mRNA_H-paniculata_contig5483.12948.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: D8LHB4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB4_ECTSI) HSP 1 Score: 108 bits (269), Expect = 1.780e-26 Identity = 53/75 (70.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query: 1 QGTIILCVALGTIPVVGGAVTLLAGPGLLLAGLLVMFAGATGLGDSLSPWPAPVKDNELTTTGIYGVIRHPLYSG 225
QG I++ VA+G+IPVVGG V LAGPGLL GL V+ AG GLG SLSPWPAPVKDNEL T GIYGV+RHP+Y+G
Sbjct: 264 QGAILIFVAMGSIPVVGGLVMALAGPGLLAGGLGVIAAGVNGLGKSLSPWPAPVKDNELNTDGIYGVMRHPMYTG 338
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: A0A6H5K0K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K2_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.380e-26 Identity = 52/75 (69.33%), Postives = 61/75 (81.33%), Query Frame = 1
Query: 1 QGTIILCVALGTIPVVGGAVTLLAGPGLLLAGLLVMFAGATGLGDSLSPWPAPVKDNELTTTGIYGVIRHPLYSG 225
QG I++ VA+G+IPVVGG V LAGPGLL GL V+ AG GLG SLSPWPAP+KDNEL T GIYGV+RHP+Y+G
Sbjct: 313 QGAILIFVAMGSIPVVGGLVMALAGPGLLAGGLGVIAAGVNGLGKSLSPWPAPIKDNELNTDGIYGVMRHPMYTG 387
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: A0A7S0ATK5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ATK5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 8.520e-16 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 1 QGTIILCVALGTIPVVGGAVTLLAGPGLLLAGLLVMFAGATGLGDSLSPWPAPVKDN----ELTTTGIYGVIRHPLYSG 225
Q +++L +ALGT+P VG A++ GPGL+ GL++++ A LG +LSPWP P N L TG+Y ++RHP+YSG
Sbjct: 3 QFSLLLFIALGTVPFVGDALSFTLGPGLVGVGLVIVYKAAVDLGTNLSPWPTPADPNTGRGSLVDTGVYSLMRHPMYSG 81
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: B8LBH8_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBH8_THAPS) HSP 1 Score: 72.0 bits (175), Expect = 3.410e-14 Identity = 30/75 (40.00%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 1 QGTIILCVALGTIPVVGGAVTLLAGPGLLLAGLLVMFAGATGLGDSLSPWPAPVKDNELTTTGIYGVIRHPLYSG 225
Q +++L +A+G +P +G A+T GP ++L GL +++ A+ L ++LSP+P P + L +GIYG++RHP+Y+G
Sbjct: 11 QFSLLLFIAIGDVPFIGDAITTFLGPSMILLGLFIVYKSASDLKNNLSPYPVPSEKGALIDSGIYGLMRHPMYTG 85
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: A0A7S4A6W4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6W4_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.380e-13 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 1 QGTIILCVALGTIPVVGGAVTLLAGPGLLLAGLLVMFAGATGLG-DSLSPWPAPVKDNELTTTGIYGVIRHPLYSG 225
Q ++L + +G +PVVGGA+ L GPGL++AG+ + G LG +L+P+ APV+ NEL TTG + +RHP+Y G
Sbjct: 103 QAALLLLLLVGDVPVVGGAIETLLGPGLVVAGIGAIAKGVLDLGAGNLTPFAAPVEGNELKTTGAFSYVRHPIYGG 178
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: A0A6U9R4H7_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9R4H7_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 5.980e-10 Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 76 PGLLLAGLLVMFAGATGLGDSLSPWPAPVKDNELTTTGIYGVIRHPLYSG 225
P L+ +GLLV+ AG + LG +LSP+P P K N+L T GIYG+IRHP+Y+G
Sbjct: 158 PLLIPSGLLVIAAGQSVLGGNLSPFPEPSKTNQLVTGGIYGMIRHPMYTG 207
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: A0A0P9CYA1_9CHLR (Uncharacterized protein n=1 Tax=Kouleothrix aurantiaca TaxID=186479 RepID=A0A0P9CYA1_9CHLR) HSP 1 Score: 60.8 bits (146), Expect = 7.800e-10 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 88 LAGLLVMFAGATGLGDSLSPWPAPVKDNELTTTGIYGVIRHPLYSG 225
LAG V AGA LG +L+P+P P+ D EL TGIYGV+RHP+Y+G
Sbjct: 54 LAGGGVAVAGARALGRNLTPFPRPIADGELVETGIYGVVRHPIYTG 99
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: A0A3D8YAI1_9BACT (Isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Dyadobacter luteus TaxID=2259619 RepID=A0A3D8YAI1_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 1.330e-9 Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 70 AGPGLLLAGLLVMFAGATGLGDSLSPWPAPVKDNELTTTGIYGVIRHPLYSG 225
AG L LAGLLV+ A L SL+P+P+PVK+ EL T+G+Y IRHP+YSG
Sbjct: 38 AGAILALAGLLVILAAVYQLRRSLTPFPSPVKNGELITSGLYRYIRHPIYSG 89
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: A0A1X6NWT9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWT9_PORUM) HSP 1 Score: 61.6 bits (148), Expect = 1.970e-9 Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 58 VTLLAGPGLLLAGLLVMFAGATGLG-DSLSPWPAPVKDNELTTTGIYGVIRHPLYSG 225
V+ + GP +L++G ++ GA LG +S WPAPV D L T GIYGVIRHPLYSG
Sbjct: 188 VSFIVGPVVLISGAILSVKGAWDLGRKQISLWPAPVPDGTLKTKGIYGVIRHPLYSG 244
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Match: U5QGB8_9CYAN (Protein-S-isoprenylcysteine methyltransferase n=2 Tax=Gloeobacter TaxID=33071 RepID=U5QGB8_9CYAN) HSP 1 Score: 59.7 bits (143), Expect = 2.180e-9 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 52 GAVTLLAGPGLLLAGLLVMFAGATGLGDSLSPWPAPVKDNELTTTGIYGVIRHPLYSG 225
GA+ L G L G LV+ +GLG +LSP+P PV D +L T+G+Y ++RHPLY+G
Sbjct: 39 GALWTLLGGLLTALGSLVLLLAVSGLGRNLSPFPRPVPDGQLVTSGLYALVRHPLYTG 96 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5483.12948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5483.12948.1 >prot_H-paniculata_contig5483.12948.1 ID=prot_H-paniculata_contig5483.12948.1|Name=mRNA_H-paniculata_contig5483.12948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp QGTIILCVALGTIPVVGGAVTLLAGPGLLLAGLLVMFAGATGLGDSLSPWback to top mRNA from alignment at H-paniculata_contig5483:8450..8674- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5483.12948.1 ID=mRNA_H-paniculata_contig5483.12948.1|Name=mRNA_H-paniculata_contig5483.12948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=225bp|location=Sequence derived from alignment at H-paniculata_contig5483:8450..8674- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5483:8450..8674- >mRNA_H-paniculata_contig5483.12948.1 ID=mRNA_H-paniculata_contig5483.12948.1|Name=mRNA_H-paniculata_contig5483.12948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=450bp|location=Sequence derived from alignment at H-paniculata_contig5483:8450..8674- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |