mRNA_H-paniculata_contig546.12919.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: D8LE65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE65_ECTSI) HSP 1 Score: 307 bits (787), Expect = 1.420e-100 Identity = 237/320 (74.06%), Postives = 268/320 (83.75%), Query Frame = 1
Query: 1 IMACILAITR-LAVRIAARPIFAGDMRDPP------PDSDMVFEELPEGFHNDVDSISVAVGGRHTCALEYRPGVDFGGPVRCWGRDDYGQCSPSDEIFVQVSAGDRHTCGVKVDQTVSCWGRTQTAPRGFFQXXXXXXXXXXXXXXXXXXXXXXDDLFGSTSKVPRGARFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRGETEFRVGPWQQVTCGEWTTCGIRKLDGGIECWGLRKVNKTDSSYEEVSSSHSHTCALDIDGQLECWGDAQRAEIVPDGFLVA 939
++AC+L + R L VR AA P GD RD ++VFE+LPEGFH+D+DSI+VAVGG HTCALEYRPGVDFGGPVRCWGRDD+GQ PSD+IFVQVSAG+RHTCG+K+DQTVSCWG +PRGFFQXXXXXXXXXXXXXXXXXXXXXXDD+ GSTS VP FV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ET+FR GPW QVTCG+WTTCGIRK DGG+ECWG++ +NKT + YEEVSS+ HTCA+D +G++ECWGDA +AE+VPDGF A
Sbjct: 11 LVACVLVVDRSLEVRAAAEPSSGGDRRDTTLAGLAAETQEVVFEDLPEGFHDDIDSITVAVGGHHTCALEYRPGVDFGGPVRCWGRDDWGQSMPSDDIFVQVSAGNRHTCGIKIDQTVSCWGHMPFSPRGFFQXXXXXXXXXXXXXXXXXXXXXXDDIAGSTSGVPANTTFVQVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETQFRRGPWYQVTCGQWTTCGIRKHDGGVECWGVKTLNKTGAFYEEVSSADFHTCAVDENGEVECWGDALQAELVPDGFQAA 330
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: A0A7S2SKA4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA4_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.580e-33 Identity = 148/286 (51.75%), Postives = 186/286 (65.03%), Query Frame = 1
Query: 106 FEELPEGFHNDVDSISVAVGGRHTCALEYRPGVDFGGPVRCWGRDDYGQCSPSDEIFVQVSAGDRHTCGVKVDQTVSCWGRTQTAPRGFFQXXXXXXXXXXXXXXXXXXXXXXDDLFGSTSKVPRGARFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRGETEFRVGPWQQVTCGEWTTCGIRKLDGGIECWG-LRKVNKTDS---SYEEVSSSHSHTCALDIDGQLECWG----DAQRAEIVPDGFLVA 939
F+ L EGF+ D+D + + G HTCALE RP V+FGG VRCWG +++GQ SP +F+QVS+G TCG+++D+TV+CWG A XXXXXXXXXXXXXXXXXXXXXX + +T++ XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX ++ R GP+ QV+ G TC IR DG IECWG + +++ T+ +E+V+S HTC ++ + +L CWG D + A VP FLVA
Sbjct: 34 FDRLEEGFYADLDGTAASAGFFHTCALEMRPSVEFGGVVRCWGFNEHGQASPPPGVFIQVSSGHLFTCGIRMDETVACWGAMSQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHV-PATNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPTSSQFKQVSASSFNHXXXXXXXXXXXXXXXXXXXXQSTNRKGPFAQVSAGNKVTCAIRDSDGHIECWGAVNRLSTTEDLPHEWEQVTSGFHHTCGINANSELSCWGPTFKDVESAIAVPGNFLVA 318
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: A0A7S1UCR5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCR5_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.370e-28 Identity = 126/296 (42.57%), Postives = 155/296 (52.36%), Query Frame = 1
Query: 97 DMVFEELPEGFHNDVDSISVAVGGRHTCALEYRPGVDFGGPVRCWGRDDYGQCSPSDEIFVQVSAGDRHTCGVKVDQTVSCWGRTQTAPRGFFQXXXXXXXXXXXXXXXXXXXXXXDDL---FGSTSKVPRGARFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM-RGETEFRVGPWQQVTCGEWTTCGIRKLDGGIECWGL--------RKVNKTDSS-YEEVSSSHSHTCALDIDGQLECWGD--AQRAEIVPDGFLVA 939
D F ELPEGFH D+D +SV+VG H CA+EY GGP+RCWG + GQ P F+QVSAG HTC + VDQT+ CWGR + R XXXXXXXXXXXXXXXXXXXXXX GS + XXXXXXXXXXXXXXXXXXXXX +GE + R G ++QVT G CG+R D +ECWG +V S+ +++VS +S C +++DG++ CWG A VP+G L A
Sbjct: 24 DGTFTELPEGFHADLDEVSVSVGEYHACAIEYDETQPMGGPLRCWGGNTEGQSDPPGGTFMQVSAGAMHTCALSVDQTIECWGRVEPHDRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGLGSNEDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPDFDRLDVPMGVQFKQVSASTYYNSCGVTLDGDIRCWGFKRATKGEVDDRPGSFKQVTSGRRHNCGLRADDHSLECWGKISGHLVIQNQVEAVRSARWDQVSLGNSFACGVNLDGEVLCWGSPSAIGETNVPEGLLAA 319
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: A0A835Z3U7_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3U7_9STRA) HSP 1 Score: 101 bits (252), Expect = 7.790e-22 Identity = 129/240 (53.75%), Postives = 150/240 (62.50%), Query Frame = 1
Query: 271 IFVQVSAGDRHTCGVKVDQTVSCWGRTQTAPRGFFQXXXXXXXXXXXXXXXXXXXXXXDDLFGSTSKVPRGARFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMR-----------------GETEFRVGPWQQVTCGEWTTCGIRKLDGGIECWGLRKVNKTDSSYEEVSSSHSHTCALDIDGQLECWGDAQRAEIVPDGFLVA 939
+FVQ+SAG HTCGVKVDQT++CWG + AP G +QXXXXXXXXXXXXXXXXXXXXXXD+ FG + P GA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + GE R GP++QV+CG ++TC I +D CWG + + YE V + H+H C + DG L+CWG A AE VPDGF VA
Sbjct: 1 MFVQLSAGTSHTCGVKVDQTLACWGAFRGAPGGLYQXXXXXXXXXXXXXXXXXXXXXXDNAFGKC-RHPGGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASPTGHACGVTVAAAAVTGKSGSKSGNGGGGDVVCWGRNFDGEAAPRAGPFRQVSCGAYSTCAISAVDDTAACWGATRTSSRGPFYELVIA-HAHACGIGADGGLQCWGSASGAERVPDGFQVA 238
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: A0A067D4P3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D4P3_SAPPC) HSP 1 Score: 93.6 bits (231), Expect = 2.230e-18 Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 130 HNDVDSISVAVGGRHTCALEYRPGVDFGGPVRCWGRDDYGQCSPSDEIFVQVSAGDRHTCGVKVDQTVSCWG 345
H D+D +V+ G HTCA+ DFGG V CWG D GQ SP D F+QVS+G HTCGVK+D+TV+CWG
Sbjct: 27 HVDIDDTTVSAGISHTCAIHSVSAADFGGKVLCWGDDSMGQASPPDAEFIQVSSGRFHTCGVKLDETVACWG 98
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: A0A1V9YN74_9STRA (Uncharacterized protein n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN74_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.170e-17 Identity = 42/85 (49.41%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 91 DSDMVFEELPEGFHNDVDSISVAVGGRHTCALEYRPGVDFGGPVRCWGRDDYGQCSPSDEIFVQVSAGDRHTCGVKVDQTVSCWG 345
+S +F P H D+D +V+ G HTCA+ DFGG V CWG D GQ SP D F+QVS G H+CGVK+D+TV CWG
Sbjct: 40 ESTPLFGRSPAIQHLDIDDTTVSAGIGHTCAIHSVSAADFGGKVLCWGEDMLGQSSPPDAEFIQVSCGRFHSCGVKLDETVECWG 124
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: W4H5W5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5W5_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.570e-16 Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 130 HNDVDSISVAVGGRHTCALEYRPGVDFGGPVRCWGRDDYGQCSPSDEIFVQVSAGDRHTCGVKVDQTVSCWG 345
H D+D +V+ G H+CA+ VDFGG V CWG + +GQ SP D F+QVS+G HTCGV +D+TV CWG
Sbjct: 109 HLDIDDTTVSAGIEHSCAIHSVSTVDFGGKVVCWGDNTFGQSSPPDVEFIQVSSGRFHTCGVTLDETVECWG 180
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: A0A1W0A4G8_9STRA (Uncharacterized protein n=2 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4G8_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 8.860e-15 Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 130 HNDVDSISVAVGGRHTCALEYRPGVDFGGPVRCWGRDDYGQCSPSDEIFVQVSAGDRHTCGVKVDQTVSCWG 345
H D+D +V+ G H+CA+ DFGG V CWG + GQ D F+QVS+G H+CGVK+D+T+ CWG
Sbjct: 28 HVDIDDTTVSAGIEHSCAIHSVSAADFGGKVICWGSNSMGQAEAPDAEFIQVSSGRFHSCGVKLDETIECWG 99
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: H3GQG3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQG3_PHYRM) HSP 1 Score: 79.3 bits (194), Expect = 1.070e-13 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 136 DVDSISVAVGGRHTCALEYRPGVDFGGPVRCWGRDDYGQCSPSDEIFVQVSAGDRHTCGVKVDQTVSCWG 345
D+D S+A G H+CA++ + D GG V CWG ++ GQ SP F+QVS G H+CG+++D+T+ CWG
Sbjct: 35 DIDETSIAAGIEHSCAIQTQSYEDVGGRVVCWGVNNGGQSSPPPGDFIQVSTGRLHSCGIRIDETLECWG 104
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Match: K3WCY4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCY4_GLOUD) HSP 1 Score: 80.1 bits (196), Expect = 1.220e-13 Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 136 DVDSISVAVGGRHTCALEYRPGVDFGGPVRCWGRDDYGQCSPSDEIFVQVSAGDRHTCGVKVDQTVSCWG 345
D+D S+A G H+CA+ + D GG V CWG D+ GQ SP F+QVS G HTC +++D+T+ CWG
Sbjct: 6 DIDETSIAAGVEHSCAIYTKSYDDVGGRVLCWGLDNGGQSSPPPGQFIQVSTGRLHTCALRIDETIECWG 75 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig546.12919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig546.12919.1 >prot_H-paniculata_contig546.12919.1 ID=prot_H-paniculata_contig546.12919.1|Name=mRNA_H-paniculata_contig546.12919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=313bp MACILAITRLAVRIAARPIFAGDMRDPPPDSDMVFEELPEGFHNDVDSISback to top mRNA from alignment at H-paniculata_contig546:24366..34612- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig546.12919.1 ID=mRNA_H-paniculata_contig546.12919.1|Name=mRNA_H-paniculata_contig546.12919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10247bp|location=Sequence derived from alignment at H-paniculata_contig546:24366..34612- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig546:24366..34612- >mRNA_H-paniculata_contig546.12919.1 ID=mRNA_H-paniculata_contig546.12919.1|Name=mRNA_H-paniculata_contig546.12919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1878bp|location=Sequence derived from alignment at H-paniculata_contig546:24366..34612- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |