGATCTATGCTATTTGTCCATGCCATCG
ACAGCGTTTCCTGTCGTTGAGCTAGTGTAACTAAGTTGCTCTTTCATCAC
GGCACCATTCCGCACTTGCGACAAGCAGCGTGTCACATCGTCATGTTTGC
TTGCGCGACAGTACAGTAGCACAGCAAGCGCAAAGCACTGTTGTTTCTTC
AGGACACCTAATATCGTCAAAAGGCGTTCTCGCTACCTAATTGTCTCCGT
GTGTGCCATTAGCTTGCCTTCAAGATGGCGGTGTTACCTACAACACACGT
TAGTACTTGAATGCATGTTCTCTGGGACTGTATATACAGCATCTTCCTAT
CTGTTTACCGTCAGAAATTGCTCGCTACCTAATCACCATCAGCAACCAAG
ATACCGTACGAATTGCACTAATGCATCTTCCTGTGCGTGCATGGGCACAG
TATCCCCCTCTGTGTTTGCCGTCGAAAATTGCTTGCCACCCAATGTTACA
CCCTTACATTACCTTCCGTGTGTGCTCGTGTCATCGTACGCTCCTGCACC
GTTGTTGACAGGTGTACAACCTCCTGAAGAAATCACTGAGCAAATTCATC
CTGGCAGTGACCGTGGACGAACCATCTACAGACGACAACCCCCCCACCTC
CGATACCCCGGTGGAGAGAGAAACCAAAGTGCAGGATGATGATGATGGCA
AGGACAAGACAGGCAAGGCCAAAGAAGGCGACAATAAAGACACACCAATG
ACTGCAGGTACTACGAACGAAGAAAGCAAACCCTCCGGAAACGAGAGCAA
TCCAGCCAACGGAGCGGCAGCTGACATAGCAGAGTCGACGGTTGAGGGTG
GTGGTGGTAGTGACGTGACTGCAGCGGGGAACGGAGCTAAGCCGGTGGCG
AAGGCAGGAACTCTCAACCCTAATCGCCCGAAGTGTGTGCAGATCAAGAT
GAAGCCGGACTGGAAGAAGCACGGAAACAAGCGTAGGAGAGGGGATCTCG
AGGGCAGGGGCCGTGGTGGCAGGGTGTGGCCGAACGACTTGCCGGAGTAC
TGTCGCTTCGTTTTGTACAAGGAGAACATGGATACTGTGCGTAGATGCTT
CTTACTGTAGACTAGTTATTGTAGGTAGACTACTTCTTGATTTTGATCTC
GTGTTGTTTTAATGCTGCTATTGCTACTGCTGCTTCTACTGCTGCTGCCA
CTGGGGCTACTTGTGTCGTTGTTCATGTTGTTGTTGCGGTCATGCCGAGC
GCATCGTGTTCTGATGTGTTGATGAGGTGTCATCAGTTGCGCGTTACACC
AACTTCGATACCCAGATCGTTTGCGCCTGACTGCCTGCCTTAGCGTGCGT
ACATTTTCGTTGAATTAATTATGAAATGGACAGCGCGCTATAGTTGGAGC
GTACTCGGTCTTTCCGTGTTCGTTTCGGACGAAGACAGATTCAAGAAAGA
TATTCGTTCTCATTAGATGAACGCCTCCAGTTAACGAACGGAATATAACG
ATGGTCGTAGCGAATGTCATCAAAGGGTTCAAATAAAGAGTCCAATGCAA
CATCCCCACGCGCCCTTGCTCTCGATTCCGTTTGTCGGAACTTGTTGCAA
CACAATACTATTGTGTGAATGATGACAGATGAGCGCGGTCAGTCGTTTGT
GCAAGTTCTTGAAAATACCGACAAAGACGCTGGGGTACGCAGGCACCAAG
GATAAGCGCGCGATCACGTCGCAGTGGTGCACGGCTAAGAGGAAGGCTCA
AGAAGAGGTCATGATGTTCAACCGCCCTCTCGCAGCTTTTCATGTAAGTC
ATATATTCATACACAGGCTTTTCTCCATGACCAGAACTAGAATCAGTTCA
CGTTCCGGTTCTTTCTAGCGTTTTTATCTTCAAACGGTTCGTCGTTCGGT
TCTGCAGTTTATTTTTTCTGGTAAAACTGGTTCATGGTCCGCTCCTTCCA
ACTTCCTGTCCGTCGGCCGTTGGTTTGGCTCCATCAGATTTCGCGGGCCA
TATCGTAGCGCGGATTTGTAGCGTACATTTACAAGAGGCCACCACGTCTA
CAGTACAATAGATTTGCGACGCGGCTTGTTTCGTTTTATTCCAATGACAA
GTATTTTTAGAGGTGCTTGGGTCTCTTTCATGCGAGTCAATGATGATGCA
TACTCGGTAAACTACTCAGGGCTAAATCAGGAGGAGAGTCCTCGAGAGTA
TCGCTGCCGGACTGGAAAGTCCATAGCCAGTATAAGGTAAAAAGTCCTGG
GGTTATTTGCGAGCACTGGCTAGCAAGCACTGTACTGTTCATCACTCAAG
CGACCAACCCCATTCAGCAAATCTGAGTGTCGTTCATCTGCGCTCGTTTC
CTCCCTCTCCATTCGAAGTGAAGCACCTCTTGGCTGAATTTCTTGACCAA
CCACAAATGTTCCCGATTCCTGCAGAGCGCAATTTTTCTCCACTAGGGTC
CCCTCGGCTGATGTGGATAGTGGTTTACCTGTTGGTCTATTGGCTTTGCC
CTGCTGTGATGGATGGAGTGGCTTCATGTGGTATGGTATTTTCATCACGT
TCGCCACGCTAGCCCTTGCTACCCCTCGCCCCCTTGGGATTGAACGGGAG
TCATTACCCATTGATGGCTATATCAAGCAGTCGTGTTTATTGGTTCGCGC
CGACGGGTGGTGTCTCACTGCTATGCTGAAGAGCTGCTGTATATACTGGG
CTTTTTAATGAGAACTTCCACTATCGTGAATTCCATTGCTATTTGGCGCC
CAACCGTTTGGTGAACATACACGATATCGTGCTGCAAAGCTCACGTTTTC
AGTGTGCTTATGTCTCGGCGGTCGATATTTTTTCAACCAATAGGGCTCTG
ATTTTGTCGTCACCCCTTTTTATGCAAGTATTGCCTTCGGAACTGTCCCC
TCGCGTCCCCGGTGCAAACGCTTCATTACTTGTCTACAATATGAAAAAAA
AAAAAAATGACGACACAAACACGGATGACAACCCATCTACAGCATGAGCT
AGACGGGGGTCGGCGGGGAAACGGTCACACGACCAATCATGAGCCTGGCT
CATGAAGGTGGCCAATGCAATGTTTCCGCCTAAAACGACAGTCCGAATAT
CGAATTTAAACGAGTCCGAATCGTTAGTCCGTCCATGAGAAAATGCATTT
TTCAGTTCGTCACTCAAATTGGATAGTGCGCAATAGGTGCCCTGTAGCTC
TCAGGCGTCATATACCATGCCATAAAACAACAGTGAGGTTCAAGCGAAGT
AGACTACAGTCATTAGACACATGTATGAAACATGTAACTCAGTAAGGTTT
GCCCGCCCCGGGCTCGCAAAGTTACAACAACGATGCGAGCACCATCGAAG
CTCAGGGTACAGTTGACAGCCAGTTTCAAACAAAATCCAGTTGCCCTAAA
TACTACGGACAATAAAGACAGACAGATAGTACAGACACATCGAGTCTGTA
AGAGGGTGTTGAAGCATGACAACGTTGAACTACACACAGTGCAGGTAGCA
GCACTGACATTTTGAACACCTCTGCTTTGGATGTGAGGCAGATGGTTGCA
TGTAATCTCAGAGCTACGAGCAGAGACCGTTACGTTGAGCGGACCACGTA
GTAAGTTGTTAGACCTGGGTTTTCTACCCATGAACGCGTAGCCTGGGACT
ACCACAGTAAGAGTTGTTTAGATTGAGTAAAGTTGATTCAACATTGGGCA
AGCAACAACAAATGGTGTCAGATTTTGTGGTCATCTTTCCATCCTAAAGC
TGTTAGTATGACATTGAGTAAAATTGATTCAACATTGGGCAAGCAACAAT
AAATGGTGTAAGATTTTGTGGCCATTTTTCCACCCTAAAGCTGTTAGTAT
GACACCGTTTGGACTGTCACTCGAGCAGGCATACTATGAAGCATCACGTC
GTATGGCACATGCTAAATGTCGAATGCGTCAGCCGTCCGCCACTATTTCG
GGTGTTTTCCCAGCATCTCGGGTCTGAGAAATCACTCACCAGATGAAATA
AATAGAAGAAAACTGGAAAGTCGTAACGTTGCCTTGGTTTCAAGTCGTCA
GTTTTTGTATGTCCAGTTTCAAAAGGTTAATATTCAGCTACAAATGCGTC
TTCCCACTCCTCGTGCCTTGGATGTACAGGGTTCGATATCGCTCGTAGGA
AAATTTTCGTACGTGTCGGAACCTCTGAAACTGGGCGATCTCAAAGGAAA
CCATTTCGAAATCGTGCTGAGAAACCTGACCGTGCCCAAGCCAGCAACAG
CAACAGCAGCAGTATCGGGACAATCGGAACAGAAAAGCAGCTCTATATCC
CCAACACCCGACACTAACACCACGGACACTAGTACTGCTGCAAGCAATGA
TGCTAACAGCGCCGGTGCCGATGACTCTAGCAACAACGATGCACAAAGCA
CGGCTGTTGCCAAGAACGGTTCGGAGCCCCAAGACTATGCGGGGAACATT
CAGGGAACCGGTGCCGATGATGACAAGTCCGAAGAAGAGATTGTGGAAGA
GGGAAAAAGGCTGAAAGATATCATCGACTTGCGCTGCACGATGGTGAAGG
AAGGCGGTTTTATCAATTATTTTGGGTTGCAGAGATTCGGTACTGGTGGC
GCGCCGACGAGTGAGGTGGGGATTGCGATGCTCAAGGAAGATTGGGCTGG
AGCGGTGAGGCTAATCATGACTCCTAGGTTGGGGGAGAACGAGGCTACGC
ACGACAGTAAGGTGTGCGGGAAGACGCTGTACTGTTTTGTATTGTAAGGT
AGCGAAACAGCATTGAAGTTGTGGATTCTAGAGTTTGTTGTATAAGAAAA
CAGCACGGTGATAGAAGTTGCTCGTCTGATATTGCGTGCAGTGGCCAGTG
TCATCGTAGTAAGGTCAACTTGGCGGTCAATGCAACATTGTGTCGGGCCA
GTCATACAAGTATTCCTATTGCATATCAGGCACGTGGCAATCGTCGCACT
TCGGGTGAATTCTGTGTTTTGGTAGATGGGGCCTGTGCAGGGTACTACCG
TGCTAGTTTGATCCATGTCTCGCTTTACAGTGTCGTCTAGAAGGGTATCT
CTCCGTAGAATTTTCTACGATGATACATTCGACCCGTCCTTTCAAGTGAG
TAACACAAGACTAATCCAACCATGGCATGTTAGCTGTTCTATAGAGTGCT
TAGTTGTTGTTTACCGTTGTATTCACACGTCCCATGTCAAACTGAATTTT
GGCCTTTGGTTTTGTTTCGCTGTCAAACTTGCTCGTACGTGCTTCATTGC
GCCACGCCAATAATTAGGTGCATTACCTAAAAAAGCCTACTGACGTGGAG
GGGACGTTGAGGAAACTTCCCTTCTTCATGAACGCAGAGAAGAACATGAT
GCAAGCCATGATGAGGGGAGGGCCTCACTCGCACATCCAAGCTCTCAGAG
CAGTGCCTAAGAATCTGCAGCTCATGTACCTGTGAGTGTATCTCTTCGTA
GCGCTATGCGCGTTGTTGTTCCACTTACAAACTTGGGCCTTGATCTGAAG
GAGGCGGAGGGTGGCCATTATACAAAGATTCACGGAGTCGAACGTATCGT
ACAGTTAGTTTTCCCCTCTTACGCTTAATGTCAGTTCAATCGCTACGACC
CGCGGTGCGGTCAGAGTATTTGATCTCATCGTGTTGATCGTTTGGTGGGT
CATGACATCATGGGTATCTTTTTAATTTATTACTGTATTTTCTTGTGCGA
GTGGCACGAAGTTGACGTCAAGGCACACTCTATTTACCGGTTAGCAGTTG
TTGCTCCGAGGTGGAGAAGTCCCTTACAAACAGATTGGCGTCGCTCTTGA
CCGGTTCAATGAGTGAATGCGCCTTGTGATTTAGTTTTGCAGTTTTCACA
ACTAATGTACTGTAATGAGTCCAGTAGAATTTTTAGGCGATGCCTCAATC
AACTTGTCTTCTTTTTTCACAGGTTTCTTCTGTCCGTGTGTGTTCCGATC
TCCCTCTGATGATTGCCATGTCCATCATGTTCTTTACTTGCAACAGATGT
CATCGAGCATAATGTTTTGTTGCTTTTCTCTAGTCAAGTTTTAGTGTCAG
CTCGATTAATTTGTACGATCTGTTCTTGAGCTTCCTCCAGGAAGTTAATT
GCATCTCAACCCCCAACATTTGGTGAAAAAAGGCGATGAAAGACAGTGTT
TACATTATATGGCGAGAGCATGCTGATATCTGATGTTAGTTCTTTTCGAT
CCTCATGCCCTTCCCCTAAAGGCACGCCTTCCAATCTCTGGTGTGGAACC
TGGCAGCGTCGGAGCGCGTGAAGCTGTATGGTCGTGACAAGGTGGTAGTG
GGTGACCTCGTGTTCCCCAAGCACGTCACCCAAGACATAGACATGGAATC
TACGGAAATCGAGCCCGATCTGCAGCTCTTAGATGGCGTAGATAGTCCTG
CCGCCGACGCGGACTCAGGAGGGGTGGCCCTTGAGGGAGAGGGTGATGGA
GAGGAGGGTGATGAAGAGGCGGAGGAAGAAGGAAGAGATGCTAAGCGATC
CAGGAAGTGTCGCGAGAGCCTGCCGGAGGTCCACGTTGTGACAGAGGAGG
ATGTGGAGAAGGAGACGTTTGACGTGACTGAGGTGGTGCTACCTATGCCT
GGGTAA

Coding sequence (CDS) from alignment at H-paniculata_contig5602:446..9601-

>mRNA_H-paniculata_contig5602.13123.1 ID=mRNA_H-paniculata_contig5602.13123.1|Name=mRNA_H-paniculata_contig5602.13123.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4464bp|location=Sequence derived from alignment at H-paniculata_contig5602:446..9601- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAACGAGTGCTACAGAGGCCACGGTAGGCATAACACAGTTTGTCGGCGA
GAGTAGCACGGGTTTTTCGGGGATCCTGAAGCAGCGCTACTCTGACTTCA
TCGTGAAAGAGGGAACGAGTGCTACAGAGGCCACGGTAGGCATAACACAG
TTTGTCGGCGAGAGTAGCACGGGTTTTTCGGGGATCCTGAAGCAGCGCTA
CTCTGACTTCATCGTGAAAGAGGTCGCAAGAGATGGCGAAGTGAGCACAG
CCATCGACTTCCCGGGCCTACTACGACCCTTCCATGAGACGCACCCCATG
GTGCATAACAACAAGAACGAAGACAAAAACAACAATAAGGACAACGATGA
CGGCAACAACAATGCCAATGACAAAAAGGACCAAAGCAACACCACCGACA
ACGACCCCGATCCCGACAAGAAGGAAAGTAATGTAGGCGACGCTGTGAAC
AAGGAGCAGGGCAATGGAGCAGCAGCTGAGAGTGAGAAGCAGCAAGAGCC
GGAACAGGAGAATTTTGAGACGGTGGTCAAGGCCGGCGTTTGCACTCTGT
TGCCCGTGCTAGGAGAGGAGGTCACGACGAAGGTCGCAAGAGATGGCGAA
GTGAGCACAGCCATCGACTTCCCGGGCCTACTACGACCCTTCCATGAGAC
GCACCCCATGGTGCATAACAACAAGAACGAAGACAAAAACAACAATAAGG
ACAACGATGACGGCAACAACAATGCCAATGACAAAAAGGACCAAAGCAAC
ACCACCGACAACGACCCCGATCCCGACAAGAAGGAAAGTAATGTAGGCGA
CGCTGTGAACAAGGAGCAGGGCAATGGAGCAGCAGCTGAGAGTGAGAAGC
AGCAAGAGCCGGAACAGGAGAATTTTGAGACGGTGGTCAAGGCCGGCGTT
TGCACTCTGTTGCCCGTGCTAGGAGAGGAGGTCACGACGAAGGTGGAGGC
ATTCATTTTGGAAGGGCTTAGTATGGAAGGGGTGGACAGGCGGAAGCTGA
CTCTTCCCTCCACTGACAAGTCTGCTCGTACCGAGGTGGAGGCATTCATT
TTGGAAGGGCTTAGTATGGAAGGGGTGGACAGGCGGAAGCTGACTCTTCC
CTCCACTGACAAGTCTGCTCGTACCGAGGTGTACAACCTCCTGAAGAAAT
CACTGAGCAAATTCATCCTGGCAGTGACCGTGGACGAACCATCTACAGAC
GACAACCCCCCCACCTCCGATACCCCGGTGGAGAGAGAAACCAAAGTGCA
GGATGATGATGATGGCAAGGACAAGACAGGCAAGGCCAAAGAAGGCGACA
ATAAAGACACACCAATGACTGCAGGTACTACGAACGAAGAAAGCAAACCC
TCCGGAAACGAGAGCAATCCAGCCAACGGAGCGGCAGCTGACATAGCAGA
GTCGACGGTTGAGGGTGGTGGTGGTAGTGACGTGACTGCAGCGGGGAACG
GAGCTAAGCCGGTGGCGAAGGCAGGAACTCTCAACCCTAATCGCCCGAAG
TGTGTGCAGATCAAGATGAAGCCGGACTGGAAGAAGCACGGAAACAAGCG
TAGGAGAGGGGATCTCGAGGGCAGGGGCCGTGGTGGCAGGGTGTGGCCGA
ACGACTTGCCGGAGTACTGTCGCTTCGTTTTGTACAAGGAGAACATGGAT
ACTGTGTACAACCTCCTGAAGAAATCACTGAGCAAATTCATCCTGGCAGT
GACCGTGGACGAACCATCTACAGACGACAACCCCCCCACCTCCGATACCC
CGGTGGAGAGAGAAACCAAAGTGCAGGATGATGATGATGGCAAGGACAAG
ACAGGCAAGGCCAAAGAAGGCGACAATAAAGACACACCAATGACTGCAGG
TACTACGAACGAAGAAAGCAAACCCTCCGGAAACGAGAGCAATCCAGCCA
ACGGAGCGGCAGCTGACATAGCAGAGTCGACGGTTGAGGGTGGTGGTGGT
AGTGACGTGACTGCAGCGGGGAACGGAGCTAAGCCGGTGGCGAAGGCAGG
AACTCTCAACCCTAATCGCCCGAAGTGTGTGCAGATCAAGATGAAGCCGG
ACTGGAAGAAGCACGGAAACAAGCGTAGGAGAGGGGATCTCGAGGGCAGG
GGCCGTGGTGGCAGGGTGTGGCCGAACGACTTGCCGGAGTACTGTCGCTT
CGTTTTGTACAAGGAGAACATGGATACTATGAGCGCGGTCAGTCGTTTGT
GCAAGTTCTTGAAAATACCGACAAAGACGCTGGGGTACGCAGGCACCAAG
GATAAGCGCGCGATCACGTCGCAGTGGTGCACGGCTAAGAGGAAGGCTCA
AGAAGAGGTCATGATGTTCAACCGCCCTCTCGCAGCTTTTCATATGAGCG
CGGTCAGTCGTTTGTGCAAGTTCTTGAAAATACCGACAAAGACGCTGGGG
TACGCAGGCACCAAGGATAAGCGCGCGATCACGTCGCAGTGGTGCACGGC
TAAGAGGAAGGCTCAAGAAGAGGTCATGATGTTCAACCGCCCTCTCGCAG
CTTTTCATGGTTCGATATCGCTCGTAGGAAAATTTTCGTACGTGTCGGAA
CCTCTGAAACTGGGCGATCTCAAAGGAAACCATTTCGAAATCGTGCTGAG
AAACCTGACCGTGCCCAAGCCAGCAACAGCAACAGCAGCAGGTTCGATAT
CGCTCGTAGGAAAATTTTCGTACGTGTCGGAACCTCTGAAACTGGGCGAT
CTCAAAGGAAACCATTTCGAAATCGTGCTGAGAAACCTGACCGTGCCCAA
GCCAGCAACAGCAACAGCAGCAAACGGTTCGGAGCCCCAAGACTATGCGG
GGAACATTCAGGGAACCGGTGCCGATGATGACAAGTCCGAAGAAGAGATT
GTGGAAGAGGGAAAAAGGCTGAAAGATATCATCGACTTGCGCTGCACGAT
GGTGAAGGAAGGCGGTTTTATCAATTATTTTGGGTTGCAGAGATTCGGTA
CTGGTGGCGCGCCGACGAGTGAGGTGGGGATTGCGATGCTCAAGGAAGAT
TGGGCTGGAGCGGTGAGGCTAATCATGACTCCTAGGTTGGGGGAGAACGA
GGCTACGCACGACAGTAAGAACGGTTCGGAGCCCCAAGACTATGCGGGGA
ACATTCAGGGAACCGGTGCCGATGATGACAAGTCCGAAGAAGAGATTGTG
GAAGAGGGAAAAAGGCTGAAAGATATCATCGACTTGCGCTGCACGATGGT
GAAGGAAGGCGGTTTTATCAATTATTTTGGGTTGCAGAGATTCGGTACTG
GTGGCGCGCCGACGAGTGAGGTGGGGATTGCGATGCTCAAGGAAGATTGG
GCTGGAGCGGTGAGGCTAATCATGACTCCTAGGTTGGGGGAGAACGAGGC
TACGCACGACAGTAAGGTGCATTACCTAAAAAAGCCTACTGACGTGGAGG
GGACGTTGAGGAAACTTCCCTTCTTCATGAACGCAGAGAAGAACATGATG
CAAGCCATGATGAGGGGAGGGCCTCACTCGCACATCCAAGCTCTCAGAGC
AGTGCCTAAGAATCTGCAGCTCATGTACCTGTGCATTACCTAAAAAAGCC
TACTGACGTGGAGGGGACGTTGAGGAAACTTCCCTTCTTCATGAACGCAG
AGAAGAACATGATGCAAGCCATGATGAGGGGAGGGCCTCACTCGCACATC
CAAGCTCTCAGAGCAGTGCCTAAGAATCTGCAGCTCATGTACCTGCACGC
CTTCCAATCTCTGGTGTGGAACCTGGCAGCGTCGGAGCGCGTGAAGCTGT
ATGGTCGTGACAAGGTGGTAGTGGGTGACCTCGTGTTCCCCAAGCACGTC
ACCCAAGACATAGACATGGAATCTACGGAAATCGAGCCCGATCTGCAGCT
CTTAGATGGCGTAGATAGTCCTGCCGCCGACGCGGACTCAGGAGGGGTGG
CCCTTGAGGGAGAGGGTGATGGAGAGGAGGGTGATGAAGAGGCGGAGGAA
GAAGGAAGAGATGCTAAGCGATCCAGGAAGTGTCGCGAGAGCCTGCCGGA
GGTCCACGTTGTGACAGAGGAGGATGTGGAGAAGGAGACGTTTGACGTGA
CTGAGGTGGTGCTACCTATGCCTGGGTAAGCACGCCTTCCAATCTCTGGT
GTGGAACCTGGCAGCGTCGGAGCGCGTGAAGCTGTATGGTCGTGACAAGG
TGGTAGTGGGTGACCTCGTGTTCCCCAAGCACGTCACCCAAGACATAGAC
ATGGAATCTACGGAAATCGAGCCCGATCTGCAGCTCTTAGATGGCGTAGA
TAGTCCTGCCGCCGACGCGGACTCAGGAGGGGTGGCCCTTGAGGGAGAGG
GTGATGGAGAGGAGGGTGATGAAGAGGCGGAGGAAGAAGGAAGAGATGCT
AAGCGATCCAGGAAGTGTCGCGAGAGCCTGCCGGAGGTCCACGTTGTGAC
AGAGGAGGATGTGGAGAAGGAGACGTTTGACGTGACTGAGGTGGTGCTAC
CTATGCCTGGGTAA