mRNA_H-paniculata_contig5554.13055.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 1.100e-19 Identity = 42/75 (56.00%), Postives = 51/75 (68.00%), Query Frame = 1
Query: 73 HGARHFKRWTNEVVTEFFGDMMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIAGS 297
H A W E+ E+F D MG V P DVFL TVDQG NV NA +LG+PV+ CN +R+NTAV+WALGIAG+
Sbjct: 329 HTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGN 403
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 5.100e-19 Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 73 HGARHFKRWTNEVVTEFFGDMMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIAGSTST 306
H A K W + E+F D+MG +V DVFL TVDQG NV NA +LG+PV+ CN +R+N+AV+WALGIAGS +T
Sbjct: 140 HTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATT 217
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 6.600e-19 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 73 HGARHFKRWTNEVVTEFFGDMMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIAGSTST 306
H A K W + E+F D++G +V P DVFL TVDQG N+ NA +LG+PV+ CN +R+N+AV+WALGIAG T
Sbjct: 137 HTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCART 214
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 2.270e-18 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 1
Query: 103 NEVVTEFFGDMMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIAGSTSTSTDIRPNG 330
+++ E+FG MG +V P+DVFL TVDQG NV NA +LG+ V+ CN +R+N+AV+WALGIAGS +T + + G
Sbjct: 5 SQLTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGG 80
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 3.290e-18 Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 73 HGARHFKRWTNEVVTEFFGDMMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIAGSTST 306
H A K W + E+ D+MG +V DVFL TVDQG NV NA +LG+PV+ CN +R+N+AV+WALGIAGS +T
Sbjct: 140 HTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTT 217
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 4.500e-18 Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 73 HGARHFKRWTNEVVTEFFGDMMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIAG 294
H A + W ++ E+F MG +V P+DVFL TVDQG N+ NA +LG+ V+ CN +RLNTAV+WALGIAG
Sbjct: 136 HTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG 209
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 4.600e-18 Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 73 HGARHFKRWTNEVVTEFFGDMMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIAG 294
H A + W ++ E+F MG +V P+DVFL TVDQG N+ NA +LG+ V+ CN +RLNTAV+WALGIAG
Sbjct: 331 HTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG 404
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.450e-17 Identity = 41/67 (61.19%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 106 EVVTEFFGDMMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIAGSTST 306
++ TEFF DMMG V P DVFL TVDQG NV NA +L + VL CNA+RLN+ MWALGI GS T
Sbjct: 2 QLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRT 68
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 2.970e-17 Identity = 41/66 (62.12%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 109 VVTEFFGDMMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIAGSTST 306
+ TEFF DMMG V P DVFL TVDQG NV NA +L + VL CNA+RLN+ MWALGI GS T
Sbjct: 331 LTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRT 396
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 2.900e-10 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 1
Query: 136 MGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALGIA 291
MG +V P++ FL TVDQG N+ NA +L + V+ CN +R+NTAV+WALGIA
Sbjct: 1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIA 52 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5554.13055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5554.13055.1 >prot_H-paniculata_contig5554.13055.1 ID=prot_H-paniculata_contig5554.13055.1|Name=mRNA_H-paniculata_contig5554.13055.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp MMGTTVAPADVFLDLTVDQGANVFNAIDSLGIPVLTCNAYRLNTAVMWALback to top mRNA from alignment at H-paniculata_contig5554:11636..12222- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5554.13055.1 ID=mRNA_H-paniculata_contig5554.13055.1|Name=mRNA_H-paniculata_contig5554.13055.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=587bp|location=Sequence derived from alignment at H-paniculata_contig5554:11636..12222- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5554:11636..12222- >mRNA_H-paniculata_contig5554.13055.1 ID=mRNA_H-paniculata_contig5554.13055.1|Name=mRNA_H-paniculata_contig5554.13055.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at H-paniculata_contig5554:11636..12222- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |