mRNA_H-paniculata_contig5451.12906.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5451.12906.1
Unique NamemRNA_H-paniculata_contig5451.12906.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: D7G334_ECTSI (Metallophos domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G334_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 5.970e-15
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 1 
Query:    1 DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKL 141
            D++SVVTSS  APLGPDPPGFRV RV+SRR+EHEYF +D+PP  + L
Sbjct:  284 DMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDL 330
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: A0A835ZFF7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 8.710e-9
Identity = 26/50 (52.00%), Postives = 33/50 (66.00%), Query Frame = 1 
Query:    1 DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKLEVD 150
            ++Q + TSS T PLGPDP G R+ RV+  R+EHEY AL   P  V LE +
Sbjct:  956 EMQHITTSSVTYPLGPDPVGLRLVRVFDDRIEHEYHALSEVPESVTLEAE 1005
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: X1IE94_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1IE94_9ZZZZ)

HSP 1 Score: 50.8 bits (120), Expect = 1.150e-6
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 1 
Query:    1 DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKL 141
            +L+ V TSS   PLG DP GFR+ +VY  R+EH+Y++    P +V L
Sbjct:   59 ELELVTTSSSGKPLGEDPIGFRIVKVYPDRIEHKYYSYKEMPKKVNL 105
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: A0A6M1ZW31_9BACT (3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZW31_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 1.240e-6
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 1 
Query:    4 LQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKLE 144
            ++ V TS+   P+G DP GFR+ +V+  R+EHEYF +D  P  V L+
Sbjct:  263 MEVVTTSALGKPIGKDPSGFRIVKVFEDRVEHEYFGIDEVPESVSLQ 309
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: A0A2E7LG52_9PLAN (Phosphoesterase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7LG52_9PLAN)

HSP 1 Score: 51.6 bits (122), Expect = 3.290e-6
Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 1 
Query:    1 DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKL 141
            +++ + +     PLG DP GFRV +VY   LEH+Y+ALD+ P +++L
Sbjct:  267 NVEMITSGPVGRPLGKDPSGFRVVKVYQDHLEHKYYALDAVPTQIQL 313
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: A0A7Z9F3M7_9CHLR (Metallophos domain-containing protein n=8 Tax=Chloroflexi TaxID=200795 RepID=A0A7Z9F3M7_9CHLR)

HSP 1 Score: 49.7 bits (117), Expect = 1.480e-5
Identity = 20/47 (42.55%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    1 DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKL 141
            D+  +++     PLG DP G R+ +VY  R+EHEYF +D  P  V+L
Sbjct:  222 DMLMIISGPVGYPLGDDPSGLRIVKVYDDRIEHEYFGMDDLPNTVEL 268
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: A0A5B9QPP1_9BACT (Serine/threonine-protein phosphatase CPPED1 n=1 Tax=Roseimaritima ulvae TaxID=980254 RepID=A0A5B9QPP1_9BACT)

HSP 1 Score: 49.7 bits (117), Expect = 1.550e-5
Identity = 20/47 (42.55%), Postives = 30/47 (63.83%), Query Frame = 1 
Query:    1 DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKL 141
            +++ V T     PLG DP GFR+ +VY   L+H+Y+AL+  P  V+L
Sbjct:  261 EMEMVTTGPVGKPLGKDPSGFRIVKVYESNLQHQYWALEDVPETVEL 307
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: A0A2E3MX72_9PLAN (Phosphoesterase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3MX72_9PLAN)

HSP 1 Score: 49.7 bits (117), Expect = 1.580e-5
Identity = 19/47 (40.43%), Postives = 31/47 (65.96%), Query Frame = 1 
Query:    1 DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKL 141
            +++ + +     PLG DP GFRV +VY  RLEH+Y+  D+ P +++L
Sbjct:  267 NVEMITSGPVGRPLGKDPSGFRVVKVYRDRLEHKYYPFDAVPTQIQL 313
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: A0A357YIP8_9PORP (Metallophosphatase n=1 Tax=Porphyromonadaceae bacterium TaxID=2049046 RepID=A0A357YIP8_9PORP)

HSP 1 Score: 48.9 bits (115), Expect = 2.810e-5
Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    1 DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKL 141
            +++ V+TSS   PLG DP G R+ +VY  ++ HEY+ LD  P  +  
Sbjct:  235 EIELVITSSLGKPLGDDPSGLRIIKVYEDKIMHEYYGLDCIPDSINF 281
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BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Match: A0A382CZ84_9ZZZZ (Metallophos domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382CZ84_9ZZZZ)

HSP 1 Score: 48.9 bits (115), Expect = 2.830e-5
Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 1 
Query:    1 DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKLE 144
            D++ + T     PLG DP GFR+ RVY   + H Y++LD  P EV ++
Sbjct:  236 DIKMITTGPVGKPLGDDPSGFRIVRVYPDSMRHLYYSLDEVPDEVNVD 283
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5451.12906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G334_ECTSI5.970e-1570.21Metallophos domain-containing protein n=1 Tax=Ecto... [more]
A0A835ZFF7_9STRA8.710e-952.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
X1IE94_9ZZZZ1.150e-646.81Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A6M1ZW31_9BACT1.240e-644.683',5'-cyclic adenosine monophosphate phosphodieste... [more]
A0A2E7LG52_9PLAN3.290e-642.55Phosphoesterase n=1 Tax=Planctomycetaceae bacteriu... [more]
A0A7Z9F3M7_9CHLR1.480e-542.55Metallophos domain-containing protein n=8 Tax=Chlo... [more]
A0A5B9QPP1_9BACT1.550e-542.55Serine/threonine-protein phosphatase CPPED1 n=1 Ta... [more]
A0A2E3MX72_9PLAN1.580e-540.43Phosphoesterase n=1 Tax=Planctomycetaceae bacteriu... [more]
A0A357YIP8_9PORP2.810e-540.43Metallophosphatase n=1 Tax=Porphyromonadaceae bact... [more]
A0A382CZ84_9ZZZZ2.830e-541.67Metallophos domain-containing protein n=1 Tax=mari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5451contigH-paniculata_contig5451:13688..13846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score77.4
Seed ortholog evalue2.2e-12
Seed eggNOG ortholog2880.D7G334
Preferred nameCPPED1
KEGG koko:K18914,ko:K21814,ko:K22390
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0009987,GO:0012505,GO:0016020,GO:0016192,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0035578,GO:0036230,GO:0042119,GO:0042582,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071944,GO:0097708,GO:0099503
EggNOG free text desc.acid phosphatase activity
EggNOG OGsCOG1409@1,KOG1378@2759
EC1.18.1.6,3.1.3.16
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03029
Exons1
Model size159
Cds size159
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930564.6248357-CDS-H-paniculata_contig5451:13687..138461622930564.6248357-CDS-H-paniculata_contig5451:13687..13846Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5451 13688..13846 +
1691481350.399108-CDS-H-paniculata_contig5451:13687..138461691481350.399108-CDS-H-paniculata_contig5451:13687..13846Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5451 13688..13846 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5451.12906.1prot_H-paniculata_contig5451.12906.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5451 13688..13846 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5451.12906.1

>prot_H-paniculata_contig5451.12906.1 ID=prot_H-paniculata_contig5451.12906.1|Name=mRNA_H-paniculata_contig5451.12906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
DLQSVVTSSCTAPLGPDPPGFRVFRVYSRRLEHEYFALDSPPAEVKLEVD
DD*
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mRNA from alignment at H-paniculata_contig5451:13688..13846+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5451.12906.1 ID=mRNA_H-paniculata_contig5451.12906.1|Name=mRNA_H-paniculata_contig5451.12906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=159bp|location=Sequence derived from alignment at H-paniculata_contig5451:13688..13846+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCTGCAAAGCGTCGTGACGAGCTCGTGCACAGCCCCTCTGGGCCCTGA
TCCTCCGGGGTTTCGAGTGTTCCGCGTTTATTCTCGGAGGCTAGAGCACG
AGTATTTTGCACTCGACAGCCCGCCAGCCGAAGTTAAACTTGAGGTGGAT
GATGACTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig5451:13688..13846+

>mRNA_H-paniculata_contig5451.12906.1 ID=mRNA_H-paniculata_contig5451.12906.1|Name=mRNA_H-paniculata_contig5451.12906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=318bp|location=Sequence derived from alignment at H-paniculata_contig5451:13688..13846+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCTGCAAAGCGTCGTGACGAGCTCGTGCACAGCCCCTCTGGGCCCTGA
TCCTCCGGGGTTTCGAGTGTTCCGCGTTTATTCTCGGAGGCTAGAGCACG
AGTATTTTGCACTCGACAGCCCGCCAGCCGAAGTTAAACTTGAGGTGGAT
GATGACTGAGACCTGCAAAGCGTCGTGACGAGCTCGTGCACAGCCCCTCT
GGGCCCTGATCCTCCGGGGTTTCGAGTGTTCCGCGTTTATTCTCGGAGGC
TAGAGCACGAGTATTTTGCACTCGACAGCCCGCCAGCCGAAGTTAAACTT
GAGGTGGATGATGACTGA
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