mRNA_H-paniculata_contig547.12931.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: D7FT85_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT85_ECTSI) HSP 1 Score: 734 bits (1894), Expect = 7.360e-256 Identity = 430/647 (66.46%), Postives = 478/647 (73.88%), Query Frame = 3
Query: 240 VQLLQPSTAPEVDYGVTSSTEEMGHRLLEEMKRGAEFWTMRAGVRQRVISSGLSRERDTERAVVRAMKDLGYHDELINVVYGAHANGVRRQRTGIGSLPQELRCLYPELYSPSXXXXXXXXXXPSMSMYHVGTTTAMHGGGQDGRRRGAGS-----------TEHEPLEHVRKACLRWRANVADELRALAAERGGQFARPRVEDAEVEGTVGSAGARGDSRDEAXXXXXXXXXXXXXXXXXXXXXX----------------GFLFDSTDLLEAVSAIRSPNRSDFLPVEGDWGMIHVHLRTPSLEELQVTYRDLSPELHQGGLDDRGGFGEDRQGRFASERLSQGRKVLKGGYASEAMEYAKRGVPDSMRPGVWRVILGLPKVLSRQDVAYFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWVLRHSEVDLHDLVPIGDEA--REDEGGLWSGGQGGCCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQPLQLAMPWIQFGFVTFLEADQVLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQAFMFPAW 2093
+ L STAPEVDYG + +E G R+L EMKR AEFW MRAGV++RV ++G S++RD+E+A+ RA+ +LGYHD++ NV +GAHA G+RRQ TGIGSLP ELRCLYPELY PS S S T T RR T+ EPL+HVRKAC RWRANVADELRALAAERGG+FARPR G+ +AG XXXXXXXXXXXXXXXXXXXXXX GFLFDS DLL+A+ LR SLEEL+ +YR+LSPELHQ GLDDRGGFGEDR F +ERLSQGRK+LK G+A EAMEYA+RGV DS+RP VWR ILGLPK L+ QD+ YF GLMSEV+RTELVTDELY LDVQFI+DDDKYFPFEETLHDVILAFSRDPWVLRHSE LHDLVPIG+ A +D L G GG CPPCGVQPFRGLVNYAAVLCFLFEEREAVYF LRTMFAR WCRLNAVRSGPGMLLRLL LFESL+QRH PRLV KL QLG+QPLQLAMPWIQFGFVT+LEADQVLLLWDRLLGYDSL+LL VLAA+V+VFRA LV+QV DAA VME+FSDGRQLEVVPLLQAFMFPAW
Sbjct: 20 LDLWCESTAPEVDYGDAHTVDERGRRVLHEMKREAEFWAMRAGVQERVSTAG-SKDRDSEKALARALDELGYHDQIRNVAHGAHARGLRRQITGIGSLPAELRCLYPELYPPSPRLPSRH----STSARTTATNTTNPSQAAPEIRRXXXXXXXXXXGEDDLTDPEPLDHVRKACSRWRANVADELRALAAERGGRFARPRAG-----GSPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGGFLFDSADLLDALQ-----------------------LRVKSLEELRESYRELSPELHQTGLDDRGGFGEDR---FTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKALTPQDLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSEATLHDLVPIGEGAVGADDWAFLSGAGAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFESLVQRHHPRLVRKLLQLGLQPLQLAMPWIQFGFVTYLEADQVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVMEIFSDGRQLEVVPLLQAFMFPAW 630
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: A0A6H5JP51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP51_9PHAE) HSP 1 Score: 633 bits (1633), Expect = 5.040e-218 Identity = 368/501 (73.45%), Postives = 397/501 (79.24%), Query Frame = 3
Query: 702 EPLEHVRKACLRWRANVADELRALAAERGGQFARPRVEDAEVEGTVGSAGARGDSRDEAXXXXXXXXXXXXXXXXXXXXXX----------------GFLFDSTDLLEAVSAIRSPNRSDFLPVEGDWGMIHVHLRTPSLEELQVTYRDLSPELHQGGLDDRGGFGEDRQGRFASERLSQGRKVLKGGYASEAMEYAKRGVPDSMRPGVWRVILGLPKV----LSRQDVAYFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWVLRHSEVDLHDLVPIGDEA--REDEGGLWSGGQGGCCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQPLQLAMPWIQFGFVTFLEADQ---------------VLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQAFMFPAW 2093
EPL++VRKAC RWRANVADELRALAAERGG+FARPR G+ +AG XXXXXXXXXXXXXXXXXXXXXX GFLFDS DLL+AVSAIRSPNRSDFLPVE +WGM+H+ LR SLEEL+ +YR+LSPEL Q GLDDRGGFGEDR F +ERLSQGRK+LK G+A EAMEYA+RGV DS+RP VWR ILGLPK L+ QD+ YF GLMSEV+RTELVTDELY LDVQFI+DDDKYFPFEETLHDVILAFSRDPWVLRHSE LHDLVPIG+ A +D L G GG CPPCGVQPFRGLVNYAAVLCFLFEEREAVYF LRTMFAR WCRLNAVRSGPGMLLRLL LFE RH PRLV KL QLGVQPLQLAMPWIQFGFVT+LEADQ VLLLWDRLLGYDSL+LL VLAA+V+VFRA LV+QV DAA VME+FSDGRQLEVVPLLQAFMFPAW
Sbjct: 36 EPLDYVRKACSRWRANVADELRALAAERGGRFARPRAG-----GSPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGTGGFLFDSADLLDAVSAIRSPNRSDFLPVEEEWGMVHLQLRVKSLEELRESYRELSPELRQTGLDDRGGFGEDR---FTAERLSQGRKILKAGFAPEAMEYARRGVADSLRPAVWRAILGLPKASKQALTPQDLEYFAGLMSEVDRTELVTDELYGLDVQFISDDDKYFPFEETLHDVILAFSRDPWVLRHSEATLHDLVPIGEGAVGADDWAFLSGAGAGGYCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFTLRTMFARFWCRLNAVRSGPGMLLRLLKLFE----RHHPRLVRKLLQLGVQPLQLAMPWIQFGFVTYLEADQASLCTTACSSSPCDLVLLLWDRLLGYDSLDLLSVLAASVLVFRAKLVLQVSDAAAVMEIFSDGRQLEVVPLLQAFMFPAW 524
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: A0A836CJW0_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW0_9STRA) HSP 1 Score: 360 bits (924), Expect = 1.090e-110 Identity = 234/496 (47.18%), Postives = 291/496 (58.67%), Query Frame = 3
Query: 702 EPLEHVRKACLRWRANVADELRALAAERGGQFARPRVEDAEVEGTVGSAGARGDSRDEAXXXXXXXXXXXXXXXXXXXXXXGFLFDSTDLLEAVSAIRSPNRSDFL--------------PVEGDWG-MIHVHLRTPSLEELQVTYRDLSPELHQGGLDDRGGFGE-------------DRQGRFASERLSQGRKVLKGGYASEAMEYAKRGVPDSMRPGVWRVILGLPKVLSRQDVA-----YFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWVLRHSEVDLHDLVPIGDEAREDEGGLWSGGQGGCCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQ-PLQLAMPWIQFGFVTFLEADQVLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQAFMFP 2087
E L HVR A W+ ++ E+ ALA E G A+PR + + XXXXXXXXXXXX GFLFDS DLL+AV+A+R+PNRS FL WG ++ + LRTP EL+ + +L+P Q LDD D Q RF ER + G L GG + +A+RGVP ++RPG+WR++LGLP + Q A + L+ EV R ELVTD LY LDV I DDDKYF FEE L DV++AF+RD V + V H +P G +G G PPCGVQPFRGLV+YAA LCFL+ ER VY A R M+ R+WCRLNA+RS PG LL LL LFE LL+ H P+L+LKL +LG+Q PL+LAMPWIQFGFV +LE +VL LWDR+L YDSL LLP LAAAV VFR+ V+ PDA V + F+DG L+ +PLLQAF+FP
Sbjct: 127 ELLSHVRAAEEDWQRSIRSEVLALAQEAGQPLAQPRRRGSXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXAAAPAK----GFLFDSMDLLDAVAAVRTPNRSAFLRGADSGGGXXXXXXXAADAWGGLVALSLRTPRAAELRARFVELAPAHRQSCLDDXXXXXXXXXXXXXXXXXXXDAQ-RFGDERRAAGEAALAGGLLRDVRRFARRGVPPALRPGLWRLMLGLPAAAADQAAAAAEAEHLEQLLEEVRRVELVTDGLYELDVLHIGDDDKYFVFEEVLRDVVMAFTRDATVPARAAVATHAPIP-----HRIAG---AGAPRGTVPPCGVQPFRGLVSYAAPLCFLWAERAPVYAAFRAMYVRYWCRLNAIRSAPGGLLHLLRLFEDLLRCHHPQLMLKLAELGIQQPLRLAMPWIQFGFVGYLEVGEVLQLWDRVLAYDSLSLLPALAAAVFVFRSAAVLAAPDADAVRDAFADGTCLKAIPLLQAFLFP 609
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: A0A8J2WGK4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WGK4_9STRA) HSP 1 Score: 331 bits (849), Expect = 9.920e-101 Identity = 195/467 (41.76%), Postives = 267/467 (57.17%), Query Frame = 3
Query: 702 EPLEHVRKACLRWRANVADELRALAAERGGQFARPRVEDAEVEGTVGSAGARGDSRDEAXXXXXXXXXXXXXXXXXXXXXXGFLFDSTDLLEAVSAIRSPNRSDFLPVEGDWGMIHVHLRTPSLEELQVTYRDLSPELHQGGLDDRGGFGEDRQGRFASERLSQGRKVLKGGYASEAMEYAKRGVPDSMRPGVWRVILGLPKVLSRQDVA-----YFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWVLRHSEVDLHDLVPIGDEAREDEGGLWSGGQGGCCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQPLQLAMPWIQFGFVTFLEADQVLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQAFMFP 2087
+ L V+KA +W A++ DELRA+A+ER R R + +E FLFDS DLL+A+S I SP+ ++ WG++ + LRT +L EL+ Y++L P Q G+DD G D+ +FA G K L G+ A YA+RGVP S+RP V+R +LGLP + Q + Y+ L V+ ELVTDELY +DVQ + DDD YF F+E L + +LAFSRD WV ++ V H +P ++ + G PPCGVQPFRG V+YAA L F+F ++YFA R +A+H+CRLN +R+ LL L +LFE L+ H PRL L Q+GV PL +A+PWIQFGFV L+ +QVLLLWDRLLG++ L LL VLAAA+ V+R++ ++Q E+F+DG LEVVPLLQ F++P
Sbjct: 85 DSLASVQKARKQWEASINDELRAIASERRVPLVRKRKKIVIK------------XXEEETDELIEMKVEEILSPTLVTPGTRFLFDSDDLLDAISHIESPSNNE------GWGLVKLQLRTATLTELRDKYKELHPSKRQYGVDDVTGDPRDKA-KFADAWHELGEKCLAEGHIPLARTYARRGVPPSLRPAVYRSLLGLPHMEDAQATSAFEERYYEDLRDRVDSIELVTDELYQMDVQHVADDDTYFIFDEMLGNCVLAFSRDSWVPKNCVVKTHAPLPCENDLMK----------GQPVPPCGVQPFRGFVSYAAPLTFVFGRETSLYFAFRAFYAQHFCRLNVLRTNQNTLLPLCALFERLVIEHHPRLFFYLVQVGVDPLAIALPWIQFGFVGLLDVEQVLLLWDRLLGFEDLALLSVLAAAIFVYRSEKLLQCSSLEEAREMFADGAVLEVVPLLQTFLWP 522
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: F0YBG1_AURAN (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBG1_AURAN) HSP 1 Score: 314 bits (805), Expect = 1.350e-96 Identity = 163/355 (45.92%), Postives = 229/355 (64.51%), Query Frame = 3
Query: 1035 WGMIHVHLRTPSLEELQVTYRDLSPELHQGGLDDRGGFGEDRQGRFASERLSQGRKVLKGGYASEAMEYAKRGVPDSMRPGVWRVILGLPKV-----LSRQDVAYFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWVLRHSEVDLHDLVPIGDEAREDEGGLWSGGQGGCCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQPLQLAMPWIQFGFVTFLEADQVLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQAFMF 2084
WG++ + L T + +L+ T+R+L P Q G R G+ + RF+ E + G++ L G+ A YA+RGVP S+RP ++RV+LGLP V S + AY+ L + V++ ELVTDEL+ +DVQ + D+D YFPFEE L +V+LAFSRDPWVL +S V H + + D G W G PPC VQPFRG V+Y A L F++E E +Y+ LR M+A+ WC+LN +R+ LL L LFE L+ + P+L L Q+GV PL +A+PWIQFGFV L+ DQVLLLWDR+LG++ L LLP+LAAA+ V+R++ ++ V ++FSDG L+VVPL+Q F+F
Sbjct: 1 WGVVKLQLHTEPVRKLRETFRELHPSKRQRG---RRKLGDAQADRFSDEWHALGKRCLARGHVPLARRYARRGVPPSLRPQIYRVLLGLPNVEHPQGCSEAEKAYYARLKAHVDKIELVTDELFQMDVQHVADNDYYFPFEEALGNVVLAFSRDPWVLHNSAVRTHARLAAKHKEPTD-GPAWKAGS--AVPPCAVQPFRGFVSYTAPLTFVYEREEPIYYCLRAMYAKFWCKLNVMRTAECTLLPLCKLFEQLVIENHPKLFFYLVQIGVDPLAVALPWIQFGFVGLLDVDQVLLLWDRILGFEDLSLLPILAAAIFVYRSEKLLSATSLDDVKDMFSDGSILQVVPLIQTFLF 349
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: A0A7S3YGJ5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGJ5_HETAK) HSP 1 Score: 263 bits (672), Expect = 3.260e-78 Identity = 140/282 (49.65%), Postives = 185/282 (65.60%), Query Frame = 3
Query: 1230 AMEYAKRGVPDSMRPGVWRVILGL-PKVLSRQDVAYFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWVLRHSEVDLHDLVPIGDEAREDEGGLWSGGQGGCCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQPLQLAMPWIQFGFVTFLEADQVLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQ 2072
A +YAK+GVP ++R G+WR LGL P + A+FR L+SE +R +L+TD+L+ +DVQFI DDD+YF FE+ L D + AFSRD VLR S+V H + +G G PPCGVQPFRG NY A LCFL+ + Y R ++ R WCRLNAVR PG LL L LFE L+ + P +L LGV PL + MPWIQFGFV FLE DQ+LLLWDR++G+ SL LLPVLAA++I+FR+ +++V A + ++F D +L+VVPLL+
Sbjct: 1 ARQYAKQGVPTALRAGIWRCALGLRPSGAIAGESAHFRWLLSEGQRIDLITDDLFEMDVQFIADDDRYFVFEDMLRDCVGAFSRDAQVLRGSDVLPHQPL-VGHHGEGQAPGT-------AVPPCGVQPFRGFCNYLAPLCFLYHDAPTCYGVARALWCRFWCRLNAVRGRPGTLLPLCKLFEDLVLQGAPDAFARLVALGVSPLSIVMPWIQFGFVGFLEPDQILLLWDRIIGFQSLHLLPVLAASIIMFRSHNILKVDSADGLRDLFQDITRLKVVPLLR 274
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: A0A7S2H1X2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H1X2_9STRA) HSP 1 Score: 265 bits (676), Expect = 5.790e-78 Identity = 141/317 (44.48%), Postives = 194/317 (61.20%), Query Frame = 3
Query: 1170 FASERLSQGRKVLKGGYASEAMEYAKRGVPDSMRPGVWRVILGLPKVLSRQDVAYFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWV-------LRHSEVDLHDLVPIGDEAREDEGGLWSGGQGGCC---PPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQPLQLAMPWIQFGFVTFLEADQVLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQAFMFPA 2090
F + +G +++ GY ++A+ GV ++RP +WR++LGL ++ + ++ L SEV+R E TD L +DV +D + YFPFE+ L V+LAFSRD WV H +D DL D+GG + C PP GV PF+GL++YAA L LFEE +AV+ R M+AR+WCRLN +R+ G LL L LFE LLQ H PRL L + G+QPL +A+PWIQF FV L+ QVL+LWDR+LG+D L LLPVLA A+ +FR+ VM + D A + EVF +G +L V PLLQ +FP+
Sbjct: 19 FVGQAQKRGHSLIQDGYIPAVRQFARTGVCVALRPRMWRIMLGLKSDVTAGESDHYAKLTSEVQRVEYATDGLLEMDVSQSSDLENYFPFEDLLKSVVLAFSRDAWVRGMSMFQTHHPLIDPADLDSTSTSPERDKGG-----RSNCLKMVPPSGVLPFKGLMSYAAPLTLLFEEEDAVFSVFRAMYARYWCRLNVLRTAEGTLLPLCHLFEELLQCHDPRLFFHLTRSGIQPLAIALPWIQFAFVGLLDPGQVLVLWDRILGFDDLALLPVLACAIFIFRSPTVMGIADKAGIEEVFLEGTELRVAPLLQHLVFPS 330
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: A0A0G4ISX4_PLABS (Rab-GAP TBC domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISX4_PLABS) HSP 1 Score: 264 bits (675), Expect = 3.850e-75 Identity = 173/491 (35.23%), Postives = 255/491 (51.93%), Query Frame = 3
Query: 699 HEPLEHVRKACLRWRANVADELRALAAERGGQFARPRVEDAEVEGTVGSAGARGDSRDEAXXXXXXXXXXXXXXXXXXXXXXGFLFDSTDLLEAVSAIRSPNRSDFLPVEGDWGMIHVHLRTPSLEELQVTYRDLSPELHQGGLDDRGGFGEDRQGRFASERLSQGRKVLKGGYASEA--MEYAKRGVPDSMRPGVWRVILGLPKVLSRQDVAYFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWVLRHSEVDL-----------HDLVPIGDEARE---------------DEGGLWSGGQG-GCCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQPLQLAMPWIQFGFVTFLEADQVLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQAFMF 2084
+EPLE V L+W + +LRA AA++ PR + S+ AR D + +F DLL + + +PN + +G+I + L+TPSL L+ YR LSP++ GLDD E F ++R +G ++L + A M YA+ GVP S+RP W+ ILG+ S +DVAY+ L+++V R EL+TD+LY L+VQ TD+ YF FE+ L +++LAFSRD W+ ++S + L VP D+ + G+ QG PPCGV PF V AA LC+LF+ E YF R M+AR++CRL+ + S PG +L L LFE L+Q P++ ++G+ PL++ PW+ F +L DQVL LWDR+L YDSLELL +LA+A+ +FR+ V+ + + ++F DG V+PLLQ F+F
Sbjct: 96 YEPLEFVEAVRLQWDTRMRYQLRAFAAQQKRPLIAPRSK---------SSAARDDVAEPFPAH--------------------LVFSWADLLSDLENLVNPNATATFSNLKGFGLIKLSLKTPSLATLRERYRQLSPDVRHVGLDDELAGLE----WFRNQRYVEGERLLNDAQTTVADLMRYAQTGVPASLRPRFWKRILGV--WTSDRDVAYYERLITQVRRWELITDDLYRLEVQETTDNAAYFVFEDMLDEIMLAFSRDSWLPKNSTLPLCLAPLTTNVFSEAAVPGRDDGAGYPFADANGKLSPSLVENSGIEIDDQGTATIPPCGVVPFHHQVMLAAPLCYLFQRCEHTYFVFRHMYARYFCRLHTISSRPGTILHLCKLFEDLVQSRSPQVFYHAVEVGMPPLRVVFPWLFTAFSGYLAVDQVLTLWDRILAYDSLELLAILASAIFLFRSKSVLNATSSDEIRDIFEDGIYFRVMPLLQHFLF 551
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: A0A7S0Q1S4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q1S4_9EUKA) HSP 1 Score: 252 bits (643), Expect = 8.830e-72 Identity = 151/379 (39.84%), Postives = 216/379 (56.99%), Query Frame = 3
Query: 951 LFDSTDLLEAVSAIRSPNRSDFLPVEGDWGMIHVHLRTPSLEELQVTYRDLSPELHQGGLDDRGGFGEDRQGRFASERLSQGRKVLKGGYASEAMEYAKRGVPDSMRPGVWRVILGLPKVLSRQDVAYFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWVLRHS-EVDLHDLVPIGDEAREDEGGLWSGGQGGCCPPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQPLQLAMPWIQFGFVTFLEADQVLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQAFMF 2084
L++S +LLE ++A++ N S + W M +HLR PS +EL+V + DL P++ QGG+DD + FA ER G ++L GY + +A+ GVP MR VW L + L +D +Y+ L+SE+ R V D L DV +++ YF F + + +++L F RDP VL+ S E H V + A GQ PP G+ P RGL YA LC+ F +E +Y+ R M+ R+WC+L+ S PG LL LL++FES LQ QP L L +L + P +A PWI + F ++L +QVLLLWDR++G+DSL LPVLAA++ FRA +MQ DA + D +L+VVPLLQA +F
Sbjct: 82 LYESDELLEHIAAVQHDNASAAVTGVRSWAMCPLHLRMPSQQELRVLFADLDPKVRQGGIDDA------IRAWFAEERHRMGLRLLSHGYTALLAHFARTGVPAGMRGRVWCGALQVQ--LCERDYSYYAQLVSEISRISQVLDPLVKRDVAIPFNEEDYFVFCDKIEELLLCFMRDPAVLQKSAESGWH--VRASNRA----------GQQSVFPPNGLLPPRGLSQYAFPLCYAFHAQEELYYLFRAMWTRYWCKLHCFSSRPGTLLHLLAVFESTLQELQPALCWHLLELELHPTTVAFPWILYAFSSYLPVEQVLLLWDRVVGFDSLLPLPVLAASIFAFRASALMQAQDADRARRILMDPSKLQVVPLLQAVLF 440
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Match: A0A0H5RE29_9EUKA (Rab-GAP TBC domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RE29_9EUKA) HSP 1 Score: 252 bits (643), Expect = 1.300e-70 Identity = 169/494 (34.21%), Postives = 251/494 (50.81%), Query Frame = 3
Query: 699 HEPLEHVRKACLRWRANVADELRALAAERGGQFARPRVEDAEVEGTVGSAGARGDSRDEAXXXXXXXXXXXXXXXXXXXXXXGFLFDSTDLLEAVSAIRSPNRSDFLP--VEGDWGMIHVHLRTPSLEELQVTYRDLSPELHQGGLDDRGGFGEDRQGRFASERLSQGRKVLKGGYAS--EAMEYAKRGVPDSMRPGVWRVILGLPKVLSRQDVAYFRGLMSEVERTELVTDELYTLDVQFITDDDKYFPFEETLHDVILAFSRDPWVLRHSEVDLH--------------------------DLVPIGDEAREDEG-GLWSGGQGGCC-PPCGVQPFRGLVNYAAVLCFLFEEREAVYFALRTMFARHWCRLNAVRSGPGMLLRLLSLFESLLQRHQPRLVLKLGQLGVQPLQLAMPWIQFGFVTFLEADQVLLLWDRLLGYDSLELLPVLAAAVIVFRADLVMQVPDAATVMEVFSDGRQLEVVPLLQAFMF 2084
+EPL+ V K ++W + + +LRA+A+ + PR+ SRD ++ TDLL + + +PN + + G +G + + LRTP+L+ L+ Y LSP + GLDD G F S++ S G ++L S E M YA+ G+P S+RP W+ ILG+ S +D+A++ L+S+V R +++TD+LY L+VQ TD+ YF FE+ L +++LAFSRD WV R+S + L VP+ E GL QG PPC + PF V AA LC+LF++ E YF R M+AR++CRL+ + S ++ L LFE L+Q P++ + G+ PL++ PW+ F +L DQVL+LWDR+L YDSLELL VLAAA+ VFR+ VM + ++F DG V+PLLQ F+F
Sbjct: 92 YEPLDFVEKLRMQWDSRMRYQLRAIASHQKRPLLMPRIRP---------------SRDRDQEEQFPSH---------------LIYSWTDLLNEIENLSNPNAASSAENNITG-FGSVKLCLRTPTLDLLRRRYCQLSPNIRHVGLDDE----LSGLGWFRSQQNSDGERLLNDTRTSTAELMVYAQTGIPASLRPRFWKRILGVWS--SERDLAHYEKLISQVRRWDMITDDLYRLEVQETTDNAAYFVFEDMLDEMMLAFSRDSWVPRNSILPLSVAPLTTNIFDDSENSQIIPSNSHQPPQFVPVQKSLTAMENSGLELNDQGDTIIPPCQIVPFHLQVMLAAPLCYLFQQAEQTYFVYRQMYARYFCRLHLISSRKDTIIYLCKLFEDLVQSDSPQVFYHAVEAGLPPLRVVFPWLFTAFSGYLAVDQVLILWDRILAYDSLELLSVLAAAIFVFRSKSVMNASSGDEIRDIFEDGAHFRVLPLLQHFLF 548 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig547.12931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig547.12931.1 >prot_H-paniculata_contig547.12931.1 ID=prot_H-paniculata_contig547.12931.1|Name=mRNA_H-paniculata_contig547.12931.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=632bp MEKGGFDDDEVPRVQLLQPSTAPEVDYGVTSSTEEMGHRLLEEMKRGAEFback to top mRNA from alignment at H-paniculata_contig547:11593..29070- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig547.12931.1 ID=mRNA_H-paniculata_contig547.12931.1|Name=mRNA_H-paniculata_contig547.12931.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=17478bp|location=Sequence derived from alignment at H-paniculata_contig547:11593..29070- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig547:11593..29070- >mRNA_H-paniculata_contig547.12931.1 ID=mRNA_H-paniculata_contig547.12931.1|Name=mRNA_H-paniculata_contig547.12931.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3792bp|location=Sequence derived from alignment at H-paniculata_contig547:11593..29070- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |