mRNA_H-paniculata_contig5547.13038.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A6H5KZS8_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS8_9PHAE) HSP 1 Score: 460 bits (1184), Expect = 3.380e-151 Identity = 221/263 (84.03%), Postives = 234/263 (88.97%), Query Frame = 1
Query: 1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSE-------------VGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHSK 750
VM Y++DLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLL S YFGDETANLLP CSDNMSDSGNFDSVLEL+VKAGDREIPEVMM+MVPEAWQDN FLSD K+AFYEYNSC MEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYY+TDDDRVLLSSE VGVLPNL DESVV KARLEPGKMFLVDLD G+IVPDD VKE YA RLPY +WL+++LIN+ WTEHS+
Sbjct: 271 VMPYYLDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLHSEYFGDETANLLPACSDNMSDSGNFDSVLELSVKAGDREIPEVMMSMVPEAWQDNAFLSDAKAAFYEYNSCSMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYVTDDDRVLLSSEGRVLGSLREGGLWVGVLPNLPDESVVKKARLEPGKMFLVDLDVGEIVPDDIVKEKYANRLPYAEWLEKNLINIKGWTEHSQ 533
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A835YLR4_9STRA (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR4_9STRA) HSP 1 Score: 430 bits (1106), Expect = 3.720e-137 Identity = 200/245 (81.63%), Postives = 218/245 (88.98%), Query Frame = 1
Query: 1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDW 735
VM YF+DLQQ DFTSH+ALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWM+ARGG++ S+YFGD+T LLP CSDNMSDSGNFDSVLE VK G REIPEVMM MVPEAWQDN FLS TK+AFYEYNSCIMEPWDGPAMMAFTDGR+IGATLDRNGLRPSRYY+TDDDRVLLSSEVGVLP D V KARLEPGKMFLVDL++G I+PDD VKE YA RLPY WL+++++NL DW
Sbjct: 250 VMPYFLDLQQDDFTSHIALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMYARGGMMHSSYFGDDTHQLLPACSDNMSDSGNFDSVLETMVKGGAREIPEVMMAMVPEAWQDNQFLSPTKAAFYEYNSCIMEPWDGPAMMAFTDGRFIGATLDRNGLRPSRYYVTDDDRVLLSSEVGVLPGEDDAGVKIKARLEPGKMFLVDLEKGAIIPDDVVKEDYASRLPYADWLERNMLNLKDW 494
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A7S2R1J9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1J9_9STRA) HSP 1 Score: 384 bits (985), Expect = 2.490e-132 Identity = 176/246 (71.54%), Postives = 203/246 (82.52%), Query Frame = 1
Query: 1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWT 738
V QYF+DL+ P F SHLALVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG++ S YFGD T+ LLP D+MSDSGNFDSVLEL KA DR +PE +M M+PEAWQDN LSD+K +FYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSRYY+T DD V+LSSE+GV+P+L D V K RLEPGKMFLVD + +IVPDD +KE A + PY W+ +SLI+L WT
Sbjct: 25 VSQYFLDLKDPTFLSHLALVHSRFSTNTFPSWERAQPMRMMCHNGEINTLRGNKNWMYSRGGMMASDYFGDATSQLLPATGDHMSDSGNFDSVLELMTKASDRSLPEAVMMMIPEAWQDNDNLSDSKKSFYEYNSCVMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRYYVTKDDHVILSSEIGVIPDLPDSEVKIKHRLEPGKMFLVDFETERIVPDDEIKEQMAAKYPYKDWIKKSLIDLEQWT 270
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A7S2YAL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YAL2_9STRA) HSP 1 Score: 375 bits (964), Expect = 6.730e-126 Identity = 169/245 (68.98%), Postives = 205/245 (83.67%), Query Frame = 1
Query: 1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDW 735
V QY+ DL+ PDF SHLALVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG+++S ++GD+T +LLP SDNMSDSGNFDSVLEL KA +R +PE +M M+PEAWQDN +LSDTK +FYEYNS +MEPWDGPAM+AFTD RYIGATLDRNGLRPSRYY+T+DD V+L+SE+GV P++ D V K RLEPGKMFLVD + +IVPDD +KE A + PYG+W++ L++L +
Sbjct: 30 VSQYYCDLKNPDFVSHLALVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMYSRGGIMESPFYGDDTTHLLPATSDNMSDSGNFDSVLELMTKASNRSLPEAVMMMIPEAWQDNLYLSDTKKSFYEYNSAVMEPWDGPAMVAFTDSRYIGATLDRNGLRPSRYYVTNDDVVILASEIGVCPDVPDSEVKIKHRLEPGKMFLVDFETQRIVPDDEIKEQVAAQHPYGEWVENGLVDLEQY 274
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: D8LCE0_ECTSI (Glutamate synthase (NADH/NADPH-dependent), C-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE0_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 2.620e-125 Identity = 185/211 (87.68%), Postives = 197/211 (93.36%), Query Frame = 1
Query: 118 MMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHSK 750
MMCHNGEINTLRGNKNWMHARGGLL S YFGDETANLLP CSDNMSDSGNFDSVLEL+VKAGDREIPEVMM+MVPEAWQDNPFLSD K+AFYEYNSC MEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYY+TDDDRVLLSSEVGVLP+L DESVV KARLEPGKMFLVDLD G+IVPDD VKE YA RLPY +WL+++LIN+ WTEHS+
Sbjct: 1 MMCHNGEINTLRGNKNWMHARGGLLHSEYFGDETANLLPACSDNMSDSGNFDSVLELSVKAGDREIPEVMMSMVPEAWQDNPFLSDAKAAFYEYNSCSMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYVTDDDRVLLSSEVGVLPDLPDESVVKKARLEPGKMFLVDLDVGEIVPDDFVKEKYANRLPYAEWLEKNLINIKGWTEHSQ 211
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A7S1CWJ6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWJ6_CYCTE) HSP 1 Score: 372 bits (955), Expect = 4.280e-125 Identity = 171/247 (69.23%), Postives = 198/247 (80.16%), Query Frame = 1
Query: 1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTE 741
V YF+DL+ P F SH+ LVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG++ S +GDET LLP SD+MSDSGNFDSVLEL K +R +PE +M M+PEAWQDN LSDTK AFYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSRYY+T DD V+LSSE+GV P+L D V K RLEPGKMFLVD D +IVPDD +KE A PY +W++ +I+L W +
Sbjct: 157 VAAYFLDLKDPTFISHMGLVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMYSRGGIMASDIYGDETMQLLPATSDHMSDSGNFDSVLELLTKGSNRSLPESVMMMIPEAWQDNDNLSDTKKAFYEYNSCVMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRYYVTKDDHVMLSSEIGVCPDLPDAEVKIKHRLEPGKMFLVDFDTQRIVPDDEIKEEVASMRPYAEWVENGIIDLETWVK 403
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: B8CBI7_THAPS (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBI7_THAPS) HSP 1 Score: 384 bits (985), Expect = 3.560e-120 Identity = 175/249 (70.28%), Postives = 205/249 (82.33%), Query Frame = 1
Query: 1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHS 747
V QY++D++ P F SHLALVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM +RGGL+ S YFG++T LLP SDNMSDSGNFDSVLEL K +R +PE +M M+PEAWQDNP LS++K AFYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSRYY+T DD V+LSSE+GV+P LKD V K RLEPGKMFLVD + +IVPDD +KE + PYG W+ +S+I+L WT+ +
Sbjct: 203 VSQYYLDIKDPQFISHLALVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMFSRGGLMASDYFGNDTHQLLPATSDNMSDSGNFDSVLELMAKGSERSLPEAVMMMIPEAWQDNPNLSESKKAFYEYNSCLMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRYYVTKDDHVVLSSEIGVIPELKDSDVKIKHRLEPGKMFLVDFETQRIVPDDEIKEQISSLHPYGDWVQESMIDLEKWTQEA 451
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A482SR36_9ARCH (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SR36_9ARCH) HSP 1 Score: 359 bits (922), Expect = 5.120e-120 Identity = 174/252 (69.05%), Postives = 198/252 (78.57%), Query Frame = 1
Query: 1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETAN--LLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHSK 750
V Y+ DLQ F+SH+ALVHSRFSTNTFPSW RAQPNRMMCHNGEINTLRGNKNWM++R GL+ S FG++ LLP SD+MSDSGNFDSVLEL K R +PE +M M+PEAWQDN LS +KSAFYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSR+Y+T DD VLLSSE+GVLP+L + SV K+RLEPGKMFLVD DQ KIV D +KE A Y KWL +L L DW + SK
Sbjct: 99 VFDYYHDLQSEHFSSHMALVHSRFSTNTFPSWERAQPNRMMCHNGEINTLRGNKNWMYSRSGLMTSPLFGEDVGGEKLLPT-SDDMSDSGNFDSVLELLAKGSPRILPECIMMMIPEAWQDNIHLSQSKSAFYEYNSCVMEPWDGPAMIAFTDGRYIGATLDRNGLRPSRFYVTKDDVVLLSSEIGVLPDLPETSVKLKSRLEPGKMFLVDFDQEKIVSDHIIKEEVAKTRDYSKWLQDNLFTLDDWVQASK 349
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A7S3VBN2_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBN2_9STRA) HSP 1 Score: 382 bits (980), Expect = 3.850e-119 Identity = 175/249 (70.28%), Postives = 206/249 (82.73%), Query Frame = 1
Query: 1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDWTEHS 747
V QY++DL+ P F SHL+LVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG++ S Y+GDET+ LLP D+MSDSGNFDSVLEL KA DR +PE +M M+PEAWQDN LS++K AFYEYNS IMEPWDGPAM+AFTDGRYIGATLDRNGLRPSRYY+T+DD V+LSSE+GV+P LKD V K RLEPGKMFLVD + +IVPDD +KE A + PY +W+D ++I+L WT S
Sbjct: 294 VSQYYLDLKDPSFVSHLSLVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMYSRGGIMGSDYYGDETSQLLPATGDHMSDSGNFDSVLELMAKASDRSLPECVMMMIPEAWQDNHNLSESKKAFYEYNSAIMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRYYVTNDDHVILSSEIGVIPELKDTDVKIKHRLEPGKMFLVDFETERIVPDDEIKEQIASQAPYKEWVDDNMIDLEKWTSVS 542
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Match: A0A6V2D782_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2D782_9STRA) HSP 1 Score: 375 bits (964), Expect = 5.810e-119 Identity = 172/245 (70.20%), Postives = 201/245 (82.04%), Query Frame = 1
Query: 1 VMQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRGNKNWMHARGGLLDSAYFGDETANLLPVCSDNMSDSGNFDSVLELTVKAGDREIPEVMMTMVPEAWQDNPFLSDTKSAFYEYNSCIMEPWDGPAMMAFTDGRYIGATLDRNGLRPSRYYITDDDRVLLSSEVGVLPNLKDESVVTKARLEPGKMFLVDLDQGKIVPDDTVKETYAGRLPYGKWLDQSLINLSDW 735
V+QY++DLQ P F SH++LVHSRFSTNTFPSW RAQP RMMCHNGEINTLRGNKNWM++RGG++ S YFG+ T LLP SDNMSDSGN DSVLEL KA DR +PE +M M+PEAWQDN L+D+K AFYEYNSC+MEPWDGPAM+AFTDGRYIGATLDRNGLRPSR+Y+T DD VLLSSE+GV+P+L D V K RLEPGKMFLVD + +IVPDD +KE A + PY +W+ LI+L W
Sbjct: 280 VIQYYLDLQDPAFISHMSLVHSRFSTNTFPSWERAQPIRMMCHNGEINTLRGNKNWMYSRGGIMASDYFGNSTQQLLPATSDNMSDSGNLDSVLELLSKASDRSLPECVMMMIPEAWQDNHNLTDSKKAFYEYNSCVMEPWDGPAMVAFTDGRYIGATLDRNGLRPSRFYVTKDDHVLLSSEIGVIPDLPDSEVKIKHRLEPGKMFLVDFETERIVPDDEIKEVIAAQKPYAEWVQNGLIDLEKW 524 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5547.13038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5547.13038.1 >prot_H-paniculata_contig5547.13038.1 ID=prot_H-paniculata_contig5547.13038.1|Name=mRNA_H-paniculata_contig5547.13038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp MQYFVDLQQPDFTSHLALVHSRFSTNTFPSWNRAQPNRMMCHNGEINTLRback to top mRNA from alignment at H-paniculata_contig5547:205..1995- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5547.13038.1 ID=mRNA_H-paniculata_contig5547.13038.1|Name=mRNA_H-paniculata_contig5547.13038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1791bp|location=Sequence derived from alignment at H-paniculata_contig5547:205..1995- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5547:205..1995- >mRNA_H-paniculata_contig5547.13038.1 ID=mRNA_H-paniculata_contig5547.13038.1|Name=mRNA_H-paniculata_contig5547.13038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at H-paniculata_contig5547:205..1995- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |