mRNA_H-paniculata_contig55470.13040.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: D7G8Z6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z6_ECTSI) HSP 1 Score: 103 bits (256), Expect = 3.570e-24 Identity = 44/59 (74.58%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQV 177
WPMPPVR LWR+SPT +L HL+GHEGPGSL+A LQD+GLA ++SSG+RTAH+DF LFQV
Sbjct: 89 WPMPPVRDLWRNSPTMVLSHLLGHEGPGSLYAALQDQGLANSLSSGMRTAHEDFSLFQV 147
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: A0A6H5KRX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX7_9PHAE) HSP 1 Score: 103 bits (256), Expect = 3.880e-24 Identity = 44/59 (74.58%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQV 177
WPMPPVR LWR+SPT +L HL+GHEGPGSL+A LQD+GLA ++SSG+RTAH+DF LFQV
Sbjct: 380 WPMPPVRDLWRNSPTMVLSHLLGHEGPGSLYAALQDQGLANSLSSGMRTAHEDFSLFQV 438
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: A0A836CLR7_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR7_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 5.010e-21 Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQV 177
WP+PP RRLWR SPTR+L H+ G E PGSLF+ LQDRGLA +V++G+RT++DDF LFQV
Sbjct: 571 WPLPPQRRLWRESPTRLLSHIWGSESPGSLFSVLQDRGLANSVAAGVRTSYDDFSLFQV 629
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: K8YXD5_NANGC (Insulysin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXD5_NANGC) HSP 1 Score: 78.6 bits (192), Expect = 1.770e-15 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQV 177
WP+PP R +R+ PTR+L HL+GHEG GS+F+ L G A+ V +GL T+ DDFCLF+V
Sbjct: 181 WPLPPSRPAYRAPPTRLLSHLLGHEGEGSIFSVLHRAGWASGVHAGLGTSQDDFCLFEV 239
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: A0A7S2S1E0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1E0_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.290e-15 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQV 177
W +PP + LW + PT +L HL+GHEGPGS+FA LQDRG TA+S+G R +D FQV
Sbjct: 13 WEIPPTKDLWPAPPTALLSHLLGHEGPGSIFAALQDRGWVTALSAGERIGQEDVAAFQV 71
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: A0A7S3P520_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P520_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.480e-12 Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQVS 180
W +P + + SSP +LGHL+GHEGP S+FA LQ+ GL TA+S+G R + DF +FQVS
Sbjct: 309 WTLPSAQHIPDSSPLSLLGHLLGHEGPSSIFAHLQNEGLLTALSAGPRMSAPDFSIFQVS 368
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: A0A7S0NDL5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NDL5_9EUKA) HSP 1 Score: 68.9 bits (167), Expect = 3.810e-12 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQV 177
W +PP+R L+RS P RIL HL+GHEG GSL + L+ +G A+S+G ++ DF LF+V
Sbjct: 166 WALPPLRPLYRSKPHRILSHLLGHEGEGSLLSLLKSKGWCDALSAGETNSNSDFALFEV 224
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: A0A1Z5JM00_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JM00_FISSO) HSP 1 Score: 67.0 bits (162), Expect = 2.070e-11 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQV 177
+P+P V L SP +L HL+GHEGP S FA LQD GL +++S+G RT+ DF LFQV
Sbjct: 318 FPLPSVHILSDRSPVSVLSHLLGHEGPNSPFAVLQDAGLLSSLSAGQRTSGPDFTLFQV 376
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: A0A1Z5KBP4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBP4_FISSO) HSP 1 Score: 67.0 bits (162), Expect = 2.070e-11 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQV 177
+P+P V L SP +L HL+GHEGP S FA LQD GL +++S+G RT+ DF LFQV
Sbjct: 318 FPLPSVHLLSDRSPVSVLSHLLGHEGPNSPFAVLQDAGLLSSLSAGPRTSGPDFTLFQV 376
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Match: A0A1E7EVI0_9STRA (Peptidase_M16-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVI0_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.070e-11 Identity = 30/59 (50.85%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 1 WPMPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDDFCLFQV 177
+P+P R+ +P+ +L HL+GHEGPGS FATLQ++GL +++S+G RT+ DF +FQV
Sbjct: 333 FPIPSDRKTPDRAPSSMLSHLLGHEGPGSAFATLQNKGLLSSLSAGPRTSGPDFTIFQV 391 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55470.13040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig55470.13040.1 >prot_H-paniculata_contig55470.13040.1 ID=prot_H-paniculata_contig55470.13040.1|Name=mRNA_H-paniculata_contig55470.13040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp MPPVRRLWRSSPTRILGHLMGHEGPGSLFATLQDRGLATAVSSGLRTAHDback to top mRNA from alignment at H-paniculata_contig55470:780..974+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig55470.13040.1 ID=mRNA_H-paniculata_contig55470.13040.1|Name=mRNA_H-paniculata_contig55470.13040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=195bp|location=Sequence derived from alignment at H-paniculata_contig55470:780..974+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig55470:780..974+ >mRNA_H-paniculata_contig55470.13040.1 ID=mRNA_H-paniculata_contig55470.13040.1|Name=mRNA_H-paniculata_contig55470.13040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=378bp|location=Sequence derived from alignment at H-paniculata_contig55470:780..974+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |