mRNA_H-paniculata_contig5331.12741.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: D8LHF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF4_ECTSI) HSP 1 Score: 149 bits (377), Expect = 5.570e-42 Identity = 101/191 (52.88%), Postives = 121/191 (63.35%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDSFSRNNA---YPAESLDQSAHVADSRNRHEDPEASPERSGTG--DHNSSAARVE--EKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLTTDLSHKE 552
QHQAHGTSLGAV ATGAAGS+AYAL+GHVDY+AA A+A+ GMA AH AR TA + + LK+ALGVLM+AVAPL+PLRD S N P+ + D A TG D E E SP++ V S+ + M AIG GSGFLAGVFGVGGGV+TVP++SL TDL HK+
Sbjct: 34 QHQAHGTSLGAVFATGAAGSTAYALAGHVDYQAAGAIAVAGMAAAHAGARCTAGVDGNSLKMALGVLMLAVAPLVPLRDKLSHNKGPCLRPSTAADDIAXXXXXXXXXXXXXXXXXXEATGLLDGGGLIPMEEGGEGTSPSVPGVSSERVTT--MLAIGAGSGFLAGVFGVGGGVLTVPSVSLATDLGHKK 222
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: A0A6H5JLQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ9_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.530e-41 Identity = 104/191 (54.45%), Postives = 124/191 (64.92%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDSFSRNNAYPAESLDQSAHVADSRNRHEDPEASPERSGT-------GDHNSSAARVEEKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLTTDLSHKE 552
QHQAHGTSLGAV ATGAAGS+AYAL+GHVDY+AA A+A+ GMA AH AR TA + + LK+ALGVLM+AVAPL+PLRD S + D S + RHE E S ERS G E SP++ V S+ + M AIG GSGFLAGVFGVGGGV+TVP++SL TDL HK+
Sbjct: 118 QHQAHGTSLGAVFATGAAGSTAYALAGHVDYQAAGAIAVAGMAGAHAGARCTAGVDGNSLKMALGVLMLAVAPLVPLRDKLSHKD-------DVSV-----KERHE--EESEERSSADATGLQGGGRLLPTEAGGEGTSPSVPGVSSERVTT--MLAIGAGSGFLAGVFGVGGGVLTVPSVSLATDLGHKK 292
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: A0A836CP97_9STRA (Sulfite exporter TauE/SafE-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP97_9STRA) HSP 1 Score: 117 bits (293), Expect = 8.110e-29 Identity = 81/187 (43.32%), Postives = 106/187 (56.68%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDS---FSRNNAYPAESLDQSAHVADSRNRHEDPEASPERSGTGDHNSSAARVEEKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLTTDLSHKE 552
QHQAHGTSLGAV ATGAAG++ +A +G VD+ A M + GM + + A+AT R+ S LK LGV MI +AP++ RD ++ + E L H +P S + G G E K ++V+ + M+AIG SGFLAG+FGVGGG VTVPAISL TD +HKE
Sbjct: 17 QHQAHGTSLGAVCATGAAGAAGFAAAGQVDWMALPPMVVAGMVTSTLGAKATGRLKQSTLKRMLGVFMIGIAPVVIFRDQLLEYAHRPVHGEEPL------------HSNPNPSNQLGGAGGDGGG----EHKAVVATAAVERPSSDPLRMAAIGACSGFLAGIFGVGGGAVTVPAISLCTDFTHKE 187
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: A0A7S0C0G1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0G1_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.460e-23 Identity = 71/182 (39.01%), Postives = 98/182 (53.85%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDSFSRNNAYPAESLDQSAHVADSRNRHEDPEASPERSGTGDHNSSAARVEEKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLTTDLSH 546
QHQAHGTSL AV ATG AG+ Y + VD +AA +A+GGM A + A AT+++SP LK ALG+ MI V+P+LP + + N G D + +K S S + + + ++ IGLGSGFLAG+FGVGGG V VPA+++ TD++H
Sbjct: 127 QHQAHGTSLFAVAATGMAGALGYGFADVVDIDSAAGLALGGMITARLGAGATSKLSPQALKRALGIFMILVSPVLPAKQYIADNFG-----------------------------GINDGTETTQNAIQKESND--SYEERLTKVLPIACIGLGSGFLAGMFGVGGGAVVVPALTIATDMNH 277
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: B7G9A3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9A3_PHATC) HSP 1 Score: 90.5 bits (223), Expect = 9.520e-18 Identity = 75/184 (40.76%), Postives = 99/184 (53.80%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDSFSRNNAYPAESLDQSAHVADSRNRHEDPEASPERSGTGDHNSSAARVEEKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLTTDLSHKE 552
QHQAHGTSL AV ATG AG+ +Y V + +AAA+A+ GM A + A T R S + L+ ALGVLM+ +AP +P + AY L Q A + A+R E + P S S+ L +AIGLGSGFLAG+FGVGGG + VPA++L TD +H +
Sbjct: 85 QHQAHGTSLFAVSATGVAGAWSYVH--EVQWESAAAIALCGMVTARMGAHVTTRTSATTLRKALGVLMLLMAPAVPAK-------AY----LTQRAEATE-----------------------ASRAEAETMP--SEPLSRFLPP---AAIGLGSGFLAGLFGVGGGTIVVPALTLATDCTHYQ 227
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: A0A8J5XLZ6_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XLZ6_DIALT) HSP 1 Score: 84.7 bits (208), Expect = 2.660e-16 Identity = 64/183 (34.97%), Postives = 93/183 (50.82%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDSFSRNNAYPAESLDQSAHVADSRNRHEDPEASPERSGTGDHNSSAARVEEKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLTTDLSHK 549
QH AHGTSL AV++TG G ++A G VD+ AAAA+A A ARAT+R+S + LK +GV M+AVAPL+PL+ RS G + AA E+ + S++ + +A+G+ SG L+G+FGVGGG + PA++ D+ H+
Sbjct: 93 QHAAHGTSLVAVVSTGLGGCVSFASHGQVDWPAAAAIAATASLSAVAGARATSRLSGATLKRLMGVFMMAVAPLVPLKGYLQH------------------------------RSSAGGERTCAADAEQHAPLSYSALA-------QCAAVGVFSGALSGMFGVGGGSIVTPALAFIADMPHQ 238
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: A0A7S1VQG5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQG5_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 5.600e-16 Identity = 71/192 (36.98%), Postives = 94/192 (48.96%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYR------AAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDSFSRN--NAYPAESLDQSAHVADSRNRHEDPEASPERSGTGDHNSSAARVEEKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLTTDLSHKE 552
QHQAHGTSL AV ATG AG+ YA SG D+ +AAA+A GM A + A T ++ L+ ALGV MI VAPL+P R + + PA+ D + +K + G AIGLGSG+LAG+FGVGGG + VPA++L TD++H +
Sbjct: 75 QHQAHGTSLFAVAATGIAGALGYA-SGEGDFNDVVQWDSAAAIAACGMLTARLGAYTTVHLTEKFLQQALGVFMIGVAPLIPARAWTLKQAKSTQPADEYD--------------------------------------------IYTKIVVPG---AIGLGSGYLAGLFGVGGGAIVVPALALGTDMNHYQ 218
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: A0A812LAW2_9DINO (YunE protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812LAW2_9DINO) HSP 1 Score: 83.2 bits (204), Expect = 1.180e-15 Identity = 66/180 (36.67%), Postives = 97/180 (53.89%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDSFSRNNAYPAESLDQSAHVADSRNRHEDPEASPERSGTGDHNSSAARVEEKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLTTDL 540
QH A G+SL VL TG++G+ Y G +DY A A+A+GGM A A+ A + LKL +G+L +AV+PL+PL+ FS++ E ++ V S + EA R+G G + A + +M +G +GFL+G+FGVGGG +TVPAI+L+T L
Sbjct: 86 QHLATGSSLAVVLMTGSSGAFGYIRHGQIDYEVALAIALGGMIFARAGAKLMANTDAARLKLYMGMLQVAVSPLIPLKAHFSKSRPATEEKRVEAPCVDGSESILAGSEA---RAGHGVFD--------------------AERFAKMFVVGSLAGFLSGMFGVGGGALTVPAIALSTSL 242
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: A0A7S3DRW2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DRW2_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.400e-15 Identity = 68/184 (36.96%), Postives = 97/184 (52.72%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDSFSRNNAYPAESLDQSAHVADSRNRHEDPEASPERSGTGDHNSSAARVEEKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLTTDLSHKE 552
QHQAHGTSL AV ATG AG+ +Y S V + A+A+A+ G+ A + AR+ +++S LK ALG+LM+ +AP + + L Q+ ++ N H+ + S + GD R+ SAIGL SG+LAG+FGVGGGV+ VPA++L T H E
Sbjct: 90 QHQAHGTSLFAVTATGLAGAWSYKDS--VRFEEASAIALTGIFTARLGARSASQLSEKALKRALGMLMVTMAPAVHAKQYI----------LQQTVTISTESNEHDSDDTS---TSIGDETILWKRI------------------APASAIGLCSGYLAGLFGVGGGVLVVPALTLFTGCDHYE 240
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Match: A0A1Z5JLU8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLU8_FISSO) HSP 1 Score: 78.6 bits (192), Expect = 5.740e-14 Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 1
Query: 1 QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARATARISPSILKLALGVLMIAVAPLLPLRDSFSRNNAYPAESLDQSAHVADSRNRHEDPEASPERSGTGDHNSSAARVEEKRSPTISSVKSKALQKGEMSAIGLGSGFLAGVFGVGGGVVTVPAISLT 531
QHQAHGTSL AV+ATG AG+ +Y HVD+ AA +A M A + A+ T +S LK ALGVL++ + P +P + ++Q +H+ +N E G+ N + + T +++S + ++IGL SG+LAG+FGVGGG + VPA+ T
Sbjct: 101 QHQAHGTSLAAVMATGLAGAVSY--QDHVDFAAAGPLAAAAMLTASLGAKTTTFLSEKWLKRALGVLLLVMGPAVPAKQHI----------VEQYSHLHHPQNTME-----------GEENYATS--------TSHNIESSYPKWVAPASIGLCSGYLAGLFGVGGGTLVVPALLFT 246 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5331.12741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5331.12741.1 >prot_H-paniculata_contig5331.12741.1 ID=prot_H-paniculata_contig5331.12741.1|Name=mRNA_H-paniculata_contig5331.12741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp QHQAHGTSLGAVLATGAAGSSAYALSGHVDYRAAAAMAIGGMAKAHVDARback to top mRNA from alignment at H-paniculata_contig5331:6627..14215+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5331.12741.1 ID=mRNA_H-paniculata_contig5331.12741.1|Name=mRNA_H-paniculata_contig5331.12741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7589bp|location=Sequence derived from alignment at H-paniculata_contig5331:6627..14215+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5331:6627..14215+ >mRNA_H-paniculata_contig5331.12741.1 ID=mRNA_H-paniculata_contig5331.12741.1|Name=mRNA_H-paniculata_contig5331.12741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1104bp|location=Sequence derived from alignment at H-paniculata_contig5331:6627..14215+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |