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Homology
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: A0A6H5KAJ4_9PHAE (Brix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAJ4_9PHAE) HSP 1 Score: 490 bits (1262), Expect = 2.110e-164 Identity = 240/290 (82.76%), Postives = 257/290 (88.62%), Query Frame = 1
Query: 604 EFVSDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRAPDGPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKGDGTDSSLNRKIEKGQPXXXXXXXXXXX-DPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLDDVF 1470
EF SDGTYRNKQRVLLFSSRGITSRFRHLL DLRKLIPHHKKDVKLDVGR ESLSSAVNEIAEIKSCNSCVF ECRK++DLYLWAG+ P GPSAKFHVLNVHTMDELKLTGN MLGSRPLLNFD+KFDQTPHW+V+KGILTDIFN PRGHPKSKPFIDR+MSFFVADGK+WVRNYQIVDKGDG+ + LNRKIE D LSLVEMGPRFVLNPIRVFAGSFGGPTLY+N AYVSPND R+ +KR+AG K+EDRQE+KK V+ KKAEPAVPRGPLDDVF
Sbjct: 148 EFASDGTYRNKQRVLLFSSRGITSRFRHLLGDLRKLIPHHKKDVKLDVGRDESLSSAVNEIAEIKSCNSCVFLECRKKSDLYLWAGKTPTGPSAKFHVLNVHTMDELKLTGNSMLGSRPLLNFDAKFDQTPHWRVVKGILTDIFNPPRGHPKSKPFIDRVMSFFVADGKVWVRNYQIVDKGDGSTTGLNRKIEAATTAAGGGGEGTGAEDSLSLVEMGPRFVLNPIRVFAGSFGGPTLYNNAAYVSPNDVRSARKRKAGTKFEDRQEAKKVVRGKKAEPAVPRGPLDDVF 437
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: D8LM67_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM67_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 4.880e-142 Identity = 213/289 (73.70%), Postives = 230/289 (79.58%), Query Frame = 1
Query: 604 EFVSDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRAPDGPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKGDGTDSSLNRKIEKGQPXXXXXXXXXXXDPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLDDVF 1470
EF SDGTYRNKQRVLLFSSRGITSRFRHLL DLRKLIPHHKKDVKLDVGR ESLSSAVNEIAEIKSCNSCVF ECRK+TDLYLWAG+ P GPSAKFHVLNVHTMDELKLTGN MLGSRPLLNFD+KFDQTPHW+V+KGIL DIFNTPRGHPKSKPFIDR+MSFFVADGK+WVRNYQIVDKGDG+ + L FGGPTLY+N AYVSPND R+ +KR+AG K+EDRQE+KK V+ KKAEPAVPRGPLDD+F
Sbjct: 68 EFASDGTYRNKQRVLLFSSRGITSRFRHLLGDLRKLIPHHKKDVKLDVGRDESLSSAVNEIAEIKSCNSCVFLECRKKTDLYLWAGKTPTGPSAKFHVLNVHTMDELKLTGNSMLGSRPLLNFDAKFDQTPHWRVVKGILKDIFNTPRGHPKSKPFIDRVMSFFVADGKVWVRNYQIVDKGDGSTTGLK-----------------------------------------PFGGPTLYNNAAYVSPNDVRSARKRKAGTKFEDRQEAKKVVRGKKAEPAVPRGPLDDLF 315
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: A0A835YV20_9STRA (Brix domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV20_9STRA) HSP 1 Score: 386 bits (991), Expect = 8.050e-125 Identity = 183/288 (63.54%), Postives = 223/288 (77.43%), Query Frame = 1
Query: 607 FVSDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRAPDGPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKGDGTDSSLNRKIEKGQPXXXXXXXXXXXDPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLDDVF 1470
F SDG YRNKQRVL+FSSRG+TSR RHL+ DLRKLIPHHKKDVKLDVGRGESL+ AVN I+E+KSCN+ VFFECRK+ D+Y+W G+ P GPS KF V+N+HTMDELKLTGNCM+GSRPLL+FD KF Q+PHW++ +LTD+F TPRGHPKSKPFIDRIMSF++AD K+WVRNYQI+D GDG + + + +G+ + SLVE+GPRFVL PIR+F+GSFGGPTLY N AYVSPN+ RA KKR G KY D+ ++ +EK + P DD+F
Sbjct: 91 FKSDGAYRNKQRVLIFSSRGVTSRSRHLIEDLRKLIPHHKKDVKLDVGRGESLAQAVNAISEMKSCNNTVFFECRKKKDIYMWVGKTPHGPSGKFLVMNIHTMDELKLTGNCMMGSRPLLSFDDKFQQSPHWQLTAALLTDVFGTPRGHPKSKPFIDRIMSFYIADNKVWVRNYQIIDAGDGG-AKEKKLVHQGK------------EVTSLVEIGPRFVLEPIRLFSGSFGGPTLYQNPAYVSPNEVRANKKRAEGAKYHDKATARIQAREKIENLVRVQDPTDDIF 365
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: A0A6S9HVR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HVR3_HETAK) HSP 1 Score: 340 bits (873), Expect = 3.180e-107 Identity = 170/287 (59.23%), Postives = 209/287 (72.82%), Query Frame = 1
Query: 601 QEFVSDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRAPDGPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKGDGTDSSLNRKIEKGQPXXXXXXXXXXXDPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLD 1461
++ SDG+YRNKQR L+FS+RG+TSR RHLL DLR+L+PHHKKD KLD+ + VNEIAE+KSCN +F E RKR DLYLWA RAP GPSAKF V NVHTMDEL+LTGN +LGSRP L FD+KF +PHW+++K +L F TPRGHPKSKPFIDR+MSF +ADGK+WVRN+QI+D+ DG + R EK + SLVE+GPRFVL PIR+F GSFGG TLY N A+VSPN ARA K+R+ G KY DRQ +K + KE+ +P+ L+
Sbjct: 86 KQIPSDGSYRNKQRCLVFSTRGVTSRHRHLLADLRRLMPHHKKDAKLDI---KGKLQVVNEIAEMKSCNGVLFLEARKRLDLYLWAARAPQGPSAKFLVNNVHTMDELRLTGNALLGSRPFLAFDAKFQTSPHWQLIKSLLGITFGTPRGHPKSKPFIDRVMSFAIADGKVWVRNFQILDQADG--GKVERAAEKS---------GNLDELTSLVEIGPRFVLTPIRIFDGSFGGATLYQNPAFVSPNAARAQKRRKKGLKYTDRQIAKTTSKERAQSNVMPKTGLE 358
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: A0A7S3L9L9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9L9_9STRA) HSP 1 Score: 331 bits (848), Expect = 8.780e-104 Identity = 162/294 (55.10%), Postives = 208/294 (70.75%), Query Frame = 1
Query: 601 QEFVSDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRA---PDGPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKGDGTDSSLNRKIEKGQPXXXXXXXXXXXDPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLDDVFQ 1473
+ +SDG YRNKQR L SSRG+ +RFRHL+ DLR L+PHHKK+ KLD G E ++ AVN+IAEI+ CNS +F ECRKR D Y+W GR GPSA+FHV NVHTMDEL+LTGNCM GSRP+L FD+ F++ H K+L+ + TDIF TPRGHPK+KPF+DR+M+F+ AD +IWVRNYQI+++ ++ + G SLVE+GPRFVLNPIR+F GSFGG TLY N YVSPN RA++++ G YE+R+ S+ KE+KA+ VP PLD VF+
Sbjct: 65 EPMLSDGKYRNKQRCLTVSSRGVPARFRHLMEDLRTLMPHHKKESKLDPG-AEGVAQAVNDIAEIRGCNSVLFLECRKRQDCYMWLGRTGADAKGPSARFHVSNVHTMDELRLTGNCMKGSRPILTFDNSFEKFGHLKLLRELFTDIFGTPRGHPKAKPFVDRVMAFYYADRRIWVRNYQILEQQPANAKEAHQVKKSGHELST-----------SLVEIGPRFVLNPIRIFRGSFGGQTLYRNPDYVSPNATRAMERKAKGMAYEERKNSQNLRKERKAQIVVPEDPLDSVFR 346
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: A0A1E7F9Z5_9STRA (Brix-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9Z5_9STRA) HSP 1 Score: 327 bits (839), Expect = 1.120e-102 Identity = 163/291 (56.01%), Postives = 210/291 (72.16%), Query Frame = 1
Query: 613 SDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRAPD--GPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKGDGTDSSLNRKIEK--GQPXXXXXXXXXXXDPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLDDVFQ 1473
SDG YRNKQR L+ RG T+R+RHLL DLR ++PHHKK+ KLD G+ + +SAVN+IA+++ CN+ +F ECRKR D YLW GR D GPSAKFH+ N HTMDEL+LTGNCM GSRP+L FD+ FD T H ++LK I TD+F TPRGHPKSKPF+DR+M+F+ AD KIWVRNYQI+++ T++ ++K GQ + SLVE+GPRFVLNPIR+F GSFGG TL+ N +VSPN+ RA +K+R G Y DR++S+K K + E +P PLD VF+
Sbjct: 53 SDGKYRNKQRCLVLCLRGATARYRHLLEDLRTMLPHHKKESKLDAGKNGA-ASAVNDIAQMRGCNTVLFLECRKRQDAYLWLGRVGDNLGPSAKFHLTNCHTMDELRLTGNCMRGSRPILTFDAAFDTTSHLRLLKTIFTDVFGTPRGHPKSKPFVDRVMAFYYADNKIWVRNYQILEQ-QATNALEAHTLKKKSGQE-----------ESTSLVEIGPRFVLNPIRIFRGSFGGQTLFQNPDFVSPNEIRAEEKKRQGLSYTDRKDSQKRRKTRHEELVLPEDPLDSVFR 330
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: A0A448YY42_9STRA (Brix domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YY42_9STRA) HSP 1 Score: 327 bits (837), Expect = 2.370e-102 Identity = 163/291 (56.01%), Postives = 213/291 (73.20%), Query Frame = 1
Query: 613 SDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRAPD--GPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKG--DGTDSSLNRKIEKGQPXXXXXXXXXXXDPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLDDVFQ 1473
SDG YRNKQR L+ RG T+R+RHLL DLR L+PHHKK+ KLD G+G + ++AVN+IA+I+ CN+ +F ECRKR D YLW GR D GPSAKFH+ NVHTMDEL+LTGNCM GSRP+L FD F++ H K+LK + TD+F TPRGHPKSKPF+DR+M+F+ AD KIWVRNYQIV++ + ++ +K+ GQ + SLVE+GPRFVLNPIR+F GSFGG TL+ N +VSPN+ RA++K+R G YE R+ES+K K ++ + +P PL+ VF+
Sbjct: 55 SDGKYRNKQRCLVLCLRGATARYRHLLEDLRTLLPHHKKESKLDSGKGGA-ATAVNDIAQIRGCNTVLFMECRKRQDAYLWLGRTGDNHGPSAKFHLTNVHTMDELRLTGNCMKGSRPILTFDESFEKHGHLKLLKSLFTDVFGTPRGHPKSKPFVDRVMAFYYADKKIWVRNYQIVEEQPTNALEAHQAKKLS-GQE-----------ESTSLVEIGPRFVLNPIRIFRGSFGGQTLFQNPDFVSPNEIRAVEKKRKGRSYELRKESQKMRKSRQEDYVLPEDPLNSVFR 332
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: A0A7R9ZS21_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZS21_9STRA) HSP 1 Score: 326 bits (836), Expect = 3.020e-102 Identity = 162/301 (53.82%), Postives = 207/301 (68.77%), Query Frame = 1
Query: 610 VSDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRAPD-------------GPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKGDGTDSSLNRKIEKGQPXXXXXXXXXXXDPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLDDVFQ 1473
+SDG YRNKQR L+ SRG+T+R+RHLL DLR L+PHHKK+ KLD G E ++SAVN IA I+SCNS +F ECRKR D Y+W GR GPSAKFH+ N+HTMDELK+TGNCM GSRP+L+FD FD+ PH K+LK + D+F PRGHPKSKPF+DR+M+F+ AD KIWVR+YQIV+ D +++ + + K Q SLVE+GPRFVLNPIR+F GSFGG TL+ N ++SPN+ RAL+ +R G Y R+E++K K K VP PLD +F+
Sbjct: 40 ISDGRYRNKQRCLMLCSRGVTARYRHLLEDLRTLVPHHKKESKLDPG-DEGMASAVNNIAGIRSCNSVMFLECRKRMDAYMWLGRVGSNSAAGGGSTNQVKGPSAKFHITNIHTMDELKMTGNCMKGSRPILSFDESFDRVPHLKLLKELFVDVFGVPRGHPKSKPFVDRVMAFYFADDKIWVRHYQIVE--DQPTNAMEQHLSKKQLGQDAAT--------SLVEIGPRFVLNPIRIFRGSFGGQTLFQNPEFISPNEIRALEGKRKGDVYVGRKENQKKRKVHKDSIVVPEDPLDSIFK 329
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: A0A7S0Y7K0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y7K0_9STRA) HSP 1 Score: 325 bits (834), Expect = 6.390e-102 Identity = 165/290 (56.90%), Postives = 206/290 (71.03%), Query Frame = 1
Query: 613 SDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRAPD--GPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKGDGTDSSLNR-KIEKGQPXXXXXXXXXXXDPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLDDVFQ 1473
SDG YRNKQR L+ RG T+R+RHLL DLR LIPHHKK+ KLD G+ + +SAVN+IA+++ CN+ +F ECRKR D YLW GR + GPSAKFH+ NVHTMDEL+LTGNCM GSRPLL FD F + H K+LK + TD+F TPRGHPKSKPF+DR+M+F+ AD KIWVRNYQIV + ++ K GQ D SLVE+GPRFVLNPIR+F GSFGG TL+ N +VSPN+ RA++K+R G YE R+ES+K K ++ E +P PL VF+
Sbjct: 54 SDGKYRNKQRCLVLCLRGATARYRHLLEDLRTLIPHHKKESKLDSGKNGA-ASAVNDIAQMRGCNTVLFLECRKRQDAYLWLGRVGENLGPSAKFHLTNVHTMDELRLTGNCMKGSRPLLTFDESFKKHDHLKLLKSLFTDVFGTPRGHPKSKPFVDRVMAFYYADKKIWVRNYQIVQQQPTNALEAHQAKKRNGQE-----------DSTSLVEIGPRFVLNPIRIFRGSFGGQTLFQNPDFVSPNEIRAIEKKRKGRSYELRKESQKIRKSRQEEYVLPEDPLGSVFR 331
BLAST of mRNA_H-paniculata_contig5386.12814.1 vs. uniprot
Match: A0A7S0CBG3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBG3_9STRA) HSP 1 Score: 327 bits (837), Expect = 1.390e-101 Identity = 164/289 (56.75%), Postives = 200/289 (69.20%), Query Frame = 1
Query: 607 FVSDGTYRNKQRVLLFSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKSCNSCVFFECRKRTDLYLWAGRAPDGPSAKFHVLNVHTMDELKLTGNCMLGSRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVADGKIWVRNYQIVDKGDGTDSSLNRKIEKGQPXXXXXXXXXXXDPLSLVEMGPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQESKKSVKEKKAEPAVPRGPLDDVFQ 1473
F SDG YRNKQR LL SRG+T+R+RHLL DLR IPH+K+D KLD G + + +AVNEIA++KSCNS +F ECRKR D Y G P GPSA+F V NVHTMDEL+LTGNCM GSRP+LNFD F+ PH ++LK + D+F TPRGHPKSKPF+DRIM F+ AD KIWVRNYQI+D+ ++ I+K Q +LVE+GPRFV+ PIR+FAGSFGG TLY N YVSPN RA K G YE R+ ++ S K++ VP PLDDVF+
Sbjct: 100 FTSDGKYRNKQRCLLLCSRGVTARYRHLLEDLRTFIPHNKRDSKLDPGE-QGIGAAVNEIAQVKSCNSFLFVECRKRQDCYFTLGHTPRGPSARFLVNNVHTMDELRLTGNCMRGSRPVLNFDESFESVPHLRLLKELFIDVFGTPRGHPKSKPFVDRIMGFYYADKKIWVRNYQIIDQ-QAQNAKDAHAIKKQQEGANSAPDSIKGLETNLVEIGPRFVMTPIRIFAGSFGGQTLYLNDDYVSPNTVRAAHKSNKGNAYESRKFAQASRKDRGERIVVPEDPLDDVFR 386
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 429.9 |
| Seed ortholog evalue | 1.6e-117 |
| Seed eggNOG ortholog | 2880.D8LM67 |
| Preferred name | BRX1 |
| KEGG ko | ko:K14820 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042134,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904 |
| EggNOG free text desc. | ribosomal large subunit assembly |
| EggNOG OGs | COG5154@1,KOG2971@2759 |
| Ec32 ortholog description | Anticodon-binding |
| Ec32 ortholog | Ec-18_002660.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03009 |
| Exons | 6 |
| Model size | 2242 |
| Cds size | 1425 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5386.12814.1 >prot_H-paniculata_contig5386.12814.1 ID=prot_H-paniculata_contig5386.12814.1|Name=mRNA_H-paniculata_contig5386.12814.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=475bp
MARKRTRQEEISPKAGDGSRKSAAARSSGTKVKRSSKGNRVAPQVVSSDA
GRANGPAVVAAASAAVPATGVEVTATSNNQENDMSEDEGVGDGNQRNEEK
EEGSSNDGSEEENDSDSDDDNDDDDEGGEDDDDSDGSVRDFRKRMRRKRD
KDRAAAAGSATGNGSTVENEEQGKGEGEGEGEEQEFVSDGTYRNKQRVLL
FSSRGITSRFRHLLTDLRKLIPHHKKDVKLDVGRGESLSSAVNEIAEIKS
CNSCVFFECRKRTDLYLWAGRAPDGPSAKFHVLNVHTMDELKLTGNCMLG
SRPLLNFDSKFDQTPHWKVLKGILTDIFNTPRGHPKSKPFIDRIMSFFVA
DGKIWVRNYQIVDKGDGTDSSLNRKIEKGQPGAAGVGGVGGVDPLSLVEM
GPRFVLNPIRVFAGSFGGPTLYHNGAYVSPNDARALKKRRAGFKYEDRQE
SKKSVKEKKAEPAVPRGPLDDVFQ* back to topmRNA from alignment at H-paniculata_contig5386:905..13825+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5386.12814.1 ID=mRNA_H-paniculata_contig5386.12814.1|Name=mRNA_H-paniculata_contig5386.12814.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12921bp|location=Sequence derived from alignment at H-paniculata_contig5386:905..13825+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTTGCCGTGCTGCGGAACGACGCCGTAGACCACGAAAGAGTTTGAGAGA
GATGGCCCGAAAGCGTACAAGGCAAGAGGAAATTTCTCCTAAAGCTGGTG
ATGGATCTAGGAAATCAGCAGCTGCGCGGTCATCAGGAACGAAGGTGAAG
AGATCAAGCAAGGGGAATCGAGTAGCACCTCAAGTGGTAAGTTCGGATGC
TGGCCGCGCAAATGGGCCTGCTGTTGTTGCTGCTGCTTCTGCTGCTGTTC
CCGCGACTGGTGTCGAGGTAACAGCAACAAGTAATAACCAGGAGAACGAC
ATGTCAGAGGATGAAGGAGTTGGGGATGGGAATCAGAGAAATGAGGAGAA
AGAGGAAGGGTCGAGCAACGACGGGTCTGAAGAGGAAAACGACAGCGACA
GCGACGATGACAATGATGATGATGATGGTGAGTGCGGCGGTTCAAATGGG
TGGTAGCTGGCTTCACTTCTTACTCGAGTGGAGACTCTCTGGCTAGTATA
TGCACTTCAGACAATTGTAAGACGTACGGCGTAGACAACCGGGGTGTATC
ACGCTAGAGCTCTAGGTCCACACCTGAAATGCAGCCGGTAGGTGTGCCGG
AAACAGCTCTCCTCGTGTGTTCATTCCCTCTTTTCGTGCGCTGCCACCAC
AGATGCTCAAGTATACTGAAATACTCTTTTTCGTTCTTGTCTAAAAGACT
GAATTAGCCAACACATGATATTTTGACGCCCATTCACTCTGCCATCGGTC
ACACCAGATGAACCAGTCGTCTACTATACTCTATCACGGTGCCTTCTTTA
CTAAAGAACTGGAGGCATTACGTGAACTGCCCAATAGTCGTCATGAGGTT
TGCTCAAAATACAGGCCACAATGTAAAGCATATAAAGCTGTGTGTTGTCC
CGCTGACATGAATCCTGCTAACCGCCTAGGATTAGATTTATTCATCTCAA
GTATAAGATAAAACGTCTGATAATCGCATTAAAGTATAGAACTGCAGCAC
TGGGTTTGTTGTTGATACTAATCTCAGAGAGAACAGATATGATTCGGGGG
GGCGAGGAAAAGGCTGCGTTCCTGTGTCAAAAATCTCATGTTGGAGTTAC
ATCATGCACACGTATCCCTAAAATACTGAATACATGATAATATAGGGCAG
TGGCCAGAAAAAGGTACACTCTGACCCCGTTCGATCATTTCAAGCCAAGG
CGAAGGGTGGCTGTTGTTTGCTCCCATGCGCTCTGCCAATGTAATCGTAA
ATGACGATCGACGGGTTACGGCAAGCGCTAAGAGTGGGTGTTCAACGCGC
TCTAACAACGCAATTAGGTCAGATGCAATCTCTGCCACCACATACATGCC
TCTGACAATACGACTAGGTCAGATCGAACCAGGTTAGTAAGTGGATGTCT
TTAGTTCTCTTCATGAGACGTGAAATAGAATTACCCGTTTGTAGAGATTA
TTTAAAATCTCCATTCAGAATCGATCAAAGTAACAACCCCAGGCAAGAAA
AGGAGAAGCCTAACCTGTTAGCAAAAGAAAGACTACACCTTCTACAAGTG
CCGCCAACCCAAGTGACTTCGAATTTGCAGTAAGAGTGAGCATACACGTG
ACGATTACCTTTAATTCTTCGCGGGGAAAGGTGGTGAGGTGGTTGGCCTG
AGAAGTGTTATGTGACCTCCCTAATCGAGCACCGGATGTCGCGAGGTCGT
GAAGCCCACGTACCAATGTATACCTTATTGTGGCCATTGACCCAACATGC
AATACGTAGGGGTAGTGATGGCCATCTCGGCCTAGCGTTCATACCAAAAA
AGTTTTCCAGCCGATTCCCATCTGCAGTCAGTAATCCCCATGCTGAAAAG
ACAGGGGTGAATCGACGCATATGACACAATTAAAAGGATGAAATGGCGCT
GCTGCTCAAACTGACAGTCCACTACCGGCAGCAAATAAAGCACAGACTGA
AGTAGTTCGACGTGCTTCTGGCCCACAATAACTGCAATGATCGAGAGACC
ACGGTATGCATTTTTATGACTACTGATGGAGGAACAACTTGCGTTTGGCT
ACATGCCTTCTTGAACAAATTTGAGCTTGATCGCACCGTTTTAGCGCACA
AAAGAGCTGACGCGTGTCACCTAAAAGTACTGGGGGAGCAGGCGGGGGGT
TAATCTGGCCACGGTTAGTTGAACTGCAGCTCTGAAGCTCGAATAATAAC
CCCATCATACCCAGTTAAGGTTATATAGCCTTATTTGAATTTCGGTAGTG
GACACTTATCAGCAAAAATAGTTCAGAAAGGGGGGGAAGGGAGACACAGT
ACCCCGATGGTATCAGACGGTAGAGTCATTTTCCATCCCTTGGTTTCCGA
AACAAGAACTCTTCTGGGCCACAACTAGCGCAACGCTGATGCGAATGCGT
TGTCATGTGACACAGAACGATAAATTAATTATTGTGGTGTGCGATATGGA
TTCGCTTTTTTGCAGGGTTCTACACTTGTCCGGCACACCGTTACTGGCCA
GTGGCTGGTTGGCCCGGGTCGATTTTGCTGCCGACAAGATCGGCCAGCTC
AGCTAGCCACCGAACAAGGGTAGAATTTTCTTGTATTTTCGTGGTTGTTT
CAGGTCGTTGGCGACAAAGTACTCGGCACACACAAAAAAACGAGCCGAAG
AAGTTTCATACAAATGGAAAATTATACGTCCAACACTCCTAACACTACTG
TCAGTCGTGTCGCTATTGATATTGTGCATATGTAGACGCTACCGCCGCCG
CCGCTGACTACCGAGTAGACCGCATCTAACGACCTCCGGAAGACAAAACA
TTTGGATGTAACCCTGTAGCCCCCACTTGGTCGGTACTACTTGGCGTTTT
GACCAAAACCTTCTTTTTTTTTTTTTGTAGTTTTCATGGTATTTTTTTTC
TTGACAAATATTGAGACAATTTCTCAACAGAAATGCAGCGAGCTGCATCA
CAAGCAGCGTTCAACTAAAAACAAAAAGACTCCATCTATTCTTCGATGGA
CCAGATTTTTATTTCAGTTGATTGCATCATGACTATACGAAGACAGTTGG
TTGACATGAAAATTAAAAAATTATTCACCTTGGACAAAGCGGATAATTGG
CGTATTCGCCACAAAAAAAAGAAGAAAAAAGTGCTCGTCTGAGTTATAGA
ATGAGCTTGTGTATTCTATGTGCCCCGGACCATCCACGACTGTTAATAAT
ACTCTCAAGTATAATGGACAGGGGTGTGGTGGGTACGTCGATTTTTGTGT
CCGCTTATTCTGAAACTCGGGCGAATTCATTTAAATCTCGTGGCGAATAC
TCCAATTATTCTTACCTGACCGGGGGATGAAAGTATTTGCTCAAAGGTTC
AGCATGAGTACGTAAATTATATCATATGCCCCGGATTTATCTGTTTCCGT
TTTTCCCTATTGATGGAATACACTGAAAAAACAGGCGGTGGTGAACGCTT
GAAAATTCCAGCGGCTCGATATTGCGTTTTCGTTTTTAGGAATAGATGAA
ATCGCCTTCGAAAGGCGAGCACTTTTAAGACAAAAACGGTTGTAGAAGCA
CTACAATAAAGCGAAACATCGTGGGTGCAACATCTAGGCTTTAGTCAATA
CACTGTTATCGTCACGGTAATTTTTCGCGGCATTCAGAAATCGGTGTACC
GTAATAGAGTACCTTGCACTGTATTTTTAGGATAACATGATCGGCACTTG
AACTTCGCTAAAACTATCGACAAGATGTCATTCCCACAGAGTGGATCTTT
ATCGCAACACTTCGATAACCGTGTTCTTCTTGGTGGTTCTTCTTTTGTAT
CTAGTTCCGCAAGTTCCGAGAAACGTTACCGTGCAATACAAAGAACATCC
CTGGAAATATATATGTGCTCATGCGTCCAACACGAACGATTACAATCACG
ATCGGTCCCTTTCCTGACAAAAACAGTTACATGTAGAAAATATACAGTTG
GAACAACGGTCCTATAAGAACACCCCGTAAAACAAGCAAGAACCCCCGTC
TCGACGGGGGGGTATATGCCTCTCAGTGCCAACCCCGAACTACTTCAACA
ATTTCCAGCCGAGAGGCGTATACCCTCCCCCCCCCAACCCCCAAGGGGGG
TTCGTGCTTGTTTCGAGGGTGCTCGCACCGTTGTTCCAAATTTTTAATTT
TCCTAAACATAGACGTTTTTATCAGGAAAGGGACCGTTTACAACCGTTTC
TGTCGTTTGGGCTTTCTTTTTTTATTGTCTTGGCAAATATCCCGCAAGTA
TTTGTGTTCGTTCCGCACCAAGGGCTCCTTCACTCGAGCTCAAGGAAATT
TACAGCCGTGCTTTTCCCCCCACGGAATGTCCATCTGTCGTGGTATTTTC
CAAAATGCAACATTCGCAACTATAATTTTACAGAGGAGGCCCCTAATGAA
TCTACAGGGTCAGGACGTATTAGTGGCAGGATATAATTATGGCTTGGGGC
ACAGCGGTGACTTAGCTGGCGGTGTACTACTACGGTATAGGTGGTGCACG
AAATAGCATCAGGCAGAAATAGTGGACATCATATCTTCGTGCTGAGTGAA
CTCGTATGATGCAGGGATACATGAGAGCAGCAGTCCCCTGATTTAGTACA
TCCGTTATTGACTGTCTGTGTGTAGGACATAGAAATCAATTAGCCGTCGC
CGCAGCAGCAGCTGTAGTACTGCCGCGCACACCAACCACCCAGGCAATAT
CTGACCAAGTCGTAGAGATCTTATCTCAACCTTGAGCTATTAATGGCTGG
CTGGTACGACAAGAACGACCAGCGAGCAATACACTGCTGTTCGTGACTAG
GGTTTGCCTCCTCTCTCTGTGCCCCAAGACAAGCCAAGACACATGTACAA
AGGGGTGTGGGATATGCATGCATGCAAAGGTCATTTTGTTTGGTCCATGT
TTTGTTTATATATATTTTTTCACGTGTTTTTTACTCCTCGAACAAAAGCA
GAAGGAGGCGAGGATGATGATGACAGCGACGGGAGCGTGCGTGATTTCCG
CAAGCGGATGCGTCGGAAGCGTGACAAAGACCGCGCGGCAGCGGCGGGAT
CGGCAACAGGCAATGGTTCTACGGTCGAAAATGAAGAACAGGGAAAAGGA
GAAGGAGAGGGAGAGGGAGAAGAACAAGAATTCGTTTCAGACGGGACCTA
CCGAAATAAGCAAAGGGTTTTGTTGTTCTCGTCGCGCGGAATAACGTCGA
GGTTCAGGCACCTGTTGACGGACTTGCGCAAACTTATTCCTCATCACAAG
AAGGTGCGTCTGTCGTGTGTCTTGTGAGTTGTCTCGAGGTGTGGAGGTGT
GGAGGTATTTGTGTCGTGCCTTCTTCGCCCATTTGTTCACTCATCTGTTT
TTGCCTCTATCTGACAGTTGTTTCACCCCCCCTCCCCCCCCCCTGCACGC
GCGCGAGATGAAGACGAATACTTGAAATGGTTGAAACGAAAGTATGACAA
GTGACTTGCTCCAAGGTTGAGCATGAGCACGTTTCATTTTTTTTTTTTTT
TCATGTGTCCTGGACTACCATCTATCTTCGATCACGACGAATACTCTTTA
TAAAAAAAATTAAAAATCATGGGCGAAAAGAACACCTGATAATTTTCATG
TGCCTGCACATGTTGAAACATGACCGATTAAAATATATATATTTTCCTCT
AAACAGCCGTTTAAAATACTCGCATATGTCCGGCGGGGGGGGGGGGGGAT
GCAGTCATGAATATATATATATTCAAAATAGAACTTAAGGTATGGGAGGT
ATGCGTTCACCGGATTGTGTGTTTTTTTATGTATGAATGCAGAGGTCATC
CATAACGCCTGTACGCTCGCAAGCACACGATCTCCACGAAGATTCTTCTT
CTTGAAAGTTACTTCAGCACAGGATTGAAAAACTGTTCCGGAACGACACG
ACGACAGTGACCTCGCCGGTATTTACTGGTGTTGATGATGCAGGATGTTA
AGCTTGACGTGGGGCGCGGCGAGAGCCTGTCCAGTGCCGTCAACGAGATC
GCCGAGATCAAGAGCTGTAACTCTTGTGTGTTCTTCGAGTGCCGCAAGCG
GACAGACCTGTACCTGTGGGCAGGCAGGGCTCCTGATGGCCCCTCCGCGA
AGTAAGTACGATGGCGATTACTACTTTCGAGCCCGCCCTGCAAAAAAGAA
AATAAATATCGGCGCGAAGATGAAGCATCGCATTGTCTTCATGTATCCAG
ACAAGAGATTTTTCGTATATTTTTGATTTCAAGGTGGTGCTTTCGGCGTG
TTCTTCCCTCTGCTCCCTGTCCCCTCTCCCCCCCTTGAATCGGGGTACCC
ACGGTGTAGTAGGGTCAAGTTCCTTTTTTTCCATCCTAAAGTATATACTC
TAACCAAGTGGCTATGGGCCAAGGAAATTGATCAATCGAGTACTCTATCA
TATAGTTAATATCTGACAAAACACAGGGAATAGAGATTGTGCGAAAATAG
TGAGCCTGAAAAAGGTGCGCTTTGATGGGAGTCTCTTGTGACTGTAGTGT
GTATAAAAGAGCTGTTCTGAACCGATTATTGCCTTTTGTCGTATATACCG
TACGTGGTGCCTCACGAGAAGTAAGTGAAGAGCTTACGGGCCATCTGCCC
AGCCAAAAAGTGGAATAATGGGCATTTTGCTGCCCAGGTCGTTGCGGGGA
AGAAGACAGGTCGATTTTGAGTTTATCACATGATGAGCTTTTTCGTGTCC
AAACCAATTAAAATCACCGGCTTCTGGACAACATCCAACCAAACTAATAA
AAAAAAACAGGTTTCATGTTTTGAATGTGCATACCATGGACGAGCTGAAG
CTGACGGGCAACTGCATGCTGGGATCGCGACCCCTCCTCAACTTCGACTC
CAAGTTCGACCAGACGCCCCACTGGAAGTGAGTTATTATCCATATCTCGT
GGCTCATTTGTTGTTTTTGTTGTTGTTGTTGTTGTTGCTATTTTTATCGT
TGCCATCATCATCACCACCACTGTTACTATTACTATATCTTCTTAGTTGT
TATCCTGTTGTTACTATCCCCCACACGGTGTACAGTAGTCAAGTATAGAT
GACGCTTTCGAGTCAAGCTACGGTGGGGAGTTTGCCGAGCAGCTATTTTC
ACATTTTGAGCCACTTTGGGGAGCGGTCCGGCACCATCTCTTCTTCCCCT
TGAACAGTACGGTTGTTCCATATCGGGCATTGTTCGCCTCACTGTGTACT
GTGTACTGTGTACTGTGTACTGTGTACTGCACTGTGACGACCTCTGCATT
CATTCTTGGAGCCTTTCAGCACCTGACTAGAGTTACTGAAAAAGCGTCTC
GGTATGTTGCCTGTCGAGCGCCTGGCGACGAACGAGAGAGGCCTCAAGTT
CAATGTAAGCTATAGAGTAATGCTTGTTACTGGCGTCCCTACCATAGAAC
CCTGAGCTATGGAGTTATTACACCGGGGTGCGAACGTTTTTGAAACCCGA
CCGTTTCGAGAAGGGAGACATATCGCTGTCGGAAGAACCCGCCAATCGAC
GTACGTGTAGGGTATATTTCTATGTACGATGTTTGACTGTATCACTGTGT
ACTGCATCGTATCATTGACTATCGTGGCTTTATTGCATTGTAGTGTGCTA
TATCACGCCTGACTACACTGGATTGGACTGGAGCGCATACATGAACTAAT
GTGGTAGCTTGTACTTGTATACATAAATAAATACACAAATAAAATACTGA
CGATACCATAGCGTGTAAAAATATGGAGTGTTCAGTCAAGAAATGACCAA
CAAATTCCGGGACAAAATGCAACTCTACGTCTAACAATGCAACAAGATGA
CGCCAAAACAGGTAAAACGCGCGCGAAGTGTCAAAGGAGTTGAATGGCCA
TCAAAACGCTGAGAAAACAACACTGCAAAGATAGCTCGCAATGCTCTGCA
CGAGCCAGCCGTACACGTTTGCGATTCGACGTTTTTTTTTTTTAAACGTT
TCATTCGATATATAACCCCGTCATATCTTTCTAACGGGATTGTATTCGTT
GTCATAAGCGCCGTGGTTCTCGAGGTGATCAACCGCGCTTGAAAAATCGT
TCGCGCCTCGTTGTGATACCTGTGGGTTTCACGGTAGTCAAACCACAGCC
ACGTTCGTGCAGTCATTCTCATGTGTCTGGTCCTCGATCGACGCACAGCT
GTGCTCCGCGCTCTTAAAGGACAGTAGTTGGACATGTAGTGCCGGCAAAT
ATTTTCTTTTTTTAGAAGAGACGTGTGGATGAGCTGGAGTAGATATACTA
CAAGGGTTGGTTTCTCTATGCATATCCCGGAAGAAGGATGACTTGGCAGT
GTTGTGGAGTTGTTAAAGAATTGTTTTTTCATTCTCGGTACGATTTTTTT
GTTAGTTCGTCTACTTTTTGTACTATCACTCTTTTAGAAAGTCGTTTCAA
CGTTTTTTCCAGGGCGTAACACCTTCGACAAACCACCTTTTTCGGCAGTA
GTGGACAGGGGAGGGTACAGGCATGGGTTCCTACTGGAGGGAAAGCGTGA
AAACTGTCAAGTATGAGCATTTATCCGAATCTTACTGTAGGTAATACACC
TTTTTGCCCTTCCTCGGTCGCTGAATGACTCAGGGTATTGAAGGGGATCT
TGACAGACATCTTCAACACACCGAGGGGACACCCTAAGAGCAAGCCGTTC
ATCGACAGGATCATGGTGAGATCACGCACACGAAAATGATGGCGTTTTTT
TTTGTTTTTTTTTGTCTCTGAAATTTTAGAAGAATCGTGGCGCTTTTTTA
TTCAAATTTTCTTGGTAAGGTCGGGATTGAAAACGATTTTGACTCGAGAA
AAAAAACAAAACTAACGATAATTTTAAAGTATTTCTCGATACTCGAAACA
TGTATCTGATATATGTCATGCACAGGATCAAAGTTGAGATATTTGGCCCC
GCGTTACTCAATGGGTGGAATTTGTATGGGAGAAAAAGTCACTGTGTAGG
ACTCAGCGAGTCCGTTTTTTTTTTCACGCATAATGAAGTTGTTCACCCCC
CCGACGACGAGTACTATTTGCGACTTTTATAAAAAGAACTAGTCGTCTGA
GTTTTAGAATGTGCCGGATGGATGATGACATATAATAAATCGTTTCACCC
TTTATTTTCTTTTTGCTCTAAAATAGTCATGAACAATCCTCTAGCCATTC
GGGGGTGGACTTTACACCTGTTGTCAGGGTGCTCAATTAATCTTGTTTCA
ACGAGTTTAGATATACCACCGTCCGTAACCCTTTAATTTCAGCGGCACTG
GGGGCATCCCGTTGTCCTTAACCCATGACTGAGAGCTTTGTTTATATACT
CCGGAGTACTTGATCAACATGTATAACGGCTTCTGCAATGAAGATCGCAA
ATGAGTCGCGCTGAAGGGTTAAACCAGGATAGAACATGAAGCTCCTTGGT
TCTTTCTTCTCGTTTTTTTTTTCACGATATACCGTGTGTATACGCCCGCA
ATGCTTTATGTTGCAGCCGATGCTGTCTTGAGCTTGAGCTCTTGGGGTGC
CGGGGGGGAGGGTCGGGTTTTTGTGGGTCAAGGTCGCTTGAAATGTTTTT
TGTTTTTGTTTTACCTCGAGATTTTCGAAATTATAATATATATATATATT
AATGCATACCTACTACTGTGTTTAACCCTGTTTCAAGTTTTTGTGCGATT
CTTCTAACATAATATCAGCGTGTTATGGGCAAAGGGGGAAAAGAGAGAGA
GAGCGATAAGAGCTAGAAGAAATGGGAATAAACACCCCCCGTTTAGAACG
CCCCATAGCGGTACATACTAAGGTGGTAATAATTCAAAGGATACTTTTGG
TGTCCAATGCCTGGTACCTGACAGCAATGGTGCCGTGCGTTAGCCAGTAG
TTGTTCATGTGTCGTGCCACGCCACGAGGCGGGCTGATAGGTTAGGGAGG
GTTTTTGCAAGTTTGGACATGTTCTTATATCTAATATAAGAACATGCGCG
TAATGCGGTTTGACACCTCTCCTGGTGGTGCAGCAGTCCAGGTATTGCTT
CCATTTCAAGTGGCGTGAGCAGTCTTCGACGTTAATCATGAACAGGGTCA
AATTGTAGATGGTATATCGTTCGATCGTGGTGTGTATTGTCCCCTTCCAC
TGTTTTGAGATTTTCGTTTTTTATGGGTGTGTGATGAATCAATAGATTCT
AATTTTTAACTGATGCATTAAATTCAGCCCAGCAAAAAGTTGAAGGGTTT
TATTATGATCAGCGTAAAACTTCAAATAAATATGACCAAGTTTTGGATAA
ACAAAGAAAAATGATTTATTATTTAAGGGAAAGAGTATTATATACTCTTG
TAATGCGTGGTTTATATATAGAATATAATAATCGGGAAGGTAAAAATATC
ATATTAACAAAAAGAATTAGTCGATTATTAAATCGTTTATCAATTTCTAG
GGAAATGGTTTATAATAGTTTGAATAAGCTAATATGTAGGCCTGTGATTC
AGGGGCACCATTCTCACGTAGACAATTTCAGCATGCTATGATGGTGCACG
CCACAGGCGTTTTTGACGTCCCAGTTTGATATCATACGATTGAAGGTTTC
TTGCGAAGCCGTGCGAGTGAGACGTTATATACTCGATCAACTTGTGCTGT
GCTGTCTGCAGTAAAGATCTTAGACAAGAATGAACCTCGTTGGAAGGGTA
AAGCAATGGGAGGCTTGCTTACCACCGTCTCTCGGAGAATACCATAGTTG
ATGTAACATTCATCTTCGTCGAAATCGGGTGCGGGTGCGGGTAAACCTGA
GAGTACTACTCTAACCTCCAACACCGTAGCCCTTCGTGGGTCAAGTCCTG
TTCCGGTAGCGTCTATTAGATCGGCCAAACGCCGCTCCGCGGCGTTCGAA
TTACCTTCGAGCCAGGTTCGTGGATAGGCCGGACAGTACACCACAGTAAA
CCTATGTACTGCAAAGAACATGGGCTTATTCGACAATGGTAAAATGTACT
ACCGAGTAATGATCATGTTATGAAATTAATCCGATGCATCCACTGAGTGT
TGCACCCAGGTTCGAGGCTACCGTCATGACCCCTTTTTGATTTAGTTGTG
CAGATAAATGTATACTCCAAATGAAGATTATAATTAACTACATAACCTGA
GCATGAGTTTGATGGAGTTATGATCCGAAGTTCGGAGTTATAGTTCAGCT
GGCTGTGGCCGGGTAAACTTAGCAGTGTCATAACTGCTGACACACCGCTG
CCCACCACTTGCGATAGAGACGCATTTGAATCCTGCTGTTGCGACAAGAA
TATTAAAGCGGTTCTAAAAGATATAGTTTGGCCTGAAGGTGCGATCGTTG
AGGTAGATATGGTAGATGAAATATCTCACCCCCGGACAAATACGAGTACT
TGCAAATGGTTTCCATCAAAAGCAAAAGGTGTTCGCCTGAGTTTCGGAAT
GAGCTCGTGTGTTCTGTTTGCCCCGGACCATCCACGACTCTCCTAATAAT
AATCGTAGATCGAATGGACAGGGGTAGGTGCTTTATTGTGTGTGTACGCT
CATTCTGAAACCCGGGCGAATACTTACCAGTTTTTCGTGGACACCATTTA
CAAGTATTCGTATTTGTCCGGGAGGTGAAATATTTTCCAGCCACAGTTGA
TTTGATTGGCCACAGGGAATCGCTCTGATTAGAATAAAGCTCCGTCCTCT
CGAAGACGCGTAATCAATGGCCTAACAACCACAACATACACATACAAAAC
ATGAGTACTCCCTCCCCTCCCCCCGTTCCTGCCCGACCACCGTCCTTCTT
TTCGTCTTGTTTCAGTCGTTCTTCGTGGCAGATGGCAAGATATGGGTGCG
GAACTACCAGATCGTTGACAAAGGTGACGGTACCGATTCATCCCTGAATC
GCAAGATTGAGAAGGGGCAGCCGGGGGCGGCGGGAGTGGGGGGAGTGGGG
GGAGTAGACCCCCTGAGCCTCGTGGAGATGGGGCCGCGCTTCGTGCTGAA
TCCCATTCGCGTGTTTGCGGGGTCGTTCGGGGGTCCCACGTTGTACCACA
ACGGGGCGTACGTATCTCCGAACGACGCGCGCGCGCTGAAGAAGCGCAGG
GCTGGGTTCAAATATGAGGATAGGCAAGAATCCAAGAAGTCGGTCAAGGA
GAAGAAGGCGGAGCCGGCAGTGCCTCGCGGGCCGCTGGATGACGTGTTTC
AATAAGAACAATAATGGAAGCCGAAACGTTTTTTTCGTTCTTGGAGGGGG
GTTGTGAGAAAGCTGAGGTTGCGTATGTGTTGCCCGTAATCATGGCTCGG
CTATAGATACTGGGAAGCTACTCGTACCGTAAATTACTCCTGTTGTATCC
GTTCCTTAGCTGGTCCACCATATTGACGAGGAATCTTTGTTCCGTCGGTA
CCTACTGTTTTTTTTTTTCTGGTGTCGAGGTTTTGGCGTAGGTCTATCAC
TGTTTTCCATGTCGTGGAAGTCTGGGGACCCGGGAGTTTGGAGTAGATCA
GGTACCCGAACTCTGGTTGAGATGTGAAGCTGTGCGACGATATAGTAGCT
ATTTTGATGACTACGTCGGTGTGGACAACACGAATTGTGCGGCTTTCCCC
CCACCCTTCTTTCCGTTGGTTGTCGTGTTAGCTAGGACAGGACCAGCTAG
CTGTGGACCTATTTTGATCGTTTTACTGTCTTGCAGCGAAACGACCGCAC
ACAATTCACTGGGGCGTCGTCACGAATGTTTTCTGTCGATGGAAATGAAC
GGCATGATGCTGTATCGTATCAGTGTCTTGCAAGATTAGGGACACAATTG
GGAATCGTTTGACCATGTGGGGTTTCCATAAGATTTTCGATATTTTAAGG
TCCTCTTCGGAATGAAACGCGGTGGTACAGGTTTAAAAGACGGCGTCGAT
GAGCCGAAAAACGTTTTCGAGAATCTTAATACTCTCGCATTTGACATCAG
AGAAGATTATCTTAAATATAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig5386:905..13825+ >mRNA_H-paniculata_contig5386.12814.1 ID=mRNA_H-paniculata_contig5386.12814.1|Name=mRNA_H-paniculata_contig5386.12814.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2850bp|location=Sequence derived from alignment at H-paniculata_contig5386:905..13825+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCCGAAAGCGTACAAGGCAAGAGGAAATTTCTCCTAAAGCTGGTGA
TGGATCTAGGAAATCAGCAGCTGCGCGGTCATCAGGAACGAAGGTGAAGA
GATCAAGCAAGGGGAATCGAGTAGCACCTCAAGTGGTAAGTTCGGATGCT
GGCCGCGCAAATGGGCCTGCTGTTGTTGCTGCTGCTTCTGCTGCTGTTCC
CGCGACTGGTGTCGAGGTAACAGCAACAAGTAATAACCAGGAGAACGACA
TGTCAGAGGATGAAGGAGTTGGGGATGGGAATCAGAGAAATGAGGAGAAA
GAGGAAGGGTCGAGCAACGACGGGTCTGAAGAGGAAAACGACAGCGACAG
CGACGATGACAATGATGATGATGATGATGGCCCGAAAGCGTACAAGGCAA
GAGGAAATTTCTCCTAAAGCTGGTGATGGATCTAGGAAATCAGCAGCTGC
GCGGTCATCAGGAACGAAGGTGAAGAGATCAAGCAAGGGGAATCGAGTAG
CACCTCAAGTGGTAAGTTCGGATGCTGGCCGCGCAAATGGGCCTGCTGTT
GTTGCTGCTGCTTCTGCTGCTGTTCCCGCGACTGGTGTCGAGGTAACAGC
AACAAGTAATAACCAGGAGAACGACATGTCAGAGGATGAAGGAGTTGGGG
ATGGGAATCAGAGAAATGAGGAGAAAGAGGAAGGGTCGAGCAACGACGGG
TCTGAAGAGGAAAACGACAGCGACAGCGACGATGACAATGATGATGATGA
TGAAGGAGGCGAGGATGATGATGACAGCGACGGGAGCGTGCGTGATTTCC
GCAAGCGGATGCGTCGGAAGCGTGACAAAGACCGCGCGGCAGCGGCGGGA
TCGGCAACAGGCAATGGTTCTACGGTCGAAAATGAAGAACAGGGAAAAGG
AGAAGGAGAGGGAGAGGGAGAAGAACAAGAATTCGTTTCAGACGGGACCT
ACCGAAATAAGCAAAGGGTTTTGTTGTTCTCGTCGCGCGGAATAACGTCG
AGGTTCAGGCACCTGTTGACGGACTTGCGCAAACTTATTCCTCATCACAA
GAAGAAGGAGGCGAGGATGATGATGACAGCGACGGGAGCGTGCGTGATTT
CCGCAAGCGGATGCGTCGGAAGCGTGACAAAGACCGCGCGGCAGCGGCGG
GATCGGCAACAGGCAATGGTTCTACGGTCGAAAATGAAGAACAGGGAAAA
GGAGAAGGAGAGGGAGAGGGAGAAGAACAAGAATTCGTTTCAGACGGGAC
CTACCGAAATAAGCAAAGGGTTTTGTTGTTCTCGTCGCGCGGAATAACGT
CGAGGTTCAGGCACCTGTTGACGGACTTGCGCAAACTTATTCCTCATCAC
AAGAAGGATGTTAAGCTTGACGTGGGGCGCGGCGAGAGCCTGTCCAGTGC
CGTCAACGAGATCGCCGAGATCAAGAGCTGTAACTCTTGTGTGTTCTTCG
AGTGCCGCAAGCGGACAGACCTGTACCTGTGGGCAGGCAGGGCTCCTGAT
GGCCCCTCCGCGAAGATGTTAAGCTTGACGTGGGGCGCGGCGAGAGCCTG
TCCAGTGCCGTCAACGAGATCGCCGAGATCAAGAGCTGTAACTCTTGTGT
GTTCTTCGAGTGCCGCAAGCGGACAGACCTGTACCTGTGGGCAGGCAGGG
CTCCTGATGGCCCCTCCGCGAAGTTTCATGTTTTGAATGTGCATACCATG
GACGAGCTGAAGCTGACGGGCAACTGCATGCTGGGATCGCGACCCCTCCT
CAACTTCGACTCCAAGTTCGACCAGACGCCCCACTGGAAGTTTCATGTTT
TGAATGTGCATACCATGGACGAGCTGAAGCTGACGGGCAACTGCATGCTG
GGATCGCGACCCCTCCTCAACTTCGACTCCAAGTTCGACCAGACGCCCCA
CTGGAAGGTATTGAAGGGGATCTTGACAGACATCTTCAACACACCGAGGG
GACACCCTAAGAGCAAGCCGTTCATCGACAGGATCATGGGTATTGAAGGG
GATCTTGACAGACATCTTCAACACACCGAGGGGACACCCTAAGAGCAAGC
CGTTCATCGACAGGATCATGTCGTTCTTCGTGGCAGATGGCAAGATATGG
GTGCGGAACTACCAGATCGTTGACAAAGGTGACGGTACCGATTCATCCCT
GAATCGCAAGATTGAGAAGGGGCAGCCGGGGGCGGCGGGAGTGGGGGGAG
TGGGGGGAGTAGACCCCCTGAGCCTCGTGGAGATGGGGCCGCGCTTCGTG
CTGAATCCCATTCGCGTGTTTGCGGGGTCGTTCGGGGGTCCCACGTTGTA
CCACAACGGGGCGTACGTATCTCCGAACGACGCGCGCGCGCTGAAGAAGC
GCAGGGCTGGGTTCAAATATGAGGATAGGCAAGAATCCAAGAAGTCGGTC
AAGGAGAAGAAGGCGGAGCCGGCAGTGCCTCGCGGGCCGCTGGATGACGT
GTTTCAATAATCGTTCTTCGTGGCAGATGGCAAGATATGGGTGCGGAACT
ACCAGATCGTTGACAAAGGTGACGGTACCGATTCATCCCTGAATCGCAAG
ATTGAGAAGGGGCAGCCGGGGGCGGCGGGAGTGGGGGGAGTGGGGGGAGT
AGACCCCCTGAGCCTCGTGGAGATGGGGCCGCGCTTCGTGCTGAATCCCA
TTCGCGTGTTTGCGGGGTCGTTCGGGGGTCCCACGTTGTACCACAACGGG
GCGTACGTATCTCCGAACGACGCGCGCGCGCTGAAGAAGCGCAGGGCTGG
GTTCAAATATGAGGATAGGCAAGAATCCAAGAAGTCGGTCAAGGAGAAGA
AGGCGGAGCCGGCAGTGCCTCGCGGGCCGCTGGATGACGTGTTTCAATAA back to top
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