mRNA_H-paniculata_contig5416.12862.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: D7G2J8_ECTSI (AMP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2J8_ECTSI) HSP 1 Score: 366 bits (939), Expect = 1.390e-120 Identity = 189/290 (65.17%), Postives = 227/290 (78.28%), Query Frame = 1
Query: 4 MQSVVRTGARVSTAAARACLRQRNHHAPATAAASRNGVQQAITPTT---------LIAQSRFMGGIAAKLDEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLPECSEKHVAQLAAARVGMVVAEVDQQLTSPEAIGKVLEECGATVALVDDAGIPALTEAIPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSVLLYTPPISPLDGVNGQIKETTPLYTNFSAGSGGSPQKGDTLSHADVVRSAAWPTISAILDKNYIEV 846
MQS+ R R + A CLR RN A+ SR G A+ T L Q RF+GG+A+K+D+V AE+PMKEAVRYKKGNLKWTRSDVK HSEALACGLLELGCKAGDT+AMWLPECSEKHVAQLAAAR+GMVVAEVD +L S A+ K+LEE GA V LV+++ +P+L EA+PELRHY T SGLPFRSAKLPSLRLC+HTG++RE ++L++RS LLYTPP+SPL VNGQIKE+ PL+T FS G+GG+P+KG TLSHA+VV A+WPTI+AIL K Y+EV
Sbjct: 1 MQSLARATGRAAEHAG--CLRPRN-----VASLSRRGAAVALKAATAAAAAGDMPLTTQGRFLGGLASKVDKVLAEIPMKEAVRYKKGNLKWTRSDVKSHSEALACGLLELGCKAGDTMAMWLPECSEKHVAQLAAARIGMVVAEVDPKLGSAAAVEKILEESGAAVVLVEESVVPSLIEAVPELRHYSTDSGLPFRSAKLPSLRLCIHTGLEREAALLHFRSALLYTPPVSPLAQVNGQIKESAPLHTIFSEGTGGTPEKGKTLSHAEVVSLASWPTIAAILKKEYVEV 283
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: A0A7S3XZ81_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ81_HETAK) HSP 1 Score: 188 bits (478), Expect = 5.520e-52 Identity = 101/236 (42.80%), Postives = 143/236 (60.59%), Query Frame = 1
Query: 157 RFMGGIAAKLDEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLPECSEKHVAQLAAARVGMVVAEVDQQLTSPEAIGKVLEECGATVALVDDAGIPA------LTEAIPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSVLLYTPPISPLDGVN-GQIKETTPLYTNFSAGSGGSPQKGDTLSHADVVRSAAWPTISAILDKNYIE 843
R + IA++++ AE KEAVRY N+KWTR DV+ ++ALA GLLE C GD+IA+WLPECSEKHV QLAAA+ G+V A+ D + +PEA+G L + GA V L+ ++ + A L +AIPEL Y +G PF S+ P+L+L +HTG D N++ + + P GV +K+ TPLY ++ SGG KG+ ++H + S W + +ILDK YIE
Sbjct: 45 RSLASIASQINSAVAENEYKEAVRYTHKNIKWTRKDVQFQTDALANGLLEAACNPGDSIAVWLPECSEKHVTQLAAAKAGLVFADFDLSIDTPEALGDALADSGAKV-LIFNSELDAVNCGRVLFDAIPELSGYYNNTGAPFHSSSFPNLKLMIHTGYDSLAGFHNFKHLPVPHPATGGKLGVILPHLKDDTPLYVKYTKDSGGKATKGEVMTHGTALSSKEWSVVKSILDKQYIE 279
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: A0A7S2XZH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZH5_9STRA) HSP 1 Score: 182 bits (463), Expect = 6.390e-50 Identity = 102/231 (44.16%), Postives = 143/231 (61.90%), Query Frame = 1
Query: 172 IAAKLDEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLPECS-EKHVAQLAAARVGMVVAEVDQQLTSPEAIGKVLEECGATVALVDDAG-----IPALTEAIPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSVLLYTPPISPLDGVNGQIKETTPLYTNFSAGSGGSPQKGDTLSHADVVRSAAWPTISAILDKNYIEV 846
IAA+L +VT PMKEAVRY+ N K TR D+ +S AL+ GLLEL DT+ +WLP+ S EKHVA LAAA++G+ VA+V Q + PEAI +VL + GA + ++D + AL +A+PEL H+ G+PF S LP LR+ HTG D N++ VL++ P S + + +K+ TPLYT ++ G G KG+TL++ V+ +AW SAIL Y+EV
Sbjct: 32 IAAQLKDVTDANPMKEAVRYQDKNFKCTREDIDAYSYALSNGLLELCVAPNDTMVLWLPDDSAEKHVAMLAAAKMGVTVADVSQDVQKPEAIRQVLSDTGARMIMIDTEHPDYNYLHALVKAVPELLHFNDKHGVPFHSHTLPKLRMFFHTGYDVIKGFCNFKHVLMFNPGESQVPKILPFLKDDTPLYTPYTKGPDGMAVKGETLTNGQVLSHSAWKVHSAILGGQYVEV 262
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: A0A4D9D3L0_9STRA (AMP-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3L0_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.070e-43 Identity = 98/243 (40.33%), Postives = 139/243 (57.20%), Query Frame = 1
Query: 142 LIAQS-RFMGGIAAKLDEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLPEC-SEKHVAQLAAARVGMVVAEVDQQLTSPEAIGKVLEECGATVALV----DDAGIPALTEA-IPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSVLL-YTPPISPLDGVNGQIKETTPLYTNFSAGSGGSPQKGDTLSHADVVRSAAWPTISAILDKNYIEV 846
L+ QS R M + A LDE+T E+P+KEA++Y KG KWTR+D+K ++ LA G L+LG K GDTIA W+PE ++ HV Q AA+ G+ +A +D + S E + K L E A + + AL ++ IPEL Y G G+PFRS K P L+ VHTG D + N + + L P SPL + + ++TPL+ +A +G LSHADV+ AWP +S +L K + V
Sbjct: 15 LLQQSVRSMASVGALLDEITFEIPLKEALQYTKGKEKWTRADIKLAADGLAAGFLDLGLKPGDTIAAWIPEDDADLHVTQFGAAKAGITLAILDWNI-SKEGLEKTLLETNARALIYAPYRGHTDLTALLQSVIPELASYDDGLGVPFRSRKFPHLKYLVHTGFDIIQGVENLKHIFLPLEPERSPLPAIQALVSDSTPLFLPVTADG----SRGAMLSHADVLSKNAWPVVSGVLSKKLVNV 252
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: A0A7S2CY20_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY20_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.920e-33 Identity = 87/250 (34.80%), Postives = 136/250 (54.40%), Query Frame = 1
Query: 133 PTTLIAQSRFMGGIAAKLDEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLP-ECSEKHVAQLAAARVGMVVAEVDQQLTSPEAIGKVLEECGATVALVD-DAG----IPALTEAIPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSVLLYTPP---ISPLDGVNGQIKETTPLYTNFSAGSGGSPQKGDTLSHA------DVVRSAAWPTISAILDKNY 837
P + A F GI KL + PM E V++ K NLKW+ +DVK++S+A + GL++ G KAGD++A+WLP + +E + AAAR+G+++ E+D ++ +AI +L E + D +AG L E +PEL+HY G FRS +PS++ +H +D P + N++ ++Y P I P ++ PL N+++ DTLS A DV+ AWPT+ AILDK +
Sbjct: 27 PPHVAAARSFSVGIQEKLATLVDAHPMMETVQFNKQNLKWSMADVKRYSDAFSSGLVDNGWKAGDSLAVWLPADTAESLTVKFAAARIGLLLVEIDMSVSEADAIRSILVENNCKGLIYDLEAGDRHNTDILKEIMPELKHYDDKFGDQFRSRVVPSMKFIMHVNMDLIPGVGNFKYQMVYDPRPALIPPAPDLSA------PLTVNYTS---------DTLSGARVLSQEDVMTEQAWPTVGAILDKKF 261
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: A0A7S2WCA9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCA9_9STRA) HSP 1 Score: 133 bits (335), Expect = 6.890e-32 Identity = 77/227 (33.92%), Postives = 126/227 (55.51%), Query Frame = 1
Query: 172 IAAKLDEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLP-ECSEKHVAQLAAARVGMVVAEVDQQLTSPEAIGKVLEECGATVALVDDA-----GIPALTEAIPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSVLLYTPPISPLDGVNGQIKETTPLYTNFSAGSGGSPQKGDTLSHADVVRSAAWPTISAILDKN 834
I+ L + +LP+KEA+ +K N+KW+ D+K+HS+ALA GLLELG ++GD +A+W+ +C E+ V + A++R G+ + E+D ++ PE++ K+L E A + D + A+PEL + G FRS +PS+ L HTG+D P ++N + +L Y P S + +K+ S GSGG +L + ++SA W +S IL +
Sbjct: 31 ISQNLAQRCEDLPLKEAIAFKVNNVKWSYQDLKEHSDALAAGLLELGWRSGDVLAVWVESDCQEQIVTRFASSRAGLGLVEIDAGVSDPESLRKILNETNAKGLVFDPVMGDRYNQDIVEAALPELASFDDRFGGRFRSRAVPSIGLVAHTGMDLVPGVVNLKHLLAYDAPESRFNSTTSGMKQVV------SYGSGGG---ATSLKEDEALQSAPWNLVSGILRQE 248
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: A0A2D4BQ85_PYTIN (AMP-binding domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQ85_PYTIN) HSP 1 Score: 114 bits (285), Expect = 1.870e-24 Identity = 71/235 (30.21%), Postives = 127/235 (54.04%), Query Frame = 1
Query: 112 GVQQAITPTTLIAQ-SRFMGGIAAKLDEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLPECSEKHVAQLAAARVGMVVAEVDQQLTSPEAIGKVLEECGATVALVDD--AG---IPALTEAIPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSVLLYTPPISPLDGVNGQIKETTPLYTNFSAGSGGSPQKGDTLSHADVVRSA 798
G+ +A+T +A +R + LDE LP KEA R K +L+W+ ++ + +A GL L + GD +A+WLP +E V LAAA+ G+ +A +D +++S E + VL + A+ L + AG ++E PEL Y++ + FR + +L + T D E ++ +R +++ +P + + + E TPL ++ +G +P+KG+TL+HAD+++ A
Sbjct: 9 GLARAVTGRVNVALGARAASTVGGALDEAVERLPHKEAFRSIKQDLRWSYKELDSFVQQVANGLNSLHFQPGDVLAVWLPNNAENLVTHLAAAKAGLXLAVIDPEISSAEEVAFVLHDSKASGILYEPKIAGRNNSAVVSELFPELATYESRXEV-FRPKQFRNLHAVISTNTDYEQGVIPFREIMVNSPEPYTVAAMKKAVNEKTPLAVTYNRVAGQTPKKGETLTHADILKRA 242
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: G5A2G9_PHYSP (AMP-binding domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5A2G9_PHYSP) HSP 1 Score: 95.5 bits (236), Expect = 5.260e-18 Identity = 60/220 (27.27%), Postives = 110/220 (50.00%), Query Frame = 1
Query: 154 SRFMGGIAAKLDEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLPECSEKHVAQLAAARVGMVVAEVDQQLTSPEAIGKVLEECGATVALVD--DAG---IPALTEAIPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSVLLYTPPISPLDGVNGQIKETTPLYTNFSAGSGGSPQKGDTLSHADVVRSA 798
+R + A LDE A LP KEA+R K +++W+ ++ + LA G L+L +AGD +A+WLP +E + QLAAAR G+ +A ++ +++ E + +L + A + + AG + PEL ++ + FR + L + T + ++N +++ + V + + TPL +S G +P+K L+H D+++ A
Sbjct: 17 ARAASTVGAALDEAVARLPHKEALRSVKQDVRWSFKELNAAVDELASGFLDLQFRAGDVVALWLPNSAENVLTQLAAARAGLTLAVIEPEVSQAEELAFILHDSQAAGLVFEPKQAGRNQTEIVQGLFPELATFRERMEV-FRPKQFRHLHSVITTSWEPVEGMINLNGMMVNNAEPYAMKAVTKTLSDKTPLAVTYSKVEGQNPKKSAVLTHGDLLKRA 235
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: UPI001FF5FBB5 (AMP-binding protein n=1 Tax=Sphingobium sp. MAH-33 TaxID=2933566 RepID=UPI001FF5FBB5) HSP 1 Score: 94.4 bits (233), Expect = 1.090e-16 Identity = 65/215 (30.23%), Postives = 108/215 (50.23%), Query Frame = 1
Query: 172 IAAKLDEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLPECSEKHVAQLAAARVGMVVAEVDQQLTSPE---AIGKVLEECGATVALVDDAGIPALTEAIPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSV--LLYTPPISPLDGVNGQIKETTPLYTNFSAGSGGSPQKGDTLSHADVVRSAA 801
I LD P K+A+ + GN++++ S++K ++ A GLL LG K GD + +W P C+E +AQLA AR GM++ ++ E +GKV A ++ A+TE+ + H+ G S LP+ R + G + P L++ V L + L + +K P+ F++G+ G+P KG TLSH +++ +AA
Sbjct: 22 IGEALDRAAQRWPDKDALVARHGNIRYSWSELKAATDDFAAGLLALGVKPGDRVGIWAPNCAEWTIAQLATARAGMILVNINPAYRVAELEYTLGKVEVRALICAASFKNSDYLAMTESF--VTHFGEQPG-EIVSVDLPAFRYAIKIGGEPRPGWLDFSEVAGLRTAASETELASIAATLKADDPINIQFTSGTTGAP-KGVTLSHRNILNNAA 232
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Match: A0A7X0H2B5_9SPHN (Fatty-acyl-CoA synthase n=2 Tax=unclassified Sphingopyxis TaxID=2614943 RepID=A0A7X0H2B5_9SPHN) HSP 1 Score: 85.5 bits (210), Expect = 7.350e-14 Identity = 63/211 (29.86%), Postives = 104/211 (49.29%), Query Frame = 1
Query: 187 DEVTAELPMKEAVRYKKGNLKWTRSDVKKHSEALACGLLELGCKAGDTIAMWLPECSEKHVAQLAAARVGMVVAEVDQQLTSPEAIGKVLEECGATVALVDDAG-----IPALTEAIPELRHYKTGSGLPFRSAKLPSLRLCVHTGVDREPSILNYRSVLLYTPPISPLDGVNGQIKETTPLYTNFSAGSGGSPQKGDTLSHADVVRSAAW 804
D A P EA+ + +++W+ ++K +A+A GLLE G K GD + +W P C+E V QLA A+ G+++ ++ E + L + G T ++ + I L E PEL G R+A+LP LRL + G L + + L + PL V ++ P+ F++G+ G P KG TLSH +++ + A+
Sbjct: 24 DRTVARHPDSEALVVRHQSVRWSWRELKARVDAVAAGLLERGLKPGDRVGIWAPNCAEWVVVQLATAKAGLILVNINPAYRVAE-LDYALNKVGCTALILAPSHKSSDYIAMLGELAPELPTSTPGM---LRAARLPDLRLVIALGGRDHAGCLPFDA--LASADTGPLADV--RLDPAMPVNIQFTSGTTGFP-KGATLSHRNILNNGAF 225 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5416.12862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5416.12862.1 >prot_H-paniculata_contig5416.12862.1 ID=prot_H-paniculata_contig5416.12862.1|Name=mRNA_H-paniculata_contig5416.12862.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp MQSVVRTGARVSTAAARACLRQRNHHAPATAAASRNGVQQAITPTTLIAQback to top mRNA from alignment at H-paniculata_contig5416:777..9311- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5416.12862.1 ID=mRNA_H-paniculata_contig5416.12862.1|Name=mRNA_H-paniculata_contig5416.12862.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8535bp|location=Sequence derived from alignment at H-paniculata_contig5416:777..9311- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5416:777..9311- >mRNA_H-paniculata_contig5416.12862.1 ID=mRNA_H-paniculata_contig5416.12862.1|Name=mRNA_H-paniculata_contig5416.12862.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at H-paniculata_contig5416:777..9311- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |