mRNA_H-paniculata_contig54407.12894.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: D7FKT5_ECTSI (Alpha-L-fucosidase, family GH95 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT5_ECTSI) HSP 1 Score: 113 bits (282), Expect = 9.570e-28 Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 1
Query: 16 SYYRASGWVAHANSDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYSR 165
SYYRA GWV+HAN+DRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEY+R
Sbjct: 867 SYYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 916
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: A0A6H5K8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P7_9PHAE) HSP 1 Score: 113 bits (282), Expect = 9.570e-28 Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 1
Query: 16 SYYRASGWVAHANSDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYSR 165
SYYRA GWV+HAN+DRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEY+R
Sbjct: 446 SYYRAGGWVSHANTDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYTR 495
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: A0A7S0QTJ0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTJ0_9CRYP) HSP 1 Score: 73.2 bits (178), Expect = 1.080e-13 Identity = 29/51 (56.86%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 13 CSYYRASGWVAHANSDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYSR 165
C Y GWVAH +D W GDA+WALCPTCGAW+ALHLWE + + R
Sbjct: 112 CLYGAPEGWVAHGFTDIWMNARPLGDAMWALCPTCGAWLALHLWERFAFRR 162
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: A0A7S1H9J3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H9J3_HEMAN) HSP 1 Score: 72.0 bits (175), Expect = 2.750e-13 Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 22 YRASGWVAHANSDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYSR 165
Y A GWVAH +D W G + GD W+LC TCGAWMALHLWE + ++R
Sbjct: 100 YGAKGWVAHGFTDIWMGASPLGDTAWSLCVTCGAWMALHLWERFRFTR 147
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: A0A7S3YGH4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGH4_HETAK) HSP 1 Score: 68.6 bits (166), Expect = 1.710e-12 Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 1
Query: 19 YYRASGWVAHANSDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEY 159
YYR GWVAH +D W H + W+LCPTCGAW AL LWEAY +
Sbjct: 86 YYRCPGWVAHGFTDLWAEGGLHSNIEWSLCPTCGAWAALALWEAYTH 132
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: A0A7S1MX31_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MX31_HEMAN) HSP 1 Score: 65.9 bits (159), Expect = 1.270e-11 Identity = 27/48 (56.25%), Postives = 32/48 (66.67%), Query Frame = 1
Query: 22 YRASGWVAHANSDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYSR 165
Y A GWVAH +D W T G + WALCPTCGAWMAL WE + ++R
Sbjct: 81 YGAKGWVAHGFTDIWMDTKPVGGSRWALCPTCGAWMALQQWENFRFTR 128
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: A0A494Y0I6_9BACL (Glycoside hydrolase family 95 protein n=1 Tax=Cohnella endophytica TaxID=2419778 RepID=A0A494Y0I6_9BACL) HSP 1 Score: 67.0 bits (162), Expect = 1.660e-11 Identity = 30/54 (55.56%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 19 YYRASGWVAHANSDRWGGTA-----AHGDAVWALCPTCGAWMALHLWEAYEYSR 165
+Y A GW AH N+D WG TA HGDAVWAL P G W+A HLWE Y + R
Sbjct: 404 HYGAQGWTAHHNTDIWGHTAPVGDYGHGDAVWALWPMGGPWVAQHLWEHYAFGR 457
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: A0A328TSL9_9BACL (Glycoside hydrolase family 95 protein n=1 Tax=Paenibacillus montanisoli TaxID=2081970 RepID=A0A328TSL9_9BACL) HSP 1 Score: 63.9 bits (154), Expect = 2.020e-10 Identity = 29/54 (53.70%), Postives = 33/54 (61.11%), Query Frame = 1
Query: 19 YYRASGWVAHANSDRWGGTA-----AHGDAVWALCPTCGAWMALHLWEAYEYSR 165
+Y A GW AH N+D WG TA GDAVWAL P G W+A HLWE Y + R
Sbjct: 405 HYGARGWTAHHNTDIWGHTAPVGDFGQGDAVWALWPMGGPWLAQHLWEHYAFGR 458
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: UPI001B001488 (Glycoside hydrolase family 95 protein n=1 Tax=Novosphingobium sp. TaxID=1874826 RepID=UPI001B001488) HSP 1 Score: 62.8 bits (151), Expect = 5.160e-10 Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 22 YRASGWVAHANSDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYSRYP 171
Y A GWVAH N+D W TA A + L PT GAW+ +HLW+ Y+YSR P
Sbjct: 431 YGARGWVAHHNTDLWRATAPIDGAQFGLWPTGGAWLCVHLWDHYDYSRDP 480
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Match: UPI0019349962 (glycoside hydrolase N-terminal domain-containing protein n=1 Tax=Steroidobacter gossypii TaxID=2805490 RepID=UPI0019349962) HSP 1 Score: 62.8 bits (151), Expect = 5.170e-10 Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 1
Query: 22 YRASGWVAHANSDRWGGTAAHGDAVWALCPTCGAWMALHLWEAYEYSR 165
Y A GWV H N+D W TA W + PT GAW+ LHLW+ Y+YSR
Sbjct: 462 YDARGWVTHHNTDLWRATAPIDGTKWGMWPTGGAWLCLHLWDRYDYSR 509 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54407.12894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig54407.12894.1 >prot_H-paniculata_contig54407.12894.1 ID=prot_H-paniculata_contig54407.12894.1|Name=mRNA_H-paniculata_contig54407.12894.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp ADFPCSYYRASGWVAHANSDRWGGTAAHGDAVWALCPTCGAWMALHLWEAback to top mRNA from alignment at H-paniculata_contig54407:470..649- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig54407.12894.1 ID=mRNA_H-paniculata_contig54407.12894.1|Name=mRNA_H-paniculata_contig54407.12894.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=180bp|location=Sequence derived from alignment at H-paniculata_contig54407:470..649- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig54407:470..649- >mRNA_H-paniculata_contig54407.12894.1 ID=mRNA_H-paniculata_contig54407.12894.1|Name=mRNA_H-paniculata_contig54407.12894.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=360bp|location=Sequence derived from alignment at H-paniculata_contig54407:470..649- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |