mRNA_H-paniculata_contig541.12851.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig541.12851.1
Unique NamemRNA_H-paniculata_contig541.12851.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: D7FL76_ECTSI (Tropinone reductase, putative / tropine dehydrogenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL76_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 3.000e-93
Identity = 147/206 (71.36%), Postives = 163/206 (79.13%), Query Frame = 1 
Query:    1 KGIGKAIVEELTSLGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGKLDILVNNVGTSIRRATVDYTPEEFKQVMDTNFNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPVAADAVR 618
            KGIGKAIVEEL  LGA V+TCSR   D+ ACL+EWK KG  V GT ADVTT EGR+ ++ LA + F G LDILVNNVGT+IR+ATVDYTPEE   VMDTNF SLFLLT+L +PLLK AAA  G+RE GGSSV+NISSVAG+T IKSG          PYAASKAAMNQVT+ WGCEWA DGIRVNAVAPWYTKTPLT+PV AD VR
Sbjct:   59 KGIGKAIVEELACLGAKVITCSRNPADVAACLEEWKSKGLLVEGTAADVTTAEGRESLVKLAEEHFGGLLDILVNNVGTNIRKATVDYTPEELAYVMDTNFTSLFLLTKLLHPLLKAAAAVKGSRENGGSSVINISSVAGITPIKSGS---------PYAASKAAMNQVTRLWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADPVR 255
[Close]
BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: D7FL79_ECTSI (Tropinone reductase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL79_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 1.350e-73
Identity = 122/201 (60.70%), Postives = 152/201 (75.62%), Query Frame = 1 
Query:    1 KGIGKAIVEELTSLGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGKLDILVNNVGTSIRRA-TVDYTPEEFKQVMDTNFNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPV 600
            KGIGKAIVEEL  LGA VLTCSRT   + AC+ EW+ KG  V G   DVTT EGR ++ + A + FDG LDILVNNVG SIR++ T D+TPEEF+ +++TNF+++  LT+L +PLLK AAAA+GAR+ GGSSVVNISS+AG+T++K+G           YAASKAA+N++T NWGCEWA DGIRVNAVAP  T TP T+ V
Sbjct:   26 KGIGKAIVEELACLGAKVLTCSRTEDGVIACITEWRAKGLEVHGIAVDVTTAEGRQELFSAAEEHFDGALDILVNNVGRSIRKSSTFDFTPEEFETIINTNFSTVLSLTKLFHPLLKAAAAAEGARDKGGSSVVNISSIAGVTAVKTGA---------AYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESV 217
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BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: A0A835YM08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM08_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.430e-69
Identity = 119/206 (57.77%), Postives = 140/206 (67.96%), Query Frame = 1 
Query:    1 KGIGKAIVEELTSLGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGKLDILVNNVGTSIRRATVDYTPEEFKQVMDTNFNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPVAADAVR 618
            KGIG AIV EL  LGA V TC+R+  D++ CL EW+ +G  V G+ ADV++ E R  +L    + F G LDILVNNVGTSIRRATVDYT EE + V+  NF+S F + QL +PLLK A         GG SVVNI SVAG+TSIKSG         TPYAASKAAM++VTQN  CEWA DGIRVN VAPWYT TPL  PV  D ++
Sbjct:   19 KGIGNAIVVELAHLGAEVYTCARSDADLQQCLAEWRAQGLKVHGSVADVSSAEDRAALLQKVGEAFGGSLDILVNNVGTSIRRATVDYTSEEAEHVLRVNFHSCFAMMQLCHPLLKEA--------QGGGSVVNIGSVAGVTSIKSG---------TPYAASKAAMHKVTQNCACEWAGDGIRVNCVAPWYTNTPLASPVFEDKIK 207
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BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: A0A6H5JMS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS4_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 5.590e-63
Identity = 122/249 (49.00%), Postives = 151/249 (60.64%), Query Frame = 1 
Query:    1 KGIGKAIVEELTSLGASVLTCSRTSTDMEACL-------------------------KEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGKLDILVNNVGTSIRRA-TVDYTPEEFKQVMDTNFNSLFLLTQ-----------------------LAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPV 600
            +GIGKAIVEEL  LGA VLTCSRT   + AC+                         +EW+ KG  V G   DVTT EGR ++ + A + FDG LDILVNNVG SIR++ T DYTPEEF+ ++DTNF+++  LT+                       L +PLLK AAAA+GAR  GGSSVVNISS+AG+ ++K+G           YAASKAA+N++T NWGCEWA DGIRVNAVAP  T TP T+ V
Sbjct:   15 RGIGKAIVEELACLGAKVLTCSRTEDGVTACITGCLCVVLRDLSSRAFAVVLCLWLQQEWRAKGLEVYGIAVDVTTAEGRQELYSAAEERFDGALDILVNNVGRSIRKSSTFDYTPEEFETIIDTNFSTVLSLTKARLYVFTLICLGRFASLIPCSVFLFHPLLKAAAAAEGARAKGGSSVVNISSIAGVIAVKTGA---------AYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESV 254
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BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: B7G5W5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5W5_PHATC)

HSP 1 Score: 198 bits (504), Expect = 2.610e-60
Identity = 110/202 (54.46%), Postives = 136/202 (67.33%), Query Frame = 1 
Query:    1 KGIGKAIVEELTS-LGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGK-LDILVNNVGTSIRRATVDYTPEEFKQVMDTNFNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPV 600
            KGIG A+VEEL   LG  VLTC+R   D++ CLK+WKE GF+  G  ADV TVEGR ++L        G+ LDILVNNVGT+IR+A+++YT E+ + V  TNF S+F LT   +PLLK +A   G R    SSVVNI SVAG+T +KSG         TPYA++KAAMNQ+T NW CEW  DGIRVN V PWY +T L + V
Sbjct:   17 KGIGLAVVEELAGQLGCQVLTCARNEKDLDICLKKWKECGFDCTGVVADVATVEGRHELLESIRIWLQGRPLDILVNNVGTNIRKASIEYTMEDLQLVWRTNFESMFALTTACHPLLKRSA---GTRT---SSVVNIGSVAGVTCMKSG---------TPYASTKAAMNQITGNWACEWGLDGIRVNCVTPWYIRTELAEQV 203
[Close]
BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: A0A8J9SFR7_9CHLO (Tropinone reductase homolog At5g06060 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SFR7_9CHLO)

HSP 1 Score: 198 bits (503), Expect = 3.180e-60
Identity = 109/207 (52.66%), Postives = 143/207 (69.08%), Query Frame = 1 
Query:    1 KGIGKAIVEELTSLGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGKLDILVNNVGTSIRRATVDYTPEEFKQVMDTNFNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAG-LTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPVAADAVR 618
            KGIGKAIVEEL SLGA VLTC+RT++D++   K W+EKG+   G  AD++T+EGR +++   SK F G L ILVNNVG+++R+ TV+YT E++  +M TN  S + LTQLA+PLLK A           SS+V ISSVAG  T+++SG         T YA +KAAM+Q+T+N  CEWA+DGIRVN+V PWY  TPL  PV  D V+
Sbjct:   24 KGIGKAIVEELASLGAEVLTCARTASDLDLSNKIWQEKGWRAHGIPADLSTLEGRQQLIAEVSKRFGGDLHILVNNVGSNLRKPTVEYTSEDYNLIMKTNLESAYNLTQLAHPLLKAATC---------SSIVMISSVAGGPTTVQSG---------TIYAMTKAAMDQLTKNLSCEWASDGIRVNSVKPWYIDTPLAAPVINDPVK 212
[Close]
BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: I3RZU7_LOTJA (Uncharacterized protein n=2 Tax=Lotus japonicus TaxID=34305 RepID=I3RZU7_LOTJA)

HSP 1 Score: 195 bits (495), Expect = 6.530e-59
Identity = 102/203 (50.25%), Postives = 136/203 (67.00%), Query Frame = 1 
Query:    1 KGIGKAIVEELTSLGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGKLDILVNNVGTSIRRATVDYTPEEFKQVMDTNFNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPVAAD 609
            +GIG A+VEEL   GA+V TCSR   ++ ACLKEW+EKGF+V G+  D ++   R+K+  L +  F+GKL+ILVNNVGT+IR+ T++YT EE+ ++M TN +S   L+QLAYPLLK +         G  S+V ISSVA L  + SG           YAASKAA+NQ+T+   CEWA   IR N+VAPWYTKT L +PV ++
Sbjct:   27 RGIGHAVVEELAEFGATVYTCSRNEVELNACLKEWQEKGFSVSGSVCDASSPPQREKLFELVASAFNGKLNILVNNVGTNIRKPTIEYTAEEYSKLMSTNLDSAHHLSQLAYPLLKAS---------GNGSIVFISSVAALAHVGSGA---------VYAASKAAINQLTKYLACEWAKGNIRSNSVAPWYTKTSLVEPVLSN 211
[Close]
BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: A0A7J7P982_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7P982_9MAGN)

HSP 1 Score: 194 bits (493), Expect = 1.030e-58
Identity = 98/198 (49.49%), Postives = 137/198 (69.19%), Query Frame = 1 
Query:    1 KGIGKAIVEELTSLGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGKLDILVNNVGTSIRRATVDYTPEEFKQVMDTNFNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQ 594
            +GIG A+VEEL  LGA + TCSR   ++  CL++WK+KGF V G+  DV + E R+K++++ S TF+G L+IL+NNVGT++R+ T+DYT EEF  +M TNF+S++ L QLA+PLLK          +G  S+V ISSVAG+ ++ SG         T YAA+K A+NQ+T+N  CEWA D IR N+VAPWY +T L +
Sbjct:   22 RGIGSAVVEELAELGAIIHTCSRNEAELNGCLEDWKKKGFKVSGSVCDVLSREARNKLMDIVSHTFNGNLNILINNVGTNVRKPTLDYTSEEFSLIMATNFDSVYHLCQLAHPLLK---------SSGMGSIVFISSVAGVVALPSG---------TVYAATKGAINQITKNLACEWAKDNIRSNSVAPWYIRTSLVK 201
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BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: A0A151R8H1_CAJCA (Tropinone reductase isogeny n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R8H1_CAJCA)

HSP 1 Score: 194 bits (493), Expect = 1.310e-58
Identity = 102/202 (50.50%), Postives = 136/202 (67.33%), Query Frame = 1 
Query:    1 KGIGKAIVEELTSLGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGKLDILVNNVGTSIRRATVDYTPEEFKQVMDTNFNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPVAA 606
            +GIG A+VEEL   GA+V TCSR   ++ ACLKEWKEKGF+V G+  D ++   R+K++   +  F+GKL+ILVNNVGT++R+ T++YT EE+ ++M TN +S + L QLAY LLK +         G  S+V ISSVA L+S+ SG           YAASKAA+NQ+T+   CEWA D IR N VAPWYTKTPL + + A
Sbjct:   27 RGIGHAVVEELAEFGATVYTCSRNEAELNACLKEWKEKGFSVSGSVCDASSPPQREKLIQQVASAFNGKLNILVNNVGTNVRKPTIEYTSEEYSKLMTTNLDSGYHLCQLAYSLLKAS---------GNGSIVFISSVASLSSVGSGAI---------YAASKAAINQLTKYLACEWAKDNIRSNCVAPWYTKTPLVESLLA 210
[Close]
BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Match: A0A059AFL7_EUCGR (Uncharacterized protein n=9 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059AFL7_EUCGR)

HSP 1 Score: 194 bits (493), Expect = 1.660e-58
Identity = 101/203 (49.75%), Postives = 135/203 (66.50%), Query Frame = 1 
Query:    1 KGIGKAIVEELTSLGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVTTVEGRDKILNLASKTFDGKLDILVNNVGTSIRRATVDYTPEEFKQVMDTNFNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHTNTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPVAAD 609
            KGIG AIVEEL  LGA+V TCSR   ++  CLK+WK KGF V G+T DV++   R+K++   S  FDGKL+IL+NNVGT+  ++T+DYT E+F  +M TNF S + L+QLA+PLLK +         G  S+V +SSV G+ SI  G           Y+A+K AMNQ+T+N  CEWA D IR N+VAPW+  TPL +P+ +D
Sbjct:   37 KGIGHAIVEELARLGATVHTCSRNEAEINECLKDWKSKGFRVSGSTCDVSSRSEREKLMLTVSSVFDGKLNILINNVGTNTLKSTMDYTAEDFSFIMTTNFESAYHLSQLAHPLLKAS---------GAGSIVFLSSVCGVVSINVGSI---------YSATKGAMNQLTKNLACEWAKDNIRSNSVAPWFILTPLAEPLLSD 221
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig541.12851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL76_ECTSI3.000e-9371.36Tropinone reductase, putative / tropine dehydrogen... [more]
D7FL79_ECTSI1.350e-7360.70Tropinone reductase, putative n=1 Tax=Ectocarpus s... [more]
A0A835YM08_9STRA2.430e-6957.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JMS4_9PHAE5.590e-6349.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7G5W5_PHATC2.610e-6054.46Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A8J9SFR7_9CHLO3.180e-6052.66Tropinone reductase homolog At5g06060 n=1 Tax=Cocc... [more]
I3RZU7_LOTJA6.530e-5950.25Uncharacterized protein n=2 Tax=Lotus japonicus Ta... [more]
A0A7J7P982_9MAGN1.030e-5849.49Uncharacterized protein n=1 Tax=Kingdonia uniflora... [more]
A0A151R8H1_CAJCA1.310e-5850.50Tropinone reductase isogeny n=1 Tax=Cajanus cajan ... [more]
A0A059AFL7_EUCGR1.660e-5849.75Uncharacterized protein n=9 Tax=Eucalyptus grandis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig541contigH-paniculata_contig541:257..5172 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.7
Seed ortholog evalue4.2e-75
Seed eggNOG ortholog2880.D7FL76
KEGG rclassRC00144
KEGG koko:K05354,ko:K08081
KEGG ReactionR02832,R06734
KEGG Pathwayko00960,ko01100,ko01110,map00960,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0002213,GO:0003674,GO:0003824,GO:0004022,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0006950,GO:0006952,GO:0007568,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0032502,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0055114
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG0725@2759
EC1.1.1.206,1.1.1.236
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size621
Cds size621
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig541.12851.1prot_H-paniculata_contig541.12851.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig541 257..5172 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930556.2733414-CDS-H-paniculata_contig541:256..4111622930556.2733414-CDS-H-paniculata_contig541:256..411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 257..411 -
1691481346.5467198-CDS-H-paniculata_contig541:256..4111691481346.5467198-CDS-H-paniculata_contig541:256..411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 257..411 -
1622930556.2859707-CDS-H-paniculata_contig541:752..8911622930556.2859707-CDS-H-paniculata_contig541:752..891Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 753..891 -
1691481346.5566068-CDS-H-paniculata_contig541:752..8911691481346.5566068-CDS-H-paniculata_contig541:752..891Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 753..891 -
1622930556.2975562-CDS-H-paniculata_contig541:2455..25991622930556.2975562-CDS-H-paniculata_contig541:2455..2599Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 2456..2599 -
1691481346.5667984-CDS-H-paniculata_contig541:2455..25991691481346.5667984-CDS-H-paniculata_contig541:2455..2599Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 2456..2599 -
1622930556.315718-CDS-H-paniculata_contig541:2767..28511622930556.315718-CDS-H-paniculata_contig541:2767..2851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 2768..2851 -
1691481346.5762703-CDS-H-paniculata_contig541:2767..28511691481346.5762703-CDS-H-paniculata_contig541:2767..2851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 2768..2851 -
1622930556.3277829-CDS-H-paniculata_contig541:5073..51721622930556.3277829-CDS-H-paniculata_contig541:5073..5172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 5074..5172 -
1691481346.589003-CDS-H-paniculata_contig541:5073..51721691481346.589003-CDS-H-paniculata_contig541:5073..5172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig541 5074..5172 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig541.12851.1

>prot_H-paniculata_contig541.12851.1 ID=prot_H-paniculata_contig541.12851.1|Name=mRNA_H-paniculata_contig541.12851.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
KGIGKAIVEELTSLGASVLTCSRTSTDMEACLKEWKEKGFNVIGTTADVT
TVEGRDKILNLASKTFDGKLDILVNNVGTSIRRATVDYTPEEFKQVMDTN
FNSLFLLTQLAYPLLKMAAAADGARETGGSSVVNISSVAGLTSIKSGKHT
NTLTHRTPYAASKAAMNQVTQNWGCEWATDGIRVNAVAPWYTKTPLTQPV
AADAVR*
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mRNA from alignment at H-paniculata_contig541:257..5172-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig541.12851.1 ID=mRNA_H-paniculata_contig541.12851.1|Name=mRNA_H-paniculata_contig541.12851.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4916bp|location=Sequence derived from alignment at H-paniculata_contig541:257..5172- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGGCATTGGAAAAGCCATCGTGGAGGAGTTGACATCCTTGGGAGCTTC
TGTGCTGACTTGCTCCCGGACAAGCACAGATATGGAGGCGTGCTTGAAGG
TATGTGTCAAAAAGCTAAGTCCCGCAGTCTGTACCGCGATTTACCGTACC
TTACAGCGTCCAACAACGCGGGTATAACGTTTGTCAAGTTCAAGAGTTTT
TCGAGATCCAGGAGTCTGTACCATTGCCTAAGGCCGAAAGAACCCATGTG
TCTAGATCTGTTGACAGTGTAATCGATGTTACTGTACTCGTTTGTATGCT
GTAGTGCTGTTCATATGACGCTCTCTAGGGTTGTAGAGTGGCCGGCTTTC
CCGATTGCTGCGGTTCAGCCGCTACGCGTGCGCCATCGCGGTCCGTTATC
CGACCGCACGGGGTGCTAGATTTTCCCGGGCAGGGTCCCCCGGACTTCAG
TGGATAATCATAAGATACATCACCCGGAACAGTGAAAAACCCCAACCGTC
GATATATGGGTGCCCCTGAATGGTACGATGCAATACATCGTCTAAACCCA
TGTATACAAGACTATCGGGGCCGTGCACAACCCTAGCAATTTCAGCCAAG
AACTGTTGGCTGGCGGTGATTTTCGGGTTGTTCGCGGGTAGTCGTCAGGA
AGAAGTTATTTGAAAAAACACGAAACCCGTTTACTGCGATCGGTCGGCAC
ACGGACGCACCATTTTAGGTGGAGATGGGTTGGCGGATTATTTATTTTCT
GTGTGATAATATTCACCTATCGTCGGGGGCTGCTGCCTTTAAGGGATTGT
CGTACTCAAGGTGATCTTCTCGTAAAATCTATGCGGAAAATGTTGCTGAA
AATTGAAGCAGTATTTTATTCACATACTTCGACTGTAGTGATGCTGCAAT
TAGCAAAATGGGCGAGTGAAAGATATACGTGGCAGACAACGGTTGGTCTA
GTGAATTGTCAAGCACCGCTGTTAATGTGAGAAACATAAACCTAAAGATA
TATGGCGGGAGGTTTCACCCCTCGAGGATAATAAAAAAATGATCTACGAG
CAAAATTCCTGAGATGAGCCCAAAACGAAAGCCATTCAGTGCACTTTTCT
TACTACGTTTTTGCCCTAAAACCGGTGGCGATGTGACCCTAAATTTAGTG
CTTTATCCCGGCACCCCCTCTCCTGCTACCAGAGCCTGTTTGGCGAGTAC
CGTGTCACCGATCAAAAACCACATCCCGAGCTCCCTTCACGTTAAATCAG
CACAGGACAGGTTGCTAAGCATAACAATTTTGCTGTGTGGGACACGTGAC
TCGACAATTCTTGGGCTGCACTCAACCACATGCATCAGTCCTCTTGATCT
CACCATGGCATCAGTCCTCTACCCCAGCAACTTTCGCTTCTCGGTGCCTG
GTCGGCGCGGGGGGTTGTTATGAAGCCAATTCCGTCGATTCATGTGTGTA
GCAGGGTGGACATGGTGAACGTACAAAATACACGGCACGCTGGCGGGCAG
TCGTTGCTCTAGCGAGTCGAGTACCTTTGCTGATGTGAGAAAGATTAAGC
TAGATTTATGCAGAAAATAATGTACAGAGTGCTATTTACCCTGGTTACGG
AATAAATACAGGAATCGAGACATGTGCGAGTCTAGCGTGACACATATTTG
TTCGAAGCAATTGTATCGAACTCAAGGGATCGTAGCCCTCAAAAGATGAT
ACCTGCAAGCTACAGGGCCGGCGACGGGTACAATAATGCTCGTTTCAGGC
TCGTGTCTGGAGGTTGCAAGATAATGGCAACTGCAACAACGGCGCCTTGC
TATGGACTGAGAATATCTGCTGTTACGCGATACCTTCACGTGTAGTCGAC
ACATTTTACGTTGTTAACCTTCCTTCCATCTACTTGTAAACACGCCCAGA
CAACATCATCTCAGGCAACATAGTGCTGTCATGACCCTATACAAGACTTG
ACATGATTTGCGTTCATTAGATACAAACCATTAGTGTGTGTAGTGTCCTC
TTCTCTATTTACAGCACTCTGTAGTGCAACTCATCATATGCCTCCTACAA
CGTGTTCTGCACTACACTGGAGACTCTCACATTTTTACCGCGATACGCGG
TGCTCCACAACGAATAGCTGTCATTTGCGAACGACAATATTTAACACTTA
TGATTTTCATCCCTTCGTACGTGGTAATGGTTTCCCTGAGGAGAACATAG
CATACCCAGAGAGTGCTGGTGCATCCGACCCTGTGCCGAGAGGCTTTTGC
ATGCGTGAGGCCCTGTCTTACCCCACGGCGATTTGCTCCCCCGTCTGCGT
GCACATGTCTATATTCTCTAGGAATGGAAGGAGAAGGGCTTCAATGTAAT
CGGTACCACCGCTGATGTCACCACCGTCGAGGGAAGAGATAAAATCTTAA
ATCTGGTGAGTTTGCCCTAGACATGATCGAGCAGGAACAGCCTCTCTTGC
GGGTTGACTGGCCAAATAATGACTTTGTCGGAATGTGAAATGCGAGAGAC
GCAAACGATCTTCGTCGTAATTCACTCGAAAACCAACAACTCTTCCATGT
ATTCGATGCCACTAAATTCAAAGGCTTCCAAAACTTTTGACGGGAAGCTG
GACATCCTCGTGAACAATGTGGGAACCAGTATCAGAAGAGCTACCGTGGA
CTACACTCCTGAGGAGTTCAAGCAAGTTATGGACACCAACTTCAACTCAC
TCTTCTTGCTCACTCAGGTGCGGAGAAGGGAAGCGATATGTGTTGCTCTT
TAACCATGGTGATTAGACCGCGTAGTGCGTTGCAGCAGTGGCGAGTTTGT
GGCGTCGTTTGATGAGGGGAAAAGTGATTATATTGGTTCCATTGTCTCTG
TGGTCTGCACTATCAGTTAGTCCGACAGTCTTGTTGCAGTCTGTACGGGT
AAGGCGACGACCTATGAGAGCTATCTGATGCTTGATGAACGCTCCTACTT
TGTGCGGGTTATTCGAATATCTCGAGGACATGGCTACAGAAGAGACGCAC
TCTTCTTTTTCCTGTGGTTGCCCTCGGGACACATCGCGGGTCAGCTAAGA
ACACGATGCACTTGTAACATTTTACGACTTGTGTCATGCGACAAGCCATC
CAGTGTTGATGCGTCAAGACACCCTAGCGAATTTAGGTACCGTCCTTGCG
GTACAAGTGGAGACGCTCCTGAAGCAGCAAGGCCTGCATTCCGACCTACG
CGTACATCTCGAAGAAGATAGTGCTATACCAGGCGAATAACAATGATCTG
TCGTGCTCAACTGCTGTCAGCACTCAACTCGATTCATACCCGCGTAGTCT
CTGCCTGAAGAACGAATCACCCAAGGAGCGCTTGGGCATTTTCTGTCCTA
CCCCCGTTTGTCTGGCATGACTCCTGTCGAATTGTCTCGGTGAGGCGCTT
TCCCCCGATTCTCCGGTCGTCTGTCATCCGTGCATTTGTGGAATGCTCCA
CTTCCCCACCTCGGTACCAACGATGATAGTCCTTGCGGATTACACATGCA
AATAGCAGGGAACCAAGCCCGCTGCTTCCGTCTCCAGTGTCAAGCTGTTT
GCTCTCGGTTTTAGTTATCCTTTCAAGCGGAGCCGAAGATCGTTGCGATC
TTCTCTGTGAAGCCTTGCTACATGGGTAACGTTTGGTTTCTCGAGATGCC
GAAAAGCCTCGTGACGGCAAATCCAGGTTGGCGCAGGAGTGCAAGGTTAT
TGATAATTACTTTCGTGAAACCCAGACATGCATCAGCACCCTCAAATGGT
ATGGATGGTTAGTCATGGGTAGTAGCCCCTGCACTCCTCCGTTCTTGATC
GTAGAGACGACGGATCACACCCTTGGGATGTCTTCTCAACAAATCTCAGC
AGCAACAACCTCGAGAGACAACATCTGTTACCACGCCTTCAAGCTCCGTC
AGAAGTACATGAGCAGGTAGTCCCCATTGTAGGTCGTGAAAATGCCTGCG
TGTACGTTGTGCGTACGCGGAGTTGTATACACGAGAGTATGCTTACGCCT
GTGCCATGTGTAGCACTGTCACCCGGTTTGCGCAACCATCCTATTACAAA
TCCAGTGTGACGTAGCCAAACCCAACTGGATCCGGAGTGGCTACCACCCC
AATAGTATACCCTTACGAACGGAGTGTGGGCAGGCGAAAATCCGGCGTAT
AGGTTTCAACATCGTGCTATCAATGGTCTGTATATATAGATCAGGGGGTG
TCGTGAGTACCCCGCTACCTATCGCCGGAATCCCCTGATTCCTTCCATTT
GCTTCTCACCATATCATAATCGGTTTGACAGCTGGCATATCCTCTACTGA
AGATGGCGGCTGCGGCGGATGGAGCAAGGGAAACGGGAGGTTCATCCGTT
GTTAACATTTCTAGCGTTGCCGGGCTCACGTCCATCAAATCAGGCAAGCA
CACCAACACACTGACACACAGTACTGTGACAGTCTTGGTGACACTATCGA
GCGAAAAAAAGGATATTCGCAAGATCATATTCTTCTATATATAACATCGC
CTTGCCATGGCCACATCGTCGCCCACCTCTTGACCTGTTTCGCATATCAC
ACAGACATGACTTCACCGGACGTGTAGCTCGCCGTGGTACATGTTCCGCC
CGTTTTTCCGCTTTGCATCAAACTCGGAAAGGTGATCCTCTCGAACACAT
CCCCAAACTATCAAAGTGGGGAGGTGTGAACACGAAGCATATCTAGATTA
ACATGAAACACAGCCCATGACCCCCTCACCGTTCCCAAACTGGAATGCTT
TGGTTTTACAGGAACCCCTTACGCCGCGAGTAAGGCTGCGATGAATCAGG
TTACGCAGAACTGGGGTTGCGAATGGGCAACTGATGGGATCCGGGTCAAC
GCTGTCGCTCCGTGGTACACAAAGACTCCTCTGACGCAGCCGGTAGCTGC
GGATGCTGTCAGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig541:257..5172-

>mRNA_H-paniculata_contig541.12851.1 ID=mRNA_H-paniculata_contig541.12851.1|Name=mRNA_H-paniculata_contig541.12851.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at H-paniculata_contig541:257..5172- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGGCATTGGAAAAGCCATCGTGGAGGAGTTGACATCCTTGGGAGCTTC
TGTGCTGACTTGCTCCCGGACAAGCACAGATATGGAGGCGTGCTTGAAGA
AGGGCATTGGAAAAGCCATCGTGGAGGAGTTGACATCCTTGGGAGCTTCT
GTGCTGACTTGCTCCCGGACAAGCACAGATATGGAGGCGTGCTTGAAGGA
ATGGAAGGAGAAGGGCTTCAATGTAATCGGTACCACCGCTGATGTCACCA
CCGTCGAGGGAAGAGATAAAATCTTAAATCTGGAATGGAAGGAGAAGGGC
TTCAATGTAATCGGTACCACCGCTGATGTCACCACCGTCGAGGGAAGAGA
TAAAATCTTAAATCTGGCTTCCAAAACTTTTGACGGGAAGCTGGACATCC
TCGTGAACAATGTGGGAACCAGTATCAGAAGAGCTACCGTGGACTACACT
CCTGAGGAGTTCAAGCAAGTTATGGACACCAACTTCAACTCACTCTTCTT
GCTCACTCAGGCTTCCAAAACTTTTGACGGGAAGCTGGACATCCTCGTGA
ACAATGTGGGAACCAGTATCAGAAGAGCTACCGTGGACTACACTCCTGAG
GAGTTCAAGCAAGTTATGGACACCAACTTCAACTCACTCTTCTTGCTCAC
TCAGCTGGCATATCCTCTACTGAAGATGGCGGCTGCGGCGGATGGAGCAA
GGGAAACGGGAGGTTCATCCGTTGTTAACATTTCTAGCGTTGCCGGGCTC
ACGTCCATCAAATCAGGCAAGCACACCAACACACTGACACACACTGGCAT
ATCCTCTACTGAAGATGGCGGCTGCGGCGGATGGAGCAAGGGAAACGGGA
GGTTCATCCGTTGTTAACATTTCTAGCGTTGCCGGGCTCACGTCCATCAA
ATCAGGCAAGCACACCAACACACTGACACACAGAACCCCTTACGCCGCGA
GTAAGGCTGCGATGAATCAGGTTACGCAGAACTGGGGTTGCGAATGGGCA
ACTGATGGGATCCGGGTCAACGCTGTCGCTCCGTGGTACACAAAGACTCC
TCTGACGCAGCCGGTAGCTGCGGATGCTGTCAGGTAAGAACCCCTTACGC
CGCGAGTAAGGCTGCGATGAATCAGGTTACGCAGAACTGGGGTTGCGAAT
GGGCAACTGATGGGATCCGGGTCAACGCTGTCGCTCCGTGGTACACAAAG
ACTCCTCTGACGCAGCCGGTAGCTGCGGATGCTGTCAGGTAA
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