mRNA_H-paniculata_contig54.12830.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: D8LKJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ0_ECTSI) HSP 1 Score: 258 bits (660), Expect = 1.730e-86 Identity = 129/153 (84.31%), Postives = 146/153 (95.42%), Query Frame = 1
Query: 1 MVKSVSTQELSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGTSPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEYVNMV 459
M + ++++LS ELAEFREIFDLVDRDGGGTVTKEELGELM+TLGIEATPEEVDLM+DEIDQDN+GEIDFEEFVAVMSRKVNASY+ADQVK AFKVFEG SPPGHIKI+S++KALTTYGSEQLTEEQAHDLVS+LEPDH+G+VNYVEY+NM+
Sbjct: 1 MTRQTASEDLSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMM 153
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: F0YC57_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC57_AURAN) HSP 1 Score: 224 bits (570), Expect = 7.590e-73 Identity = 110/144 (76.39%), Postives = 134/144 (93.06%), Query Frame = 1
Query: 28 LSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGTSPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEYVNMV 459
LS++ELAEFREIF+LVDRDGGGT+TKEELGELM+TLGI+ATPEE+DLM+ EIDQDN+GEIDFEEFVAVMSRKV+A+Y+ADQVK AFKVFEG +P GHIK+D +I+ALT G+++LT+EQAHDLVS+LEPD G++NY EYVNM+
Sbjct: 5 LSNEELAEFREIFNLVDRDGGGTITKEELGELMDTLGIDATPEEIDLMIHEIDQDNNGEIDFEEFVAVMSRKVSATYTADQVKNAFKVFEGDAPSGHIKVDVLIRALTNDGTDKLTDEQAHDLVSQLEPDRSGLINYSEYVNMM 148
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: A0A835YUG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG4_9STRA) HSP 1 Score: 223 bits (567), Expect = 2.930e-72 Identity = 110/150 (73.33%), Postives = 139/150 (92.67%), Query Frame = 1
Query: 10 SVSTQELSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGTSPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEYVNMV 459
S +L+++E+AEFREIF LVDRDGGGT+TK ELG+LM+TLGIEAT EE++LMV EIDQDN+GEIDF+EFVAVMSRKVNASY+ +QVKGAFKVFEG++P G+IK++S+++ALTTYG+E+LTEEQA +LVS+LEPDH+GMVNYVEYVN++
Sbjct: 7 SEDAYQLTAEEVAEFREIFSLVDRDGGGTITKVELGDLMDTLGIEATAEEIELMVAEIDQDNNGEIDFQEFVAVMSRKVNASYTPEQVKGAFKVFEGSAPSGYIKMESLVRALTTYGTEKLTEEQARELVSQLEPDHNGMVNYVEYVNIM 156
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: A0A6V1LFC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LFC1_HETAK) HSP 1 Score: 219 bits (557), Expect = 1.150e-70 Identity = 106/147 (72.11%), Postives = 135/147 (91.84%), Query Frame = 1
Query: 19 TQELSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGTSPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEYVNMV 459
T LS +EL EFREIF+LVDRDGGG++TKEELG+LM+TLGI+A+PEE+DLM++EIDQDN+GEIDF EFVAVMSRKVNA+Y+++QVK AF+VFEG SPPG+IK+D++ KAL TYG+E+LT+EQA +LVS+LEPD G++NYVEYVNM+
Sbjct: 16 TLNLSEEELQEFREIFNLVDRDGGGSITKEELGDLMDTLGIDASPEEIDLMINEIDQDNNGEIDFNEFVAVMSRKVNATYTSEQVKNAFRVFEGASPPGYIKVDALAKALQTYGAEKLTDEQARELVSQLEPDAHGLINYVEYVNMM 162
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: A0A8J2SL49_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL49_9STRA) HSP 1 Score: 214 bits (544), Expect = 7.150e-69 Identity = 103/144 (71.53%), Postives = 134/144 (93.06%), Query Frame = 1
Query: 28 LSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGTSPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEYVNMV 459
L+ +ELAEFREIF+LVD+DGGGT++KEELGELM TLGI+ATPEE+DLM+ EID+DN+G IDF+EFVAVMSRKV+A+Y+A+QV+GAF+VFE +PPGHIK++S+++ALTT GS++L+EEQA DLV++LEPD DG+VNY EYVNM+
Sbjct: 5 LTPEELAEFREIFNLVDKDGGGTISKEELGELMETLGIDATPEEIDLMIAEIDEDNNGVIDFDEFVAVMSRKVSATYTAEQVRGAFRVFESGAPPGHIKVESLVRALTTDGSDKLSEEQARDLVAQLEPDRDGLVNYKEYVNMM 148
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: A0A067BG90_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BG90_SAPPC) HSP 1 Score: 203 bits (516), Expect = 1.270e-64 Identity = 99/147 (67.35%), Postives = 129/147 (87.76%), Query Frame = 1
Query: 19 TQELSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGTSPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEYVNMV 459
TQELS E+ EFREIF+LVDRD GG++TK ELGELM+TLGI +PEE+DLM++EIDQD++GEIDF+EFVAVMSRKVNA+YSADQVK +FK+FE S PG I+++ ++ ALTTYGS++++EEQA +L+ +LEPD +G+VNY EYVNM+
Sbjct: 2 TQELSETEITEFREIFNLVDRDRGGSITKVELGELMDTLGINTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYSADQVKASFKMFENPSTPGCIRVERLVSALTTYGSDKISEEQARELICQLEPDSNGLVNYEEYVNMM 148
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: A0A485KUA7_9STRA (Aste57867_11938 protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KUA7_9STRA) HSP 1 Score: 199 bits (505), Expect = 5.990e-63 Identity = 98/145 (67.59%), Postives = 127/145 (87.59%), Query Frame = 1
Query: 25 ELSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGTSPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEYVNMV 459
ELS E+AEFREIF+LVDRD GG++TK ELGELM+TLGI +PEE+DLM++EIDQD++GEIDF+EFVAVMSRKVNA+YSADQVK +F++FE + PG IK+D + +ALT YGS++L+ EQA +L+S+LEPD +GM+NY EYVNM+
Sbjct: 4 ELSENEIAEFREIFNLVDRDRGGSITKAELGELMDTLGINTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYSADQVKMSFRMFENPNTPGFIKVDRLHRALTMYGSDKLSSEQASELISQLEPDSNGMINYEEYVNMM 148
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: A0A7S1GDX7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDX7_9STRA) HSP 1 Score: 199 bits (505), Expect = 9.750e-63 Identity = 98/144 (68.06%), Postives = 126/144 (87.50%), Query Frame = 1
Query: 28 LSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGTSPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEYVNMV 459
L+ +ELAEFREIF+LVD+DGGGT++K+EL ELM TLGI A+PEEV+LM++E+D+D SGEIDFEEFVAVMSRKVN+SY+ DQVK AFK+FEGT+P G+IK+ ++ ALTTY SE +TE QA +L+S+LEPD +G+VNY EYV M+
Sbjct: 20 LTDEELAEFREIFNLVDKDGGGTISKDELLELMETLGINASPEEVELMINEVDEDQSGEIDFEEFVAVMSRKVNSSYTPDQVKAAFKIFEGTAPSGYIKVGDLLTALTTYCSETVTEAQAAELISQLEPDTNGLVNYAEYVTMM 163
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: H3H091_PHYRM (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=H3H091_PHYRM) HSP 1 Score: 195 bits (496), Expect = 1.450e-61 Identity = 98/148 (66.22%), Postives = 128/148 (86.49%), Query Frame = 1
Query: 19 TQELSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGT-SPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEYVNMV 459
T LSS+EL EFREIF+LVDRD GG++TK ELGELM+TLGI+ +PEE+DLM++EIDQD++GEIDF+EFVAVMSRKVNA+Y+++QVK AFK FEG S PG IK D ++ ALTTYG+++++ +QA +L+S+LEPD G +NYVEYVNM+
Sbjct: 2 THALSSEELIEFREIFNLVDRDRGGSITKVELGELMDTLGIDTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYTSEQVKTAFKAFEGNASAPGFIKADKLLIALTTYGADRISSDQAQELISQLEPDQHGNINYVEYVNMM 149
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Match: A0A7S3H4J2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4J2_9STRA) HSP 1 Score: 191 bits (486), Expect = 3.270e-60 Identity = 93/140 (66.43%), Postives = 123/140 (87.86%), Query Frame = 1
Query: 28 LSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATPEEVDLMVDEIDQDNSGEIDFEEFVAVMSRKVNASYSADQVKGAFKVFEGTSPPGHIKIDSIIKALTTYGSEQLTEEQAHDLVSELEPDHDGMVNYVEY 447
LS++E++EFREIF+LVD+DGGG++TK EL +LM+TLGI+A+PEE+D M+ EIDQD +G+IDFEEFV VMSRKVNA+Y++DQVKGAFKVFE + PGHIK +++IKAL TYG+E+LTE+QAH+LV +LE D G +NY +Y
Sbjct: 1 LSAEEISEFREIFNLVDKDGGGSITKVELADLMDTLGIDASPEEIDAMIFEIDQDGNGDIDFEEFVTVMSRKVNATYTSDQVKGAFKVFEAQANPGHIKAEALIKALCTYGTEKLTEDQAHELVGQLEVDAAGYINYSDY 140 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54.12830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig54.12830.1 >prot_H-paniculata_contig54.12830.1 ID=prot_H-paniculata_contig54.12830.1|Name=mRNA_H-paniculata_contig54.12830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp MVKSVSTQELSSQELAEFREIFDLVDRDGGGTVTKEELGELMNTLGIEATback to top mRNA from alignment at H-paniculata_contig54:5044..7176+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig54.12830.1 ID=mRNA_H-paniculata_contig54.12830.1|Name=mRNA_H-paniculata_contig54.12830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2133bp|location=Sequence derived from alignment at H-paniculata_contig54:5044..7176+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig54:5044..7176+ >mRNA_H-paniculata_contig54.12830.1 ID=mRNA_H-paniculata_contig54.12830.1|Name=mRNA_H-paniculata_contig54.12830.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=918bp|location=Sequence derived from alignment at H-paniculata_contig54:5044..7176+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |