mRNA_H-paniculata_contig536.12780.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: D7FNH7_ECTSI (Tetracycline-efflux transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH7_ECTSI) HSP 1 Score: 401 bits (1031), Expect = 2.380e-123 Identity = 229/474 (48.31%), Postives = 290/474 (61.18%), Query Frame = 2
Query: 173 RVSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGGSLSENKKILACVICGSFMLSALLSLRLLGWKETAP-----GSRRRRYSDLRNQGELE------------GGNESFSG---------------------------GIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYNYFDYRFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAEGSAALVFVQVFAAGSSAGFPEAPFYLAAGVSLIGLVTAWSPLRKRNK 1462
+++ CI LYT G+S +TQ+ PK++L GDD +ASK+ GWL VSV+Q F+PA+SG SD VGR+AV+ A +LH V LA D+L VC + VI PV QA+MID++ D A+HGLG+ A S GDI GGSL+E+ + AC++ +F ++LLSL L GW+ETAP G +R + + Q ++ G N G G A R R + LN +S+LKVFLESR LLRIA SYF F++SLNVF GYNY DYRF WTP EIS+FFA YN +ALA W IR +VP+R++EE G LFGIS+QV S ++ GLC +GWMLYPAL FG LQ +TEPCLQAIMA FV + QG LQGAVMSLRV+ EG AA VF QVF+AG+S GF EAPF+LA +SL+ L AW PLRK +K
Sbjct: 75 KLTACILLYTIGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRG----KGATHGLGIAFGASALGFSAGDIIGGSLTEHHRGAACLVSAAFSAASLLSLALFGWRETAPPLVGEGWQRWLWWRVEEQERIDDAVVGMNDDDDVGANRGICGRDVAAVVQGGDAVEATASVDSFVWDDDGKQGAGGRGRARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVMVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLVSLAVAWWPLRKLDK 544
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: D7FNH6_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH6_ECTSI) HSP 1 Score: 327 bits (839), Expect = 7.800e-97 Identity = 226/618 (36.57%), Postives = 326/618 (52.75%), Query Frame = 2
Query: 44 GRMMSEDEEEETKLL---ARSNGNPNDGGDHIVQ-PHQSAARDATQWRVSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGGSLSENKKILACVICGSFMLSALLSLRLLGWKETAPGSRRRRYSDLRNQGELEGG---NESFSGGIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYNYFDYRFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAEGSAALVFVQVFAAGSSA------GF--PEAPFYLAAGVSLIGLVTAWSPLRKRNKMQLKSINAEDSVADEGSSDEFSVEWADMEAGGRRGAEAPDSGDQDENGLVGNTKQFLSDDECPVVDDGGTVETTPAPIASIVSVPDTMEGGNMGTALMKVAPAAVVSAARRFEE--DEHQTGDELTQPLL 1846
G + E+++ E LL + +DGG P D + R+S+C+FL+ G + ++Q+ PKVVLE + D+ +AS+F GWLT+ +VQ IP L G SD +GRRA+++GAL L + F+L ++ ++ V VC ++G+A I P+ QAV+ID++ + +HGLGLI AA G A SVG + GGSL+E+ AC + S + +LSL+ GW+ETAP + QG GG N S GG A R +N S+LKVFLES LL+++A CF +SLNVF YNYFD+R+HW+PL+IS FF+ + LAL S IR LVP+R+S G L G++LQ S+ +FGL S+GWM Y L VLQ +TEPC+Q +MA V D+QG LQGAV LR +++G A +++ Q+F+ G S GF P P + A+G L AW LRK E AD S+ +D+EA +E+G++ + ++D TPA +S +GG G P A++ A R DE T ++++PLL
Sbjct: 5 GNVQGEEQDAENALLLDGTAATTTASDGGAAATSVPRGLTKGDRVRRRLSVCLFLHIVGVAIISQVYPKVVLEHFDHDNGEASRFTGWLTLVSCIVQLIAIPTLCGASDVIGRRAILAGALALTAVSSFSLGLAPSSIAVVSVCQVVSGVANAILPISQAVVIDLSHWGAAAGGGEVTHGLGLIGAAFGLAVSVGPVLGGSLTEDHAGTACWLSASMSVLGVLSLKFFGWEETAPAA---------TQGA--GGATANASAGGGWKKLCA----RGSSSRIVNPFSVLKVFLESSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLFFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSTRVENALGFVLPGLPLFCASGCGATALTIAWYALRKAG---------ETGAADPKST----ANPSDVEA--------------EEDGMMASNTVDVTDSST----------ATPAEDSS-------GDGGRSGKEAPAANPTALMQPASRVTGLGDEEDTMSDMSEPLL 563
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: A0A522Z5B0_9BACT (MFS transporter n=1 Tax=bacterium TaxID=1869227 RepID=A0A522Z5B0_9BACT) HSP 1 Score: 111 bits (278), Expect = 2.280e-22 Identity = 108/447 (24.16%), Postives = 184/447 (41.16%), Query Frame = 2
Query: 143 QSAARDATQWRVSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGG---SLSENKKILACVICGSFMLSALLSLRLLGWKETAPGSRRRRYSDLRNQGELEGGNESFSGGIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYN-YFDYRFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAEGSAALVFVQVFAAGSSAGFPEAPFYLAAGVSLIGLVTAWSPLRKRNKMQL 1471
+S +R A + + I L G + +LP V L ++ D S+ G + + +QF P L +SD GRR ++ G+LL +A + L + + I+GL V + M D+++D + A+ G+I A GF +G + GG +L LA + S L GW + ++ RRR P SLN + + L + YF ++ + + Y + +F WTP ++ + S+A+A G+ L+ ++ FG++ S +F + +GWM+YP + L +T P LQ+++AR V ++QG LQG+++S+ LA A L+F ++F + P AP Y L V W L R ++
Sbjct: 2 KSPSRTAAVRFIFITILLDAIGLGVIIPVLPDV-LRRFTSDPTTVSERFGLFVGTYAFMQFVASPVLGALSDRWGRRPILLGSLLGAGFDYLFMAFA-PTLPLLFLGRVISGLTGASLTVASSYMADISDDKTRAAN------FGMIGAGWGFGFILGPMLGGLLGALGPKAPFLAAAVLNSLNF-------LYGWLV-----------------------------LPESLTPARRRHVPLSSLNPLKSIARILRPSAFRPLVAIYFLVFLAGQIHPVNWTLYTETKFGWTPWQVGLSLSFVGVSIAVAQG-GLTRLIVPKLGAARSLTFGLAAYAVSFALFAVVWRGWMMYPVVALFSLSGVTMPSLQSLLARHVPPERQGELQGSLVSMGALASILAPLLFTRLFVHFTR---PGAPVYFPGAAYLGASVICWGTLAFRTAAEV 400
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: A0A2E2JXG9_9RHOB (Tetracycline resistance MFS efflux pump n=1 Tax=Rhodovulum sp. TaxID=34009 RepID=A0A2E2JXG9_9RHOB) HSP 1 Score: 110 bits (274), Expect = 7.950e-22 Identity = 109/433 (25.17%), Postives = 186/433 (42.96%), Query Frame = 2
Query: 176 VSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGGSLSE-NKKILACVICGSFMLSALLSLRLLGWKETAPGSRRRRYSDLRNQGELEGGNESFSGGIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYNYFD-YRFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAEGSAALVFVQVFAAGSSAG----FPEAPFYLAAGVSLI-GLVTAWSPLRK 1453
+ + + + G + ++P ++ D +KA+ + G + S +V+QF F P L +SD GRR V+ + + L +A++ V +++ I G+ A + D++ A GL AA G +G + GG+L E + + G L+AL +L +ET RRR+S LR + + RR N + +L + F + + V+ + + YF +RF W+P I A+ S+AL G+ ++ R + + + G+ + + + V+ + + GW+ F L + +P LQ +MAR VT+D+QG LQGA+ S+R +A + LV Q F + G P A F LAA + I W P RK
Sbjct: 8 IFITLVINAMGIGVILPVMPDLIQSVGGFDLSKAAAWGGVMATSFAVMQFLFSPLLGNLSDCFGRRPVLLFSQVFMALDYLLMALAWSMPV-LLIARFIGGITAATPATASAFLADISPPEQKTAR------FGLAGAAFGLGFVLGPLIGGALGELDPRAPFFAAAGLSALNALFGYLVL--QETVDDKIRRRFSLLR------------ANPVGALLHVGRRH-------NMLGLLFII-------------FLYEFAFFVYPSTWAYFTKFRFGWSPTAIGLSLMAFGLSMALMQG-GLIRVILRFLGSKWTAMLGLVVNIIAFVLLAVTTNGWVALALTPFAALGAIVDPALQGVMARRVTDDQQGELQGAITSMRSIAMALSPLVMTQTFTHFTKDGAPIVLPGAAFALAAILMTICACAFMWDPCRK 398
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: A0A437MZ47_9SPHI (MFS transporter n=1 Tax=Mucilaginibacter limnophilus TaxID=1932778 RepID=A0A437MZ47_9SPHI) HSP 1 Score: 101 bits (252), Expect = 5.340e-19 Identity = 110/439 (25.06%), Postives = 183/439 (41.69%), Query Frame = 2
Query: 155 RDATQWRVSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGGSLSE-NKKILACVICGSFMLSALLSLRLLGWKETAPGSRRRRYSDLRNQGELEGGNESFSGGIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYNYFD-YRFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAEGSAALVFVQVF----AAGSSAGFPEAPFYLAAGVSLIGLVTAWSPLRK 1453
R A + + + G S + PK++ + HG+ + AS + GWL + + +QF F P + +SD GRR V+ +LL + LA + + + + IAG+ A + DV+E + + G+I A G +G I GG+L+E N + G ++AL +L E+ + RR + R N + LK + ++ +A S F + + + +F Y+F WT + + AL IR +P+ + + G+ L V+FGL +KGWM++ L L + P LQ IM+ V++++QG LQG + SL L+ A + +F G+ A P APF+L A + LI V A +K
Sbjct: 9 RPAALGFIFFTLLIDVIGLSITIPVFPKLIEKLIHGNLSDASYWSGWLLFTYAFMQFLFSPLIGNLSDKYGRRPVLLCSLLGFGIDYLFLAFA-PTIGWLFIGRIIAGITGASFTTASAYIADVSEP------EKRAQNFGMIGVAFGLGFIIGPIIGGNLAEFNPQYPFFAAAGLAFINALYGFFVL--PESLDKAHRRPFDIKR--------------------------------ANPIGTLKQLKKYPSVIGLAVSLFLVYFAGQAVQSVWTFFTMYKFKWTEGTVGWSLGFVGFMFALVQGGLIRITLPK-LGLQRSIWIGLLLYSIGLVLFGLATKGWMMFVFLIPYTLGGIAGPALQGIMSNEVSKNEQGELQGGLTSLMSLSSTFAPMTMSYLFYYFTKPGTPAHLPGAPFFLGALLMLISTVLAIRSFKK 405
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: A0A4Q5SGG0_9SPHI (MFS transporter n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q5SGG0_9SPHI) HSP 1 Score: 100 bits (248), Expect = 1.660e-18 Identity = 105/439 (23.92%), Postives = 183/439 (41.69%), Query Frame = 2
Query: 155 RDATQWRVSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGGSLSE-NKKILACVICGSFMLSALLSLRLLGWKETAPGSRRRRYSDLRNQGELEGGNESFSGGIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYNYFD-YRFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAE----GSAALVFVQVFAAGSSAGFPEAPFYLAAGVSLIGLVTAWSPLRK 1453
R A + + + + G + + PK++ + HG ++A+ + GWLT++ SV+QF F P + +SD GRR V+ +LL + LA + + + V IAG+ A + DV+E + + G+I A G +G + GG L + + G +L+AL +L E+ + RR + R N + LK + + +A S F + + + +F Y+F+W+ + + A+ IR +P+ + + G+ + V+FGL SKGWM++ L +L + P LQ IM+ V +++QG LQG + SL L+ + + +F G+ P APF+L A + L + A RK
Sbjct: 9 RTAALGFIFITLLIDVIGLGIIIPVFPKLIEKLIHGGLSEATYWSGWLTLAYSVMQFAFAPIIGNLSDKYGRRPVLLCSLLGFGIDYLFLAFA-PTIGWLFVGRIIAGITGASFTTASAYIADVSEP------EKRAQNFGMIGVAFGLGFIIGPVLGGLLGKYDTHYPFFAAAGLALLNALYGFFVL--PESLDKAHRRPFDITR--------------------------------ANPLGSLKQLAKYPSVFGLALSLFLVYFAGQAVQSVWTFFTMYKFNWSEDTVGYSLGTVGVLSAVVQGGLIRITIPK-LGLQRSIWIGLLMYSIGLVLFGLASKGWMMFAFLVPYILGGIAGPALQGIMSNEVPQNEQGELQGGLTSLMSLSAIFGPMTMSFIFYYFTKPGAPVNLPGAPFFLGAALMLASTILAIRSFRK 405
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: A0A7Y2CTK8_9RHOB (TCR/Tet family MFS transporter n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A7Y2CTK8_9RHOB) HSP 1 Score: 98.2 bits (243), Expect = 6.320e-18 Identity = 106/428 (24.77%), Postives = 184/428 (42.99%), Query Frame = 2
Query: 176 VSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGGSLSENKKILACVICGSFMLSALLSL--RLLGW---KETAPGSRRRRYSDLRNQGELEGGNESFSGGIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYNYFDY-RFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAEGSAALVFVQVFAAGSSAG----FPEAPFYLAAGVSLIGLV 1429
+ L + + G + ++P ++ E G A A+ + G L+ S +++QF F P + G+SD GR+ V+ +LL+ +A++ ++ ++ + G+ A M D+ A + + GLI AA G +G + GG+L+E F +A+L+ +LGW +ET R+R + R R P +L + L + L+ YF + V+ V+ + + +F RF W P I A + ++AL + G+ V E + G + + S ++ L + G ++ L + P LQ IM+R V ++ QG LQGA+ S LA + L FA + AG P APF +A G+S++GL+
Sbjct: 9 IMLTVMIDAMGIGLMVPVMPDLIREVRGGSLADAALWGGVLSTSFAIMQFLFSPIIGGLSDRYGRKPVLLTSLLVMAADYVVMALA-GSIWLLLAGRVVGGITAATQSTASAYMADI------TAPEERTKNFGLIGAAFGAGFVLGPLIGGTLAEYGTR------APFWAAAVLASGNAVLGWIVVRETITKDRQRPF--------------------------RLGRANPWGALKQLGKLPGVRQLLLV------YFLYHVAFAVYPSVWAFFGQERFAWPPAMIGASLALFGLTMALVQA-GLIRAVLIWFGERGTVVVGFAFAIVSYLLISLITSGTIVLALTPLAALAGIIPPALQGIMSRRVADNAQGELQGALTSATSLAMILSPLAMTATFATFTEAGAPIYLPGAPFMVACGLSVLGLI 390
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: UPI001B1D9DD9 (TCR/Tet family MFS transporter n=1 Tax=bacterium TaxID=1869227 RepID=UPI001B1D9DD9) HSP 1 Score: 94.0 bits (232), Expect = 1.640e-16 Identity = 103/422 (24.41%), Postives = 176/422 (41.71%), Query Frame = 2
Query: 176 VSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGGSLSENKKILACVICGSFMLSALLSLRLLGWKETAPGSRRRRYSDLRNQGELEGGNESFSGGIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYNYF-DYRFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAEGSAALVFVQVFAAGSSAG----FPEAPFYLAAGVSLIGL 1426
+ + + L G V + P++V + GD + AS+++G + +QF P L +SD GR+ ++ +L+ +L + + NL + + G+A V A + DV+ A + + G++ AA G +G GG+L L F +SA +SL + A + ++ RR N +S + + + ++ +ATS ++ + + F RF W+P E A + L IR ++P+ + E L+G+ L S V+FGL SKGWM+Y L + P Q +++R + D+QG +QGA+ SL L +V Q+FA ++A P F+L G LIGL
Sbjct: 4 IFITVLLDIIGIGIVIPITPQLVSQFVGGDLSDASRYYGPAIALYTAMQFLCAPTLGALSDRFGRKPILLLSLVGTSLA-YLMTAFAPNLAWLYAARMLGGVAGASMTVASAYIADVS------APERRAQNFGMLGAAFGIGFIIGPALGGALGHFSLHLP------FFVSAAVSLINFVYGLVA---------------------------LPESHRLENRRAFTWAKANPLSFVPLLRKYPQIMGMATSLLLVGLAQQCQQSNWVLFTSLRFKWSPAESGVSLALAGLCMVLVQGGLIRLVLPK-LGERRAILYGLVLFGGSMVLFGLASKGWMMYAVTVVSSLSAIAGPATQGLISRQIGPDEQGAVQGALTSLTSLTGIVGPVVANQLFATFTAASAPVKIPGIAFFL--GALLIGL 382
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: A0A2S0MQG5_9RHOB (TCR/Tet family MFS transporter n=1 Tax=Pukyongiella litopenaei TaxID=2605946 RepID=A0A2S0MQG5_9RHOB) HSP 1 Score: 90.1 bits (222), Expect = 2.800e-15 Identity = 104/424 (24.53%), Postives = 178/424 (41.98%), Query Frame = 2
Query: 176 VSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGGSLSE-NKKILACVICGSFMLSALLSLRLLGWKETAPGSRRRRYSDLRNQGELEGGNESFSGGIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYNYFDY-RFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAEGSAALVFVQVFAA----GSSAGFPEAPFYLAAGVSLIGLV 1429
+ + + L G + ++P ++ E + GD A A+ + G L+ +V+QF F P + +SD GRR V+ +L L +A++ ++ ++ + G+ A M D++E A+ GL+ A G +G + GG L E + L+ + L ++G ET RR ++ R + SG A +R +P L++ YF + V+L V+ A + YF RF W I + ++AL G+ +V R E ++G + + + + G + L + P LQ IMAR V++D QG LQG + S+ L+ + L+ VFAA G+ P APF +A + ++GLV
Sbjct: 8 ILVTVMLDAMGIGLIMPIMPDLIREVHGGDLANAAIWGGVLSTVFAVMQFLFSPVVGNLSDRFGRRPVLLVSLAAMALDYLVMALA-GSIWLLLAGRIVGGVTAATHATANAYMADLSEPHEKAAN------FGLVGAGFGIGFVLGPLVGGLLGEWGTRAPFHAAAALSALNFVFGLLVMG--ETVTDRTRRAFTWARA---------NPSGSF--RAVARLPGLKPLLAV---------------------YFIYSVALYVYPAIWAYFTQERFGWGAQMIGLSLGLFGIAMALVQG-GLIRVVLRHFGERFAVIWGQVIDGVAMAGLTVITSGTLALILTPLSALGAVAAPALQGIMARRVSDDAQGELQGVLNSVHALSMIVSPLLMAWVFAAFTGNGAPVYLPGAPFLVALVLLVLGLV 389
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Match: A0A7Z2W0U1_9BURK (TCR/Tet family MFS transporter n=1 Tax=Duganella sp. GN2-R2 TaxID=2728020 RepID=A0A7Z2W0U1_9BURK) HSP 1 Score: 87.0 bits (214), Expect = 3.480e-14 Identity = 102/431 (23.67%), Postives = 169/431 (39.21%), Query Frame = 2
Query: 176 VSLCIFLYTCGSSAVTQLLPKVVLEQYHGDDAKASKFHGWLTVSVSVVQFFFIPALSGVSDNVGRRAVISGALLLHTLGVFTLAVSHDNLVSVIVCHTIAGLATVITPVCQAVMIDVAEDSSGVADDTASHGLGLILAAVGFANSVGDIFGGSLSENKKILACVICGSFMLSALLSLRLLGWKETAPGSRRRRYSDLRNQGELEGGNESFSGGIDDAAASRRRRTRPKLSLNCVSILKVFLESRLLLRIATSYFCFIVSLNVFGAGYNYFDYRFHWTPLEISFFFAAYNSSLALASSWGIRHLVPRRISEEHGGLFGISLQVCSSVIFGLCSKGWMLYPALEFGVLQIMTEPCLQAIMARFVTEDKQGGLQGAVMSLRVLAEGSAALVFVQVFAAGSSAGFPE------APFYLAAGVSLIGLVTAWSPLR 1450
V +C+F+ G + +LP +V E HG + +A F G L +++QF +P + SD +GRR V+ ++ + A++ NL + + + G ++ V A DV+ A + + G + AA G G + GG L L + + + +A + E+ P RR + R AA R R R L V L F + + + Y +RF WTP E + L + + L+ RR E L G+S C+ +++GL ++GWMLY + +L P LQ I+++ +QG L G++ S+ L G + V G+ P + FYL A + ++ AW LR
Sbjct: 18 VLICVFIDLLGVGLIVPVLPALVGEYAHGREQQALWF-GILAAVWALMQFLCMPVIGMASDRLGRRPVLLYSMAGMCAAFLSTALA-PNLAWLFLGRVLGGASSASMAVASAYAADVS------APEERAKNFGKVGAAFGLGFICGPVLGGLLGNVGLHLPFYVAAA-LAAANFVYGAVAVPESLPAERRAPFRLARLN--------------PFAALLRLLRRRDVRGLVAVYTLVSFAQ-----------------MTLQATFVLYSSFRFGWTPRENGVALCCVGLTSFLVQARLLGPLI-RRFGERRLALAGMSSGACAFLLYGLATRGWMLYAIILCNLLSFAVVPTLQGILSKDAAPREQGELMGSLQSIASL--GLIVMPLVGTRILGAVGHLPPQDWRIGSSFYLCAAMQAAAILAAWRVLR 405 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig536.12780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig536.12780.1 >prot_H-paniculata_contig536.12780.1 ID=prot_H-paniculata_contig536.12780.1|Name=mRNA_H-paniculata_contig536.12780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=607bp MMSEDEEEETKLLARSNGNPNDGGDHIVQPHQSAARDATQWRVSLCIFLYback to top mRNA from alignment at H-paniculata_contig536:22338..35327- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig536.12780.1 ID=mRNA_H-paniculata_contig536.12780.1|Name=mRNA_H-paniculata_contig536.12780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12990bp|location=Sequence derived from alignment at H-paniculata_contig536:22338..35327- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig536:22338..35327- >mRNA_H-paniculata_contig536.12780.1 ID=mRNA_H-paniculata_contig536.12780.1|Name=mRNA_H-paniculata_contig536.12780.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3642bp|location=Sequence derived from alignment at H-paniculata_contig536:22338..35327- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |