mRNA_H-paniculata_contig54516.12907.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig54516.12907.1
Unique NamemRNA_H-paniculata_contig54516.12907.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: A0A8F0F797_9PHAE (Preprotein translocase subunit secY n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F797_9PHAE)

HSP 1 Score: 568 bits (1464), Expect = 1.980e-201
Identity = 300/340 (88.24%), Postives = 319/340 (93.82%), Query Frame = 1
Query:    1 SNRPFRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTTVATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            ++RPFRQRFLLT+SLLTLVRIGSFIPLPYIDIKTFSPE G NNSTT +ATILNTFSGGGTSSVG+LSLGILPNINASIILQLLTQ++PSLLKLQKEEGEYGRRKLTDYTRYLTFFCAL+ESI TTYSFR+LIFNWN +VL QISLSLI GSMIILWFSE+ITKDGVGNGSSLLICFNIVSNFPDQIKAMALGL NTNSSII LLGGIFLLTT+GCICINEA+VKIPLVSASQLLRKLSKTSLWD+SNLPLRINQAGVMPLVFTSSVM+ILSS T LIY QL+N  +F  FNILSET LL++ PI YW TYSFLVFFFTSFYS ILLDPKDIAEQFRKNSV
Sbjct:    9 THRPFRQRFLLTMSLLTLVRIGSFIPLPYIDIKTFSPELGANNSTTAIATILNTFSGGGTSSVGLLSLGILPNINASIILQLLTQVSPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALVESIVTTYSFRSLIFNWNFIVLTQISLSLITGSMIILWFSEVITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLVNTNSSIILLLGGIFLLTTVGCICINEAIVKIPLVSASQLLRKLSKTSLWDSSNLPLRINQAGVMPLVFTSSVMIILSSATKLIYGQLLNTGRFSFFNILSETMLLQMVPIIYWTTYSFLVFFFTSFYSNILLDPKDIAEQFRKNSV 348          
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: A0A0R6LUW4_UNDPI (Protein translocase subunit SecY n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUW4_UNDPI)

HSP 1 Score: 495 bits (1275), Expect = 1.090e-172
Identity = 268/340 (78.82%), Postives = 293/340 (86.18%), Query Frame = 1
Query:    4 NRP-FRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTTVATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            N P FRQRF LTI LLTLVRIGSFIPLPYIDIKTFSP   +N STT VA+ILN+FSGG  +S  ILSLGILPNINASII+QLLT INP+LLKLQKEEGEYGRRKLTDYTRYLTFFCA+IESI TTYSFR LIFNWN+LVL+Q+SL+LIAGSMIILWFSELITKDG+GNGSS+LICFNIVSNFPDQ++AM L L+N N  I F +GGIFLLTT+GCI INEA+VKIPLVSASQLLR ++K SLW+NSNLPLR+NQAGVMPLVFTSSVMVILSS+ NLIY QLIN E F   N  S    L I  IFYW TY  LVFFFTSFYS ILLDPKD+ EQFRKNSV
Sbjct:    9 NTPSFRQRFFLTIGLLTLVRIGSFIPLPYIDIKTFSPLLESNTSTTAVASILNSFSGGENASFSILSLGILPNINASIIIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCAIIESIVTTYSFRPLIFNWNVLVLIQLSLTLIAGSMIILWFSELITKDGIGNGSSILICFNIVSNFPDQLRAMILALSNQNIIISFFIGGIFLLTTVGCIYINEAMVKIPLVSASQLLRNVNKFSLWNNSNLPLRVNQAGVMPLVFTSSVMVILSSLANLIYGQLINIELFSFLNSFSTNLTLGIGKIFYWSTYGILVFFFTSFYSTILLDPKDMTEQFRKNSV 348          
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: A0A8F0JZP1_9PHAE (Preprotein translocase subunit secY n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZP1_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 3.610e-171
Identity = 264/341 (77.42%), Postives = 294/341 (86.22%), Query Frame = 1
Query:    1 SNRP-FRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTTVATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            +N P FRQR LLTISLLT+VR+GSFIPLPYIDIKTFSP   TNNSTT VATILN+FSGG  SS  ILSLGILPNINASII+QLLT INP+LLKLQKEEGEYGRRK+TDYTRYLTF CA+IES+ T YSFR+LIFNWN LVL QISLSLIAGSMIILWFSELITKDG+GNG+S+LICFNIVSNFPDQIKAMAL LTN N  + FL+GGIFLLTTIGC+ INEA+V IPLVSASQLLRK SK +LW+ SNLPLR+NQ+GVMPLVFTSSVMV++SS++ L+Y QL+  E F   N LS    L +  IFYW  Y  LV+FFTSFYSKILLDPKDI+EQFRKNSV
Sbjct:    8 NNTPSFRQRCLLTISLLTIVRVGSFIPLPYIDIKTFSPLLETNNSTTAVATILNSFSGGQNSSFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESVVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIKAMALALTNQNILLSFLIGGIFLLTTIGCVYINEAMVNIPLVSASQLLRKPSKLTLWNISNLPLRVNQSGVMPLVFTSSVMVVVSSVSKLLYAQLVTVELFSSLNSLSANLTLGVGKIFYWSLYGILVYFFTSFYSKILLDPKDISEQFRKNSV 348          
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: D1J735_ECTSI (Protein translocase subunit SecY n=7 Tax=Ectocarpales TaxID=2877 RepID=D1J735_ECTSI)

HSP 1 Score: 473 bits (1216), Expect = 1.040e-163
Identity = 255/340 (75.00%), Postives = 286/340 (84.12%), Query Frame = 1
Query:    4 NRP-FRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTTVATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            N P F+QRF LT+ LLTLVRIGSFIPLPYID KTFSP    N STT VATILN+FSGGG +S  ILSLGILPNINASII+QLLT INP+LLKLQKEEGEYGRRKLTDYTRYLTFFC++I SI TTYSFR+LIFNWN+LVL QISL+L++GSMIILWFSELITK G+GNG+S+LICFNIVSNFPDQ+++M L L+  N  I   + GIFLLTTIGCI INEA+VKIPLVSASQLLR ++K SLW+ SNLPLR+NQAGVMPLVFTSSVMVILSS+T  +Y QL+N E F   N LS T  L I  +FYW  Y  LVFFFTSFYS ILLDPKD+ EQFRKNSV
Sbjct:   10 NTPSFKQRFFLTLGLLTLVRIGSFIPLPYIDTKTFSPLLEPNTSTTAVATILNSFSGGGNASFSILSLGILPNINASIIIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRSLIFNWNILVLTQISLTLMSGSMIILWFSELITKKGIGNGTSILICFNIVSNFPDQLRSMILVLSKQNIIISLFISGIFLLTTIGCIYINEAIVKIPLVSASQLLRNVNKFSLWNQSNLPLRVNQAGVMPLVFTSSVMVILSSLTTFLYGQLLNIEFFSFLNYLSTTLTLGIGKVFYWSAYGVLVFFFTSFYSTILLDPKDMTEQFRKNSV 349          
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: A0A141BSM4_9PHAE (Protein translocase subunit SecY n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM4_9PHAE)

HSP 1 Score: 471 bits (1213), Expect = 2.770e-163
Identity = 251/340 (73.82%), Postives = 286/340 (84.12%), Query Frame = 1
Query:    1 SNRPFRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTTVATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            +N  FRQRF LTISLLTLVRIGSFIPLPYIDI TFSP  G+NNSTT +ATILN FSGGG +S  ILSLGILPNINASI +QLLT INP+LLKLQK EGEYGRRKL DYTRYLTFF A+IE I TTYSFR+LIFNWN+LVL+QISLSLI G+MIILWFSELITK G+GNGSS+LICFNIVSNFPDQ++ +AL L+N +  I F +  IFLLTT+GCI INEA+VK+PLVSASQLLR ++K SLW+NSNLPLR+NQAGVMPLVFTSSVMV+L+SIT  +++Q IN + F  F   S   +L I  IFYW+ Y   VFFFTSFYS +LLDPKDI EQFRKNSV
Sbjct:    8 NNPSFRQRFFLTISLLTLVRIGSFIPLPYIDINTFSPLVGSNNSTTAIATILNNFSGGGNASFSILSLGILPNINASIFIQLLTTINPTLLKLQKNEGEYGRRKLIDYTRYLTFFFAVIEGIITTYSFRSLIFNWNILVLIQISLSLITGTMIILWFSELITKYGIGNGSSILICFNIVSNFPDQLRTIALNLSNKSIFIGFFVSSIFLLTTVGCIYINEAVVKVPLVSASQLLRNVNKFSLWNNSNLPLRVNQAGVMPLVFTSSVMVLLTSITKFLFSQFINIDFFSNFTFFSTNRILLIGKIFYWLLYGISVFFFTSFYSAVLLDPKDITEQFRKNSV 347          
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: D1GJR5_FUCVE (Protein translocase subunit SecY n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR5_FUCVE)

HSP 1 Score: 469 bits (1207), Expect = 2.340e-162
Identity = 257/340 (75.59%), Postives = 284/340 (83.53%), Query Frame = 1
Query:    1 SNRPFRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTTVATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            +N  FRQRF LTISLLTLVRIGSFIPLPYIDIKTFSP   +NNST  +A ILN FSGGG +S  I SLGILPNINASII+QLLT INP+LLKLQK+EGEYGRRKL DYTRYLTFFCA+IES+ TTYSF+ LIFNW+LLV  QI+LSLI G+MIILWFSELITK G+GNGSS+LICFNIVSNFPDQ+KAMA+GL+N N  I F +GGIFL+TTIGCI INEA+VKIPLVSASQLLR ++K SLW+NSNLPLR+NQAGVMPLVFTSSVMVIL+SIT L+  QLIN   F      S    L I  I YW  YS  VFFFTSFYS ILLDPKDI EQFRKNSV
Sbjct:    9 NNPSFRQRFFLTISLLTLVRIGSFIPLPYIDIKTFSPLLQSNNSTXXIAAILNNFSGGGNASFSIFSLGILPNINASIIIQLLTTINPTLLKLQKDEGEYGRRKLIDYTRYLTFFCAVIESLVTTYSFKPLIFNWDLLVFTQITLSLITGTMIILWFSELITKYGIGNGSSILICFNIVSNFPDQLKAMAVGLSNQNIFISFFVGGIFLVTTIGCIYINEAVVKIPLVSASQLLRNVNKFSLWNNSNLPLRVNQAGVMPLVFTSSVMVILTSITKLLSEQLINITFFSNLTNFSVNWTLIIGKICYWSIYSISVFFFTSFYSTILLDPKDITEQFRKNSV 348          
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: A0A2I4Q2J4_9PHAE (Protein translocase subunit SecY n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2J4_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 2.700e-161
Identity = 250/341 (73.31%), Postives = 289/341 (84.75%), Query Frame = 1
Query:    1 SNRPFRQRFLLTISLLTLVRIGSFIPLPYIDIKTFS-PEFGTNNSTTTVATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            S   FRQRFLLT+SLLTLVRIGSFIPLPYID+KT S P   + NS T V TILNTFSGGGTSS+ I SLGILPNINASII+QLLT ++P+LLKLQKEEGE+GRRKLTDYTRYLTFFCA++ESI TT+SFR LIF+WNLLV++QIS  LIAGSMIILWFSELITK+G+GNGSS+LICFNIVSNFPDQ+K++ L L N N  I   +G +FL TTIGCI INEA+VKIPL+SASQLLRK+SKTSLW+NS LPLR+NQAGVMPLVFTSS+MVILSS +  +Y +L N  KFF    +SE ++L     FYW+ +  LVFFFT+FYSKILLDPKDIAE+FRKNSV
Sbjct:    9 SPTSFRQRFLLTLSLLTLVRIGSFIPLPYIDLKTISSPILSSKNSATAVTTILNTFSGGGTSSISIFSLGILPNINASIIIQLLTTVSPTLLKLQKEEGEFGRRKLTDYTRYLTFFCAVLESIFTTFSFRELIFDWNLLVIVQISSFLIAGSMIILWFSELITKEGIGNGSSILICFNIVSNFPDQLKSLGLNLVNQNIVITSFIGSLFLFTTIGCIYINEAMVKIPLISASQLLRKVSKTSLWNNSYLPLRVNQAGVMPLVFTSSIMVILSSFSRFLYLELSN-NKFFSVLSISENSILLFGKFFYWLGFGLLVFFFTTFYSKILLDPKDIAEEFRKNSV 348          
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: A0A8E5XRJ3_9PHAE (Protein translocase subunit SecY n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ3_9PHAE)

HSP 1 Score: 460 bits (1183), Expect = 9.300e-159
Identity = 253/341 (74.19%), Postives = 289/341 (84.75%), Query Frame = 1
Query:    1 SNRPFRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTT-VATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            ++  F+QR LLTISLLTLVRIGSFIPLPYID+KTFS    + NS+TT VA ILN+FSGGGT+S  ILSLGILP INASII+QLLT INPSLLKLQK+EGEYGRRKLTDYTRYLTFFCA IES+ TTYSFR+LIFNWN   +LQISL+L+ GSMIILWFSELITK GVGNG+SLLICFNIVSNFP+Q+KAM + LTN N  I  LL  IFLLTT+GCI INEA V+IPL+SASQLL+KLSKTSLW+ SNLPLR+NQ+GVMPLVFTSSVMVILSS+T LIY Q++  + F     +S +  + I   FYWITY  LVFFFTSFYSK++LDPKDIAEQFRK+SV
Sbjct:    9 TSPSFQQRSLLTISLLTLVRIGSFIPLPYIDLKTFSTLLESKNSSTTAVAAILNSFSGGGTASFSILSLGILPYINASIIIQLLTTINPSLLKLQKDEGEYGRRKLTDYTRYLTFFCAAIESLLTTYSFRSLIFNWNFFSVLQISLTLVTGSMIILWFSELITKKGVGNGASLLICFNIVSNFPNQLKAMIVTLTNQNLLIAILLNVIFLLTTVGCIYINEATVRIPLISASQLLKKLSKTSLWNRSNLPLRVNQSGVMPLVFTSSVMVILSSLTKLIYGQVVTLQTFSFIETISGSFAINI---FYWITYGSLVFFFTSFYSKVILDPKDIAEQFRKSSV 346          
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: A0A8F0JZQ7_9PHAE (Preprotein translocase subunit secY n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZQ7_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 4.180e-158
Identity = 249/340 (73.24%), Postives = 279/340 (82.06%), Query Frame = 1
Query:    4 NRP-FRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTTVATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            N P FRQRF LTI LLTLVR+GSFIPLPYID KTFSP    N STT VA ILN FSGG  +S  ILSLGILPNINASI++QLLT INP+LLKLQKEEGEYGRRKLTDYTRYLTFFCA+IES+ T YSF+ LIFNWN+ +L+QIS +LIAGSMIILWFSELITK G+GNGSS+LICFNIVSNFPDQ++A+ L L+  N  I F + GIFLLTTIGCI INEA+VKIPLVSASQLLR ++K SLW +SNLPLR+NQAGVMPLVFTSSVMVI SS+  LIY QLI+ E F   + LS    + I   FYW TY  LVF FTSFYS ILLDPKD+ E+FRKNSV
Sbjct:    9 NTPSFRQRFFLTIGLLTLVRVGSFIPLPYIDTKTFSPLLEPNTSTTLVAGILNNFSGGSNASFSILSLGILPNINASILIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCAIIESVITAYSFQPLIFNWNVFILIQISSTLIAGSMIILWFSELITKAGIGNGSSILICFNIVSNFPDQLRAIILALSTQNILISFFIAGIFLLTTIGCIYINEAMVKIPLVSASQLLRNVNKLSLWSDSNLPLRVNQAGVMPLVFTSSVMVIFSSVAKLIYGQLISIEFFSFLSYLSTDLTIGIGKFFYWSTYGILVFGFTSFYSTILLDPKDMTEKFRKNSV 348          
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Match: A0A1I9LVB7_9PHAE (Protein translocase subunit SecY n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVB7_9PHAE)

HSP 1 Score: 446 bits (1146), Expect = 4.420e-153
Identity = 239/340 (70.29%), Postives = 277/340 (81.47%), Query Frame = 1
Query:    4 NRP-FRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTTVATILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAGSMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSIIFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPLRINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLKIAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV 1020
            N P F +RF LT+ LLTLVR GSFIPLPYID KTFSP    N STT VATILN+FSGGG +S  ILSLGILPNINASII+QL T INP+LLKLQKEEG YGRRKLTDYTRYLT FC+++ S+  TYSFR LIFNWN+LVL QISL+LIAGSMIILWFSELITK+G+GNG+S+LICFNIVSNFP Q++++ + L+  N +I  L+ GIFLLTT+GCI INEA+VKIPLV+A+QLLR ++   LW+ S LPLR+NQAGVMPLVFTSS+MVILSS T  +Y QL+N E F   N LS    L I  IFYW TY+ +VFFFTSFYS I LDPKD+ EQFRKNSV
Sbjct:   10 NTPSFGKRFFLTLGLLTLVRAGSFIPLPYIDTKTFSPLLEPNTSTTAVATILNSFSGGGNASFSILSLGILPNINASIIIQLFTTINPALLKLQKEEGGYGRRKLTDYTRYLTLFCSIVASVIATYSFRPLIFNWNILVLTQISLTLIAGSMIILWFSELITKNGIGNGTSILICFNIVSNFPAQLRSIIVVLSKQNIAITILISGIFLLTTVGCIYINEAIVKIPLVTATQLLRNINNFWLWNESILPLRVNQAGVMPLVFTSSIMVILSSFTTFLYGQLLNIELFSFLNYLSTNLTLGIGKIFYWFTYAVIVFFFTSFYSTIFLDPKDMTEQFRKNSV 349          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54516.12907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F797_9PHAE1.980e-20188.24Preprotein translocase subunit secY n=1 Tax=Protoh... [more]
A0A0R6LUW4_UNDPI1.090e-17278.82Protein translocase subunit SecY n=28 Tax=Laminari... [more]
A0A8F0JZP1_9PHAE3.610e-17177.42Preprotein translocase subunit secY n=1 Tax=Desmar... [more]
D1J735_ECTSI1.040e-16375.00Protein translocase subunit SecY n=7 Tax=Ectocarpa... [more]
A0A141BSM4_9PHAE2.770e-16373.82Protein translocase subunit SecY n=14 Tax=Sargassa... [more]
D1GJR5_FUCVE2.340e-16275.59Protein translocase subunit SecY n=3 Tax=Fucaceae ... [more]
A0A2I4Q2J4_9PHAE2.700e-16173.31Protein translocase subunit SecY n=1 Tax=Dictyopte... [more]
A0A8E5XRJ3_9PHAE9.300e-15974.19Protein translocase subunit SecY n=1 Tax=Ishige ok... [more]
A0A8F0JZQ7_9PHAE4.180e-15873.24Preprotein translocase subunit secY n=1 Tax=Chorda... [more]
A0A1I9LVB7_9PHAE4.420e-15370.29Protein translocase subunit SecY n=1 Tax=Pleurocla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54516contigH-paniculata_contig54516:119..1141 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score473.4
Seed ortholog evalue8.9e-131
Seed eggNOG ortholog2880.D1J735
Preferred namesecY
KEGG koko:K10956
KEGG TC3.A.5.4,3.A.5.8,3.A.5.9
KEGG Pathwayko03060,ko04141,ko04145,ko05110,map03060,map04141,map04145,map05110
KEGG ModuleM00401
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009668,GO:0009987,GO:0010027,GO:0016020,GO:0016043,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035,GO:0061024,GO:0071840
EggNOG free text desc.protein transport
EggNOG OGs2QSNV@2759,COG0201@1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044
Exons1
Model size1023
Cds size1023
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930564.6814246-CDS-H-paniculata_contig54516:118..11411622930564.6814246-CDS-H-paniculata_contig54516:118..1141Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54516 119..1141 -
1691481350.4153583-CDS-H-paniculata_contig54516:118..11411691481350.4153583-CDS-H-paniculata_contig54516:118..1141Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig54516 119..1141 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54516.12907.1prot_H-paniculata_contig54516.12907.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig54516 119..1141 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig54516.12907.1

>prot_H-paniculata_contig54516.12907.1 ID=prot_H-paniculata_contig54516.12907.1|Name=mRNA_H-paniculata_contig54516.12907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=341bp
SNRPFRQRFLLTISLLTLVRIGSFIPLPYIDIKTFSPEFGTNNSTTTVAT
ILNTFSGGGTSSVGILSLGILPNINASIILQLLTQINPSLLKLQKEEGEY
GRRKLTDYTRYLTFFCALIESIATTYSFRTLIFNWNLLVLLQISLSLIAG
SMIILWFSELITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLTNTNSSI
IFLLGGIFLLTTIGCICINEALVKIPLVSASQLLRKLSKTSLWDNSNLPL
RINQAGVMPLVFTSSVMVILSSITNLIYTQLINPEKFFLFNILSETTLLK
IAPIFYWITYSFLVFFFTSFYSKILLDPKDIAEQFRKNSV*
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mRNA from alignment at H-paniculata_contig54516:119..1141-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig54516.12907.1 ID=mRNA_H-paniculata_contig54516.12907.1|Name=mRNA_H-paniculata_contig54516.12907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1023bp|location=Sequence derived from alignment at H-paniculata_contig54516:119..1141- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAAATCGTCCATTTCGACAACGTTTTTTATTAACAATCAGTTTACTTAC TTTAGTAAGGATTGGAAGCTTTATACCTTTGCCATATATAGATATAAAAA CTTTTTCACCTGAATTTGGTACAAACAATTCAACAACAACTGTTGCGACA ATTTTAAATACTTTTTCCGGAGGGGGAACTTCTTCAGTTGGTATTTTAAG TCTTGGAATTTTACCGAATATAAATGCCTCAATTATACTTCAACTTTTAA CACAAATAAATCCTTCTCTTTTAAAACTTCAAAAAGAAGAAGGAGAATAC GGACGTCGTAAACTGACAGATTATACAAGATATTTAACATTTTTTTGTGC ATTGATAGAAAGTATTGCAACAACTTATAGTTTTCGTACTTTAATATTTA ATTGGAACTTGTTAGTTTTACTACAAATTAGTCTTTCCTTAATTGCTGGA TCAATGATTATATTATGGTTTAGTGAGTTAATTACTAAAGATGGTGTTGG AAATGGATCTTCATTACTAATTTGTTTCAATATTGTATCAAATTTTCCTG ATCAAATTAAGGCAATGGCATTGGGTTTAACAAATACTAATAGTTCTATT ATTTTTCTTTTAGGTGGAATTTTTTTATTAACAACAATTGGTTGTATTTG TATAAATGAAGCATTAGTTAAAATTCCATTAGTTTCTGCAAGTCAATTAT TAAGAAAACTAAGTAAAACTTCATTATGGGACAATAGTAATTTACCTTTA CGCATTAATCAAGCTGGCGTAATGCCATTAGTTTTTACTTCTTCCGTTAT GGTAATTTTATCATCGATTACTAATTTAATTTATACCCAATTAATCAATC CAGAGAAGTTTTTCCTTTTTAATATTCTTTCAGAAACGACACTATTAAAA ATAGCACCTATATTCTATTGGATAACATATAGTTTCTTAGTTTTTTTTTT CACATCATTTTATTCCAAAATACTTCTAGATCCTAAAGATATTGCAGAGC AATTTCGTAAAAATTCTGTTTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig54516:119..1141-

>mRNA_H-paniculata_contig54516.12907.1 ID=mRNA_H-paniculata_contig54516.12907.1|Name=mRNA_H-paniculata_contig54516.12907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2046bp|location=Sequence derived from alignment at H-paniculata_contig54516:119..1141- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAAATCGTCCATTTCGACAACGTTTTTTATTAACAATCAGTTTACTTAC
TTTAGTAAGGATTGGAAGCTTTATACCTTTGCCATATATAGATATAAAAA
CTTTTTCACCTGAATTTGGTACAAACAATTCAACAACAACTGTTGCGACA
ATTTTAAATACTTTTTCCGGAGGGGGAACTTCTTCAGTTGGTATTTTAAG
TCTTGGAATTTTACCGAATATAAATGCCTCAATTATACTTCAACTTTTAA
CACAAATAAATCCTTCTCTTTTAAAACTTCAAAAAGAAGAAGGAGAATAC
GGACGTCGTAAACTGACAGATTATACAAGATATTTAACATTTTTTTGTGC
ATTGATAGAAAGTATTGCAACAACTTATAGTTTTCGTACTTTAATATTTA
ATTGGAACTTGTTAGTTTTACTACAAATTAGTCTTTCCTTAATTGCTGGA
TCAATGATTATATTATGGTTTAGTGAGTTAATTACTAAAGATGGTGTTGG
AAATGGATCTTCATTACTAATTTGTTTCAATATTGTATCAAATTTTCCTG
ATCAAATTAAGGCAATGGCATTGGGTTTAACAAATACTAATAGTTCTATT
ATTTTTCTTTTAGGTGGAATTTTTTTATTAACAACAATTGGTTGTATTTG
TATAAATGAAGCATTAGTTAAAATTCCATTAGTTTCTGCAAGTCAATTAT
TAAGAAAACTAAGTAAAACTTCATTATGGGACAATAGTAATTTACCTTTA
CGCATTAATCAAGCTGGCGTAATGCCATTAGTTTTTACTTCTTCCGTTAT
GGTAATTTTATCATCGATTACTAATTTAATTTATACCCAATTAATCAATC
CAGAGAAGTTTTTCCTTTTTAATATTCTTTCAGAAACGACACTATTAAAA
ATAGCACCTATATTCTATTGGATAACATATAGTTTCTTAGTTTTTTTTTT
CACATCATTTTATTCCAAAATACTTCTAGATCCTAAAGATATTGCAGAGC
AATTTCGTAAAAATTCTGTTTAGTCAAATCGTCCATTTCGACAACGTTTT
TTATTAACAATCAGTTTACTTACTTTAGTAAGGATTGGAAGCTTTATACC
TTTGCCATATATAGATATAAAAACTTTTTCACCTGAATTTGGTACAAACA
ATTCAACAACAACTGTTGCGACAATTTTAAATACTTTTTCCGGAGGGGGA
ACTTCTTCAGTTGGTATTTTAAGTCTTGGAATTTTACCGAATATAAATGC
CTCAATTATACTTCAACTTTTAACACAAATAAATCCTTCTCTTTTAAAAC
TTCAAAAAGAAGAAGGAGAATACGGACGTCGTAAACTGACAGATTATACA
AGATATTTAACATTTTTTTGTGCATTGATAGAAAGTATTGCAACAACTTA
TAGTTTTCGTACTTTAATATTTAATTGGAACTTGTTAGTTTTACTACAAA
TTAGTCTTTCCTTAATTGCTGGATCAATGATTATATTATGGTTTAGTGAG
TTAATTACTAAAGATGGTGTTGGAAATGGATCTTCATTACTAATTTGTTT
CAATATTGTATCAAATTTTCCTGATCAAATTAAGGCAATGGCATTGGGTT
TAACAAATACTAATAGTTCTATTATTTTTCTTTTAGGTGGAATTTTTTTA
TTAACAACAATTGGTTGTATTTGTATAAATGAAGCATTAGTTAAAATTCC
ATTAGTTTCTGCAAGTCAATTATTAAGAAAACTAAGTAAAACTTCATTAT
GGGACAATAGTAATTTACCTTTACGCATTAATCAAGCTGGCGTAATGCCA
TTAGTTTTTACTTCTTCCGTTATGGTAATTTTATCATCGATTACTAATTT
AATTTATACCCAATTAATCAATCCAGAGAAGTTTTTCCTTTTTAATATTC
TTTCAGAAACGACACTATTAAAAATAGCACCTATATTCTATTGGATAACA
TATAGTTTCTTAGTTTTTTTTTTCACATCATTTTATTCCAAAATACTTCT
AGATCCTAAAGATATTGCAGAGCAATTTCGTAAAAATTCTGTTTAG
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