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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-15_004680.1 |
| Exons | 5 |
| Model size | 1916 |
| Cds size | 1395 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5378.12804.1 >prot_H-paniculata_contig5378.12804.1 ID=prot_H-paniculata_contig5378.12804.1|Name=mRNA_H-paniculata_contig5378.12804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=465bp
MRRRQVQILQQQQQQQQQQQQQLSQPELIARQHLARQQQQQQQQQQQLRL
RSDHDRQIEVVRQAQIQQQQQLQQQRIEQQRQQELRQRQEQQHLEQQAQI
LRQRQQQQQQQQQRGGYGIEAGQGLPHGGQHVLQSQQQLLRQRQLLQQQQ
QQQQQQQQHHPQQQHMQQHRGGGAIPAGVQSIPANNIQPQQQAVRSVHGG
IAGPSQASVAAVAAAQQRQHGAGGRQGVAGGAHLLSPPGGPVLMQVPGGV
DGVMSRVYGAQPAFVPPLGQQHGAYGQGGHPVSRQRQQQLVQQQGGYPGP
HLQQRMGQHQQQQLSHPSSHPSMQQHAAGGTNSTDAYAAAASRSRADVDL
LSMLGLKNGAPAEQGGAGAGSNAGGYGAGIDGGSGAHQQFAFHEPQPGAR
RMRAVNGGGAMALDPRARTRSRVGAGVGIGAGMGLGRKLPGGGGGGGGGG
AMSAEDMERIVTGS* back to topmRNA from alignment at H-paniculata_contig5378:235..6163+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5378.12804.1 ID=mRNA_H-paniculata_contig5378.12804.1|Name=mRNA_H-paniculata_contig5378.12804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5929bp|location=Sequence derived from alignment at H-paniculata_contig5378:235..6163+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGGCGCTGTCATCGCAGCCGGCGGCGTCGACACACCAGCAGCAACAAAC
ACTACAGCAGCAGCATGGTGGCGTGCTGCAGCAACAAACGGGCAGTGGCA
TTTTGCGACAGCAGCAACAGCAGCAGCCCCCTCGTGTAGCCTCGCCGCTG
CCGCTTTCCCCCCCTCAGCAAACTGTAGCTACTGCGAGCGGCGTCGGCGG
CAGCGTCGGCGGTGGTCCTTCGCTGCTTCAGCAGCCGCCGCAGCAGCCGC
AAAAGCAACAGCAGTTGCCGGGGGCAAGCGCGTTTGGGGGCACGCTGGCA
TTCCCGGTGGCACAAGGGTCGGTGTTGGTAGGAGGTTTGGCGAGCAATGG
TAGCGTTGGGGCTGGTGGTGGCGGCGGGGGGCAGGCGCGAGGGGGGGGCA
TTGGAGCGGAGATAGCGGTTGAGCAAATGCGGCGGCGGCAGGTGTGTGTA
GCATTATGCGTGTTGTGTGTGGACGTTCTTTGTTTCAAAAGTAAAGGTGG
TTATGACGGTGTCACTTAAACTATCTTCGTTTTTTTTTTTTTTTCAAATA
TAGCCTCGGTGCAAAAAAAGTACTCGACCAATTAAGGCCTATTTCCCCCC
CTGTTTAGTATTTCCCAATGGGACAACGTGGAAATCGTTAAAGGAACAAA
CAGATTGAAAATGGTGAAAAATAAGCCTAACCTTGAGCAGCCATTAGTCC
TTGTACACAAATCGGAAGGTACTTCGGAATAGCGCATATATATGAATCCA
TCAGATTTAACTTCCCGACGAGTTCGATCGCAGCCTCTGAATAATCTTGA
ATCTGGAGAAATATTCTGCCGAACACAAGTGACGTAACTTGTGGCATAAA
GGATCTATGTGAATATCCTCGGTTGTTGTCCTCGTTACTATGTACTGGAA
TGATAATGACGTTCGTCTCGGAAAAAATGCTTTCTCTATCTGAGTGTTTT
TTTCAAGTATTAGGTGATACGGAACCGTTTGATGGGGATGAGGTTTAGTA
GTTGCGACATTGGTGTGTTGAGCCGTTATCGGCCTATGAGTACTCATTGA
ACACGCTATGTGTATGGTCTGTTTAATTTATATGTTTTATGTGTTGTGCT
GGACATGGTGATAGAGGGCGTGCTTGAGCAATTTTTGGTCTCAGCGAATG
TTGTACGAGGACGTGGAATTTTTCGGGGGGCAAACAAAATCGAACACTCC
AGACCTCATTTTCAAGTTTTTGTTCGATTTTGCGCTTTTTTTTTTCTGGT
AGGAATTCGTGTGGGGTTTGTGCACCATCGGGAGGTTCGACAAAGTTCAC
GTAGCCGATCTTTCGTATCGTTACTTGATTGCCATACTGCGGAAGTGTGT
CGCTTGCTGCTTCATGACCGTCATGTTTTTCGTATTCGGGGTGCTTGTCT
ACGGCTTGTCATGATACTTTCTTTCGAGTGCCAGGTGCTCATGTAGATGG
GTAGCCCTACAATTTCTTTTCTCTTGTTTATGTGCGTCTTACGTTCGCAG
GTGCAGATCCTTCAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAACA
ACTGTCTCAGCCGGAGCTGATTGCTCGGCAACACCTGGCGCGCCAGCAGC
AGCAGCAACAACAACAACAGCAGCAATTGCGACTAAGGAGCGATCACGAC
CGGCAGATCGAAGTGGTAAGGCAGGCCCAAATCCAACAGCAGCAGCAGCT
TCAGCAGCAGAGGATTGAGCAGCAGCGACAGCAGGAGCTGCGACAACGGC
AGGAACAACAACATTTAGAGCAACAGGCACAAATATTGCGTCAGAGACAG
CAGCAGCAGCAGCAGCAGCAGCAGCGCGGGGGCTACGGCATTGAGGCAGG
GCAGGGCCTGCCGCATGGCGGCCAACACGTACTCCAGTCGCAACAACAGC
TTTTGAGACAACGACAGCTGCTACAACAGCAACAGCAACAGCAACAGCAA
CAGCAACAACACCATCCCCAACAGCAGCACATGCAGCAGCACAGGGGCGG
GGGGGCAATTCCGGCCGGTGTGCAGTCCATCCCCGCCAACAATATACAAC
CGCAGCAGCAGGCTGTGCGCTCGGTACACGGTGGTATTGCCGGACCTTCT
CAAGCGTCTGTGGCGGCGGTGGCTGCAGCCCAACAGAGGCAGCACGGAGC
CGGCGGGCGCCAGGGAGTAGCTGGCGGTGCGCATTTGCTGAGTCCTCCTG
GAGGACCTGTGCTCATGCAGGTACGGAACACCGAAGTGGTGGCTTGTTAA
GGTCACTGTCTATATCGTAAGGTAGTAATTACTATTTTTAGTATCACGCA
GCGGGAGGGGGGGGGAGGGGGGGTATTTCCGAAAATGCATGAGATGGTCA
GAGAGAGGAGGAGCGAGGGCGGGGAGGGAGGGTTAGTCTTTTTGAGGTTG
TACAGGTGACTTCAAAATTGGGTTGTTTGCGTTCATCAGCAACATGAGAT
TAACCAAGGCGGTCCTTTTTAACACCTGCTGTGTGGTATCTGAATGGATT
TATAGGCGTGTTTTAGACGCATCGCTGGTTTCTTATAGGCAGGCGATGCG
TTGTAGATGTTTTGAAGTCTCTTGCGCTATTCGACTGCATGGGTTATTCG
AAAGGACCCGGGGCGAGAGTTCCCGTAGGGCAAGGTCCTGTGTTGTTAAC
TCGAACTGCTCGATGTCCATGTCTGCTGTTGCAAGTTTTACCCCCGAAAG
TTACGAGTCTGACCGGATGGGAGTTGGGTTTCTGTTGTCCGGTGGCCCTT
AATTTGCTCTACGCTCTTCATTGAAAAGGTTGCGCGGTCTTGAAATGTGT
GTGTATGTGTTCATTCATCACAGGTGCCCGGGGGCGTCGATGGGGTTATG
TCTCGTGTATATGGCGCTCAACCAGCATTTGTTCCGCCTCTGGTAAGGGG
GGTCTTGAAATGCTCTGCCTAGTTTTGGTATTATGCGTAGGGATGGAGCA
TGTCGCCTTTCCGTTTTTTCTATTTCTTTATGGGACAGAGAAAAATGAAT
GATGACCTTGAAATCGTTCGTTTTTTTGCCTCTCTAATCGCGCATGGAAT
TAGTTACGGTGACCTTTGCGATGCTGTCGCGATTGTCAGTGTTGCGTGTC
TTCCTCCTCCCCTCCCATTCCCAATACATGTTGTTGATGTCGTCCCCGGG
GGTTTGGTCTACTTGTACAGGACGATGGTGTTGGGAGTGCCGCGGTTGGA
AGTGTGTGTTGTAGATGGTGGAAACGGGACTTTTACTGGAATAAATGGGG
CCTAGTGTGTTTCTTTATACACAACACGGCGTGGCACGAGAAATATACAT
GTAGACTCGATTTTTTTTTTTTTTTTTCCCGGTTACGGATGGGTGACATC
TTGCTGGTGGTTTTGGTCGAGCGGTGGATACACGCCGTTCACGATCGCCG
GTCGTCTGTTACCTTCGAGGCAGTCCGTTGGTACATAGTGTGTGTGTGTG
CGATAAGCTGGCTTTCGTCACCCGAACCCAAGGAGTTTTTATCAACCCAC
GAAGTCTTTCCGTTTTTTTAATCATTAGACCATCGCCTTTAGTTAGATCC
CGTTCGTCACTCAGCAGGTCCTCACATGAACAAATCACTCTCCCCCATCG
CTGCGCCGCGTGAGGGGATTTTCAGTATCGCCGCGCACGTACGTGTCGAT
ACCAACGTCAAGATAGACCCCATGCATGGTCATGTTCCAATGTTTAGATA
ATGACTGAACATATTCCTGTTCCCTGCTGCCCACCTCCATTTATGTTTCG
CGTGCAAATGCACGAATTGTTTTCGTTGTGTTTTTGCTATCGCTTTCTTT
TTTTCATGTCAATCTTTTTGCGATATTTTAGGGTCAACAACACGGTGCGT
ACGGCCAAGGCGGACATCCCGTCTCTAGGCAGCGGCAGCAGCAGCTTGTG
CAGCAACAGGGCGGATACCCAGGCCCCCATCTCCAGCAAAGAGTGAGTAT
TTGGACTGTGCTGACGTTTTGCAAGGCCGAGGGGGATAAAAAATGAATAG
GCGAAACGGGGGTGGTCGGGGCAACCAAAGTGGTATGGCGGAGCGGCGGG
GGGGCGCGGGCACTCGTTAATTTTCTCGAGGACGACTGCACTAGTAGTAC
GGCTACGGCTACGCTTATGGAGTCTATGTTTTGCTTCTCGTACCCGTTGG
CGTAGTAAGATACCATGATTTGCATACAATGGCTCTCGGTGGGCTAGCCG
CGTGGGTCGCTGTGCTTGCGCGTATGGTAGACGCAATGTCTGTATGGAGA
TGCAGTTTTTGCAAGTTACACGGTATCTAGTTGGAACAATGAAAATATTC
GAAATAAGCATTGCGTCATGGCGTACCCATCAACATGGTCAGGGACGTAC
GAGTAACTTGGAGGCGCTTCTAACGATCGGGTATACTTGTGTTTGTTTTG
TTGACCGCGCGTCCGTGACGGCGCCGTGGCGTGGATGTATTACTTTCGAT
ATCACACGCGGGAGTCGGAAACTATTGACGTTGCGTCCTTGACAATGCCG
GGACGGAGCAATATGGCGCAGTTACTTTCGCCGGCACTGGCTGCGCTTTA
CAAGCGAGATATCCGTTGCTAGCCATCGATCTTCCGTTGTATAAACCCCC
AACCGCATTTGCCGTAGGCTTCACTGCGCATCCCCGGGAACCAAATGTTC
CGCTGTCGACAGGCGTGACTGGATCCTTTCAAGTACAGCAAGTATCGGCA
ACAGCTGTTGATTTTCCCATGCACGCATCGTTCACGCCTCACGCACAGCG
TACACAGCGGTAGGGGCGTGATACACGCGCGATGTTACCTGTGGTTACTA
GGGATGGAACGCGATAATTCGTATTTCCGTTCCAGGGGGTTCCAACTATC
CAGTACGGAATAGACGGACAGCTTACATAAGGGGTGTGGGCCCATTGACC
GAGATCAACAAGCTCACAGATAATACCCCATGAAGTTACAGTATTATTGC
AGCTCCATACCGCAAGAGCCAACGTCAGGAGGGGGAGGGGCGGCGTGTAG
CGAGCTATACCGACTTCAAGCTCCGCTGACGGCATGTGCTGCTTGCTGGG
TTAGTGTGCATCCATACACGAGAAAATTCCAATTTGCATCCTTCAATTAC
GCCGTTTACTGCGTCTGAAACTGGGGCATTTTTCATGTACCACCCTCTAG
GGTATTCAGAAGGATGCCTCCCCGTGTGGAGGAGTTGGGATGGTCCACCG
TCGAAGCCCTTGATAGCCCAACGGGTTAGCCACTGTGCATGAGCAGATCT
ACAAGCGGCCCCTACATGGACCAACCGACGACCAGCACGACACTAACTAG
AAAATTGACCCCCTGTCCGCTGCCCCCTCCCGTGTCGCTTGCTACACACA
ACAGATGGGCCAGCATCAACAGCAACAGCTGTCCCACCCATCGTCGCATC
CCTCCATGCAACAGCACGCTGCCGGCGGCACTAACAGCACCGACGCTTAC
GCAGCCGCCGCGTCCCGAAGCAGGGCGGATGTAGACCTGCTCAGCATGCT
GGGTCTGAAAAATGGGGCTCCCGCTGAGCAGGGGGGCGCGGGCGCCGGCT
CCAACGCGGGGGGGTATGGAGCTGGTATAGACGGGGGCAGCGGGGCACAT
CAGCAATTCGCGTTCCATGAGCCACAGCCTGGTGCCCGGCGGATGAGGGC
TGTTAATGGAGGAGGTGCCATGGCGCTGGATCCCAGGGCACGGACGCGCT
CTCGGGTCGGTGCCGGGGTGGGGATTGGCGCAGGGATGGGGTTGGGGCGA
AAGTTGCCGGGCGGAGGCGGCGGCGGCGGTGGCGGCGGAGCTATGTCTGC
TGAAGACATGGAGAGGATCGTTACGGGGTCTTGAAGTCGTGATAGAGGTC
TGCCGATGTGTCGTGTTTTGCCAGGGCGTCGGTGGGGGTAGTTTGTCGAC
GGCGGCAAGATTCCACGCGCACGGGGAGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5378:235..6163+ >mRNA_H-paniculata_contig5378.12804.1 ID=mRNA_H-paniculata_contig5378.12804.1|Name=mRNA_H-paniculata_contig5378.12804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2790bp|location=Sequence derived from alignment at H-paniculata_contig5378:235..6163+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGCGGCGGCAGATGCGGCGGCGGCAGGTGCAGATCCTTCAGCAGCA
ACAGCAACAGCAACAGCAGCAGCAGCAACAACTGTCTCAGCCGGAGCTGA
TTGCTCGGCAACACCTGGCGCGCCAGCAGCAGCAGCAACAACAACAACAG
CAGCAATTGCGACTAAGGAGCGATCACGACCGGCAGATCGAAGTGGTAAG
GCAGGCCCAAATCCAACAGCAGCAGCAGCTTCAGCAGCAGAGGATTGAGC
AGCAGCGACAGCAGGAGCTGCGACAACGGCAGGAACAACAACATTTAGAG
CAACAGGCACAAATATTGCGTCAGAGACAGCAGCAGCAGCAGCAGCAGCA
GCAGCGCGGGGGCTACGGCATTGAGGCAGGGCAGGGCCTGCCGCATGGCG
GCCAACACGTACTCCAGTCGCAACAACAGCTTTTGAGACAACGACAGCTG
CTACAACAGCAACAGCAACAGCAACAGCAACAGCAACAACACCATCCCCA
ACAGCAGCACATGCAGCAGCACAGGGGCGGGGGGGCAATTCCGGCCGGTG
TGCAGTCCATCCCCGCCAACAATATACAACCGCAGCAGCAGGCTGTGCGC
TCGGTACACGGTGGTATTGCCGGACCTTCTCAAGCGTCTGTGGCGGCGGT
GGCTGCAGCCCAACAGAGGCAGCACGGAGCCGGCGGGCGCCAGGGAGTAG
CTGGCGGTGCGCATTTGCTGAGTCCTCCTGGAGGACCTGTGCTCATGCAG
GTGCAGATCCTTCAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAACA
ACTGTCTCAGCCGGAGCTGATTGCTCGGCAACACCTGGCGCGCCAGCAGC
AGCAGCAACAACAACAACAGCAGCAATTGCGACTAAGGAGCGATCACGAC
CGGCAGATCGAAGTGGTAAGGCAGGCCCAAATCCAACAGCAGCAGCAGCT
TCAGCAGCAGAGGATTGAGCAGCAGCGACAGCAGGAGCTGCGACAACGGC
AGGAACAACAACATTTAGAGCAACAGGCACAAATATTGCGTCAGAGACAG
CAGCAGCAGCAGCAGCAGCAGCAGCGCGGGGGCTACGGCATTGAGGCAGG
GCAGGGCCTGCCGCATGGCGGCCAACACGTACTCCAGTCGCAACAACAGC
TTTTGAGACAACGACAGCTGCTACAACAGCAACAGCAACAGCAACAGCAA
CAGCAACAACACCATCCCCAACAGCAGCACATGCAGCAGCACAGGGGCGG
GGGGGCAATTCCGGCCGGTGTGCAGTCCATCCCCGCCAACAATATACAAC
CGCAGCAGCAGGCTGTGCGCTCGGTACACGGTGGTATTGCCGGACCTTCT
CAAGCGTCTGTGGCGGCGGTGGCTGCAGCCCAACAGAGGCAGCACGGAGC
CGGCGGGCGCCAGGGAGTAGCTGGCGGTGCGCATTTGCTGAGTCCTCCTG
GAGGACCTGTGCTCATGCAGGTGCCCGGGGGCGTCGATGGGGTTATGTCT
CGTGTATATGGCGCTCAACCAGCATTTGTTCCGCCTCTGGTGCCCGGGGG
CGTCGATGGGGTTATGTCTCGTGTATATGGCGCTCAACCAGCATTTGTTC
CGCCTCTGGGTCAACAACACGGTGCGTACGGCCAAGGCGGACATCCCGTC
TCTAGGCAGCGGCAGCAGCAGCTTGTGCAGCAACAGGGCGGATACCCAGG
CCCCCATCTCCAGCAAAGAGGTCAACAACACGGTGCGTACGGCCAAGGCG
GACATCCCGTCTCTAGGCAGCGGCAGCAGCAGCTTGTGCAGCAACAGGGC
GGATACCCAGGCCCCCATCTCCAGCAAAGAATGGGCCAGCATCAACAGCA
ACAGCTGTCCCACCCATCGTCGCATCCCTCCATGCAACAGCACGCTGCCG
GCGGCACTAACAGCACCGACGCTTACGCAGCCGCCGCGTCCCGAAGCAGG
GCGGATGTAGACCTGCTCAGCATGCTGGGTCTGAAAAATGGGGCTCCCGC
TGAGCAGGGGGGCGCGGGCGCCGGCTCCAACGCGGGGGGGTATGGAGCTG
GTATAGACGGGGGCAGCGGGGCACATCAGCAATTCGCGTTCCATGAGCCA
CAGCCTGGTGCCCGGCGGATGAGGGCTGTTAATGGAGGAGGTGCCATGGC
GCTGGATCCCAGGGCACGGACGCGCTCTCGGGTCGGTGCCGGGGTGGGGA
TTGGCGCAGGGATGGGGTTGGGGCGAAAGTTGCCGGGCGGAGGCGGCGGC
GGCGGTGGCGGCGGAGCTATGTCTGCTGAAGACATGGAGAGGATCGTTAC
GGGGTCTTGAATGGGCCAGCATCAACAGCAACAGCTGTCCCACCCATCGT
CGCATCCCTCCATGCAACAGCACGCTGCCGGCGGCACTAACAGCACCGAC
GCTTACGCAGCCGCCGCGTCCCGAAGCAGGGCGGATGTAGACCTGCTCAG
CATGCTGGGTCTGAAAAATGGGGCTCCCGCTGAGCAGGGGGGCGCGGGCG
CCGGCTCCAACGCGGGGGGGTATGGAGCTGGTATAGACGGGGGCAGCGGG
GCACATCAGCAATTCGCGTTCCATGAGCCACAGCCTGGTGCCCGGCGGAT
GAGGGCTGTTAATGGAGGAGGTGCCATGGCGCTGGATCCCAGGGCACGGA
CGCGCTCTCGGGTCGGTGCCGGGGTGGGGATTGGCGCAGGGATGGGGTTG
GGGCGAAAGTTGCCGGGCGGAGGCGGCGGCGGCGGTGGCGGCGGAGCTAT
GTCTGCTGAAGACATGGAGAGGATCGTTACGGGGTCTTGA back to top
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