mRNA_H-paniculata_contig5547.13038.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5547.13038.1
Unique NamemRNA_H-paniculata_contig5547.13038.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A6H5KZS8_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS8_9PHAE)

HSP 1 Score: 460 bits (1184), Expect = 3.380e-151
Identity = 221/263 (84.03%), Postives = 234/263 (88.97%), Query Frame = 1
Query:    1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSE-------------VGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHSK 750
            VM Y++DLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLL S YFGDETANLLP CSDNMSDSGNFDSVLEL+VKAGDREIPEVMM+MVPEAWQDN FLSD K+AFYEYNSC MEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYY+TDDDRVLLSSE             VGVLPNL DESVV KARLEPGKMFLVDLD G+IVPDD VKE YA RLPY +WL+++LIN+  WTEHS+
Sbjct:  271 VMPYYLDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLHSEYFGDETANLLPACSDNMSDSGNFDSVLELSVKAGDREIPEVMMSMVPEAWQDNAFLSDAKAAFYEYNSCSMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYVTDDDRVLLSSEGRVLGSLREGGLWVGVLPNLPDESVVKKARLEPGKMFLVDLDVGEIVPDDIVKEKYANRLPYAEWLEKNLINIKGWTEHSQ 533          
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A835YLR4_9STRA (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR4_9STRA)

HSP 1 Score: 430 bits (1106), Expect = 3.720e-137
Identity = 200/245 (81.63%), Postives = 218/245 (88.98%), Query Frame = 1
Query:    1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDW 735
            VM YF+DLQQ DFTSH+ALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWM+ARGG++ S+YFGD+T  LLP CSDNMSDSGNFDSVLE  VK G REIPEVMM MVPEAWQDN FLS TK+AFYEYNSCIMEPWDGPAMMAFTDGR+IGATLDRNGLRPSRYY+TDDDRVLLSSEVGVLP   D  V  KARLEPGKMFLVDL++G I+PDD VKE YA RLPY  WL+++++NL DW
Sbjct:  250 VMPYFLDLQQDDFTSHIALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMYARGGMMHSSYFGDDTHQLLPACSDNMSDSGNFDSVLETMVKGGAREIPEVMMAMVPEAWQDNQFLSPTKAAFYEYNSCIMEPWDGPAMMAFTDGRFIGATLDRNGLRPSRYYVTDDDRVLLSSEVGVLPGEDDAGVKIKARLEPGKMFLVDLEKGAIIPDDVVKEDYASRLPYADWLERNMLNLKDW 494          
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A7S2R1J9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1J9_9STRA)

HSP 1 Score: 384 bits (985), Expect = 2.490e-132
Identity = 176/246 (71.54%), Postives = 203/246 (82.52%), Query Frame = 1
Query:    1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWT 738
            V QYF+DL+ P F SHLALVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG++ S YFGD T+ LLP   D+MSDSGNFDSVLEL  KA DR +PE +M M+PEAWQDN  LSD+K +FYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSRYY+T DD V+LSSE+GV+P+L D  V  K RLEPGKMFLVD +  +IVPDD +KE  A + PY  W+ +SLI+L  WT
Sbjct:   25 VSQYFLDLKDPTFLSHLALVHSRFSTNTFPSWERAQPMRMMCHNGEINTLRGNKNWMYSRGGMMASDYFGDATSQLLPATGDHMSDSGNFDSVLELMTKASDRSLPEAVMMMIPEAWQDNDNLSDSKKSFYEYNSCVMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRYYVTKDDHVILSSEIGVIPDLPDSEVKIKHRLEPGKMFLVDFETERIVPDDEIKEQMAAKYPYKDWIKKSLIDLEQWT 270          
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A7S2YAL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YAL2_9STRA)

HSP 1 Score: 375 bits (964), Expect = 6.730e-126
Identity = 169/245 (68.98%), Postives = 205/245 (83.67%), Query Frame = 1
Query:    1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDW 735
            V QY+ DL+ PDF SHLALVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG+++S ++GD+T +LLP  SDNMSDSGNFDSVLEL  KA +R +PE +M M+PEAWQDN +LSDTK +FYEYNS +MEPWDGPAM+AFTD RYIGATLDRNGLRPSRYY+T+DD V+L+SE+GV P++ D  V  K RLEPGKMFLVD +  +IVPDD +KE  A + PYG+W++  L++L  +
Sbjct:   30 VSQYYCDLKNPDFVSHLALVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMYSRGGIMESPFYGDDTTHLLPATSDNMSDSGNFDSVLELMTKASNRSLPEAVMMMIPEAWQDNLYLSDTKKSFYEYNSAVMEPWDGPAMVAFTDSRYIGATLDRNGLRPSRYYVTNDDVVILASEIGVCPDVPDSEVKIKHRLEPGKMFLVDFETQRIVPDDEIKEQVAAQHPYGEWVENGLVDLEQY 274          
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: D8LCE0_ECTSI (Glutamate synthase (NADH/NADPH-dependent), C-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE0_ECTSI)

HSP 1 Score: 394 bits (1012), Expect = 2.620e-125
Identity = 185/211 (87.68%), Postives = 197/211 (93.36%), Query Frame = 1
Query:  118 MMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHSK 750
            MMCHNGEINTLRGNKNWMHARGGLL S YFGDETANLLP CSDNMSDSGNFDSVLEL+VKAGDREIPEVMM+MVPEAWQDNPFLSD K+AFYEYNSC MEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYY+TDDDRVLLSSEVGVLP+L DESVV KARLEPGKMFLVDLD G+IVPDD VKE YA RLPY +WL+++LIN+  WTEHS+
Sbjct:    1 MMCHNGEINTLRGNKNWMHARGGLLHSEYFGDETANLLPACSDNMSDSGNFDSVLELSVKAGDREIPEVMMSMVPEAWQDNPFLSDAKAAFYEYNSCSMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYVTDDDRVLLSSEVGVLPDLPDESVVKKARLEPGKMFLVDLDVGEIVPDDFVKEKYANRLPYAEWLEKNLINIKGWTEHSQ 211          
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A7S1CWJ6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWJ6_CYCTE)

HSP 1 Score: 372 bits (955), Expect = 4.280e-125
Identity = 171/247 (69.23%), Postives = 198/247 (80.16%), Query Frame = 1
Query:    1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTE 741
            V  YF+DL+ P F SH+ LVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG++ S  +GDET  LLP  SD+MSDSGNFDSVLEL  K  +R +PE +M M+PEAWQDN  LSDTK AFYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSRYY+T DD V+LSSE+GV P+L D  V  K RLEPGKMFLVD D  +IVPDD +KE  A   PY +W++  +I+L  W +
Sbjct:  157 VAAYFLDLKDPTFISHMGLVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMYSRGGIMASDIYGDETMQLLPATSDHMSDSGNFDSVLELLTKGSNRSLPESVMMMIPEAWQDNDNLSDTKKAFYEYNSCVMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRYYVTKDDHVMLSSEIGVCPDLPDAEVKIKHRLEPGKMFLVDFDTQRIVPDDEIKEEVASMRPYAEWVENGIIDLETWVK 403          
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: B8CBI7_THAPS (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBI7_THAPS)

HSP 1 Score: 384 bits (985), Expect = 3.560e-120
Identity = 175/249 (70.28%), Postives = 205/249 (82.33%), Query Frame = 1
Query:    1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHS 747
            V QY++D++ P F SHLALVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM +RGGL+ S YFG++T  LLP  SDNMSDSGNFDSVLEL  K  +R +PE +M M+PEAWQDNP LS++K AFYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSRYY+T DD V+LSSE+GV+P LKD  V  K RLEPGKMFLVD +  +IVPDD +KE  +   PYG W+ +S+I+L  WT+ +
Sbjct:  203 VSQYYLDIKDPQFISHLALVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMFSRGGLMASDYFGNDTHQLLPATSDNMSDSGNFDSVLELMAKGSERSLPEAVMMMIPEAWQDNPNLSESKKAFYEYNSCLMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRYYVTKDDHVVLSSEIGVIPELKDSDVKIKHRLEPGKMFLVDFETQRIVPDDEIKEQISSLHPYGDWVQESMIDLEKWTQEA 451          
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A482SR36_9ARCH (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SR36_9ARCH)

HSP 1 Score: 359 bits (922), Expect = 5.120e-120
Identity = 174/252 (69.05%), Postives = 198/252 (78.57%), Query Frame = 1
Query:    1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETAN--LLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHSK 750
            V  Y+ DLQ   F+SH+ALVHSRFSTNTFPSW RAQPNRMMCHNGEINTLRGNKNWM++R GL+ S  FG++     LLP  SD+MSDSGNFDSVLEL  K   R +PE +M M+PEAWQDN  LS +KSAFYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSR+Y+T DD VLLSSE+GVLP+L + SV  K+RLEPGKMFLVD DQ KIV D  +KE  A    Y KWL  +L  L DW + SK
Sbjct:   99 VFDYYHDLQSEHFSSHMALVHSRFSTNTFPSWERAQPNRMMCHNGEINTLRGNKNWMYSRSGLMTSPLFGEDVGGEKLLPT-SDDMSDSGNFDSVLELLAKGSPRILPECIMMMIPEAWQDNIHLSQSKSAFYEYNSCVMEPWDGPAMIAFTDGRYIGATLDRNGLRPSRFYVTKDDVVLLSSEIGVLPDLPETSVKLKSRLEPGKMFLVDFDQEKIVSDHIIKEEVAKTRDYSKWLQDNLFTLDDWVQASK 349          
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A7S3VBN2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBN2_9STRA)

HSP 1 Score: 382 bits (980), Expect = 3.850e-119
Identity = 175/249 (70.28%), Postives = 206/249 (82.73%), Query Frame = 1
Query:    1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHS 747
            V QY++DL+ P F SHL+LVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG++ S Y+GDET+ LLP   D+MSDSGNFDSVLEL  KA DR +PE +M M+PEAWQDN  LS++K AFYEYNS IMEPWDGPAM+AFTDGRYIGATLDRNGLRPSRYY+T+DD V+LSSE+GV+P LKD  V  K RLEPGKMFLVD +  +IVPDD +KE  A + PY +W+D ++I+L  WT  S
Sbjct:  294 VSQYYLDLKDPSFVSHLSLVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMYSRGGIMGSDYYGDETSQLLPATGDHMSDSGNFDSVLELMAKASDRSLPECVMMMIPEAWQDNHNLSESKKAFYEYNSAIMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRYYVTNDDHVILSSEIGVIPELKDTDVKIKHRLEPGKMFLVDFETERIVPDDEIKEQIASQAPYKEWVDDNMIDLEKWTSVS 542          
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A6V2D782_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2D782_9STRA)

HSP 1 Score: 375 bits (964), Expect = 5.810e-119
Identity = 172/245 (70.20%), Postives = 201/245 (82.04%), Query Frame = 1
Query:    1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDW 735
            V+QY++DLQ P F SH++LVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG++ S YFG+ T  LLP  SDNMSDSGN DSVLEL  KA DR +PE +M M+PEAWQDN  L+D+K AFYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSR+Y+T DD VLLSSE+GV+P+L D  V  K RLEPGKMFLVD +  +IVPDD +KE  A + PY +W+   LI+L  W
Sbjct:  280 VIQYYLDLQDPAFISHMSLVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMYSRGGIMASDYFGNSTQQLLPATSDNMSDSGNLDSVLELLSKASDRSLPECVMMMIPEAWQDNHNLTDSKKAFYEYNSCVMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRFYVTKDDHVLLSSEIGVIPDLPDSEVKIKHRLEPGKMFLVDFETERIVPDDEIKEVIAAQKPYAEWVQNGLIDLEKW 524          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZS8_9PHAE3.380e-15184.03Glutamine amidotransferase type-2 domain-containin... [more]
A0A835YLR4_9STRA3.720e-13781.63Glutamine amidotransferase type-2 domain-containin... [more]
A0A7S2R1J9_9STRA2.490e-13271.54Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2YAL2_9STRA6.730e-12668.98Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
D8LCE0_ECTSI2.620e-12587.68Glutamate synthase (NADH/NADPH-dependent), C-termi... [more]
A0A7S1CWJ6_CYCTE4.280e-12569.23Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
B8CBI7_THAPS3.560e-12070.28Glutamine amidotransferase type-2 domain-containin... [more]
A0A482SR36_9ARCH5.120e-12069.05Glutamine amidotransferase type-2 domain-containin... [more]
A0A7S3VBN2_9STRA3.850e-11970.28Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A6V2D782_9STRA5.810e-11970.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5547contigH-paniculata_contig5547:205..1995 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.1
Seed ortholog evalue1.9e-106
Seed eggNOG ortholog2880.D8LCE0
Preferred nameGLT1
KEGG rclassRC00006,RC00010,RC02799
KEGG koko:K00264,ko:K17792
KEGG TC3.A.8.1
KEGG ReactionR00093,R00114,R00248
KEGG Pathwayko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0015930,GO:0016040,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0017144,GO:0019676,GO:0019740,GO:0019752,GO:0030447,GO:0032502,GO:0036267,GO:0040007,GO:0042133,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045181,GO:0046394,GO:0046686,GO:0048589,GO:0050896,GO:0055114,GO:0060359,GO:0065007,GO:0065008,GO:0070783,GO:0071704,GO:0097054,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901698
EggNOG free text desc.L-glutamate biosynthetic process
EggNOG OGsCOG0069@1,KOG0399@2759
Ec32 ortholog descriptionGlutamate synthase (NADH/NADPH-dependent), N-terminal part
Ec32 orthologEc-26_004630.1
EC1.4.1.13,1.4.1.14
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029
Exons4
Model size750
Cds size747
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5547.13038.1prot_H-paniculata_contig5547.13038.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5547 205..1992 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930582.7378676-CDS-H-paniculata_contig5547:204..4081622930582.7378676-CDS-H-paniculata_contig5547:204..408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5547 205..408 -
1691481358.4763405-CDS-H-paniculata_contig5547:204..4081691481358.4763405-CDS-H-paniculata_contig5547:204..408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5547 205..408 -
1622930582.7536812-CDS-H-paniculata_contig5547:775..10001622930582.7536812-CDS-H-paniculata_contig5547:775..1000Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5547 776..1000 -
1691481358.4891233-CDS-H-paniculata_contig5547:775..10001691481358.4891233-CDS-H-paniculata_contig5547:775..1000Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5547 776..1000 -
1622930582.7709308-CDS-H-paniculata_contig5547:1341..15671622930582.7709308-CDS-H-paniculata_contig5547:1341..1567Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5547 1342..1567 -
1691481358.4986136-CDS-H-paniculata_contig5547:1341..15671691481358.4986136-CDS-H-paniculata_contig5547:1341..1567Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5547 1342..1567 -
1622930582.7934585-CDS-H-paniculata_contig5547:1900..19921622930582.7934585-CDS-H-paniculata_contig5547:1900..1992Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5547 1901..1992 -
1691481358.5077002-CDS-H-paniculata_contig5547:1900..19921691481358.5077002-CDS-H-paniculata_contig5547:1900..1992Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5547 1901..1992 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930582.8142514-UTR-H-paniculata_contig5547:1992..19951622930582.8142514-UTR-H-paniculata_contig5547:1992..1995Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5547 1993..1995 -
1691481358.5173867-UTR-H-paniculata_contig5547:1992..19951691481358.5173867-UTR-H-paniculata_contig5547:1992..1995Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5547 1993..1995 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5547.13038.1

>prot_H-paniculata_contig5547.13038.1 ID=prot_H-paniculata_contig5547.13038.1|Name=mRNA_H-paniculata_contig5547.13038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp
MQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLR
GNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAG
DREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTD
GRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLE
PGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHSK
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mRNA from alignment at H-paniculata_contig5547:205..1995-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5547.13038.1 ID=mRNA_H-paniculata_contig5547.13038.1|Name=mRNA_H-paniculata_contig5547.13038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1791bp|location=Sequence derived from alignment at H-paniculata_contig5547:205..1995- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGATGCAGTATTTCGTGGATCTTCAACAGCCCGACTTCACGTCTCACTT GGCGTTGGTGCATTCCCGGTTCTCCACCAACACATTCCCGTCCTGGTGAG CTAGCTGGCTGGTAGCTGATGGCGGAGCACTTTTTTGTTACGTTCGCAAA ACACGCCTCCCTATGGTATTAAAATTCTACGCAGCAACGTTTGCGTAATA TGCAGCATCTAATTTGAACTTCCAATCTATGGTGGCAATATTCGAAAGCA CTCAGGGCAAGAGGGGGATCCTATTTCGGGTGGAGTGATCGACTAAAAAT GTAGGTTTTTACCATTCCTCCCCCCTCCTCCCCCCTCCCGCTCCCAAAAA CAATCAACCCGCAAATCATTACATATGCCTCTGAAATCACGAACGAAAAC AATTTTTTGTGCTGGGGGCATCGAGCAGGAACCGCGCCCAACCCAACCGT ATGATGTGCCACAACGGAGAGATCAACACGTTGCGCGGTAACAAGAACTG GATGCATGCCCGCGGTGGTTTGCTGGACTCGGCTTACTTCGGCGACGAAA CCGCCAATCTGTTGCCGGTTTGCTCTGACAATATGTCGGACTCGGGAAAC TTCGACTCGGTGCTGGAGCTGACAGTGAAGGCCGGCGACCGCGAGATCCC TGAGGTGGGTTTAGTGTGTCACACTCCAAAGAGTTACGATGCTTAAGCCC TATATCGCACTGTCGTTGGGTGGATGGCTTGATAAGGTGCCGTGCTGCTC AAGGGCGAGGTCGCTAACCTGACCAGCTTCCGTAATTAGTTTTGTTGTTC AAGTGATTTTATTCGCGTATTGATGAGGTATTCTAATTTTCGGTCAAGTT ACCAAAAAAAACCAACGAAAGCATGTATTTTACTCCTCTCCTGAAATATT CACACCCGTGCCCCTCTGCGGTCGCGTCCTGCCCCTCAAAAAATTGTTTT TTCTCGGATATCCTCGACTTGACTATTTTAACGCGCCTATTGCAGGTTAT GATGACCATGGTCCCCGAGGCTTGGCAAGACAATCCCTTCCTATCCGACA CGAAGTCGGCCTTCTACGAGTACAACTCGTGCATCATGGAGCCATGGGAC GGCCCCGCTATGATGGCCTTCACGGACGGCCGATACATCGGCGCAACGCT GGACCGTAACGGCCTGCGGCCTTCGCGTTACTATATCACCGACGATGACC GTGTGCTTCTATCTTCCGAGGTGAGTCAAATCATTGAATTGATAACAAAG AGATTACTGGAACACAACAGTTGATGTGCGTGGAAATATAATATCAAGAC GTACCAAATCGTGTCAATAGGTTCATTTAACTTGATTTTCGTCCTCTTCA GAGTAGGGTTAAAAGTTTTTTGTGGATGCAGAGTTGGTTGATGGGGACAA AAAAAATCTAAAACTCTTTTTATTTTTACCAAGCTGCTTCCAAGGCGGTA GGGGGCGGAGGGGGGGTGGGGGGGGGGGGCAGGGGGAGGAATCTTGCCGC AGAAATATGTTTCTTTTATTGGTAATATTTTGTTCCCTTCCTTTGTTCCT GTCTCCCTCATGTGGGGGTTCTGTGGTGGTGGTGCAGGTCGGTGTGCTGC CTAACCTAAAGGACGAGAGCGTGGTGACCAAGGCGCGACTGGAGCCCGGT AAGATGTTTCTCGTGGATCTGGACCAGGGAAAGATTGTGCCCGATGACAC GGTGAAAGAGACGTACGCGGGACGCCTGCCGTACGGCAAGTGGCTCGACC AAAGCCTCATCAACCTTTCCGATTGGACCGAGCACAGCAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig5547:205..1995-

>mRNA_H-paniculata_contig5547.13038.1 ID=mRNA_H-paniculata_contig5547.13038.1|Name=mRNA_H-paniculata_contig5547.13038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at H-paniculata_contig5547:205..1995- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGTATTTCGTGGATCTTCAACAGCCCGACTTCACGTCTCACTTGGC
GTTGGTGCATTCCCGGTTCTCCACCAACACATTCCCGTCCTGATGCAGTA
TTTCGTGGATCTTCAACAGCCCGACTTCACGTCTCACTTGGCGTTGGTGC
ATTCCCGGTTCTCCACCAACACATTCCCGTCCTGGAACCGCGCCCAACCC
AACCGTATGATGTGCCACAACGGAGAGATCAACACGTTGCGCGGTAACAA
GAACTGGATGCATGCCCGCGGTGGTTTGCTGGACTCGGCTTACTTCGGCG
ACGAAACCGCCAATCTGTTGCCGGTTTGCTCTGACAATATGTCGGACTCG
GGAAACTTCGACTCGGTGCTGGAGCTGACAGTGAAGGCCGGCGACCGCGA
GATCCCTGAGGAACCGCGCCCAACCCAACCGTATGATGTGCCACAACGGA
GAGATCAACACGTTGCGCGGTAACAAGAACTGGATGCATGCCCGCGGTGG
TTTGCTGGACTCGGCTTACTTCGGCGACGAAACCGCCAATCTGTTGCCGG
TTTGCTCTGACAATATGTCGGACTCGGGAAACTTCGACTCGGTGCTGGAG
CTGACAGTGAAGGCCGGCGACCGCGAGATCCCTGAGGTTATGATGACCAT
GGTCCCCGAGGCTTGGCAAGACAATCCCTTCCTATCCGACACGAAGTCGG
CCTTCTACGAGTACAACTCGTGCATCATGGAGCCATGGGACGGCCCCGCT
ATGATGGCCTTCACGGACGGCCGATACATCGGCGCAACGCTGGACCGTAA
CGGCCTGCGGCCTTCGCGTTACTATATCACCGACGATGACCGTGTGCTTC
TATCTTCCGAGGTTATGATGACCATGGTCCCCGAGGCTTGGCAAGACAAT
CCCTTCCTATCCGACACGAAGTCGGCCTTCTACGAGTACAACTCGTGCAT
CATGGAGCCATGGGACGGCCCCGCTATGATGGCCTTCACGGACGGCCGAT
ACATCGGCGCAACGCTGGACCGTAACGGCCTGCGGCCTTCGCGTTACTAT
ATCACCGACGATGACCGTGTGCTTCTATCTTCCGAGGTCGGTGTGCTGCC
TAACCTAAAGGACGAGAGCGTGGTGACCAAGGCGCGACTGGAGCCCGGTA
AGATGTTTCTCGTGGATCTGGACCAGGGAAAGATTGTGCCCGATGACACG
GTGAAAGAGACGTACGCGGGACGCCTGCCGTACGGCAAGTGGCTCGACCA
AAGCCTCATCAACCTTTCCGATTGGACCGAGCACAGCAAGGTCGGTGTGC
TGCCTAACCTAAAGGACGAGAGCGTGGTGACCAAGGCGCGACTGGAGCCC
GGTAAGATGTTTCTCGTGGATCTGGACCAGGGAAAGATTGTGCCCGATGA
CACGGTGAAAGAGACGTACGCGGGACGCCTGCCGTACGGCAAGTGGCTCG
ACCAAAGCCTCATCAACCTTTCCGATTGGACCGAGCACAGCAAG
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